NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F077866

Metagenome / Metatranscriptome Family F077866

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F077866
Family Type Metagenome / Metatranscriptome
Number of Sequences 117
Average Sequence Length 102 residues
Representative Sequence MLPGMEERVSLQKRLEGHLPPPPESVNREAFSRPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR
Number of Associated Samples 100
Number of Associated Scaffolds 117

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 27.35 %
% of genes near scaffold ends (potentially truncated) 35.90 %
% of genes from short scaffolds (< 2000 bps) 83.76 %
Associated GOLD sequencing projects 89
AlphaFold2 3D model prediction Yes
3D model pTM-score0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (57.265 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(18.803 % of family members)
Environment Ontology (ENVO) Unclassified
(31.624 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(62.393 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 53.12%    β-sheet: 0.00%    Coil/Unstructured: 46.88%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.43
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 117 Family Scaffolds
PF01784NIF3 40.17
PF02113Peptidase_S13 4.27
PF00479G6PD_N 3.42
PF13460NAD_binding_10 2.56
PF12697Abhydrolase_6 0.85
PF00561Abhydrolase_1 0.85
PF02622DUF179 0.85
PF02781G6PD_C 0.85
PF03551PadR 0.85
PF00211Guanylate_cyc 0.85
PF00282Pyridoxal_deC 0.85
PF02798GST_N 0.85
PF02518HATPase_c 0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 117 Family Scaffolds
COG0327Putative GTP cyclohydrolase 1 type 2, NIF3 familyCoenzyme transport and metabolism [H] 40.17
COG3323PII-like insert in the uncharacterized protein YqfO, YbgI/NIF3 familyFunction unknown [S] 40.17
COG0364Glucose-6-phosphate 1-dehydrogenaseCarbohydrate transport and metabolism [G] 4.27
COG2027D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 4.27
COG0076Glutamate or tyrosine decarboxylase or a related PLP-dependent proteinAmino acid transport and metabolism [E] 0.85
COG1678Putative transcriptional regulator, AlgH/UPF0301 familyTranscription [K] 0.85
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 0.85
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 0.85
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 0.85
COG2114Adenylate cyclase, class 3Signal transduction mechanisms [T] 0.85

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A57.26 %
All OrganismsrootAll Organisms42.74 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908043|A2_c1_ConsensusfromContig48040All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium612Open in IMG/M
3300000878|AL9A1W_1217396Not Available622Open in IMG/M
3300001664|P5cmW16_1016540All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1422Open in IMG/M
3300002568|C688J35102_120471949Not Available1096Open in IMG/M
3300004643|Ga0062591_102198594Not Available574Open in IMG/M
3300005177|Ga0066690_10831361Not Available597Open in IMG/M
3300005179|Ga0066684_10963925Not Available553Open in IMG/M
3300005184|Ga0066671_11023006Not Available519Open in IMG/M
3300005329|Ga0070683_100112564All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia2568Open in IMG/M
3300005329|Ga0070683_101654582Not Available615Open in IMG/M
3300005334|Ga0068869_100612756All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria921Open in IMG/M
3300005337|Ga0070682_101059090Not Available677Open in IMG/M
3300005338|Ga0068868_100216675Not Available1601Open in IMG/M
3300005341|Ga0070691_10956520Not Available532Open in IMG/M
3300005354|Ga0070675_100397698Not Available1229Open in IMG/M
3300005365|Ga0070688_101636950Not Available526Open in IMG/M
3300005366|Ga0070659_101238373Not Available661Open in IMG/M
3300005434|Ga0070709_10823826All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium730Open in IMG/M
3300005435|Ga0070714_100222674All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1735Open in IMG/M
3300005437|Ga0070710_11009482Not Available607Open in IMG/M
3300005439|Ga0070711_100369750Not Available1157Open in IMG/M
