NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F077875

Metagenome / Metatranscriptome Family F077875

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F077875
Family Type Metagenome / Metatranscriptome
Number of Sequences 117
Average Sequence Length 52 residues
Representative Sequence MRFLLGFLFGASYSGNRAFRVAFLLILLFLAFCLYQMSKPLGHNGRVTQPSAQVR
Number of Associated Samples 94
Number of Associated Scaffolds 117

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 91.45 %
% of genes near scaffold ends (potentially truncated) 31.62 %
% of genes from short scaffolds (< 2000 bps) 77.78 %
Associated GOLD sequencing projects 86
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (79.487 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(29.060 % of family members)
Environment Ontology (ENVO) Unclassified
(32.479 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(50.427 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 40.96%    β-sheet: 0.00%    Coil/Unstructured: 59.04%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 117 Family Scaffolds
PF16793RepB_primase 9.40
PF11657Activator-TraM 6.84
PF00437T2SSE 2.56
PF11843DUF3363 1.71
PF01656CbiA 1.71
PF03135CagE_TrbE_VirB 1.71
PF13533Biotin_lipoyl_2 1.71
PF02687FtsX 0.85
PF11848DUF3368 0.85
PF00672HAMP 0.85
PF13683rve_3 0.85
PF02698DUF218 0.85
PF11074DUF2779 0.85
PF03551PadR 0.85
PF08447PAS_3 0.85
PF02534T4SS-DNA_transf 0.85
PF01464SLT 0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 117 Family Scaffolds
COG3451Type IV secretory pathway, VirB4 componentIntracellular trafficking, secretion, and vesicular transport [U] 1.71
COG1434Lipid carrier protein ElyC involved in cell wall biogenesis, DUF218 familyCell wall/membrane/envelope biogenesis [M] 0.85
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 0.85
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 0.85
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 0.85
COG2949Uncharacterized periplasmic protein SanA, affects membrane permeability for vancomycinCell wall/membrane/envelope biogenesis [M] 0.85
COG3505Type IV secretory pathway, VirD4 component, TraG/TraD family ATPaseIntracellular trafficking, secretion, and vesicular transport [U] 0.85

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms79.49 %
UnclassifiedrootN/A20.51 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005439|Ga0070711_101632802All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium564Open in IMG/M
3300005529|Ga0070741_10002195All Organisms → cellular organisms → Bacteria53966Open in IMG/M
3300005540|Ga0066697_10515761All Organisms → cellular organisms → Bacteria676Open in IMG/M
3300005541|Ga0070733_10692851All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium684Open in IMG/M
3300005555|Ga0066692_10543109Not Available736Open in IMG/M
3300005569|Ga0066705_10633330Not Available652Open in IMG/M
3300005576|Ga0066708_10379383All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium908Open in IMG/M
3300005764|Ga0066903_104228353All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium768Open in IMG/M
3300006034|Ga0066656_11020510All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium531Open in IMG/M
3300006046|Ga0066652_101957809Not Available524Open in IMG/M
