Metagenome / Metatranscriptome Family F077708

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077708
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	52 residues
Representative Sequence	VSHTKQPLHNMTAINRYAKICKWLNKWIVLVVFAVIILVTAAIAAFVSFAVPLLR
Number of Associated Samples	65
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	17.95 %
% of genes near scaffold ends (potentially truncated)	24.79 %
% of genes from short scaffolds (< 2000 bps)	73.50 %
Associated GOLD sequencing projects	59
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (70.085 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil (29.915 % of family members)
Environment Ontology (ENVO)	Unclassified (63.248 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (87.179 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.04% β-sheet: 0.00% Coil/Unstructured: 40.96%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF04545	Sigma70_r4	31.90
PF07963	N_methyl	25.86
PF13544	Obsolete Pfam Family	6.90
PF10590	PNP_phzG_C	2.59
PF01243	Putative_PNPOx	2.59
PF03807	F420_oxidored	1.72
PF13561	adh_short_C2	0.86
PF08734	GYD	0.86
PF13432	TPR_16	0.86
PF07040	DUF1326	0.86
PF13610	DDE_Tnp_IS240	0.86
PF00589	Phage_integrase	0.86
PF00476	DNA_pol_A	0.86
PF14534	DUF4440	0.86
PF04632	FUSC	0.86
PF02518	HATPase_c	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	Replication, recombination and repair [L]	0.86
COG1289	Uncharacterized membrane protein YccC	Function unknown [S]	0.86
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.86
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
All Organisms	root	All Organisms	29.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
cellular organisms	root	All Organisms → cellular organisms	29.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	29.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.27 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.71 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.85 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.71 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.71 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.85 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.85 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.71 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.85 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.85 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.71 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.85 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.85 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.71 %
Deltaproteobacteria bacterium HGW-Deltaproteobacteria-15	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium HGW-Deltaproteobacteria-15	0.85 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.85 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001648\|JGI20242J16303_106931	Not Available	559	Open in IMG/M
3300002245\|JGIcombinedJ26739_101828184	Not Available	509	Open in IMG/M
3300003219\|JGI26341J46601_10001272	All Organisms → cellular organisms → Bacteria	8153	Open in IMG/M
3300003219\|JGI26341J46601_10012710	Not Available	2760	Open in IMG/M
3300003219\|JGI26341J46601_10019216	Not Available	2241	Open in IMG/M