3300005440|Ga0070705_101076071Not Available657Open in IMG/M
3300005546|Ga0070696_100344321Not Available1153Open in IMG/M
3300005547|Ga0070693_100128319Not Available1582Open in IMG/M
3300005549|Ga0070704_102159708Not Available518Open in IMG/M
3300005555|Ga0066692_10745126Not Available605Open in IMG/M
3300005563|Ga0068855_102596833Not Available503Open in IMG/M
3300005577|Ga0068857_101261356Not Available716Open in IMG/M
3300005587|Ga0066654_10044282Not Available1934Open in IMG/M
3300005614|Ga0068856_102435419Not Available530Open in IMG/M
3300005616|Ga0068852_100836428All Organisms → cellular organisms → Bacteria936Open in IMG/M
3300005719|Ga0068861_102313370Not Available539Open in IMG/M
3300005764|Ga0066903_100238965All Organisms → cellular organisms → Bacteria2783Open in IMG/M
3300005834|Ga0068851_10117940Not Available1424Open in IMG/M
3300006028|Ga0070717_10046929All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei3536Open in IMG/M
3300006028|Ga0070717_10821464Not Available846Open in IMG/M
3300006034|Ga0066656_10589844All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium720Open in IMG/M
3300006046|Ga0066652_101592225All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium601Open in IMG/M
3300006163|Ga0070715_10206769All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1001Open in IMG/M
3300006173|Ga0070716_100497301All Organisms → cellular organisms → Bacteria899Open in IMG/M
3300006175|Ga0070712_100193594All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium Pla1331593Open in IMG/M
3300006175|Ga0070712_100792519Not Available813Open in IMG/M
3300006175|Ga0070712_101992274Not Available509Open in IMG/M
3300006358|Ga0068871_101699495Not Available599Open in IMG/M
3300006794|Ga0066658_10442293Not Available707Open in IMG/M
3300006806|Ga0079220_10304452Not Available987Open in IMG/M
3300006806|Ga0079220_11786691Not Available541Open in IMG/M
3300006854|Ga0075425_100017618All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei7764Open in IMG/M
3300006903|Ga0075426_10004499All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales9891Open in IMG/M
3300006954|Ga0079219_10252677All Organisms → cellular organisms → Bacteria1050Open in IMG/M
3300009162|Ga0075423_10706658Not Available1064Open in IMG/M
3300009162|Ga0075423_12790013Not Available535Open in IMG/M
3300009545|Ga0105237_11754748Not Available628Open in IMG/M
3300009551|Ga0105238_13065782Not Available501Open in IMG/M
3300009553|Ga0105249_13078443Not Available536Open in IMG/M
3300010371|Ga0134125_10231675All Organisms → cellular organisms → Bacteria2053Open in IMG/M
3300010371|Ga0134125_10403436All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei1516Open in IMG/M
3300011998|Ga0120114_1056641Not Available765Open in IMG/M
3300012004|Ga0120134_1045965All Organisms → cellular organisms → Bacteria749Open in IMG/M
3300012019|Ga0120139_1075954All Organisms → cellular organisms → Bacteria823Open in IMG/M
3300012951|Ga0164300_10209439All Organisms → cellular organisms → Bacteria961Open in IMG/M
3300012955|Ga0164298_11380032Not Available544Open in IMG/M
3300012957|Ga0164303_11168015Not Available561Open in IMG/M
3300012958|Ga0164299_10029544All Organisms → cellular organisms → Bacteria2365Open in IMG/M
3300012985|Ga0164308_10224471All Organisms → cellular organisms → Bacteria1448Open in IMG/M
3300012988|Ga0164306_10935760All Organisms → cellular organisms → Bacteria709Open in IMG/M
3300012989|Ga0164305_10841464Not Available765Open in IMG/M
3300012989|Ga0164305_11196036All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300013104|Ga0157370_10261386All Organisms → cellular organisms → Bacteria1600Open in IMG/M
3300013307|Ga0157372_10382005Not Available1641Open in IMG/M
3300013307|Ga0157372_11701275All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium726Open in IMG/M
3300013766|Ga0120181_1025483Not Available1460Open in IMG/M
3300013766|Ga0120181_1136381Not Available534Open in IMG/M
3300013770|Ga0120123_1009933All Organisms → cellular organisms → Bacteria → Terrabacteria group1819Open in IMG/M