3300006163|Ga0070715_10067324All Organisms → cellular organisms → Bacteria → Proteobacteria1590Open in IMG/M
3300006173|Ga0070716_100256175All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus1195Open in IMG/M
3300006797|Ga0066659_10621216All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium878Open in IMG/M
3300006797|Ga0066659_10907371All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium736Open in IMG/M
3300007265|Ga0099794_10558735All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium604Open in IMG/M
3300009088|Ga0099830_10860863All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium749Open in IMG/M
3300010048|Ga0126373_10513299All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1242Open in IMG/M
3300010341|Ga0074045_10008306All Organisms → cellular organisms → Bacteria8794Open in IMG/M
3300010358|Ga0126370_10102744All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1981Open in IMG/M
3300010359|Ga0126376_12555286All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300010360|Ga0126372_12473739Not Available570Open in IMG/M
3300010360|Ga0126372_12643328Not Available554Open in IMG/M
3300010376|Ga0126381_100164716All Organisms → cellular organisms → Bacteria2928Open in IMG/M
3300011269|Ga0137392_11185395All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium622Open in IMG/M
3300011270|Ga0137391_11297557All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium575Open in IMG/M
3300012198|Ga0137364_10704740All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium762Open in IMG/M
3300012200|Ga0137382_10248887All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1231Open in IMG/M
3300012202|Ga0137363_10571127Not Available953Open in IMG/M
3300012202|Ga0137363_11139891All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium663Open in IMG/M
3300012203|Ga0137399_10630706All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium901Open in IMG/M
3300012203|Ga0137399_11216002All Organisms → cellular organisms → Bacteria → Acidobacteria634Open in IMG/M
3300012205|Ga0137362_10175039All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1843Open in IMG/M
3300012205|Ga0137362_10264564All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1487Open in IMG/M
3300012205|Ga0137362_11688023Not Available520Open in IMG/M
3300012208|Ga0137376_10535400All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1015Open in IMG/M
3300012210|Ga0137378_10182637All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1951Open in IMG/M
3300012285|Ga0137370_10015580All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3726Open in IMG/M
3300012357|Ga0137384_10881375All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium722Open in IMG/M
3300012361|Ga0137360_10170140All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1743Open in IMG/M
3300012363|Ga0137390_12027590All Organisms → cellular organisms → Bacteria → Acidobacteria500Open in IMG/M
3300012582|Ga0137358_10475498All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium843Open in IMG/M
3300012683|Ga0137398_10034920All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2880Open in IMG/M
3300012917|Ga0137395_10052279All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2574Open in IMG/M