3300003219\|JGI26341J46601_10074512	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300003219\|JGI26341J46601_10084617	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300003219\|JGI26341J46601_10103469	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300003219\|JGI26341J46601_10172173	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300003219\|JGI26341J46601_10193160	Not Available	555	Open in IMG/M
3300003368\|JGI26340J50214_10008956	Not Available	3210	Open in IMG/M
3300003368\|JGI26340J50214_10012574	Not Available	2663	Open in IMG/M
3300003368\|JGI26340J50214_10047254	All Organisms → cellular organisms → Bacteria	1205	Open in IMG/M
3300003368\|JGI26340J50214_10092107	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300003368\|JGI26340J50214_10141005	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300003368\|JGI26340J50214_10170707	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300003505\|JGIcombinedJ51221_10365324	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300003505\|JGIcombinedJ51221_10410321	Not Available	549	Open in IMG/M
3300004152\|Ga0062386_100013091	All Organisms → cellular organisms → Bacteria	5934	Open in IMG/M
3300004152\|Ga0062386_100113249	Not Available	2093	Open in IMG/M
3300005602\|Ga0070762_11129114	Not Available	541	Open in IMG/M
3300006052\|Ga0075029_100259467	Not Available	1100	Open in IMG/M
3300006102\|Ga0075015_100337171	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300006172\|Ga0075018_10606039	Not Available	583	Open in IMG/M
3300006174\|Ga0075014_100288663	Not Available	861	Open in IMG/M
3300006176\|Ga0070765_101381990	Not Available	664	Open in IMG/M
3300006176\|Ga0070765_101658939	Not Available	601	Open in IMG/M
3300006893\|Ga0073928_10096211	All Organisms → cellular organisms → Bacteria	2495	Open in IMG/M
3300009698\|Ga0116216_10556999	Not Available	692	Open in IMG/M
3300009700\|Ga0116217_10390680	Not Available	884	Open in IMG/M
3300010339\|Ga0074046_10037128	Not Available	3294	Open in IMG/M
3300010339\|Ga0074046_10093785	All Organisms → cellular organisms → Bacteria	1941	Open in IMG/M
3300010339\|Ga0074046_10288511	Not Available	1011	Open in IMG/M
3300010339\|Ga0074046_10829311	Not Available	540	Open in IMG/M
3300010341\|Ga0074045_10085022	Not Available	2209	Open in IMG/M
3300010341\|Ga0074045_10839041	Not Available	580	Open in IMG/M
3300010341\|Ga0074045_10884952	Not Available	563	Open in IMG/M
3300010341\|Ga0074045_10920009	Not Available	551	Open in IMG/M
3300010343\|Ga0074044_10057468	Not Available	2654	Open in IMG/M
3300010343\|Ga0074044_10057468	Not Available	2654	Open in IMG/M
3300010343\|Ga0074044_10075119	Not Available	2286	Open in IMG/M
3300010379\|Ga0136449_100362636	Not Available	2596	Open in IMG/M
3300010379\|Ga0136449_101030861	All Organisms → cellular organisms → Bacteria	1320	Open in IMG/M
3300012202\|Ga0137363_11073909	Not Available	684	Open in IMG/M
3300012923\|Ga0137359_11672750	Not Available	524	Open in IMG/M
3300014164\|Ga0181532_10745880	Not Available	526	Open in IMG/M
3300014199\|Ga0181535_10159911	Not Available	1406	Open in IMG/M
3300016422\|Ga0182039_11642964	Not Available	587	Open in IMG/M
3300020579\|Ga0210407_10650703	Not Available	819	Open in IMG/M