3300013772|Ga0120158_10358007All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium684Open in IMG/M
3300014052|Ga0120109_1088807All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium711Open in IMG/M
3300014488|Ga0182001_10173584Not Available761Open in IMG/M
3300014745|Ga0157377_10578469Not Available798Open in IMG/M
3300014969|Ga0157376_11726440Not Available661Open in IMG/M
3300015262|Ga0182007_10268263Not Available617Open in IMG/M
3300015371|Ga0132258_10005743All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria24446Open in IMG/M
3300015371|Ga0132258_10582812All Organisms → cellular organisms → Bacteria2807Open in IMG/M
3300015374|Ga0132255_100226491All Organisms → cellular organisms → Bacteria2659Open in IMG/M
3300018431|Ga0066655_10209185Not Available1213Open in IMG/M
3300020069|Ga0197907_11348646All Organisms → cellular organisms → Bacteria2223Open in IMG/M
3300020070|Ga0206356_11658504All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2249Open in IMG/M
3300020081|Ga0206354_10117231All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2177Open in IMG/M
3300020082|Ga0206353_11541958Not Available844Open in IMG/M
3300025505|Ga0207929_1067652Not Available675Open in IMG/M
3300025898|Ga0207692_10803171Not Available615Open in IMG/M
3300025903|Ga0207680_10922114All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium626Open in IMG/M
3300025906|Ga0207699_11135858Not Available578Open in IMG/M
3300025906|Ga0207699_11331902Not Available531Open in IMG/M
3300025912|Ga0207707_10144252All Organisms → cellular organisms → Bacteria2081Open in IMG/M
3300025915|Ga0207693_11393801Not Available521Open in IMG/M
3300025920|Ga0207649_10340185Not Available1108Open in IMG/M
3300025924|Ga0207694_10216280Not Available1562Open in IMG/M
3300025924|Ga0207694_10556286All Organisms → cellular organisms → Bacteria963Open in IMG/M
3300025927|Ga0207687_10037388All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales3312Open in IMG/M
3300025927|Ga0207687_11308278Not Available623Open in IMG/M
3300025928|Ga0207700_10137920All Organisms → cellular organisms → Bacteria2000Open in IMG/M
3300025928|Ga0207700_12022104Not Available503Open in IMG/M
3300025929|Ga0207664_10080985All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2640Open in IMG/M
3300025932|Ga0207690_10510398All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium973Open in IMG/M
3300025939|Ga0207665_10866326All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium716Open in IMG/M
3300025945|Ga0207679_10978675Not Available775Open in IMG/M
3300026023|Ga0207677_10057611All Organisms → cellular organisms → Bacteria2669Open in IMG/M
3300026078|Ga0207702_11568443All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium652Open in IMG/M
3300026078|Ga0207702_12263077All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium532Open in IMG/M
3300026142|Ga0207698_10646452All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1047Open in IMG/M
3300026142|Ga0207698_11653945Not Available656Open in IMG/M
3300027725|Ga0209178_1431042Not Available505Open in IMG/M
3300028782|Ga0307306_10191271Not Available583Open in IMG/M
3300028787|Ga0307323_10308836Not Available568Open in IMG/M
3300028875|Ga0307289_10271439Not Available698Open in IMG/M
3300031939|Ga0308174_10008703All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5728Open in IMG/M
3300032074|Ga0308173_11337756Not Available671Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere18.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.40%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost8.55%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere7.69%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.84%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere3.42%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil3.42%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere3.42%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.42%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere3.42%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.42%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.56%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