3300012917|Ga0137395_10203024All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1380Open in IMG/M
3300012918|Ga0137396_10132668All Organisms → cellular organisms → Bacteria1803Open in IMG/M
3300012923|Ga0137359_10112063All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2415Open in IMG/M
3300012925|Ga0137419_10651823All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium850Open in IMG/M
3300012925|Ga0137419_11438389Not Available583Open in IMG/M
3300012927|Ga0137416_11902870All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium545Open in IMG/M
3300015053|Ga0137405_1095478All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium750Open in IMG/M
3300015054|Ga0137420_1091916All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium4491Open in IMG/M
3300015245|Ga0137409_10076002All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3143Open in IMG/M
3300016319|Ga0182033_10273147Not Available1383Open in IMG/M
3300016341|Ga0182035_10276202All Organisms → cellular organisms → Bacteria1368Open in IMG/M
3300016341|Ga0182035_10317158All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1284Open in IMG/M
3300016357|Ga0182032_10964836All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium727Open in IMG/M
3300016357|Ga0182032_11718920All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium547Open in IMG/M
3300016371|Ga0182034_10610243All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium921Open in IMG/M
3300016371|Ga0182034_10818066All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium798Open in IMG/M
3300016387|Ga0182040_10514339All Organisms → cellular organisms → Bacteria958Open in IMG/M
3300016422|Ga0182039_10246750All Organisms → cellular organisms → Bacteria1452Open in IMG/M
3300016445|Ga0182038_10976430Not Available749Open in IMG/M
3300016445|Ga0182038_11115590All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium701Open in IMG/M
3300017955|Ga0187817_10407334All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium868Open in IMG/M
3300017961|Ga0187778_11122666All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium548Open in IMG/M
3300018433|Ga0066667_10345568All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1180Open in IMG/M
3300018433|Ga0066667_10794354All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium804Open in IMG/M
3300019887|Ga0193729_1006561All Organisms → cellular organisms → Bacteria5457Open in IMG/M
3300020199|Ga0179592_10001256All Organisms → cellular organisms → Bacteria → Acidobacteria10292Open in IMG/M
3300020579|Ga0210407_10474176All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium978Open in IMG/M
3300020579|Ga0210407_11043329Not Available622Open in IMG/M
3300020581|Ga0210399_10038184All Organisms → cellular organisms → Bacteria3843Open in IMG/M
3300020583|Ga0210401_10363487All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1309Open in IMG/M
3300021171|Ga0210405_10254761All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1389Open in IMG/M
3300021178|Ga0210408_10008053All Organisms → cellular organisms → Bacteria8986Open in IMG/M
3300021420|Ga0210394_10000910All Organisms → cellular organisms → Bacteria52849Open in IMG/M
3300021474|Ga0210390_10017300All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus5838Open in IMG/M
