NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F077843

Metagenome Family F077843

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F077843
Family Type Metagenome
Number of Sequences 117
Average Sequence Length 70 residues
Representative Sequence VVPITQVPAVVRDVVFEWRNARAADLLFTHRTDAIIAAVILIGLSFAVLVGRALTRTKAGRTQVALPAVL
Number of Associated Samples 102
Number of Associated Scaffolds 117

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 96.58 %
% of genes near scaffold ends (potentially truncated) 98.29 %
% of genes from short scaffolds (< 2000 bps) 97.44 %
Associated GOLD sequencing projects 92
AlphaFold2 3D model prediction Yes
3D model pTM-score0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (98.291 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(9.402 % of family members)
Environment Ontology (ENVO) Unclassified
(42.735 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(58.974 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 59.18%    β-sheet: 0.00%    Coil/Unstructured: 40.82%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.49
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 117 Family Scaffolds
PF00072Response_reg 0.85
PF01882DUF58 0.85
PF07726AAA_3 0.85
PF01144CoA_trans 0.85
PF02789Peptidase_M17_N 0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 117 Family Scaffolds
COG0260Leucyl aminopeptidaseAmino acid transport and metabolism [E] 0.85
COG1721Uncharacterized conserved protein, DUF58 family, contains vWF domainFunction unknown [S] 0.85
COG1788Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunitLipid transport and metabolism [I] 0.85
COG2057Acyl-CoA:acetate/3-ketoacid CoA transferase, beta subunitLipid transport and metabolism [I] 0.85
COG4670Acyl CoA:acetate/3-ketoacid CoA transferaseLipid transport and metabolism [I] 0.85

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.29 %
UnclassifiedrootN/A1.71 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908032|Perma_A_C_ConsensusfromContig187341All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium632Open in IMG/M
2199352025|deepsgr__Contig_159960All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium504Open in IMG/M
3300001305|C688J14111_10198927All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium622Open in IMG/M
3300002568|C688J35102_119904756All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium809Open in IMG/M
3300004153|Ga0063455_100260393All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium917Open in IMG/M
3300004153|Ga0063455_100930411All Organisms → cellular organisms → Bacteria → Acidobacteria620Open in IMG/M
3300004479|Ga0062595_102046461All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium555Open in IMG/M
3300004633|Ga0066395_10732393All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium589Open in IMG/M
3300005163|Ga0066823_10073010All Organisms → cellular organisms → Bacteria → Acidobacteria661Open in IMG/M
3300005293|Ga0065715_11101922All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium520Open in IMG/M
3300005336|Ga0070680_101427301Not Available599Open in IMG/M
3300005343|Ga0070687_101525618All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium503Open in IMG/M
3300005345|Ga0070692_10097009All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1611Open in IMG/M
3300005353|Ga0070669_100087317All Organisms → cellular organisms → Bacteria → Acidobacteria2332Open in IMG/M
3300005353|Ga0070669_100274276All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1350Open in IMG/M
3300005353|Ga0070669_101651444All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium558Open in IMG/M
3300005354|Ga0070675_101359961All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium655Open in IMG/M
3300005366|Ga0070659_100842357All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium799Open in IMG/M
3300005366|Ga0070659_101921225All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium531Open in IMG/M