3300020580\|Ga0210403_10073031	Not Available	2757	Open in IMG/M
3300020580\|Ga0210403_10394531	Not Available	1130	Open in IMG/M
3300020580\|Ga0210403_10593994	Not Available	894	Open in IMG/M
3300020581\|Ga0210399_10047556	Not Available	3445	Open in IMG/M
3300020581\|Ga0210399_10051500	All Organisms → cellular organisms → Bacteria	3308	Open in IMG/M
3300020583\|Ga0210401_10994878	Not Available	697	Open in IMG/M
3300021088\|Ga0210404_10264059	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300021168\|Ga0210406_10459561	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300021171\|Ga0210405_10017860	All Organisms → cellular organisms → Bacteria	5799	Open in IMG/M
3300021171\|Ga0210405_10165350	All Organisms → cellular organisms → Bacteria	1752	Open in IMG/M
3300021171\|Ga0210405_10296446	All Organisms → cellular organisms → Bacteria	1278	Open in IMG/M
3300021171\|Ga0210405_10512491	Not Available	939	Open in IMG/M
3300021405\|Ga0210387_11570121	Not Available	561	Open in IMG/M
3300021406\|Ga0210386_11373535	Not Available	593	Open in IMG/M
3300021432\|Ga0210384_10177682	Not Available	1913	Open in IMG/M
3300021478\|Ga0210402_10758883	Not Available	894	Open in IMG/M
3300021559\|Ga0210409_10562202	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300021559\|Ga0210409_11035558	Not Available	695	Open in IMG/M
3300022557\|Ga0212123_10030795	Not Available	5515	Open in IMG/M
3300024271\|Ga0224564_1035993	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300025320\|Ga0209171_10019202	Not Available	5512	Open in IMG/M
3300026817\|Ga0207775_110898	Not Available	703	Open in IMG/M
3300026824\|Ga0207723_106577	Not Available	957	Open in IMG/M
3300026845\|Ga0207760_107910	Not Available	897	Open in IMG/M
3300026927\|Ga0207744_1015745	Not Available	714	Open in IMG/M
3300027003\|Ga0207722_1034337	Not Available	549	Open in IMG/M
3300027024\|Ga0207819_1025494	Not Available	761	Open in IMG/M
3300027045\|Ga0207726_1018121	Not Available	1108	Open in IMG/M
3300027049\|Ga0207806_1028604	Not Available	640	Open in IMG/M
3300027069\|Ga0208859_1034548	Not Available	587	Open in IMG/M
3300027109\|Ga0208603_1031975	Not Available	825	Open in IMG/M
3300027516\|Ga0207761_1008947	Not Available	2276	Open in IMG/M
3300027698\|Ga0209446_1002036	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	4920	Open in IMG/M
3300027698\|Ga0209446_1004752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3343	Open in IMG/M
3300027703\|Ga0207862_1020330	Not Available	1981	Open in IMG/M
3300027812\|Ga0209656_10002638	All Organisms → cellular organisms → Bacteria	11593	Open in IMG/M
3300027812\|Ga0209656_10018313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4311	Open in IMG/M
3300027812\|Ga0209656_10056644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2187	Open in IMG/M
3300027812\|Ga0209656_10097668	Not Available	1548	Open in IMG/M
3300027812\|Ga0209656_10152982	All Organisms → cellular organisms → Bacteria → Proteobacteria	1154	Open in IMG/M
3300027812\|Ga0209656_10165076	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium HGW-Deltaproteobacteria-15	1098	Open in IMG/M
3300027812\|Ga0209656_10333731	Not Available	693	Open in IMG/M