3300021559|Ga0210409_10002162All Organisms → cellular organisms → Bacteria23799Open in IMG/M
3300021559|Ga0210409_11259594All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium615Open in IMG/M
3300021560|Ga0126371_13820547Not Available508Open in IMG/M
3300022533|Ga0242662_10270523Not Available558Open in IMG/M
3300025910|Ga0207684_11306137Not Available597Open in IMG/M
3300025939|Ga0207665_10009710All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus6317Open in IMG/M
3300026555|Ga0179593_1116987All Organisms → cellular organisms → Bacteria3581Open in IMG/M
3300027645|Ga0209117_1006731All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3921Open in IMG/M
3300027706|Ga0209581_1000712All Organisms → cellular organisms → Bacteria54047Open in IMG/M
3300027787|Ga0209074_10250505All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium688Open in IMG/M
3300027825|Ga0209039_10417072Not Available511Open in IMG/M
3300027908|Ga0209006_10758708All Organisms → cellular organisms → Bacteria790Open in IMG/M
3300028047|Ga0209526_10213155All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1333Open in IMG/M
3300028536|Ga0137415_10339484All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1306Open in IMG/M
3300031128|Ga0170823_14865927Not Available658Open in IMG/M
3300031718|Ga0307474_11099858Not Available629Open in IMG/M
3300031720|Ga0307469_10264554All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1394Open in IMG/M
3300031754|Ga0307475_10211693All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1551Open in IMG/M
3300031771|Ga0318546_11127893All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium551Open in IMG/M
3300031879|Ga0306919_11349132Not Available539Open in IMG/M
3300031890|Ga0306925_10115678All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2866Open in IMG/M
3300031890|Ga0306925_11551199Not Available646Open in IMG/M
3300031897|Ga0318520_10998110Not Available529Open in IMG/M
3300031910|Ga0306923_11535056All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium695Open in IMG/M
3300031912|Ga0306921_11162805All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium861Open in IMG/M
3300031912|Ga0306921_11700347Not Available682Open in IMG/M
3300031945|Ga0310913_10661010All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium740Open in IMG/M
3300031962|Ga0307479_10017059All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium6832Open in IMG/M
3300031962|Ga0307479_10033998All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium4867Open in IMG/M
3300031962|Ga0307479_11030712Not Available791Open in IMG/M
3300032035|Ga0310911_10554445All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium667Open in IMG/M
3300032261|Ga0306920_100665065All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1537Open in IMG/M
3300032261|Ga0306920_100848437All Organisms → cellular organisms → Bacteria1338Open in IMG/M
3300032261|Ga0306920_103173150Not Available616Open in IMG/M
3300032783|Ga0335079_10019167All Organisms → cellular organisms → Bacteria → Acidobacteria7831Open in IMG/M
3300032892|Ga0335081_10203825All Organisms → cellular organisms → Bacteria2734Open in IMG/M
3300032892|Ga0335081_10638735All Organisms → cellular organisms → Bacteria → Acidobacteria1305Open in IMG/M