3300005366|Ga0070659_101943146All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium528Open in IMG/M
3300005367|Ga0070667_100814627All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium867Open in IMG/M
3300005436|Ga0070713_101356613All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium689Open in IMG/M
3300005454|Ga0066687_10489790All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium725Open in IMG/M
3300005459|Ga0068867_102392469All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium503Open in IMG/M
3300005471|Ga0070698_100416927All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1277Open in IMG/M
3300005545|Ga0070695_100889103All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium719Open in IMG/M
3300005545|Ga0070695_101625051Not Available540Open in IMG/M
3300005546|Ga0070696_100245435All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1352Open in IMG/M
3300005546|Ga0070696_101846049All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium523Open in IMG/M
3300005549|Ga0070704_100779437All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium853Open in IMG/M
3300005566|Ga0066693_10259261All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium689Open in IMG/M
3300005578|Ga0068854_101860207All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium553Open in IMG/M
3300005615|Ga0070702_101843553All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium506Open in IMG/M
3300005616|Ga0068852_101909007All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium616Open in IMG/M
3300005618|Ga0068864_102194476All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium559Open in IMG/M
3300005764|Ga0066903_105051920All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium699Open in IMG/M
3300005834|Ga0068851_11052317All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium515Open in IMG/M
3300005840|Ga0068870_11040312All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium586Open in IMG/M
3300005842|Ga0068858_100056855All Organisms → cellular organisms → Bacteria → Acidobacteria3615Open in IMG/M
3300005842|Ga0068858_101090874All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium784Open in IMG/M
3300005842|Ga0068858_101310826All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium713Open in IMG/M
3300005844|Ga0068862_100923502All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium859Open in IMG/M
3300006163|Ga0070715_10574415All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium657Open in IMG/M
3300006854|Ga0075425_102625672All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium556Open in IMG/M
3300006914|Ga0075436_100311935All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1129Open in IMG/M
3300009038|Ga0099829_10789722All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium789Open in IMG/M
3300009089|Ga0099828_11963599All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium512Open in IMG/M
3300009094|Ga0111539_13459672All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium507Open in IMG/M
3300009098|Ga0105245_12837598All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium537Open in IMG/M
3300009100|Ga0075418_10263259All Organisms → cellular organisms → Bacteria → Acidobacteria1837Open in IMG/M
3300009101|Ga0105247_10254193All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1202Open in IMG/M
3300009137|Ga0066709_101207508All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1113Open in IMG/M
3300009147|Ga0114129_10061805All Organisms → cellular organisms → Bacteria5234Open in IMG/M
3300009147|Ga0114129_10454333All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1680Open in IMG/M
3300009156|Ga0111538_11337562All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium904Open in IMG/M
3300009162|Ga0075423_10896342All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium940Open in IMG/M
3300009162|Ga0075423_11725562All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium674Open in IMG/M