3300027812\|Ga0209656_10427400	Not Available	589	Open in IMG/M
3300027824\|Ga0209040_10007433	All Organisms → cellular organisms → Bacteria	7905	Open in IMG/M
3300027824\|Ga0209040_10056901	Not Available	2332	Open in IMG/M
3300027824\|Ga0209040_10140770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1314	Open in IMG/M
3300027824\|Ga0209040_10372957	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	671	Open in IMG/M
3300027824\|Ga0209040_10424547	Not Available	611	Open in IMG/M
3300027824\|Ga0209040_10506027	Not Available	535	Open in IMG/M
3300027824\|Ga0209040_10525496	Not Available	520	Open in IMG/M
3300027825\|Ga0209039_10037036	Not Available	2300	Open in IMG/M
3300027825\|Ga0209039_10155220	Not Available	950	Open in IMG/M
3300027889\|Ga0209380_10139829	Not Available	1412	Open in IMG/M
3300027889\|Ga0209380_10373100	Not Available	837	Open in IMG/M
3300027910\|Ga0209583_10059203	Not Available	1373	Open in IMG/M
3300027911\|Ga0209698_10666500	Not Available	794	Open in IMG/M
3300027915\|Ga0209069_10216523	Not Available	983	Open in IMG/M
3300028047\|Ga0209526_10113260	Not Available	1907	Open in IMG/M
3300028047\|Ga0209526_10615093	Not Available	694	Open in IMG/M
3300029636\|Ga0222749_10058250	All Organisms → cellular organisms → Bacteria	1725	Open in IMG/M
3300031057\|Ga0170834_110068881	Not Available	540	Open in IMG/M
3300031708\|Ga0310686_100677202	Not Available	1111	Open in IMG/M
3300031708\|Ga0310686_110250173	Not Available	4679	Open in IMG/M
3300031708\|Ga0310686_112752192	Not Available	703	Open in IMG/M
3300031708\|Ga0310686_113112428	Not Available	1688	Open in IMG/M
3300032160\|Ga0311301_10360658	Not Available	2263	Open in IMG/M
3300032160\|Ga0311301_10763699	All Organisms → cellular organisms → Bacteria	1339	Open in IMG/M
3300032261\|Ga0306920_104052905	Not Available	531	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.83%
Aquatic	Environmental → Aquatic	40.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.83%
Freshwater	Environmental → Aquatic → Freshwater	31.62%
Sediment	Environmental → Aquatic → Sediment	5.98%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.56%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	31.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	30.77%
Loam	Environmental → Terrestrial → Soil → Loam	19.66%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.98%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.56%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	31.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.66%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	19.66%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.11%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.98%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.56%

Habitat	Taxonomy	Distribution
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	29.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.09%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	9.40%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.84%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.98%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.27%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.27%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.56%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001648	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300026817	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 17 (SPAdes)	Environmental	Open in IMG/M