3300032898|Ga0335072_10003109All Organisms → cellular organisms → Bacteria25198Open in IMG/M
3300033289|Ga0310914_10167792All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1947Open in IMG/M
3300033289|Ga0310914_11884088Not Available503Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil29.06%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil17.09%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil14.53%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.84%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil5.98%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.13%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.27%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.42%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.56%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.56%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.71%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.85%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.85%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.85%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.85%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.85%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.85%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.85%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300019887Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022533Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026555Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300027645Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027706Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300027825Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031897Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0070711_10163280213300005439Corn, Switchgrass And Miscanthus RhizosphereMRFLLGFLFGASYSGNRAFRVAFLLILLFLAFCLYQMSKPLGHNGRVTQ
Ga0070741_10002195453300005529Surface SoilMRFLLGFLFGASYSGNRAFRVAFLLIILFLAFCLYQMSKPLGHGGRVTPPPAQVR*
Ga0066697_1051576113300005540SoilMRFLLGFLFGASYSGNRAFRVAFLLILLFLAFCLYQMSKPLGHK
Ga0070733_1069285123300005541Surface SoilMRFLLGFLFGASYSGNRAFRVAFLLILLFLAFCLYQMSKPLGHNKRATAPSAQVR*
Ga0066692_1054310923300005555SoilMRFLLGFLFGASYTGNRAFRVAFLLIILFLAFCAYQMSKPLGHNMRVTEPSAQVR*
Ga0066705_1063333023300005569SoilMRFLLGFLFGASYSGNRAFRVAFLLILLFLAFCLYQMSKPLGHNGRVTQPSAQVR*
Ga0066708_1037938313300005576SoilMRFLLGFLFGASYSGNRAFRVAFLLIILFLAFCAYQMSKPLGHNRRVTAPSAEVR*
Ga0066903_10422835313300005764Tropical Forest SoilMRFLLGFIFGAFYTGSRVFRITFLLIVLAMVFGLYQMSKPLGHHRTVSAPVTQTR*
Ga0066656_1102051023300006034SoilMRFLLGFLFGASYSGNRAFRIAFLLILLFLAFCLYQMSKPLG
Ga0066652_10195780923300006046SoilMRFLLGFLFGASYSGNRAFRIAFLLILLFLAFCLYQMSKPLGHKGRIAQPSAQVR*
Ga0070715_1006732433300006163Corn, Switchgrass And Miscanthus RhizosphereMRFLLGFLFGASYSGNRAFRVAFLLIILFLAFCAYQMSKPLGHNRRVTAPSAQVR*
Ga0070716_10025617533300006173Corn, Switchgrass And Miscanthus RhizosphereMRFLLGFLFGASYSGNRAFRVAFLLILLFLASCLYQMSKPLGHKGRMAQPSAQVR*
Ga0066659_1062121633300006797SoilMRFLLGFLFGASYSGSRAFRVAFLLILLFLAFCAYQMSKPLGHNGRVTQPSAQVR*
Ga0066659_1090737123300006797SoilMRFLLGFLFGASYSGNRAFRVAFLLIILFFAFCAYQMSKPLAHNRRVTAPSAQVR*
Ga0099794_1055873523300007265Vadose Zone SoilMRFLLGFFSGASYTGNRVFRVAFLLLVLFMVFCLYQMSKPLGHD