3300009176|Ga0105242_12712517All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium545Open in IMG/M
3300009553|Ga0105249_10659178All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1105Open in IMG/M
3300009610|Ga0105340_1041118All Organisms → cellular organisms → Bacteria → Acidobacteria1800Open in IMG/M
3300010301|Ga0134070_10085520All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1088Open in IMG/M
3300010373|Ga0134128_12623769All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium555Open in IMG/M
3300010397|Ga0134124_12839438All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium528Open in IMG/M
3300010400|Ga0134122_12425975All Organisms → cellular organisms → Bacteria → Acidobacteria572Open in IMG/M
3300012363|Ga0137390_10571263All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1100Open in IMG/M
3300012944|Ga0137410_11998273All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium515Open in IMG/M
3300012988|Ga0164306_11188319All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium639Open in IMG/M
3300013308|Ga0157375_11133416All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium916Open in IMG/M
3300015374|Ga0132255_103619381All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium657Open in IMG/M
3300016270|Ga0182036_11730292All Organisms → cellular organisms → Bacteria → Acidobacteria528Open in IMG/M
3300017792|Ga0163161_11107363All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium681Open in IMG/M
3300020034|Ga0193753_10278674All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium729Open in IMG/M
3300021080|Ga0210382_10117248All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1121Open in IMG/M
3300021081|Ga0210379_10133906All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1047Open in IMG/M
3300021401|Ga0210393_11656008All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium507Open in IMG/M
3300022756|Ga0222622_10330103All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1058Open in IMG/M
3300025893|Ga0207682_10510869All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium569Open in IMG/M
3300025901|Ga0207688_10586076All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium702Open in IMG/M
3300025901|Ga0207688_11018428All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium523Open in IMG/M
3300025917|Ga0207660_11241396All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium606Open in IMG/M
3300025925|Ga0207650_10287662All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1339Open in IMG/M
3300025926|Ga0207659_10251324All Organisms → cellular organisms → Bacteria → Acidobacteria1435Open in IMG/M
3300025927|Ga0207687_11344151All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium614Open in IMG/M
3300025934|Ga0207686_10262885All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1266Open in IMG/M
3300025937|Ga0207669_10456475All Organisms → cellular organisms → Bacteria → Acidobacteria1014Open in IMG/M
3300025940|Ga0207691_10361978All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1240Open in IMG/M
3300025942|Ga0207689_10845735All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium772Open in IMG/M
3300025945|Ga0207679_11158461All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium709Open in IMG/M
3300025961|Ga0207712_10446127All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1096Open in IMG/M
3300026041|Ga0207639_11121084All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium738Open in IMG/M
3300026142|Ga0207698_11019996All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium839Open in IMG/M
3300027310|Ga0207983_1037571All Organisms → cellular organisms → Bacteria → Acidobacteria618Open in IMG/M
3300027748|Ga0209689_1281456All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium654Open in IMG/M
3300027875|Ga0209283_10165624All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1467Open in IMG/M