.56%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.56%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.71%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.71%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.71%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.85%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil0.85%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.85%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.85%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.85%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.85%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.85%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.85%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908043Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2EnvironmentalOpen in IMG/M
3300000878Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-5 cm-9A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001664Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - 5cm_reassembledEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005834Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300011998Permafrost microbial communities from Nunavut, Canada - A30_35cm_6MEnvironmentalOpen in IMG/M
3300012004Permafrost microbial communities from Nunavut, Canada - A30_5cm_6MEnvironmentalOpen in IMG/M
3300012019Permafrost microbial communities from Nunavut, Canada - A7_5cm_12MEnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013766Permafrost microbial communities from Nunavut, Canada - A26_65cm_6MEnvironmentalOpen in IMG/M
3300013770Permafrost microbial communities from Nunavut, Canada - A15_5cm_18MEnvironmentalOpen in IMG/M
3300013772Permafrost microbial communities from Nunavut, Canada - A10_80_0.25MEnvironmentalOpen in IMG/M
3300014052Permafrost microbial communities from Nunavut, Canada - A23_35cm_12MEnvironmentalOpen in IMG/M
3300014488Bulk soil microbial communities from Mexico - San Felipe (SF) metaGEnvironmentalOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015262Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300020069Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020081Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020082Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025505Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027725Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300028782Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
A2_c1_004307002124908043SoilMEERVSLESRLAGHLPPPSGPLRRDAFVRPPGGLRRRILAQIDRAVEIFEVDRLLYDIEIDAQQRWLRRMMAFDAYCARRDAARESGRPAPP
AL9A1W_121739613300000878PermafrostSMRNASGMEQRVSLESRLAGHLPPRSEPLRREAFERSATGGLRHRILAQVDRAVEIFEVDRLLYDIEIDAQQRWLRRMMAFDAYYARREATRTSGRPAEPPVR*
P5cmW16_101654033300001664PermafrostMLPGMEERVSLESRLAGHLPPRSEPLRRESFDRPGTGGLRHRILAQVDRAIEIFEVDRLLYDIEIEAQQRWLRRMMAFDAYYARRESARASGQPAEPPVR*
C688J35102_12047194913300002568SoilMLPGMEERVSLQQRLEGHLPPPSGPLRREAFTRPAAGGLRARILAQIDRAVEIFEVDRMLYDIEVEAQHLWLRRMMAFDAYCARRDAARGSGRPGPPPVR*
Ga0062591_10219859423300004643SoilMLPGMEERVSLQQRLEGYLPPASGNLRREAFARPAAGGLRARILAQIDRAVEIFEVDRLLYDIEVEAQGRWLRRMMAFDAYCARRDATRGSGRPGPPPVR*
Ga0066690_1083136113300005177SoilPNGWSHHPTRCAGATRCAMLADMEERVSLQQRLQGHLRSPGGDISREAFTRPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQARPPVR*
Ga0066684_1096392523300005179SoilMEARVSLQKRLEGHLPPPSGSLSREAFTRPVTGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQARPPVR*
Ga0066671_1102300623300005184SoilMLADMEERVSLQKRLEGHLRPPGGNVSREAFTRPATGGLRARILAQIDHAVEIFEVGRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARASGRPPRPPVR*
Ga0070683_10011256443300005329Corn RhizosphereMLPDMEERVSLQKRLEGHLPPPGGSIDREAFTRPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR*
Ga0070683_10165458223300005329Corn RhizosphereMLPGMEERVSLQKRLEGHLPPPPESVNREAFSRPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR*
Ga0068869_10061275613300005334Miscanthus RhizosphereSAKPTISSLWATRVRYRPNGWSHHPTRCAVATPCAMLPGMEERVSLQKRLEGHLPPPPESVNREAFSRPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR*