Ga0099830_1086086323300009088Vadose Zone SoilVEAIRFLLGFISGAFHTGNRAFRAAFLLIILIMVFWLYQMSKPLGHNRRVASPGAEAR*
Ga0126373_1051329923300010048Tropical Forest SoilMRFLLGFIFGTFYTGSRVFRIAFLLIVLVMVFCLYQMSKPLGHHRAVTAPVAQSR*
Ga0074045_1000830673300010341Bog Forest SoilMRFLLGFLFGAYYTGNRAFRVAFLLIILFMTFCLYQMSKPLGQHRQRPAVVTQSH*
Ga0126370_1010274413300010358Tropical Forest SoilMRFLLGFFFGALSTSNRVFRIAFLLIVLVLVFCAYQMSKPLTHNNR
Ga0126376_1255528623300010359Tropical Forest SoilMKFLLGFLFGASYLGNRVVRVAFLLLLLFMVFCLYQMSKPLGHDRRVAASSAHSR*
Ga0126372_1247373923300010360Tropical Forest SoilMRFLLGFFFGALSTGHRVFRIAFLLIVLVLAFCAYQMSKPLTHNNRLTPPSAQTR*
Ga0126372_1264332823300010360Tropical Forest SoilMRFLLGFIFGAFYTGSRAFRIAFLLIVLVMAFGLYQMSKPLGHHKLVTAP
Ga0126381_10016471633300010376Tropical Forest SoilMRFLLGFIFGAFYTGSRAFRIAFLLIVLVMVLGLYQMSKPLGHHRTVTVPVTQSR*
Ga0137392_1118539523300011269Vadose Zone SoilGGGYAMRFLLGFIFGAFYTGNRAFPAAFLLIILIMVFCLYQMSKPVGHNRRVASPAAEAR
Ga0137391_1129755713300011270Vadose Zone SoilVDAIRFLLGFIFGAFHTGNRVFRVAFLLIILIMVFCLYQMSKPVGHNRRVASPAAEAR*
Ga0137364_1070474023300012198Vadose Zone SoilGEVAAMRFLLGFLFGASYSGNRVFRVAFLLILLFLAFCLYQMSKPLGHNRRVTQPSAQVR
Ga0137382_1024888723300012200Vadose Zone SoilVAAMRFLLGFLFGASYSGNRAFRIAFLLILLFLAFCLYQMSKPLGHKGRVTQPSAQVR*
Ga0137363_1057112723300012202Vadose Zone SoilMRFLLGFLFGASYSGNRAFRVAFLLILLFLAFCLYQMSKPLAHNGRVTQPSAQVR*
Ga0137363_1113989113300012202Vadose Zone SoilMRFLLGFLFGASYSGNRAFRIAFLLILLFVAFCLYQM
Ga0137399_1063070613300012203Vadose Zone SoilMRFLLGFLFGASYSGNRAFRVAFLLILLFLAFCLYQMSKPLGHKGRIAQPSAQVR*
Ga0137399_1121600233300012203Vadose Zone SoilMRFLLGFLFGASYSGNRVFRVAFLLLVLFIVFCLYQMSKPLGHNRLAGAPPAQVR
Ga0137362_1017503933300012205Vadose Zone SoilMRFLLGFLFGASYPGNRVFRVAFLLLILFMVFCLYQMSKPLGHNQDLL*
Ga0137362_1026456433300012205Vadose Zone SoilMRFLLGFLFGASYSGNRAFRVAFLLIILFFAFCAYQMSKPLGHNRRVTAPSAQVR*
Ga0137362_1168802313300012205Vadose Zone SoilMRFLLGFLFGASYSGNRVFRVAFLLIILFMVFCLYQMSKPLGHNRRVTPPSSQIR*
Ga0137376_1053540013300012208Vadose Zone SoilMRFLLGFLFGASYSGNRAFRIAFLLILLFLAFCLYQMSKPLGHKGRVTQPSAQVR*
Ga0137378_1018263733300012210Vadose Zone SoilMRFLLGFLFGASYSGNRAFRVAFLLILLFLAFCLYQMSKPLGHKGRVTQPSAQVR*
Ga0137370_1001558053300012285Vadose Zone SoilMRFLLGFIFGAFYTGNRAFRVAFLLIILFTVFCLYQMSKPLGHNRRVASPAAKAR*
Ga0137384_1088137533300012357Vadose Zone SoilMRFLLGFLFGASYSGNRAFRVAFLLILLFLAFCLYQMSKPLG
Ga0137360_1017014033300012361Vadose Zone SoilMRFLLGFLFGASYSGNRAFRVAFLLILLFLAFCLYQMSKPLRHNGRVTRPSAQVR*
Ga0137390_1202759033300012363Vadose Zone SoilMRFLLGFPFGANYIGNRVFRVAFLLLVLFMVFCLYKMSKPLGRNRRVAASSAHS
Ga0137358_1047549813300012582Vadose Zone SoilMRLLLGFLFGASYSGNRAFRVAFLLILLFLAFCLYQMSKPLGHNGRVTQPSAQVR*
Ga0137398_1003492033300012683Vadose Zone SoilMRFLLGFLFGANYIGNRVFRVAFLLLVLFMVFCLYQMSKPLGHNRRAAPPSAQVR*
Ga0137395_1005227913300012917Vadose Zone SoilFGASYSGNRAFRVAFLVIILFFAFCAYQMSKPLGHNRRVTAPSAQVR*
Ga0137395_1020302413300012917Vadose Zone SoilMRFLLGFLFGASYSGNRAFRVAFLLIVLFLAFCAYQMSKPLGHNGRVTAPSAQVR*
Ga0137396_1013266813300012918Vadose Zone SoilMRFLLGFLFGASYSGNRAFRVAFLLILLFLAFCLYQMSKPLGHDRRVTQPSAQVR*
Ga0137359_1011206313300012923Vadose Zone SoilMRFLLGFLFGASYSGNRAFRVAFLLILLFLAFCLYQMSKPLAHNGRVIQPSAQVR*
Ga0137419_1065182333300012925Vadose Zone SoilMRFLLGFLFGASYSGNRVFRVAFLLILLFLAFCLYQMSKPL