3300027903|Ga0209488_10907917All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium617Open in IMG/M
3300028065|Ga0247685_1034752All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium612Open in IMG/M
3300028381|Ga0268264_10361015All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1385Open in IMG/M
3300028597|Ga0247820_11328182All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium522Open in IMG/M
3300028713|Ga0307303_10149925All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium559Open in IMG/M
3300028715|Ga0307313_10278222All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium521Open in IMG/M
3300028784|Ga0307282_10076454All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1528Open in IMG/M
3300028799|Ga0307284_10205769All Organisms → cellular organisms → Bacteria → Acidobacteria774Open in IMG/M
3300028828|Ga0307312_10566002All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium751Open in IMG/M
3300028828|Ga0307312_10920685All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium579Open in IMG/M
3300031170|Ga0307498_10468822All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium509Open in IMG/M
3300031366|Ga0307506_10282789All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium643Open in IMG/M
3300031740|Ga0307468_100648035All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium872Open in IMG/M
3300031854|Ga0310904_11264357All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium534Open in IMG/M
3300031890|Ga0306925_10616994All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1144Open in IMG/M
3300031912|Ga0306921_12741455All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium505Open in IMG/M
3300032041|Ga0318549_10462737All Organisms → cellular organisms → Bacteria → Acidobacteria571Open in IMG/M
3300032180|Ga0307471_102661802All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium634Open in IMG/M
3300032180|Ga0307471_103221244All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium579Open in IMG/M
3300032205|Ga0307472_102203621All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium556Open in IMG/M
3300032205|Ga0307472_102222429All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium554Open in IMG/M
3300032421|Ga0310812_10142390All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1014Open in IMG/M
3300034149|Ga0364929_0210930All Organisms → cellular organisms → Bacteria → Acidobacteria645Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.40%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere8.55%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere7.69%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil5.13%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere5.13%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.27%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere4.27%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere4.27%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere4.27%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil3.42%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.42%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.42%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.56%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.56%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.56%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.56%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.71%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.71%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.71%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.71%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.85%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.85%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil0.85%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.85%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.85%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.85%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.85%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908032Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_allEnvironmentalOpen in IMG/M