Ga0070682_10105909013300005337Corn RhizosphereRIRYRPNGWSHHPTRCAGARACAMLPGMEERVSLQQRLEGHLPPPAGPLRREAFTRPTAGGLRARILAQIDRAVEIFEVDRMLYDIEVEALHRWLRRMMAFDAYCARRDAARGSGRPGPPPVP*
Ga0068868_10021667523300005338Miscanthus RhizosphereMLPGMEERVSLQKRLEGHLPPPSGGLRREAFSRPIVDGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR*
Ga0070691_1095652013300005341Corn, Switchgrass And Miscanthus RhizosphereMLPDMEERVSLQKRLEGHLPPPGGSIDREAFTRPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRD
Ga0070675_10039769833300005354Miscanthus RhizosphereMLPGMEERVSLQKRLEGHLPPPSGGLRREAFSRPIVDGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDVARGSGQQSPPPVR*
Ga0070688_10163695023300005365Switchgrass RhizosphereMEERVSLQKRLEGHLPPPPESVSREAFARPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCAR
Ga0070659_10123837313300005366Corn RhizosphereMEERVSLQKRLEGHLPPPPESVSREAFARPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR*
Ga0070709_1082382623300005434Corn, Switchgrass And Miscanthus RhizosphereMEERLSLSDRLAGHLPPPSAPLRRDAFARPATGGLRRRITAQIDRAVEIFEVDRLLYDIEVEAQGRWLRRMMAFDAYCARRDGAQATGRRGAPPVR*
Ga0070714_10022267433300005435Agricultural SoilMEERVSLQKRLEGHLPPPSGGLRREAFSRPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR*
Ga0070710_1100948213300005437Corn, Switchgrass And Miscanthus RhizosphereMLPWMEERVSLSDRLAGHLPPPSAPLRRDAFARPATGGLRRRITAQIDRAVEIFEVDRLLYDIEVEAQGRWLRRMMAFDAYCARRDGAQATGRRGAPPVR*
Ga0070711_10036975023300005439Corn, Switchgrass And Miscanthus RhizosphereMLPWMEERVSLASRLEGHLPPPSRPVQREAFTRPDTAGLRGRIMAQIDRAVAIFEVDRLLYDIEIDAQQRWLRRMMAFDAYCARREAVQKSGQPGPPPVR*
Ga0070705_10107607113300005440Corn, Switchgrass And Miscanthus RhizosphereMLPGMEERVSLQKRLEGHLPPPSGGLRREAFSRPIVDGLRARILAQIDHAVEIFEVERLLYDIEVEAQHRWLRRMMAFDAYCARRDVARGSGQQSPPPVR*
Ga0070696_10034432113300005546Corn, Switchgrass And Miscanthus RhizosphereQKRLEGHLPPPGGSIDREAFTRPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR*
Ga0070693_10012831913300005547Corn, Switchgrass And Miscanthus RhizosphereMLPGMEERVSLQQRLEGHLPPPPESVSREAFARPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAACGSGQQSRPPVR*
Ga0070704_10215970813300005549Corn, Switchgrass And Miscanthus RhizosphereASACSSPSAKATISSLPATRVRYRPNGWSHHPTRCAVATPCAMLPGMEERVSLQKRLEGHLPPPPESVNREAFSRPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDVARGSGQQSPPPVR*
Ga0066692_1074512613300005555SoilMEARVSLQKRLEGHLPPPLGSLSREAFTRPVTGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRGMMAFDAYCARRDAARGSGQRARPPVR*
Ga0068855_10259683323300005563Corn RhizosphereAKATISSLWATRIRYRPNGWSHHPTRCARAARCAMLPGMEERVSLQKRLEGHLPPPSGGLRREAFSRPIVDGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR*
Ga0068857_10126135623300005577Corn RhizosphereTGRASGYASACNSPSAKPTISSLWATRVRYRPNGWSHHPTRCAVATPCAMLPGMEERVSLQKRLEGHLPPPPESVNREAFSRPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR*
Ga0066654_1004428223300005587SoilMLSGMEERVSLRKRLEGHLPPPPGGLRREAFSRPAVDGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSAPPVR*
Ga0068856_10243541913300005614Corn RhizosphereSPSAKATISSLWATRIRYRPNGWSHHPTRCARAARCAMLPDMEERVSLQKRLEGHLPPPGGSIDREAFTRPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR*
Ga0068852_10083642813300005616Corn RhizosphereHPTRCAGARACAMLPGMEERVSLQQRLEGHLPPPAGPLRREAFTRPAAGGLRARILAQIDRAVEIFEVDRMLYDIEVEALHRWLRRMMAFDAYCARRDAARGSGRPGPPPVP*
Ga0068861_10231337013300005719Switchgrass RhizosphereMLPGMEERVSLQKRLEGHLPPPSGGLRREAFSRPIVDGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAAR*
Ga0066903_10023896523300005764Tropical Forest SoilMLPGMDERMSLQKRLEGHLPPPGGSISREAFTRPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSRPPVR*
Ga0068851_1011794033300005834Corn RhizosphereMLPGMEERVSLQKRLEGHLPPPPESVNREAFSRPATGGPRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR*
Ga0070717_1004692933300006028Corn, Switchgrass And Miscanthus RhizosphereMEERVSLERRLAGHLPPAVGPLRREAFVRPPGGLRRRIQVQIDRAVEIFEVERLLYDIEVDAQQRWLRRMMAFDAYCARRDAKRASGRPASPPVR*
Ga0070717_1082146433300006028Corn, Switchgrass And Miscanthus RhizosphereMLPGMEERVSLEKRLEGHLQPPSGGLRREAFSRPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR*
Ga0066656_1058984423300006034SoilMLPDMEERVSLQKRLEGHLLPPSGGLRREAFSRPAVDGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQSSPPPVR*