Ga0137419_1143838913300012925Vadose Zone SoilLLGFLFGASYSGNRVFRVAFLLIILFMVFCLYQMSKPLGHNRRVTAPSSQIR*
Ga0137416_1190287023300012927Vadose Zone SoilMRFLLGFLFGASYSGNRVFRVAFLLIILFMVFCLY
Ga0137405_109547813300015053Vadose Zone SoilTMRFLLGFLFGASYPGNRVFRVAFLLLILFMVFCLYQMSKPLGHNQDLL*
Ga0137420_109191633300015054Vadose Zone SoilMRFLLGFLFGANYIGNRVFRVAFLLLVLFMVFCLYQMSKPLGHDRRAAPPSAQVR*
Ga0137409_1007600223300015245Vadose Zone SoilMRFLLGFLFGASYSGNRAFRVAFLLIILFLAFCAYQMSKPLGHNSRVTAPSAQVR*
Ga0182033_1027314723300016319SoilMRFLLGFICGAFYTGSRVFRVAFLLIVLVMVFGLYQMSKPLGHHRTVTAPVTQSR
Ga0182035_1027620213300016341SoilVRFLLGFLFGAFYTGSRVFRIAFLFTILVIAFCLYQMSKPLGHNRHVTARSVETR
Ga0182035_1031715813300016341SoilMRFMLGFLFGAFYTGSRVFRITFLFIVLLMVFCLYQMSKPLAH
Ga0182032_1096483623300016357SoilMRFMLGFLFGAFYTGSRVFRITFLFIVLLMVFCLYQMSKPLAHSRRVAA
Ga0182032_1171892023300016357SoilMRFLLGYFFGALSTGNRVFRIAFLLIVLVLAFCAYQM
Ga0182034_1061024323300016371SoilMRFLLGFIFGAFYTGSRVFRIAFLLIVLVMVFGLYQMSKPLGQHRTVAAPVTQTR
Ga0182034_1081806613300016371SoilVRFLLGFLFGAFYTGSRVFRIAFLFTILVIAFCLYQMSKPIGHNRHVTARSVETR
Ga0182040_1051433923300016387SoilMRFLLGFIFGALYTESRVFRIAFLLTVLVMVFGLYQMSKPVGHHSTVSAPVTQTR
Ga0182039_1024675033300016422SoilMRFLLGFIFGAFYTGSRVFRVAFLLIVLAMVFCLYQMSKPLGHNSRLAAPVTQTP
Ga0182038_1097643013300016445SoilMRFLLGFIFGALYTESRVFRIAFLLIVLVMVFGLYQMSKPLGQHRTVAAPVTQTR
Ga0182038_1111559033300016445SoilMRFLLGFICGAFYTGSRVFRIAFLLIVLVMVFGLYQMSKPLG
Ga0187817_1040733413300017955Freshwater SedimentMRFLLGFIFGASYSGNRAFRIAFLLILLFLAFCLYQ
Ga0187778_1112266623300017961Tropical PeatlandMRFLLGFFFGALSTGNRVFRIAFLLIVLVLVFCAYQM
Ga0066667_1034556813300018433Grasslands SoilMRFLLGFLFGANCIGNRVFRVAFLVLVLFMVFCLYQMSKPL
Ga0066667_1079435413300018433Grasslands SoilMRFLLGFLFGASYSGNRAFRVAFLVILLFLAFCLYQMSKPLGHNGRVTQPSAQVR
Ga0193729_100656143300019887SoilMRFLLGFIFGAFYTGNRAFRAAFLLIILIMVFWLYQMSKPLGHNRRVASPRAEAR
Ga0179592_1000125653300020199Vadose Zone SoilMRFLLGFLFGANYIGNRVFRVAFLLLVLFMVFCLYQMSKPLGHNRRAAPPSAQVR
Ga0210407_1047417613300020579SoilMRFLLGFLFGASYSGNRAFRMAFLLILLFLAFCLYQMSKPLGHNRRATAPSAQVR
Ga0210407_1104332923300020579SoilMRFLLGFLFGAFYTGSRAFRIAFLLIVLFMVFCLYQMSKPLGHRGRVAAPVIQTP
Ga0210399_1003818433300020581SoilMRFLLGFLFGASYSGNRAFRIAFLVILLFLAFCLYQMSKPLGHNGRVAQPSAQVR
Ga0210401_1036348713300020583SoilMRFLLGFLFGASYSGNRAFRVAFLLILLFLAFCLYQMSKPLGHKGRIAQPSTQVR
Ga0210405_1025476123300021171SoilMRFLLGFLFGASYSGNRAFRVAFLLIILFFAFCAYQMSKPLGHNRRVTAPSAQVR
Ga0210408_1000805383300021178SoilMRFLLGFLFGASYSGNRAFRVAFLLILLFLAFCLYQMSKPLGHKGRIAQPSAQVR
Ga0210394_10000910303300021420SoilMRFLLGFLFGASYSGNRAFRIAFLLILLFLAFCLYQMSKPLGHNRRATAPSAQVR
Ga0210390_1001730023300021474SoilMRFLLGFLFGASYSGNRVFRVAFLLIILFMVFCLYQMSKPLGHNRRVVPPVAETH
Ga0210409_10002162133300021559SoilMRFLLGFLFGASYSGNRVFRVAFLLIILFMVFCLYQMSKPLGHNRRVTAPSSQIR
Ga0210409_1125959413300021559SoilMRFLLGFLFGAFYSGNRVFRIAFLLIILFIVFCLYQMSK
Ga0126371_1382054723300021560Tropical Forest SoilVRFLLGFLFGTFYTGSRAFRLAVLFTILVIAFCLYQMSKPLGHNRHVTARSVETR
Ga0242662_1027052313300022533SoilAMRFLLGFLFGASYSGNRAFRVAFLLILLFLAFCLYQMSKPLGHKGRVTQPSAQVR
Ga0207684_1130613713300025910Corn, Switchgrass And Miscanthus RhizosphereMRFLLGFLFGASYSGNRAFRVAFLLILLFLAFCLYQMSKPLGHNGRVTQPLAQVR