2199352025Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOILEnvironmentalOpen in IMG/M
3300001305Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005163Soil and rhizosphere microbial communities from Laval, Canada - mgHMBEnvironmentalOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005834Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009610Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300020034Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2EnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redoEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027310Soil and rhizosphere microbial communities from Laval, Canada - mgHMB (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028065Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK26EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028597Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14EnvironmentalOpen in IMG/M
3300028713Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184EnvironmentalOpen in IMG/M
3300028715Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031366Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_SEnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300032041Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032421Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3EnvironmentalOpen in IMG/M
3300034149Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Perma_A_C_011989202124908032SoilVIVEWRNARTADLLFTHRDDAIIAMVVLIGLAMAVLVGRALTRNKAGRTQVALPAVLDWSGGSWT
deepsgr_026535002199352025SoilVAGGAARPDPAGLAGVVPITQLPAVVRDVIFEWRNARAADLLFTHRDDSIIAMVVLIGLAMAVLSSGR
C688J14111_1019892713300001305SoilVVPISQVPATLRDVIFEWRNSRAADLLFTHRTDAIIAAVILIGMAFAVLVGRALTRSKAGRTQVALPAVLEWSGGSWTSIV
C688J35102_11990475623300002568SoilVVPITRLPAVVRETIIEWRNVRAADLLFTHRNDAIMAGVVVIGVCAAVLILRALTRTKAGRTQVALPAVLDWSGGSRFTSLVRHGALI
Ga0063455_10026039313300004153SoilVVPITQVPAVVRDAFFEWRNARAADLLFTHRDDSIIAMVVLIGLALTVMIGRTLTRKKAGRTQVALPAVLDWSGGS
Ga0063455_10093041123300004153SoilVVPITRLPAVVRETIIEWRNVRAADLLFTHRNDAIMAGVVVIGVCAAVLILRALTRTKAGRTQVALPAVLDWSGGS
Ga0062595_10204646113300004479SoilVVPITQVPASLRDVFFEWRNSRAADLLFTHRTDAIIAAVILIGVAIAVLVGRALTRSKAGRTQVALPAVLEWSG
Ga0066395_1073239323300004633Tropical Forest SoilVVPISQVPASVRDAVFEWRNTRAADLLFTHRTDAIIAAVLLIGVSMAVLVGRALTRTKAGRTQVALPAVLEWSGG
Ga0066823_1007301023300005163SoilVAGGAARPDPAGIASVVPITQLPAVVRDVIFEWRNARAADLLFTHRDDSIIAMVVLIGLAMAVLLVRALTRNKAGRTQ
Ga0065715_1110192223300005293Miscanthus RhizosphereVVPITQVPASLRDVFFEWRNSRAADLLFTHRTDAIIAAVILIGVAIAVLVGRALTRSKA
Ga0070680_10142730113300005336Corn RhizosphereVVPITQVPTLIRDTFFEWRNTRAATLLFLHRDIAILTLVVIGGLSIAVLAGRALTRGKAGRTQVALPAVLKW
Ga0070687_10152561823300005343Switchgrass RhizosphereVVPITQVPAVVRDVIFEWRNARTADLLFTHRDDSIIAMVILIGLAMAVLLGRALTRNKAGRTQVALPAVLDWSGGS
Ga0070692_1009700933300005345Corn, Switchgrass And Miscanthus RhizosphereVVAITQVPAVIRETVIEWRNSRAADLLFTHRNDAIIATVVLIGLCGAVLVIRSLTRTRA
Ga0070669_10008731733300005353Switchgrass RhizosphereVVPITQVPAVLRETVIEWRNSRAADLLFTHRNDAIIAAVVLISLCAAVLILRALTRTKAGRTQV
Ga0070669_10027427623300005353Switchgrass RhizosphereVVPITQVPAVLRETIIEWRNSRAADLLFTHRNDAIIAAVALISLCAAVLILRALTRTKAGRTQVALPAVLDW
Ga0070669_10165144423300005353Switchgrass RhizosphereMVPITQVPTLIRDTFFEWRNTRAATLLFLHRDIAILTLVVIGGLSIAVLAGRALTRGKAGRTQVALPAVLKWSGGPTFFSTSFIRHGALLLF
Ga0070675_10135996113300005354Miscanthus RhizosphereVVPITQVPAVVRDAIFEWRNARAANLLFTHRDDSIIAMVVLIGLAMTVLVVRALTRNKAGRTQVALPAVLDWSGGSW
Ga0070659_10084235723300005366Corn RhizosphereVVPITQVPASLRDVFFEWRNSRAADLLFTHRTDAIIAAVILIGVAIAVLVGRALTRSKAGRTQVALP
Ga0070659_10192122523300005366Corn RhizosphereVVPITQVPAVVRDAIFEWRNARAASLLFTHRDDAIIAMVVLIGLALTVLVVRALTRNKAGRTQVALPAVLDWSGGSWTSI