Ga0066652_10159222513300006046SoilMLADMEERVSLQQRLQGHLRSPGGDISREAFTRPATGGLRARILAQIDHAVEIFEVGRLLYDIEVEAQHRWLRRMMAFDAYCARRDAA
Ga0070715_1020676923300006163Corn, Switchgrass And Miscanthus RhizosphereMLPGMEERVSLEQRLEGHLAPPSPNLRREAFARPASGGLRARILAQIDQAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGRQSPPPVR*
Ga0070716_10049730113300006173Corn, Switchgrass And Miscanthus RhizosphereWSHHPTRCGPAAECAMLRGMEERVSLESRLAGHLPPPTGALRREAFTRPAGGGLRGRIMAQIDRAVEIFEVDRLLYDIEIDAQERWLRRMMAFDAYCARRDAVRESGRPALPPVR*
Ga0070712_10019359413300006175Corn, Switchgrass And Miscanthus RhizosphereCARATGCAMLPGMEERVSLEQRLEGHLAPPSPNLRREAFARPASGGLRARILAQIDQAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGRQSPPPVR*
Ga0070712_10079251923300006175Corn, Switchgrass And Miscanthus RhizosphereMLPWMEERVSLSDRLAGHLPPPSAPLRRDAFARPATGGLRRRITAQIDRAVEIFEIDRLLYDIEVEAQGRWLRRMMAFDAYCARREARASGRPGPPPVR*
Ga0070712_10199227413300006175Corn, Switchgrass And Miscanthus RhizosphereACSSPSAKATISSLPATRVPYRPIGWSHHPTRCEPVAACAMLPRMEERVSLERRLAGHLPPAAGPLRREAFVRPPGGLRRRIQAQIDRAVEIFEVERLLYDIEVDAQQRWLRRMMAFDAYCARRDAKRASGRPASPPVR*
Ga0068871_10169949513300006358Miscanthus RhizosphereRCAMLPGMEERVSLQKRLEGHLPPPSGGLRREAFSRPIVDGLRARILAQIDHAVEIFEVERLLYDIEVEAQHRWLRRMMAFDAYCARRDVARGSGQQSPPPVR*
Ga0066658_1044229313300006794SoilMLPDMEERVSLQKRLEGHLLPPSGGLRREAFSRPAVDGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQARPPVR*
Ga0079220_1030445213300006806Agricultural SoilMLPGMEERVSLQQRLEGHLPPPAGPLRREAFTRPATGGLRARILAQIDRAVEIFEVDRMLYDIEVEALHRWLRRMMAFDAYCARRDAARGSGRPGPPPVR*
Ga0079220_1178669123300006806Agricultural SoilMLPGMEERVSLQKRLEGHLPPPPERVNREAFSRPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR*
Ga0075425_10001761893300006854Populus RhizosphereMLPGMEERVSLQKRLEGHLPPPPESVNREAFSRPATGGLRARILIQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR*
Ga0075426_10004499103300006903Populus RhizosphereMLPGMEERVSLQKRLEGHLPPPPESVNREAFSRPATGGLRARILIQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSG*
Ga0079219_1025267723300006954Agricultural SoilMLPGMEERVSLQQRLEGHLPPPAGPLRREAFTRPAAGGLRARILAQIDRAVEIFEVDRMLYDIEVEALHRWLRRMMAFDAYCARRDAARGSGRPGPPPVR*
Ga0075423_1070665813300009162Populus RhizosphereLEGHLPPPPESVNREAFSRPATGGLRARILIQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR*
Ga0075423_1279001323300009162Populus RhizosphereMEARVSLQERLEGHLPPPSEGLRREAFSRPAVGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQGRWLRRMMAFDAYCARRDATRGSGRPGPPPVR*
Ga0105237_1175474813300009545Corn RhizosphereMLPGMEERVSLQQRLEGHLPPPAGPLRREAFTRPAAGGLRARILAQIDRAVEIFEVDRMLYDIEVEALHRWLRRMMAFDAYCARRDAARGSGRPGPPPVP*
Ga0105238_1306578223300009551Corn RhizosphereMEERVSLQQRLEGHLPPPAGPLRREAFTRPAAGGLRARILAQIDRAVEIFEVDRMLYDIEVEALHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR*
Ga0105249_1307844323300009553Switchgrass RhizosphereMEERVSLQQRLEGHLPPPAGPLRREAFTRPAAGGLRARILAQIDRAVEIFEVDRLLYDIEVEAQQRWLRRMMAFDAYCARRDAAARGSGRPGPPPVR*
Ga0134125_1023167533300010371Terrestrial SoilMEERVSLEQRLEGHLAPPSPNLRREAFARPASGGLRARILAQIDQAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGRQSPPPVR*
Ga0134125_1040343633300010371Terrestrial SoilMEERVSLQKRLEGHLPPPPASVSRESFTRPVTSGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR*
Ga0120114_105664123300011998PermafrostMEERVSLESRLAGHLPPRSEPLRRESFDRPGTGGLRHRILAQVDRAIEIFEVDRLLYDIEIEAQQRWLRRMMAFDAYYARREATRTSGRPAGPPTAMAIESGNGKPASAPWSCR
Ga0120134_104596513300012004PermafrostMEQRVSLESRLAGHLPPRSEPLRREAFERSATGGLRHRILAQVDRAVEIFEVDRLLYDIEIDAQQRWLRRMMAFDAYYARRESARASGQPAEPPVR*
Ga0120139_107595423300012019PermafrostMEERVSLESRLAGHLPPRSEPLRRESFDRPGTGGLRHRILAQVDRAIEIFEVDRLLYDIEIEAQQRWLRRMMAFDAYYARRESARASGQPAEPPVR*
Ga0164300_1020943913300012951SoilRVSLEQRLEGHLAPPSPNLRREAFARPASGGLRARILAQIDQAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGRQSPPPVR*
Ga0164298_1138003223300012955SoilRATGCAMLPGMEERVSLEQRLEGHLAPPSPNLRREAFARPASGGLRARILAQIDQAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGRQSPPPVR*
Ga0164303_1116801513300012957SoilMLPGMEERVSLEQRLEGHLAPPSPNLRREAFARPASGGLRARILAQIDQAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGRQSPPPVRSSRVPGAWRSLVA