Ga0207665_1000971073300025939Corn, Switchgrass And Miscanthus RhizosphereMRFLLGFLFGASYSGNRPFRVAFLLIILFLAFCAYQMSKPLGHNGRVTQPSAQVR
Ga0179593_111698743300026555Vadose Zone SoilMRFLLGFLFGASYVGNRVFRVAFLLLILFMVFCLYQMSKPLGHNRRVAASAAHSR
Ga0209117_100673153300027645Forest SoilMRFLLGFLFGAAYIGNRVFRVAFLLLILFMVFCLYQMSKPLGHNRRVAASSWATSPG
Ga0209581_1000712133300027706Surface SoilMRFLLGFLFGASYSGNRAFRVAFLLIILFLAFCLYQMSKPLGHGGRVTPPPAQVR
Ga0209074_1025050513300027787Agricultural SoilMRFLLGFLFGASYSGNRAFRVAFLLIILFLAFCAYQMSK
Ga0209039_1041707223300027825Bog Forest SoilLGSWTGEVASMRFLLGFLFGAYYNGNRVFRITFLLIVLFMTFCLYQMSKPLGQHRPGPAVVTQGH
Ga0209006_1075870823300027908Forest SoilMRFLLGFIFGAFYTGNRAFRVAFLLIILFMVFCLYQMSKPLGHNRRVASPAAEAR
Ga0209526_1021315533300028047Forest SoilMRFLLGFLFGASYSGNRAFRVAFLLIILFLAFCAYQMSKPLGHNGRVTQPSAQAR
Ga0137415_1033948413300028536Vadose Zone SoilMRFLLGFLFGASYSGNRVFRVAFLLIILFMVFCLYQMSK
Ga0170823_1486592713300031128Forest SoilMTFWLGFLFGAYYTGNRVSRVLLLLWILFLTFCLYEISKPLGQHGQRAIGVTQTR
Ga0307474_1109985813300031718Hardwood Forest SoilMRFLLGFLFGASYSGNRAFRIAFLLILLFLAFCLYQMSKPLGHNRRVAQPSAQVR
Ga0307469_1026455413300031720Hardwood Forest SoilMRFLLGFLFGASYSGNRAFRIAFLLILLFLAFCLYQMSKPLGHNG
Ga0307475_1021169323300031754Hardwood Forest SoilMRFLLGFLFGASYSGNRAFRVAFLLILLFLAFCLYQMSKPLGHNGRVTQPSGQVR
Ga0318546_1112789323300031771SoilMRFMLGFLFGAFYTGSRVFRITFLFIVLLMVFCLYQMSKP
Ga0306919_1134913213300031879SoilMRFLLGFIFGTFYTGSRVFRIAFLLIVLVMVFCLYQMSKPLGHHRAVTAPVAQSR
Ga0306925_1011567823300031890SoilMRFMLGFLFGAFYTGSRVFRITFLFIVLLMVFCLYQMSKPLAHSRRVAAPATQAP
Ga0306925_1155119923300031890SoilMRFLLGFIFGAFYTGSRVFRVAFLLIVLAMVFCLYQMSKPLGQHRTVAAPVTQTR
Ga0318520_1099811013300031897SoilMRFLLGFIFGTFYTGSRVFRIAFLLIVLVMVFCLYQMSKPLGHHRAVTAPVAQNR
Ga0306923_1153505633300031910SoilMRFLLGFIFGAFYTGSHVFRVAFLLIVLVMVFGLYQMSK
Ga0306921_1116280533300031912SoilMRFLLGFIFGAFYTGSRVFRVAFLLIVLVMVFGLYQMSKPLGHHRTVTAPVTQSR
Ga0306921_1170034723300031912SoilMRFLLGFIFGAFYTGSRVFRVAFLLIVLAMVFCLYQMSKPLGQHRTVAAPVTQSR
Ga0310913_1066101013300031945SoilMRFMLGFLFGAFYTGSRVFRITFLFIVLLMVFCLYQMS
Ga0307479_10017059153300031962Hardwood Forest SoilMRFLLGFLFGASYSGNRAFRVAFLLIILFLAFCAYQMSKPLGHNGRVTQPSAQVR
Ga0307479_1003399863300031962Hardwood Forest SoilMRFLLGFLFGASYVGNRVFRVVFLLLILFMVFCLYQMSKPLGHNRRVHASSAHSR
Ga0307479_1103071223300031962Hardwood Forest SoilMRFLLGFLFGASYSGNRAFRVAFLLIILFFAFCAYQMSKPLGHDRRVTAPSAQVR
Ga0310911_1055444523300032035SoilMRFLLGFIFGAFYAGSRVFRIAFLLIVLVMVFCLYQMSKPLGHNS
Ga0306920_10066506533300032261SoilMRFLLGFIFGAFYAGSRVFRIAFLLIVLVMVFCLYQMSKPLGHNSRLAAPVTQTP
Ga0306920_10084843733300032261SoilFLLGFLFGAFYTGSPVFRIAFLFTILVIAFCLYQMSKPLGHNRHVTARSVETR
Ga0306920_10317315023300032261SoilMRFVLGFISGAFYTESRVFRIAFLLIVLVMVFGLYQMSKPLGHHRTVAAPVTQSR
Ga0335079_1001916783300032783SoilMRFLLGFLFGAYYTGNRAFRVSFLLIVLFMTFCLYQMSKPLGQHRSRPAVITQSQ
Ga0335081_1020382533300032892SoilMRFLLGFLFGASYSGNRAFRVAFLLITLFLAFCAYQMSKPLGHNGRVTQPSAQVR
Ga0335081_1063873523300032892SoilMRFLLGFIFGAFYTGSRVFRIAFLLIVLVMVFGLYQMSKPLGHHRTVTVPVTQTR
Ga0335072_1000310963300032898SoilMRFLLGFVFGAYYAGDRVFRITFLLIILFMTFCLYEMSKPLGHNRPKPAPVVKAQ
Ga0310914_1016779233300033289SoilMRFLLGFIFGAFYTGSHVFRVAFLLIVLVMVFGLYQMSKPVGHHSTVSAPVTQTR
Ga0310914_1188408823300033289SoilVRFLLGFIFGAFYTGSRVFRIAFLLIVLLMVFCLYQMSKPLAHSRRVAAP

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.