Ga0070659_10194314613300005366Corn RhizosphereVVAITQVPAVIRETVIEWRNSRAADLLFTHRNDAIIAAVVLISLCAAVLILRALTRTKAGRTQVALPAVLDWSG
Ga0070667_10081462723300005367Switchgrass RhizosphereVVPITQVPAVLRETIIEWRNSRAADLLFTHRNDAIFAAVALISLCAIVLIIRALTRTKA
Ga0070713_10135661323300005436Corn, Switchgrass And Miscanthus RhizosphereVVPITQVPASIREAVFEWRNSRAADLLFTHRTDAIMAAVVLIGVSSAVLVGRALTRTK
Ga0066687_1048979023300005454SoilVVPITQVPASIRDVIFEWRNSRAADLLFAHRTDAIIAAVILIGVSIAVLVGRALTRTKA
Ga0068867_10239246913300005459Miscanthus RhizosphereVVPITQVPAVLRETIIEWRNSRAADLLFTHRNDAIFAAVALISLCAIVLIIRALTRTKAGRTQVALPAVLDWSG
Ga0070698_10041692723300005471Corn, Switchgrass And Miscanthus RhizosphereVVPITQVPAVVRDVVFEWRNARAADLLFTHRTDAIIAAVILIGLSFAVLVGRALTRTKAGRTQVALPAVL
Ga0070695_10088910323300005545Corn, Switchgrass And Miscanthus RhizosphereVVPITQVPAVVRETVIEWRNSRAADLLFTHRNDAIIAAVALISLCAAVLILRALTRTKAG
Ga0070695_10162505123300005545Corn, Switchgrass And Miscanthus RhizosphereVVPITQVPTLIRDTFFEWRNTRAATLLFLHRDIAILTLVVIGGLSIAVLAGRALTRGKAGRTQVALPA
Ga0070696_10024543523300005546Corn, Switchgrass And Miscanthus RhizosphereVVAITQVPAVIRETVIEWRNSRAADLLFTHRNDAIIATVVLIGLCGAVLVIRSLTRTRAGRTQVALPAVLDWSGGS
Ga0070696_10184604923300005546Corn, Switchgrass And Miscanthus RhizosphereVVPITQVPAVIRETVIEWRNSRAADLLFTHRNDAIIATVVLLGLCAAVLVIRALTRTKAGRTQVALPAVLDWSGGSKFTSLVRHGALLLF
Ga0070704_10077943723300005549Corn, Switchgrass And Miscanthus RhizosphereVVAITQVPAVIRETVIEWRNSRAADLLFTHRNDAIIATVVLIGLCGAVLVIRSLTRTRAGRTQVALPAVLDWSGGSTFT
Ga0066693_1025926123300005566SoilVVPITQVPPSIRDVIYEWRNSRAADLLFTHRTDAIIAAVILIGVSVAVLAGRALTRTKAGRTQVALPAVLQWSGGSWA
Ga0068854_10186020723300005578Corn RhizosphereVVPITQVPAVLRETIIEWRNSRAADLLFTHRNDAIFAAVALISLCAIVLIIRALTRTKAGRTQVALPA
Ga0070702_10184355323300005615Corn, Switchgrass And Miscanthus RhizosphereVVPITQVPAVIRDVIFEWRNARTADLLFTHRDDSIIAMVVLIGLAMAVLVGRALTRNKAGRTQVALPAVL
Ga0068852_10190900713300005616Corn RhizosphereVGSTARAHTAGIAGVVPITQLPAVVRDVIFEWRNARTADLLFTHRDDSIIAMVVLVGLALAVLVGRALTRNKAGRTQVALPAVLDWSGGSWT
Ga0068864_10219447623300005618Switchgrass RhizosphereVVPITQVPAVVRDTIFEWRNARAADLLFTHRDDSIIAMVVLIGLAMTVLVVRALT
Ga0066903_10505192023300005764Tropical Forest SoilVVPITQVPASIRDVVFEWRNSRAADLLFTHRTDAIIAAVILIGLSIAVLIGRALTRTKAGRTQ
Ga0068851_1105231723300005834Corn RhizosphereVVPITQVPASLRDVIVEWRNSRAADLLFTHRNDAIIAAVSLISLCAAVLIIRSLTRTKAGRTQVALPAVLDWSG
Ga0068870_1104031223300005840Miscanthus RhizosphereVVPITQVPAVLRETIIEWRNSRAADLLFTHRNDAIIATVALISLCAIVLILRALTRTKAGRTQVALPAVLDWSG
Ga0068858_10005685513300005842Switchgrass RhizosphereVGSTARAHTAGIAGVVPITQLPAVVRDVIFEWRNARTADLLFTHRDDSIIAMVVLVGLALAVLVGRALTRNKAGRTQVALPA
Ga0068858_10109087423300005842Switchgrass RhizosphereVVPITQVPAVVRDAIFEWRNSRAADLLFTHRDDSIIAMVVLIGLALMVIVVRTLTRKKAGRTQVALPA
Ga0068858_10131082623300005842Switchgrass RhizosphereVVPITQVPASLRDVIVEWRNSRAADLLFTHRTDAIIASVILIGLAMAVLVGRALTRSKAGRTQVALPAVLDWSGGSWTSIV
Ga0068862_10092350213300005844Switchgrass RhizosphereVVPITQLPAVIRETIIEWRNIRAADLLFTHRSDAIIAAVVLIGLCAVVLVLRAFTRTKAGRTQVALPAVLD
Ga0070715_1057441523300006163Corn, Switchgrass And Miscanthus RhizosphereVVPITQVPASIRDAIFEWRNSRAADLLFTHRTDAIIAAVILIGVSIAVLVGRALTRTKAGRTQVALPAVLEWSGGSW
Ga0075425_10262567223300006854Populus RhizosphereVVPISQVPAGVRDAIFEWRNARAASLLFTHRTDAIIAAVILIGLPMAVLVGRALT
Ga0075436_10031193513300006914Populus RhizosphereVVPITQVPASLRDVVFEWRNSRAADLLFTHRTDAIIAAVILIGVAIAVLVGRALTRSKAGRTQVALPAVLEWSGGSWTSI
Ga0099829_1078972223300009038Vadose Zone SoilVVPITQVPAFIRDLVFEWRNVRTADLLFTHRTDAIFAAVILIGLSAAVLVGRALTRSRAGRTQVALPAVL
Ga0099828_1196359923300009089Vadose Zone SoilVVPITQVPAVVREAIFEWRNARSADLLFTHRNDAIIAAVLLIGLSAAVLAGRALTRTRA
Ga0111539_1345967213300009094Populus RhizosphereVVPITQVPTLIRDTIFEWRNTRAATLLFLHRDIAILALVVIVGLSIAVLAGRALTRRKAGRTQVALPAVLKWSGGP
Ga0105245_1283759823300009098Miscanthus RhizosphereVVAITQVPAVLRETVIEWRNSRAAGLLFTHRNDAIIATVVLIGLCGAVLVIRSL
Ga0075418_1026325933300009100Populus RhizosphereVVPITQVPTLIRDTILEWRNTRAATLLFLHRDIAILALVVIIGLSIAVLAGRALTRRKAGRTQVALPAVLKWSGGP