3300026824	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 27 (SPAdes)	Environmental	Open in IMG/M
3300026845	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 24 (SPAdes)	Environmental	Open in IMG/M
3300026927	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 56 (SPAdes)	Environmental	Open in IMG/M
3300027003	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 26 (SPAdes)	Environmental	Open in IMG/M
3300027024	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 42 (SPAdes)	Environmental	Open in IMG/M
3300027045	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 40 (SPAdes)	Environmental	Open in IMG/M
3300027049	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 72 (SPAdes)	Environmental	Open in IMG/M
3300027069	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF002 (SPAdes)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027516	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20242J16303_1069312	3300001648	Forest Soil	MSGLSVSDTEHPLHNMTAINRYAKICQWLNKRILLVVFAVIVLVT
JGIcombinedJ26739_1018281841	3300002245	Forest Soil	VSHSKQPHNMTASKRYAKICKWLNKWIVLVLFALSILVAVAIAASVSFAVSLLH*
JGI26341J46601_100012726	3300003219	Bog Forest Soil	MTAINRYAKICXWLNKWIVLVVFALIILVTAAIAAFVSFAVPLLR*
JGI26341J46601_100127102	3300003219	Bog Forest Soil	MLGLFVSHTKQPLHNMTAINRYAKICKWLNKWIVLVVFAVIILVTAAIAAFVSFAVPLLR
JGI26341J46601_100192162	3300003219	Bog Forest Soil	VSDIKTTPRNVTVSDRHANICNWLNKWIVLVAIALIILATAAIAAFVSFAVALLP*
JGI26341J46601_100745122	3300003219	Bog Forest Soil	MSHTKQPLHNMTVINRHAKILKWFNKWILLVVFALIILMTAAIAAFVSFAVPLLR*
JGI26341J46601_100846172	3300003219	Bog Forest Soil	MLRLSVSHPKQPLHNMTAINRSAKICEWLNKWILLVVFALIILVTAAIAAFVSFAVPLLR
JGI26341J46601_101034693	3300003219	Bog Forest Soil	MLGLPVSHTKQPLHNMTAINRYAKICKWLNKWIVLVVFVVIILMTAAIAAFVSFAVPLLR
JGI26341J46601_101721732	3300003219	Bog Forest Soil	MLRLSVSHPKQPLHNMTAINRYAKICKWLNKWILLLVFALIILVTAAIAAFVSFAVPLLR
JGI26341J46601_101931601	3300003219	Bog Forest Soil	VSHTKQPLHNMTASNRSAKICEWLNKWILLVVFALIILVTAAIAAFVSFAVPLLR*
JGI26340J50214_100089563	3300003368	Bog Forest Soil	VSDFKTTPHNVTARDRHAKICNWLNKWIVLVAIALVILATAAIAAFVSFAVSLLR*
JGI26340J50214_100125745	3300003368	Bog Forest Soil	VSHTKQPLHNMTAINRYAKICKWLNKWIVLVVFAVIILVTAAIAAFVSFAVPLLR*
JGI26340J50214_100472543	3300003368	Bog Forest Soil	MLGLSVSHPKQPLHNMTAINRSAKICKWLNKWIVLVVFAVLILVTAAIAAFVSFAVPLLR
JGI26340J50214_100921072	3300003368	Bog Forest Soil	MTAINRYAKICKWLNKWIVLVVFALIILVTAAIAAFVSFAVPLLR*
JGI26340J50214_101410052	3300003368	Bog Forest Soil	VSHTKQPLHNMTVINRHAKIFKWFNKWILLVVFAFIILVTAAIAAFVSFAVPLLR*
JGI26340J50214_101707072	3300003368	Bog Forest Soil	NMTAINRYAKICKWLNKWIVLVVFVVIILMTAAIAAFVSFAVPLLR*
JGIcombinedJ51221_103653242	3300003505	Forest Soil	MLGLSVSDTEQPLHNMTAINRYAKICKWLNKRILLVVFAVIILVTAAIAAFVSFAVPLLR
JGIcombinedJ51221_104103211	3300003505	Forest Soil	MLGPAVSHAKQPLHNMTAINRYAKISKWLNKWIVLVVFAVIILVTAAIAAFVSFAVPLLR
Ga0062386_1000130918	3300004152	Bog Forest Soil	MTSINRSAKISKWLNKWIVLVVIALIILATAAIAAFVSLAVPLVR*