Ga0164299_1002954443300012958SoilMLPGMEERVSLEQRLEGHLAPPSPNHRREAFARPASGGLRARILAQIDQAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGRQSPPPVR*
Ga0164308_1022447123300012985SoilMEERVSLEQRLEGHLAPPSPNLRREAFARPASGGLRARILAQIDQAVEIFEVDRLLYDIAVEAQHRWLRRMMAFDAYCARRDAARGSGRQSPPPVR*
Ga0164306_1093576013300012988SoilAMLPWMEERVSLASRLEGHLPPPSRPVRREAFTRPDPAGLRGRILAQIDRAVEIFEVERLLYDIEIDAQQRWLRRMMAFDAYCARRDGARATGRRGAPPVR*
Ga0164305_1084146423300012989SoilMEERVSLQKRLEGHLPPPPASVSRESFTRPVTSGLRARILDQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR*
Ga0164305_1119603613300012989SoilRYRPNGWSHHPTRCARATGCAMLPGMEERVSLEQRLEGHLAPPSPNLRREAFARPASGGLRARILAQIDQAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGRQSPPPVR*
Ga0157370_1026138633300013104Corn RhizosphereMLPDMEERVSLQKRLEGHLPPPRGSIDREAFTRPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR*
Ga0157372_1038200523300013307Corn RhizosphereMLPGMEERVSLQKRLKGHLPPPSGGLRREAFSRPIVDGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR*
Ga0157372_1170127513300013307Corn RhizosphereMLPGMEERVSLQQRLEGHLPPPAGPLRREAFTRPAAGGLRARILAQIDRAVEIFEVDRMLYDIEVEALHRWLRRMMAFDAYCARRDAARGSGRPGPPPV
Ga0120181_102548343300013766PermafrostMEQRVSLESRLAGHLPPRSEPLRRESFDRPGTGGLRHRILAQVDRAIEIFEVDRLLYDIEIEAQQRWLRRMMAFDAYYARRESARASGQPAEPPVR*
Ga0120181_113638123300013766PermafrostMRNASGMEQRVSLESRLAGHLPPRSEPLRREAFERSATGGLRHRILAQVDRAVEIFEVDRLLYDIEIDAQQRWLRRMMAFDAYYARREATRTSGRPAQPPVR*
Ga0120123_100993323300013770PermafrostMLAGMEERVSLESRLAGHLPPRSEPLRRESFDRPGTGGLRHRILAQVDRAIEIFEVDRLLYDIEIEAQQRWLRRMMAFDAYYARRESARASGQPAEPPVR*
Ga0120158_1035800713300013772PermafrostMLHEMEQRVSLESRLAGHLQPRAEPLRRESFDRPGTGGLRHRILAQVDRAIEIFEVDRLLYDIEIEAQQRWLRRMMAFDAYYARRESARASGQPAEPPVR*
Ga0120109_108880723300014052PermafrostMRNASGMEQRVSLESRLAGHLPPRSEPLRREAFERSATGGLRHRILAQVDRAVEIFEVDRLLYDIEIDAQQRWLRRMMAFDAYYARREATRTSGRPAEPPVR*
Ga0182001_1017358423300014488SoilMEERESLEQRLQGHLPPPSGPLRREAFTRPAAGGRRTRMQAQIDRAVEIFEVDRMLYDIEVEAQGRWLRRMMAFDAYCARRDAARGNGRPGSPPVR*
Ga0157377_1057846913300014745Miscanthus RhizosphereKRLEGHLPPPSGGLRREAFSRPIVDGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR*
Ga0157376_1172644023300014969Miscanthus RhizosphereMEERVSLQKRLEGHLPPPPESVSREAFARPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGRQSPPPVR*
Ga0182007_1026826323300015262RhizosphereMLPGMEERVSLERRLEGHLPPPSGPLRREAFTRPAAGGLRTRILAQIDRAVEIFEVDRMLYDIEIEAQGRWLRRMMAFDAYCARRDAARGSGRPDPPPVR*
Ga0132258_1000574373300015371Arabidopsis RhizosphereMEERVSLQKRLEGHLPPPPESVSREAFARPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAACGSGQQSRPPVR*
Ga0132258_1058281243300015371Arabidopsis RhizosphereMEERVSLANRLAGHMPPPSRPLRREAFATPGGDTLRRRIVAQIDRAVEIFEVDRLLYDIEVDAQQRWLRRMMAFDAYCARREARASGRPGPPPVR*
Ga0132255_10022649143300015374Arabidopsis RhizosphereMEERVSLQKRLEGHLPPPPESVSREAFARPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAACGSGQQSPPPVR*
Ga0066655_1020918523300018431Grasslands SoilMLPGMEERVSLQRRLEGHLPPPSGPLRREAFTRPAESGLRARILAQIDRAVEVFEVDRMLYDIEVEAQGRWLRRMMAFDAYCARRDAARGSGRPGPPPVR
Ga0197907_1134864613300020069Corn, Switchgrass And Miscanthus RhizosphereMLPDMKARVSLQKRLEGHLPPPGGSIDREAFTRPATGGLRARILAQIDQAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR
Ga0206356_1165850443300020070Corn, Switchgrass And Miscanthus RhizosphereMEERVSLQKRLEGHLPPPRGSIDREAFTRPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR
Ga0206354_1011723113300020081Corn, Switchgrass And Miscanthus RhizospherePGMEERVSLQKRLEGHLPPPPESVNREAFSRPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR
Ga0206353_1154195813300020082Corn, Switchgrass And Miscanthus RhizosphereASACSRPSAKATISSLPATCVRYRPNGWSHHPTRCARAARCAMLPDMEERVSLQKRLEGHLPPPGGSIDREAFTRPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR
Ga0207929_106765223300025505Arctic Peat SoilMLPGMEERVSLESRLAGHLPPPTGALRREAFTRPAGGGLRGRILAQIDRAVEIFEVDRLVYDIEIDAQQRWLRRMMAFDAYCARRDAARESGRPAPPPVR
Ga0207692_1080317123300025898Corn, Switchgrass And Miscanthus RhizosphereMLPWMEERVSLASRLEGHLPPPSRPVQREAFTRPDTAGLRGRIMAQIDRAVAIFEVDRLLYDIEIDAQQRWLRRMMAFDAYCARREAVQKSGQPGPPPVR
Ga0207680_1092211413300025903Switchgrass RhizosphereMLPGMEERVSLQKRLEGHLPPPPESVSREAFARPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAACGSGQQSPPPVR
Ga0207699_1113585823300025906Corn, Switchgrass And Miscanthus RhizosphereMEERLSLSDRLAGHLPPPSAPLRRDAFARPATGGLRRRITAQIDRAVEIFEVDRLLYDIEVEAQGRWLRRMMAFDAYCARRDGAQATGRRGAPPVR
Ga0207699_1133190213300025906Corn, Switchgrass And Miscanthus RhizosphereMLPGMEERVSLQKRLEGHLPPPPASVSRESFTRPVTSGLRARILDQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGRQSPPPVR
Ga0207707_1014425243300025912Corn RhizosphereMLPDMEERVSLQKRLEGHLPPPGGSIDREAFTRPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR
Ga0207693_1139380123300025915Corn, Switchgrass And Miscanthus RhizosphereMLPWMEERVSLSDRLAGHLPPPSAPLRRDAFARPATGGLRRRITAQIDRAVEIFEIDRLLYDIEVEAQGRWLRRMMAFDAYCARRDGARPTGRRGAPPVR
Ga0207649_1034018533300025920Corn RhizosphereGHLPPPGGSIDREAFTRPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR
Ga0207694_1021628033300025924Corn RhizosphereMLPGMEERVSLQKRLEGHLPPPPESVNREAFSRPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR
Ga0207694_1055628623300025924Corn RhizosphereMEERVSLQKRLEGHLPPPGGSIDREAFTRPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR
Ga0207687_1003738833300025927Miscanthus RhizosphereMLPGMEERVSLQKRLEGHLPPPSGGLRREAFSRPIVDGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR
Ga0207687_1130827813300025927Miscanthus RhizosphereMLPGMEERVSLQKRLEGHLPPPPESVNREAFSRPATGGLRARILVQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGRQSPPPVR
Ga0207700_1013792013300025928Corn, Switchgrass And Miscanthus RhizosphereMLPGMEERVSLEQRLEGHLAPPSPNLRREAFARPASGGLRARILAQIDQAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGRQSPPPVR
Ga0207700_1202210413300025928Corn, Switchgrass And Miscanthus RhizosphereEGHLPPPSGGLRREAFSRPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR
Ga0207664_1008098533300025929Agricultural SoilMLPGMEERVSLEKRLEGHLPPPSGGLRREAFSRPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAACGSGQQSPPPVR
Ga0207690_1051039833300025932Corn RhizosphereMLPGMEERVSLQKRLEGHLPPPPESVSREAFARPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR
Ga0207665_1086632623300025939Corn, Switchgrass And Miscanthus RhizosphereMLPWMEERVSLSDRLAGHLPPPSAPLRRDAFARPATGGLRRRITAQIDRAVEIFEVDRLLYDIEVEAQGRWLRRMMAFDAYCARRDGAQATGRRGAPPVR
Ga0207679_1097867533300025945Corn RhizospherePCAMLPGMEERVSLQKRLEGHLPPPPESVNREAFSRPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR
Ga0207677_1005761123300026023Miscanthus RhizosphereMLPGMEERVSLQKRLEGHLPPPSGGLRREAFSRPIVDGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDVARGSGQQSPPPVR
Ga0207702_1156844323300026078Corn RhizosphereMLPGMEERVSLQKRLEGHLPPPSGGLRRQAFSRPIVDGLRARILAQIDHAVEIFEVERLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR
Ga0207702_1226307723300026078Corn RhizosphereMLPGMEERVSLQQRLEGHLPPPPESVSREAFARPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYC
Ga0207698_1064645223300026142Corn RhizosphereMLPGMEERVSLQQRLEGHLPPPAGPLRREAFTRPAAGGLRARILAQIDRAVEIFEVDRMLYDIEVEALHRWLRRMMAFDAYCARRDAARGSGRPGPPPVP
Ga0207698_1165394513300026142Corn RhizosphereMLPGMEERVSLQKRLEGHLPPPPESVNREAFSRPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDA
Ga0209178_143104223300027725Agricultural SoilATRVRYRPNGWSHHPTRCAVATPCAMLPGMEERVSLQKRLEGHLPPPPESVNREAFSRPATGGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR
Ga0307306_1019127113300028782SoilSACSSPSAKATISSLPATRVRYRPNGWSHHPTRCAGACAYAMLPGMEERVSLQKRLEGHLPPPSGSLRREAFTRPATGGLRGRILAQIDRAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAAARGSGRPAPPPVR
Ga0307323_1030883613300028787SoilVRYRPNGWSHHPTRCAGACAYAMLPGMEERVSLQKRLEGHLPPSSGSLRREAFTRPATGGLRGRILAQIDRAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAAARGSGRPAPPPVR
Ga0307289_1027143923300028875SoilMLPGMEERVSLQKRLEGHLPPPSGSLRREAFTRPASGGLRGRILAQIDRAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAAARGSGRPAPPPV
Ga0308174_1000870313300031939SoilGAPPCAMLPGMEERVSLQKRLAGHLPPPGGSINREAFTRPATSGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR
Ga0308173_1133775623300032074SoilMLPGMEERVSLQKRLAGHLPPPGGSINREAFTRPATSGLRARILAQIDHAVEIFEVDRLLYDIEVEAQHRWLRRMMAFDAYCARRDAARGSGQQSPPPVR

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.