Ga0105247_1025419313300009101Switchgrass RhizosphereMEWRNTRAANLLFTHRDTTILAIVALIGLCFTILVGRALTRKKAGRTQVALPAVLDWSGRNWTALVRHGALLLFL
Ga0066709_10120750823300009137Grasslands SoilVVSLTQVPAALREMAFEWRNTRAASLLFTHRATAILAIVALIGLCFTVLVGRALTRKKAGRTQVALPAVLEWSGRNWTAI
Ga0114129_1006180513300009147Populus RhizosphereMEWRNTRAATLLFAHRDTAILTLVVIVGLSAAVLAIRALTRRKAGRTQVALPAVLKWSGGRSF
Ga0114129_1045433333300009147Populus RhizosphereMVAVTQVPALIRETIIEWRNTRAASLLFLHRDTAVLTLVVLIGLAITVIAGRALTRRKAGRTQVALPAVL
Ga0111538_1133756213300009156Populus RhizosphereVVPITQVPTLIRDTFFEWRNTRAATLLFLHRDIAILALVGIVGLSIAVIAGRALTRRKAGRTQVALPAVLKWSGGPTFFSTSFIRH
Ga0075423_1089634213300009162Populus RhizosphereVVPITQVPAVVRETVIEWRNSRAADLLFTHRNDAIIAAVALISLCAAVLILRALTRTKAGRTQVALPAVLEWSGGSRLTSLVRHGALILFLV
Ga0075423_1172556223300009162Populus RhizosphereVVPITQVPPSIRDVIYEWRNSRAADLLFTHRTDAIIAAVILIGVSVAVLLGRALTRTKAGRTQVALPAVLQWSGGSWTSIVR
Ga0105242_1271251713300009176Miscanthus RhizosphereVVPITQVPAFVRELVFEWRNVRTADLLFTHRTDAIFAAVILIGLSAAVLVLRALTRTKAGRTQV
Ga0105249_1065917823300009553Switchgrass RhizosphereMAFEWRNARAVDLLFTHRNDAIIATVVLIGLSAAVLIVRSLTRTKAGRTQVALPAVLDWSGGS
Ga0105340_104111833300009610SoilVVPITQVPTLIRDTFFEWRNTRAATLLFLHRDIAILALVVIGGLSIAVLAGRALTRGKAGRTQVALPAVLKWSGGPTFFSTSFIRHGALLLF
Ga0134070_1008552013300010301Grasslands SoilVVPITQVPAVIREAIFEWRNARAADLLFTHRNDAIIAAVILIGLSAAVLAGRALTRTR
Ga0134128_1262376913300010373Terrestrial SoilVVPITQVPASLRDVIVEWRNSRAADLLFTHRTDAIIAAVILIGLSVAVIVGRALTRSKA
Ga0134124_1283943813300010397Terrestrial SoilVVPITQVPAVVRDAIFEWRNARAADLLFTHRDDSIIAMVVLVGLAMAVLVFRAMTRNKAGRTQVALPAVLD
Ga0134122_1242597523300010400Terrestrial SoilVVPITQLPAVVRDAIFEWRNARAADLLFTHRDDSILAMVGLIGLAIGVLVWRAL
Ga0137390_1057126323300012363Vadose Zone SoilVVPITQVPAVVREAIFEWRNARAADLLFTHRNDAIITAVILIGLSAAVLAGRALTRTKAGRTQVALPAVLDWSGGSW
Ga0137410_1199827323300012944Vadose Zone SoilVVPITQVPAVVRDAIFEWRNARAADLLFTHRDDSIIAMVLLIGLALAVLVGRALTRN
Ga0164306_1118831923300012988SoilVVPITQVPAVIRDVIFEWRNARTADLLFTHRDDAIIAMVVLIGGAMVVLVGRALTRTKAGRTQVALPAVL
Ga0157375_1113341613300013308Miscanthus RhizosphereVVPITQVPAVVRDAIFEWRNARAADLLFTHRDDSIIAMVVLIGLAMAVLVGRALTRNKAGRTQ
Ga0132255_10361938123300015374Arabidopsis RhizosphereVVPITAVPTLIRDTIFEWRNTRAANLLFLHRDIAVLAVVIIVGLTMAVLAGRALTRRKAGRTQVALPAVLKWSG
Ga0182036_1173029223300016270SoilVVPITHLPAVIRDVIFEWRNARTADLLFTHRDDSIIAMVLLVGLALAVLVGRAL
Ga0163161_1110736313300017792Switchgrass RhizosphereVVAITQVPAVIRETVIEWRNSRAADLLFTHRNDAIIATVVLIGLCGAVLVLRSLTRTK
Ga0193753_1027867423300020034SoilVVPITQLPAVIRDVIFEWRNARTADLLFTHRDDSIIAMVVLIGLAMAVLVGRALTRNKAGRT
Ga0210382_1011724823300021080Groundwater SedimentVVPITQVPAVIRETVIEWRNSRAADLLFTHRNDAIIATVVLIGLCAAVLVLRSLTR
Ga0210379_1013390613300021081Groundwater SedimentVVPITQVPTLIRDTFFEWRNTRAATLLFLHRDIAILTLVVIGGLSIAVLAGRALTRGKAGRTQVALPAVLKWSGGPTFFSTSFIRHGALLL
Ga0210393_1165600813300021401SoilVVPITQLPAVVRDVIFEWRNARTQDLLFTHRDDSIIAMVVLVGLAMAVLVFRALTRNRAG
Ga0222622_1033010323300022756Groundwater SedimentVVPITQVPAVVRDAIFEWRNARAADLLFTHRDDSIIAMVVLIGLAMTVLVLRALTRNKAGRTQVALPAVLDW
Ga0207682_1051086913300025893Miscanthus RhizosphereVVPITQVPAVLRETIIEWRNSRAADLLFTHRNDAIIATVALISLCAIVLILRALTRTKAGRTQVALPAVLDWSGG
Ga0207688_1058607623300025901Corn, Switchgrass And Miscanthus RhizosphereVVPITQVPAVVRDAIFEWRNSRAADLLFTHRDDSIIAMVVLIGLALMVIVVRTLTRKKAGRTQVALPAVLDWSGG
Ga0207688_1101842813300025901Corn, Switchgrass And Miscanthus RhizosphereVVPISQVPSVIRDSIFEWRNTRAADLLFTHRDVAIIASIVLIGLSIAVLVGRALTRTKAGRTQVALPAVLDWSGGSWTSIVR
Ga0207660_1124139613300025917Corn RhizosphereVVPITQVPTLIRDTFFEWRNTRAATLLFLHRDIAILTLVVIGGLSIAVLAGRALTRGKAGRTQVALPAVLKWSGG
Ga0207650_1028766213300025925Switchgrass RhizosphereVVPITQVPAVVRDAIFEWRNARAADLLFTHRDDSIIAMVVLIGLAMTVLVLRALTRNKAG
Ga0207659_1025132413300025926Miscanthus RhizosphereVVPLTQVPTALRDVVMEWRNTRAANLLFTHRDTTILAIVALIGLCFTILVGRALTRKKAGRTQVALPAVLD
Ga0207687_1134415123300025927Miscanthus RhizosphereVVPITQVPAVVRDAIFEWRNARAADLLFTHRDDSIIAMVVLIGLAMTVLVLRALTRNKA