Ga0062386_1001132493	3300004152	Bog Forest Soil	LGLSVSHTKQPLHNMTAINRYAKICKWLNKWIVLVVIAVIALVTAAIAAFVSFAVPLLR*
Ga0070762_111291142	3300005602	Soil	VSHTKHPHNMTASKRDAKICKWLNKWIVLVLFALSILVAAAIAAFVSLAVSLLR*
Ga0075029_1002594672	3300006052	Watersheds	INRYAKICKWLNKWILLLVFALIILVPAAIAAFASFAVPLLH*
Ga0075015_1003371712	3300006102	Watersheds	VSHTKQPHNMIASKRYAKICKWLNKWIVLVLFALSILVAAAIAAFVSFAGSLLR*
Ga0075018_106060392	3300006172	Watersheds	MLGLSVSDTEQPLHNMTAINRYAKICQWLNKRILLVVFAVIILVTAAIAAFVSLAVPLLR
Ga0075014_1002886632	3300006174	Watersheds	MTASERYVKICKWLNKWIVLVLFALSILVAAAIAAFVSFAVSLLR*
Ga0070765_1013819902	3300006176	Soil	MTAIDRYAKICKWLNKWILLLVFALIILVTAAIAAFVSFA
Ga0070765_1016589391	3300006176	Soil	MTASKRYAKICKWLNKWIVLVLFALSILVAVAIAASVSFAVSLLH*
Ga0073928_100962112	3300006893	Iron-Sulfur Acid Spring	VSHPKQPLHNMTGINRYAKICQWLNKRILLVVFAVIILVTAAIAAFVSFAVPLLR*
Ga0116216_105569991	3300009698	Peatlands Soil	MTAINRYAKICKWLNKWIVLVLFAVIILVTAAIAAFVSFAVPLLR*
Ga0116217_103906803	3300009700	Peatlands Soil	TAINRYAKICQWLNKRILLVVFVVIILVTAAIAAFVSFAVPLLH*
Ga0074046_100371282	3300010339	Bog Forest Soil	VSDIKTTPRNVTVSDRHAKICNWLNKWIVLVAIALIILATAAIAAFVSFAVALLP*
Ga0074046_100937851	3300010339	Bog Forest Soil	HTKQPLHNMTASNRSAKICEWLNKWILLVVFALIILVTAAIAAFVSFAVPLLR*
Ga0074046_102885111	3300010339	Bog Forest Soil	RYAKICKWLNKWIVLVVFALIILVTAAIAAFVSFAVPLLR*
Ga0074046_108293111	3300010339	Bog Forest Soil	MLGLSVSHTKQPLHNMTASNRSAKICEWLNKWILLVVFALIILVTAAIAAFVS
Ga0074045_100850222	3300010341	Bog Forest Soil	VSDIKTTPRNVTVSDRHAKICNWLNKWIVPVAIALIILATAAIAAFVSFAVALLP*
Ga0074045_108390411	3300010341	Bog Forest Soil	AINRSAKICEWLNKWILLVVFALIILVTAAIAAFVSFAVPLLR*
Ga0074045_108849522	3300010341	Bog Forest Soil	GLSVSHTKQPLHNMTAINRYAKICKWLNKWIVLVLFAVIILVTAAIAAFVSFAVPLLR*
Ga0074045_109200092	3300010341	Bog Forest Soil	MLRLSVSHPKQPLHNMTAINRSAKICEWLNKWILLVVFALIILVTAAIAAFVSFAV
Ga0074044_100574683	3300010343	Bog Forest Soil	VSKRYAKICRWLNKWIVLVAFALVILATAAIAAFVSFAVSLLR*
Ga0074044_100574687	3300010343	Bog Forest Soil	VSDSKTTPHNVTMSNRHAKICNWLNKWIVLVAIALIILATAAIVAFVSFAVALLR*
Ga0074044_100751194	3300010343	Bog Forest Soil	MLGLAVPHPKQPPYNMTAINRYAKICKWLNKRILLVVFAVIILVTAAIAAFVSFAVPLLR
Ga0136449_1003626363	3300010379	Peatlands Soil	MTAINRYAKICKWLNKWILLLVSALIILVPAAIAAFVGFAVSLLR*
Ga0136449_1010308612	3300010379	Peatlands Soil	MTAINRYAKICKWLNKWILLLVFALIILVTAAIAAFVSFAVPLLH*
Ga0137363_110739093	3300012202	Vadose Zone Soil	VKICKWLNKRILLVVFAVIILVTAAIAALVSFAVPLLR*
Ga0137359_116727501	3300012923	Vadose Zone Soil	KICKWLNKWIVLVLCALSILVAAAIAAFVSFAVSLLR*
Ga0181532_107458802	3300014164	Bog	MNAISRSAKICKWLNKWILLVALVLIILATAAIVAFVSFAVSLLH*
Ga0181535_101599111	3300014199	Bog	GKRLIENRENLLSVSHTKQPLHNMNAISRSAKICKWLNKWILLVALVLIILATAAIVAFVSFAVSLLH*
Ga0182039_116429641	3300016422	Soil	NITASKRYAKICKWLNKWNVPAAFAFIILATAAIAAFASFAVYLMR
Ga0210407_106507031	3300020579	Soil	MSGLSVSDTEHPLHNMTAINRYAKICQWLNKRILLVVFAVIILVTAAIAAFVSFAVPLLR
Ga0210403_100730314	3300020580	Soil	MLGPSVSHPKQPLHNMTASERYAKICQWLNKRILLVVFAVIILVTAAIAAFVSFAVPLLR
Ga0210403_103945312	3300020580	Soil	MSDTKEPLHNMTGINRYSKICQWLNKRILLVVFAVIILVTAAIAAFVSFAVPLLR
Ga0210403_105939942	3300020580	Soil	VSHPKQPLHNMTGINRYAKIYQWLNKRILLVVFAVIILVTGAIAAFVSFAVPLLR
Ga0210399_100475562	3300020581	Soil	MLGLAVSHPKQPLHNMTGINRYAKIYQWLNKRILLVVFAVIILVTGAIAAFVSFAVPPLR