Ga0207686_1026288523300025934Miscanthus RhizosphereVVPITQVPAVLRETVIEWRNSRAADLLFTHRNDAIIAAVVLISLCAAVLILRALTRTKAGRTQVALPAVLDWSGGSRLTSLIRHGALILFL
Ga0207669_1045647513300025937Miscanthus RhizosphereVVPLTQVPTALRDVVMEWRNTRAANLLFTHRDTTILAIVALIGLCFTILVGRALTRKKAGRTQVALPAVLDW
Ga0207691_1036197813300025940Miscanthus RhizosphereVVPITQVPAVLRETVIEWRNSRAADLLFTHRNDAIIAAVVLISLCAAVLILRALTRTKAGRTQVALPAVLDWSGGSRLTS
Ga0207689_1084573523300025942Miscanthus RhizosphereVVPITQVPAVIREMAFEWRNARAVDLLFTHRNDAIIATVVLIGLSAAVLIVRSLTRTK
Ga0207679_1115846123300025945Corn RhizosphereVVPITQVPAVVRDTIFEWRNARAADLLFTHRDDSIIAMVVLIGLAMTVLVVRA
Ga0207712_1044612723300025961Switchgrass RhizosphereVVPITQVPAVIREMAFEWRNARAVDLLFTHRNDAIIATVVLIGLSAAVLIVRSLTRTKAGRTQVALPAVLDWSG
Ga0207639_1112108423300026041Corn RhizosphereVVPITQVPASLRDVFFEWRNSRAADLLFTHRTDAIIAAVILIGVAIAVLVGRALTRSKAGRTQVALPAVLEWSGGSWTSIVR
Ga0207698_1101999613300026142Corn RhizosphereVGSTARAHTAGIAGVVPITQLPAVVRDVIFEWRNARTADLLFTHRDDSIIAMVVLIGLALAVLVGRALTRKKAGRTQVALPAVLDWSGGS
Ga0207983_103757123300027310SoilVVPITQLPAVVRDVIFEWRNARAADLLFTHRDDSIIAMVVLIGLAMAVLLVRALTRNKAGRTQVAL
Ga0209689_128145623300027748SoilVVPITQVPASIRDVIFEWRNSRAADLLFAHRTDAIIAAVILIGVSIAVLVGRALTRTKVSSGAPVV
Ga0209283_1016562413300027875Vadose Zone SoilVVPITQVPAVVRDVVFEWRNARTADLLFTHRTDAIIAAVILIGLSIAVLVGRALTRTKAGRTQVALPAVLEWSGGSWTSMVRH
Ga0209488_1090791713300027903Vadose Zone SoilVVPITQVPAVVRDVVFEWRNARAADLLFTHRTDAIIAAVILIGLSIAVLAGRALTRTKAGRTQVALPAVLEWSGGSWASIVR
Ga0247685_103475223300028065SoilVVPITQVPASIREVVFEWRNSRAADLLFTHRTDAIIAAVILIGLSVAVIVGRALTRSKAGRTQVALPAVLEWSGG
Ga0268264_1036101523300028381Switchgrass RhizosphereVVPITQVPAVVRDAIFEWRNSRAADLLFTHRDDSIIAMVVLIGLALMVIVVRTLT
Ga0247820_1132818223300028597SoilVVPITQVPAVLRETIIEWRNSRAADLLFTHRNDAIFAAVALISLCAIVLIIRALTRTKAGRTQVALPAVLDWSGGSKFTA
Ga0307303_1014992523300028713SoilVVPISQVPSVIRDSIFEWRNTRAADLLFTHRDVAIIASIILIGLSIAVLVGRALTRTKAGRTQVALPAVLDWSGGSWTSI
Ga0307313_1027822223300028715SoilVVPITQVPAVIRETVIEWRNSRAADLLFTHRNDAIIATVVLIGLCAAVLLLRSLSRTKAGRTQVALPAVLDWSGGSKFTS
Ga0307282_1007645413300028784SoilVVPITQVPAVIRETVIEWRNSRAADLLFTHRHDAIIATVVLIGLCAAVLVMRSLTRTKAGRTQVALPAVLDWSGGSRVTAL
Ga0307284_1020576923300028799SoilVVPISEVPSVIRDSIFEWRNTRAADLLFTHRDVAIIASVVLIGLSIAVLVGRALTRTKAGRTQIA
Ga0307312_1056600213300028828SoilVVPITQVPAVVREAIFEWRNARAADLLFTHRNDAIITAVLLIGLSAAVLAGRA
Ga0307312_1092068513300028828SoilVVPITQLPAVVRDVIFEWRNARTQDLLFTHRDDSIIAMVVLIGLAMAVLVFRAL
Ga0307498_1046882223300031170SoilVVPITQVPAVIRDVIFEWRNARTADLLFTHRDDSIIAMVVLIGLAMAVLVGRALTRNKAGRTQVA
Ga0307506_1028278913300031366SoilVVPITQLPAVVRDVIFEWRNARTQDLLFTHRDDSIIAMVVLVGLAMAVLLFRALTRNKAGRTQVALPAVLDWSGGS
Ga0307468_10064803523300031740Hardwood Forest SoilVVPITQVPASIRDVVFEWRNSRAADLLFTHRTDAIIAAVILIGVAIAVLTGRALTRSKAGRTQVALPAVLEWT
Ga0310904_1126435723300031854SoilMVPITQVPALIRETILEWRNTRAASLLFAHRDTAVLTIILLIGACGTLLVARALTRRKAGRTQVALPAVLKWSGGSSWFSTSFIRHGALLV
Ga0306925_1061699423300031890SoilVVPITHLPAVIRDVIFEWRNARTADLLFTHRDDSIIAMVLLVGLALAVLVGRALTRNKAGRTQ
Ga0306921_1274145523300031912SoilVVPITHLPAVIRDVIFEWRNARTADLLFTHRDDSIIAMVLLVGLALAVLVGRALTRNKAGRTQVALPAVL
Ga0318549_1046273723300032041SoilVVPITHLPAVIRDVIFEWRNARTADLLFTHRDDSIIAMVLLVGLALAVLVGRALTRNKAG
Ga0307471_10266180213300032180Hardwood Forest SoilVVPISAVPALVRATIDEWRNTRTADLLFTHRTDAILAAVILIGMSIAVLVGRAL
Ga0307471_10322124413300032180Hardwood Forest SoilVVPITQVPAVIREAIFEWRNARAADLLFTHRSDAIIAAVILIGLSAAVLAGRALTRTRA
Ga0307472_10220362113300032205Hardwood Forest SoilVGSTARAHTAGIAGVVPITQLPAVVRDVIFEWRNARTADLLFTHRDDSIIAMVVLVGLALAVLVGRALTRNKAGR
Ga0307472_10222242923300032205Hardwood Forest SoilVVPITQVPAFVRDLVFEWRNVRTAELLFTHRTDAIFAAVILIGLSAAVLVLRALTRTKAGRTQVALPAVLEWSGGSWT
Ga0310812_1014239023300032421SoilVVPITQVPASLRDVFFEWRNSRAADLLFTHRTDAIIAAVILIGLAIAVLVGRALTR
Ga0364929_0210930_3_2333300034149SedimentVVPISQVPSVIRDSIFEWRNTRAADLLFTHRDVAIIASVILIGLSIAVLVGRALTRTKAGRTQVALPAVLDWSGGSW

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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