Ga0210399_100515005	3300020581	Soil	MTSSKRSAKICLWLNKWIVPVLFVLSILVAAAIAAFVSFAVSLLH
Ga0210401_109948781	3300020583	Soil	VSHPKQPLHNMTGINRYAKICQWLNKRILLVVFAVIILVTAAI
Ga0210404_102640592	3300021088	Soil	MSGLSVSDTEHPLHNMTAINRYAKICKWLNKRILLVVFAVIVLVTAAIAAFVSFAVPLLR
Ga0210406_104595612	3300021168	Soil	VSHPKQPLHNMTGINRYAKIYQWLNKRILLVVFAVIILVTGAIAAFVSFAVPPLR
Ga0210405_100178603	3300021171	Soil	VSDTEHPLHNMTAINRYAKICQWLNKRILLVVFAVIVLVTAAIAAFVSFAVPLLR
Ga0210405_101653502	3300021171	Soil	MLGLAVSHPKQPLHNMTGINRYAKIYQWLNKRILLVVFAVIILVTGAIAAFVSFAVPLLR
Ga0210405_102964462	3300021171	Soil	MLRLSVSHTKQPHNKTASERYVKICKWLNKWIVLVLFALSVLVAGAIAAAVSFAVSLLH
Ga0210405_105124911	3300021171	Soil	QPLHNMTASERYAKICQWLNKRILLVVFAVIILVTAAIAAFVSFAVPLLR
Ga0210387_115701212	3300021405	Soil	MLGLAVSHPKQPLHNMTGINRYAKICQWLNKRILLVVFAVIILVTAAIAAFVSFAVPLLR
Ga0210386_113735352	3300021406	Soil	LHNMTAINRYAKICQWLNKRILLVVFAVIVLVTAAIAAFVSFAVPLLR
Ga0210384_101776823	3300021432	Soil	MLGPAVSHAKQPLHNMTAINRDAKISKWLNKWIVLVVFAVIILVTAAIAAFVSFAVPLLR
Ga0210402_107588831	3300021478	Soil	MSGLSVSDTEHPLHNMTAINRYAKICQWLNKRILLVVFAVIVLVTAAIAAFVSFAVPLLR
Ga0210409_105622022	3300021559	Soil	MLGLAVSHPKQPLHNMTGINRYAKICQWLNKRILLVVFAVIILVTGAIAAFVSFAVPLLR
Ga0210409_110355581	3300021559	Soil	MLRLSVSHTKQPHNKTASERYVKICKWLNKWIVLVLFALSVLVAGAIAAAVSF
Ga0212123_1003079510	3300022557	Iron-Sulfur Acid Spring	MLGLSVSHPKQPLHNMTGINRYAKMCQWLNKRILLVVFAVIILVTAAIAAFVSFAVPLLR
Ga0224564_10359932	3300024271	Soil	VSHTKQPLHNMTAINRYAKICKWLNKWIVLVLFAVIILVTAAIAAFVSFAVPLLR
Ga0209171_100192022	3300025320	Iron-Sulfur Acid Spring	MLGLSVSHPKQPLHNMTGINRYAKICQWLNKRILLVVFAVIILVTAAIAAFVSFAVPLLR
Ga0207775_1108982	3300026817	Tropical Forest Soil	MTASKRDVKICRWLNKWIVLVLFALSILVAAAIAAFVSFAVSLLR
Ga0207723_1065772	3300026824	Tropical Forest Soil	MTASKRDVKICRWLNKWIVPVLFALSILVAAAIAAFVSFAVSLLR
Ga0207760_1079101	3300026845	Tropical Forest Soil	MTASKRDVKICRWLNKWIVPVLFALSILVAAAIAAFVSFGVSLLR
Ga0207744_10157451	3300026927	Tropical Forest Soil	VSHTKQPHNMIASKRYAKICKWLNKWIVLVLFALSILVAAAIVAFVSFGVSLLR
Ga0207722_10343372	3300027003	Tropical Forest Soil	MIASKRDVKICRWLNKWIVPVLFALSILVAAAIAAFVSFAVSLLR
Ga0207819_10254942	3300027024	Tropical Forest Soil	AFLMLGNSVSHTKQPHNMIASKRYAKICKWLNKWIVLVLFALSILVAAAIAAFVSFGVSLLR
Ga0207726_10181211	3300027045	Tropical Forest Soil	MLGNSVSHTKQPHNMIASKRYAKICKWLNKWIVLVLFALSILVAAAIAAFVSFAVSLLR
Ga0207806_10286043	3300027049	Tropical Forest Soil	MLVSSVSHTKQPHNMIASKRYAKICKWLNKWIVLVLFALSILVAAAIAAFVSFGVSLLR
Ga0208859_10345482	3300027069	Forest Soil	RYAKICQWLNKRILLVVFAVIILVTAAIAAFVSFAVPLLR
Ga0208603_10319752	3300027109	Forest Soil	MSGLSVSDTEHPLHNMTAINRYAKICQWLNKRILLVVFAVIVLVTAAI
Ga0207761_10089474	3300027516	Tropical Forest Soil	MLGISVSHTKQPHNMIASKRDVKICRWLNKWIVPVLFALSILVAAAIAAFVSFAVSLLR
Ga0209446_10020362	3300027698	Bog Forest Soil	MLGLSVSHPKQPLHNMTAINRYTKICKWLNKWIVLVVFAVLILVTAAIAAFVSFAVPLLR
Ga0209446_10047526	3300027698	Bog Forest Soil	MLGLSVFYPKQPLHNMTAINRSAKICEWLNKWILLVVFALIILVTAAIAAFVSFAVPLLR
Ga0207862_10203302	3300027703	Tropical Forest Soil	MLGNSVSHTKQPHNMIASKRYAKICKWLNKWIVLVLFALSILVAAAIAAFVSFGVSLLR
Ga0209656_100026386	3300027812	Bog Forest Soil	VSDFKTTPHNVTARDRHAKICNWLNKWIVLVAIALVILATAAIAAFVSFAVSLLR
Ga0209656_100183136	3300027812	Bog Forest Soil	MTAINRYAKICQWLNKWIVLVVFALIILVTAAIAAFVSFAVPLLR
Ga0209656_100566444	3300027812	Bog Forest Soil	MLGLSVSHTKQPLHNMTASNRSAKICEWLNKWILLVVFALIILVTAAIAAFVSFAVPLLR
Ga0209656_100976682	3300027812	Bog Forest Soil	VSDIKTTPRNVTVSDRHAKICNWLNKWIVPVAIALIILATAAIAAFVSFAVALLP
Ga0209656_101529823	3300027812	Bog Forest Soil	HTKQPLHNMTAINRYAKICKWLNKWIVLVVFVVIILMTAAIAAFVSFAVPLLR
Ga0209656_101650762	3300027812	Bog Forest Soil	MLGLSVSHSKQPLDNMTAINRYAKICKWLNKWILLLVFALIDEGAHTLHPY
Ga0209656_103337312	3300027812	Bog Forest Soil	MSHTKQPLHNMTVINRHAKILKWFNKWILLVVFALIILMTAAIAAFVSFAVPLLR
Ga0209656_104274002	3300027812	Bog Forest Soil	MLGLSVSHTKQPLHNMTAINRYAKICKWLNKWIVLVVIAVIALVTAAIAAFVSFAVPLLR
Ga0209040_100074336	3300027824	Bog Forest Soil	MTSINRSAKISKWLNKWIVLVVIALIILATAAIAAFVSLAVPLVR
Ga0209040_100569012	3300027824	Bog Forest Soil	VSDIKTTPRNVTVSDRHANICNWLNKWIVLVAIALIILATAAIAAFVSFAVALLP
Ga0209040_101407702	3300027824	Bog Forest Soil	VSHTKQPLHNMTAINRYAKICKWLNKWIVLVVFVVIILMTAAIAAFVSFAVPLLR
Ga0209040_103729572	3300027824	Bog Forest Soil	VSHTKQPLHNMTVINRHAKIFKWFNKWILLVVFAFIILVTAAIAAFVSFAVPLLR
Ga0209040_104245471	3300027824	Bog Forest Soil	NRSAKICEWLNKWILLVVFALIILVTAAIAAFVSFAVPLLR
Ga0209040_105060271	3300027824	Bog Forest Soil	LHNMTAINRYAKICKWLNKWIVLVVIAVIALVTAAIAAFVSFAVPLLR
Ga0209040_105254962	3300027824	Bog Forest Soil	VSHPKQPLHNMTAINRYTKICKWLNKWIVLVVFAVLILVTAAIAAFVSFAVPLLR
Ga0209039_100370362	3300027825	Bog Forest Soil	MTAINRYAKICKWLNKWIVLVVFALIILVTAAIAAFVSFAVPLLR
Ga0209039_101552203	3300027825	Bog Forest Soil	FSVSHTKQPLHNMTASNRSAKICEWLNKWILLVVFALIILVTAAIAAFVSFAVPLLR
Ga0209380_101398292	3300027889	Soil	VSDTEQPLHNMTAINRYAKICKWLNKRILLVVFAVIILVTAAIAAFVSFAVPLLR
Ga0209380_103731002	3300027889	Soil	MTAINRYAKICKWLNKWIVLVLFAVIILVTAAIAVFVSFAVPLLH
Ga0209583_100592033	3300027910	Watersheds	MNAINRYAKICKWLNKWIVLVLFALSILVAAAIAAFVSFAVSLLR
Ga0209698_106665002	3300027911	Watersheds	MTASERYVKICKWLNKWILLVVFALIILVTAAIAAFVSFAVPLLR
Ga0209069_102165232	3300027915	Watersheds	MLGLSVSHTKRPLHNMTAINRYAKICKWLNKRILLVVFAVIILVTAAIAAFVSFAVPLLR
Ga0209526_101132603	3300028047	Forest Soil	MLGLSVSHTKQPLHNMTAINRYAKICKWLNKRILLVVFAVIILVTAAIAAFVSFAVPLLR
Ga0209526_106150931	3300028047	Forest Soil	MTASKRYAKICKWLNKWIVLVLFALSILVAVAIAASVSFAVSLLH
Ga0222749_100582502	3300029636	Soil	MTAINRYAKICKWLNKRILLVVFAVIILVTAAIAAFVSFAVPLLR
Ga0170834_1100688812	3300031057	Forest Soil	FVSHTKQPQNMTASERYVKICKWLNKWIVLVLFALSILVAAAIAAFVSFAVPLLH
Ga0310686_1006772021	3300031708	Soil	MSHSKQPHNMTGSKRYAKICIWLNKWIVPVLFALSILVAAAIAAFVSFAVSLLH
Ga0310686_1102501732	3300031708	Soil	MLGLSVSHTKQPLHNMTAINRYAKICKWLNKWIVLVLFAVIILVTAAIAAFVSFAVPLLR
Ga0310686_1127521922	3300031708	Soil	MTATNRYAKIYKWLNKWIVLVLFAVIILVTAAIAAFVSFAVPLLR
Ga0310686_1131124283	3300031708	Soil	MLGLAVSHPKQPLHNMTAINRYAKICQWLNKRILLVVFAVIILVTAAIAAFVSFAVPYCAKVDYEIKI
Ga0311301_103606582	3300032160	Peatlands Soil	MTAINRYAKICKWLNKWILLLVSALIILVPAAIAAFVGFAVSLLR
Ga0311301_107636992	3300032160	Peatlands Soil	MLGSSVSHPKQPLYNMTAINRYAKICKWLNKWILLLVFALIILVTAAIAAFVSFAVPLLH
Ga0306920_1040529052	3300032261	Soil	MTPSKRYAKICKWLNKWIVLVLFALSILVAAAIAAFVSFAVSLLR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077708

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences