NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F077951

Metagenome / Metatranscriptome Family F077951

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F077951
Family Type Metagenome / Metatranscriptome
Number of Sequences 117
Average Sequence Length 74 residues
Representative Sequence MRWLLKDVIVVGTALFVVGTWMTSHHSHKVVTQEHPEHKVRDFLIYTCVGIALITVGSNMMTDGLVSRLKGE
Number of Associated Samples 102
Number of Associated Scaffolds 117

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Archaea
% of genes with valid RBS motifs 67.52 %
% of genes near scaffold ends (potentially truncated) 29.91 %
% of genes from short scaffolds (< 2000 bps) 64.10 %
Associated GOLD sequencing projects 95
AlphaFold2 3D model prediction Yes
3D model pTM-score0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Archaea (52.991 % of family members)
NCBI Taxonomy ID 2157
Taxonomy All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(31.624 % of family members)
Environment Ontology (ENVO) Unclassified
(70.940 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(79.487 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 62.00%    β-sheet: 0.00%    Coil/Unstructured: 38.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.59
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 117 Family Scaffolds
PF02037SAP 19.66
PF00535Glycos_transf_2 11.11
PF00004AAA 5.98
PF13307Helicase_C_2 5.13
PF04230PS_pyruv_trans 4.27
PF05406WGR 2.56
PF01521Fe-S_biosyn 1.71
PF14743DNA_ligase_OB_2 1.71
PF08271TF_Zn_Ribbon 1.71
PF02511Thy1 0.85
PF03833PolC_DP2 0.85
PF00493MCM 0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 117 Family Scaffolds
COG3831WGR domain, predicted DNA-binding domain in MolRTranscription [K] 2.56
COG0316Fe-S cluster assembly iron-binding protein IscAPosttranslational modification, protein turnover, chaperones [O] 1.71
COG4841Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF familyFunction unknown [S] 1.71
COG1241DNA replicative helicase MCM subunit Mcm2, Cdc46/Mcm familyReplication, recombination and repair [L] 0.85
COG1351Thymidylate synthase ThyX, FAD-dependent familyNucleotide transport and metabolism [F] 0.85

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms73.50 %
UnclassifiedrootN/A26.50 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000117|DelMOWin2010_c10002267All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon12182Open in IMG/M
3300000325|SI39nov09_100mDRAFT_1014351All Organisms → Viruses → Predicted Viral1935Open in IMG/M
3300000947|BBAY92_10164996All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon580Open in IMG/M
3300001450|JGI24006J15134_10001574All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon12949Open in IMG/M
3300001683|GBIDBA_10000739Not Available88317Open in IMG/M
3300001965|GOS2243_1027470All Organisms → Viruses → Predicted Viral1588Open in IMG/M
3300001966|GOS2245_1022681All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon955Open in IMG/M
3300002231|KVRMV2_100072518Not Available1737Open in IMG/M
3300002242|KVWGV2_10028669Not Available1522Open in IMG/M
3300002488|JGI25128J35275_1000090Not Available26325Open in IMG/M
3300002488|JGI25128J35275_1010476All Organisms → Viruses → Predicted Viral2417Open in IMG/M
3300003478|JGI26238J51125_1000092All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon31123Open in IMG/M
3300003478|JGI26238J51125_1001247All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon9128Open in IMG/M
3300003495|JGI26244J51143_1001921All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon6696Open in IMG/M
3300003601|JGI26382J51730_1056350All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon838Open in IMG/M
3300004097|Ga0055584_100785783All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon996Open in IMG/M
3300005400|Ga0066867_10164564Not Available822Open in IMG/M
3300005404|Ga0066856_10477380All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon531Open in IMG/M
3300005427|Ga0066851_10175857Not Available678Open in IMG/M
3300005735|Ga0076923_101718All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon6442Open in IMG/M
3300005837|Ga0078893_10449452All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon8087Open in IMG/M
3300005837|Ga0078893_11203492Not Available966Open in IMG/M
3300005837|Ga0078893_11914866Not Available1049Open in IMG/M
3300006737|Ga0098037_1076920All Organisms → Viruses → Predicted Viral1175Open in IMG/M
3300006750|Ga0098058_1020555All Organisms → Viruses → Predicted Viral1940Open in IMG/M
3300006750|Ga0098058_1177189All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon558Open in IMG/M
3300006752|Ga0098048_1112638All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon819Open in IMG/M
3300006753|Ga0098039_1283717Not Available554Open in IMG/M
3300006754|Ga0098044_1297856All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon617Open in IMG/M
3300006900|Ga0066376_10412972All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon771Open in IMG/M
3300006921|Ga0098060_1031851All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1602Open in IMG/M
3300006921|Ga0098060_1060097All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1111Open in IMG/M
3300006922|Ga0098045_1124705All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon600Open in IMG/M
3300006990|Ga0098046_1087836All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon696Open in IMG/M
3300007972|Ga0105745_1020722All Organisms → Viruses → Predicted Viral1644Open in IMG/M
3300008470|Ga0115371_10793094Not Available3301Open in IMG/M
3300009110|Ga0117925_1018025All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon3504Open in IMG/M
3300009172|Ga0114995_10009538All Organisms → cellular organisms → Bacteria6106Open in IMG/M
3300009173|Ga0114996_10007744All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon12094Open in IMG/M
3300009420|Ga0114994_10479010Not Available821Open in IMG/M
3300009420|Ga0114994_10988779All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon544Open in IMG/M
3300009433|Ga0115545_1000504Not Available21153Open in IMG/M
3300009488|Ga0114925_10470801Not Available877Open in IMG/M
3300009488|Ga0114925_10519757Not Available836Open in IMG/M
3300009550|Ga0115013_10981082All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon599Open in IMG/M
3300009608|Ga0115100_10198341All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon507Open in IMG/M
3300009785|Ga0115001_10073903All Organisms → Viruses → Predicted Viral2238Open in IMG/M
3300014903|Ga0164321_10020736All Organisms → Viruses → Predicted Viral2193Open in IMG/M
3300016762|Ga0182084_1170084All Organisms → Viruses → Predicted Viral1435Open in IMG/M
3300017728|Ga0181419_1167430All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon522Open in IMG/M
3300017744|Ga0181397_1002650All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon6202Open in IMG/M
3300017782|Ga0181380_1151838All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon788Open in IMG/M
3300017952|Ga0181583_10033270All Organisms → Viruses → Predicted Viral3712Open in IMG/M
3300017956|Ga0181580_10003235All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon13252Open in IMG/M
3300017958|Ga0181582_10001594All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon17855Open in IMG/M
3300017967|Ga0181590_10014329All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon6446Open in IMG/M
3300019047|Ga0193549_10002335All Organisms → Viruses → Predicted Viral1906Open in IMG/M
3300019277|Ga0182081_1333061All Organisms → Viruses → Predicted Viral1823Open in IMG/M
3300020165|Ga0206125_10092674All Organisms → Viruses → Predicted Viral1300Open in IMG/M
3300020274|Ga0211658_1106165All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon550Open in IMG/M
3300020377|Ga0211647_10052082All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1500Open in IMG/M
3300020403|Ga0211532_10002039All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon15225Open in IMG/M
3300020416|Ga0211644_10069055All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1430Open in IMG/M
3300020417|Ga0211528_10360801All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon538Open in IMG/M
3300020428|Ga0211521_10053033All Organisms → cellular organisms → Bacteria2087Open in IMG/M
3300020438|Ga0211576_10000969All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon22854Open in IMG/M
3300020442|Ga0211559_10020775All Organisms → Viruses → Predicted Viral3313Open in IMG/M
3300020442|Ga0211559_10062671Not Available1816Open in IMG/M
3300020446|Ga0211574_10000581Not Available20008Open in IMG/M
3300020447|Ga0211691_10070281All Organisms → Viruses → Predicted Viral1263Open in IMG/M
3300020451|Ga0211473_10037646Not Available2409Open in IMG/M
3300020451|Ga0211473_10713986All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon501Open in IMG/M
3300020454|Ga0211548_10396298All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon675Open in IMG/M
3300020478|Ga0211503_10001797Not Available18325Open in IMG/M
3300021169|Ga0206687_1370778All Organisms → Viruses → Predicted Viral1108Open in IMG/M
3300021169|Ga0206687_1892420Not Available972Open in IMG/M
3300021185|Ga0206682_10001081All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon27296Open in IMG/M
3300021375|Ga0213869_10004010All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon9631Open in IMG/M
3300021959|Ga0222716_10496012All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon688Open in IMG/M
(restricted) 3300024261|Ga0233439_10010168All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon7434Open in IMG/M
3300024432|Ga0209977_10064619All Organisms → Viruses → Predicted Viral1782Open in IMG/M
3300024432|Ga0209977_10219151All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon926Open in IMG/M
3300025072|Ga0208920_1066306All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon700Open in IMG/M
3300025098|Ga0208434_1057681Not Available834Open in IMG/M
3300025099|Ga0208669_1113314All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon555Open in IMG/M
3300025112|Ga0209349_1004519All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon6140Open in IMG/M
3300025127|Ga0209348_1039478Not Available1644Open in IMG/M
3300025128|Ga0208919_1234276All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon538Open in IMG/M
3300025138|Ga0209634_1163509Not Available892Open in IMG/M
3300025168|Ga0209337_1052469Not Available2108Open in IMG/M
3300025816|Ga0209193_1000170Not Available47968Open in IMG/M
3300025853|Ga0208645_1150463All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon886Open in IMG/M
3300026448|Ga0247594_1034303Not Available860Open in IMG/M
3300026461|Ga0247600_1047323All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon837Open in IMG/M
3300026465|Ga0247588_1063993All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon727Open in IMG/M
3300027779|Ga0209709_10015490Not Available5200Open in IMG/M
3300027813|Ga0209090_10228279Not Available949Open in IMG/M
3300027838|Ga0209089_10018803All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon4920Open in IMG/M
3300027847|Ga0209402_10471218All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon739Open in IMG/M
(restricted) 3300028045|Ga0233414_10074894All Organisms → Viruses → Predicted Viral1430Open in IMG/M
3300028132|Ga0228649_1087680All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon787Open in IMG/M
3300028137|Ga0256412_1123149All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon951Open in IMG/M
3300028173|Ga0257118_1082560All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon737Open in IMG/M
3300028177|Ga0257122_1047881All Organisms → Viruses → Predicted Viral1391Open in IMG/M
3300028194|Ga0257106_1000031Not Available75404Open in IMG/M
3300031519|Ga0307488_10147957Not Available1649Open in IMG/M
3300031556|Ga0308142_1019344Not Available987Open in IMG/M
3300031601|Ga0307992_1216440All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon703Open in IMG/M
3300031601|Ga0307992_1298495All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon561Open in IMG/M
3300031629|Ga0307985_10145806Not Available941Open in IMG/M
3300031629|Ga0307985_10235912All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon719Open in IMG/M
3300031774|Ga0315331_10005891All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon9185Open in IMG/M
3300031774|Ga0315331_10011164All Organisms → cellular organisms → Bacteria6684Open in IMG/M
3300031801|Ga0310121_10041631All Organisms → Viruses → Predicted Viral3142Open in IMG/M
3300031803|Ga0310120_10226231All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1014Open in IMG/M
3300032011|Ga0315316_10007912All Organisms → cellular organisms → Bacteria7909Open in IMG/M
3300034375|Ga0348336_172114All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon615Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine31.62%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine14.53%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater5.13%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine5.13%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh5.13%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine4.27%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface3.42%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater3.42%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine2.56%
Marine Surface WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water2.56%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater2.56%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater1.71%
MarineEnvironmental → Aquatic → Marine → Inlet → Unclassified → Marine1.71%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater1.71%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous1.71%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine1.71%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment1.71%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.85%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine0.85%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water0.85%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.85%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater0.85%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine0.85%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine0.85%
Hydrothermal Vent PlumeEnvironmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume0.85%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment0.85%
SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment0.85%
Macroalgal SurfaceHost-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface0.85%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300000325Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 39 11/10/09 100mEnvironmentalOpen in IMG/M
3300000947Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY92Host-AssociatedOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001683Hydrothermal vent plume microbial communities from Guaymas Basin, Gulf of California - IDBA assemblyEnvironmentalOpen in IMG/M
3300001965Marine microbial communities from Coastal Floreana, Equador - GS028EnvironmentalOpen in IMG/M
3300001966Marine microbial communities from Roca Redonda, Equador - GS030EnvironmentalOpen in IMG/M
3300002231Marine sediment microbial communities from Santorini caldera mats, Greece - red matEnvironmentalOpen in IMG/M
3300002242Marine sediment microbial communities from Kolumbo Volcano mats, Greece - white/grey matEnvironmentalOpen in IMG/M
3300002488Marine viral communities from the Pacific Ocean - ETNP_2_60EnvironmentalOpen in IMG/M
3300003478Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_100m_DNAEnvironmentalOpen in IMG/M
3300003495Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_150m_DNAEnvironmentalOpen in IMG/M
3300003601Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI074_LV_165m_DNAEnvironmentalOpen in IMG/M
3300004097Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaGEnvironmentalOpen in IMG/M
3300005400Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV261EnvironmentalOpen in IMG/M
3300005404Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV205EnvironmentalOpen in IMG/M
3300005427Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65EnvironmentalOpen in IMG/M
3300005735Seawater microbial communities from Vineyard Sound, MA, USA - control T0EnvironmentalOpen in IMG/M
3300005837Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18EnvironmentalOpen in IMG/M
3300006737Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaGEnvironmentalOpen in IMG/M
3300006750Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaGEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006753Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaGEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006900Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_AEnvironmentalOpen in IMG/M
3300006921Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaGEnvironmentalOpen in IMG/M
3300006922Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaGEnvironmentalOpen in IMG/M
3300006990Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaGEnvironmentalOpen in IMG/M
3300007972Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460ABC_3.0umEnvironmentalOpen in IMG/M
3300008470Sediment core microbial communities from Adelie Basin, Antarctica. Combined Assembly of Gp0136540, Gp0136562, Gp0136563EnvironmentalOpen in IMG/M
3300009110Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 198m, 2.7-0.2um, replicate bEnvironmentalOpen in IMG/M
3300009172Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154EnvironmentalOpen in IMG/M
3300009173Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134EnvironmentalOpen in IMG/M
3300009420Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152EnvironmentalOpen in IMG/M
3300009433Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330EnvironmentalOpen in IMG/M
3300009488Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00607 metaGEnvironmentalOpen in IMG/M
3300009550Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 MetagenomeEnvironmentalOpen in IMG/M
3300009608Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_2Apr14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009785Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130EnvironmentalOpen in IMG/M
3300014903Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay12, Core 4567-28, 21-24 cmEnvironmentalOpen in IMG/M
3300016762Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071413CT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017728Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24EnvironmentalOpen in IMG/M
3300017744Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23EnvironmentalOpen in IMG/M
3300017782Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19EnvironmentalOpen in IMG/M
3300017952Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017956Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017958Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017967Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019047Metatranscriptome of marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001564 (ERX1399746-ERR1328125)EnvironmentalOpen in IMG/M
3300019277Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071412AT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020165Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1EnvironmentalOpen in IMG/M
3300020274Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX556029-ERR598943)EnvironmentalOpen in IMG/M
3300020377Marine microbial communities from Tara Oceans - TARA_B100000927 (ERX556007-ERR599065)EnvironmentalOpen in IMG/M
3300020403Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145)EnvironmentalOpen in IMG/M
3300020416Marine microbial communities from Tara Oceans - TARA_B100001109 (ERX556137-ERR599039)EnvironmentalOpen in IMG/M
3300020417Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556034-ERR599082)EnvironmentalOpen in IMG/M
3300020428Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)EnvironmentalOpen in IMG/M
3300020438Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)EnvironmentalOpen in IMG/M
3300020442Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)EnvironmentalOpen in IMG/M
3300020446Marine microbial communities from Tara Oceans - TARA_B100001287 (ERX556031-ERR598989)EnvironmentalOpen in IMG/M
3300020447Marine microbial communities from Tara Oceans - TARA_B100000745 (ERX556090-ERR599159)EnvironmentalOpen in IMG/M
3300020451Marine microbial communities from Tara Oceans - TARA_B100001778 (ERX555927-ERR598996)EnvironmentalOpen in IMG/M
3300020454Marine microbial communities from Tara Oceans - TARA_B100001769 (ERX556037-ERR599170)EnvironmentalOpen in IMG/M
3300020478Marine microbial communities from Tara Oceans - TARA_B100000029 (ERX556025-ERR599111)EnvironmentalOpen in IMG/M
3300021169Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021185Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015EnvironmentalOpen in IMG/M
3300021375Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132EnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300024261 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_100_MGEnvironmentalOpen in IMG/M
3300024432Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00607 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025072Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025098Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025099Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025112Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)EnvironmentalOpen in IMG/M
3300025127Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025816Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330 (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300026448Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 57R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300026461Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 75R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300026465Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 48R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300027779Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)EnvironmentalOpen in IMG/M
3300027813Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes)EnvironmentalOpen in IMG/M
3300027838Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)EnvironmentalOpen in IMG/M
3300027847Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126 (SPAdes)EnvironmentalOpen in IMG/M
3300028045 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_10_MGEnvironmentalOpen in IMG/M
3300028132Seawater microbial communities from Monterey Bay, California, United States - 61DEnvironmentalOpen in IMG/M
3300028137Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - WCR_74 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028173Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_150mEnvironmentalOpen in IMG/M
3300028177Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI106_120EnvironmentalOpen in IMG/M
3300028194Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_10mEnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031556Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB9_538_SCM (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031601Marine microbial communities from Ellis Fjord, Antarctic Ocean - #133EnvironmentalOpen in IMG/M
3300031629Marine microbial communities from Ellis Fjord, Antarctic Ocean - #80EnvironmentalOpen in IMG/M
3300031774Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915EnvironmentalOpen in IMG/M
3300031801Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986EnvironmentalOpen in IMG/M
3300031803Marine microbial communities from Western Arctic Ocean, Canada - CB27_AW_983EnvironmentalOpen in IMG/M
3300032011Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416EnvironmentalOpen in IMG/M
3300034375Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOWin2010_10002267103300000117MarineMTDVIVIGSALFLIGTWLSSHHTHKVVTQEHPEHRVRQFLIYTCIGVCLMTVGSNMMTDGVVERLKGSGEA*
SI39nov09_100mDRAFT_101435113300000325MarineVFTMRMGTLMTDVVVIGSALFLIGTWLSSHHTHKVVTQKHPEHRVRQFLIYTCIGVCFMTVGSNMMTDGVVERLKGSGEA*
BBAY92_1016499623300000947Macroalgal SurfaceMRWLLRDVIVVGTALFVVGTWMTSHHSHKVVTQEHPEHKVRDFLIYTCVGIALITVGSNMMTDGFVSKLRGD*
JGI24006J15134_10001574123300001450MarineVDTKTLLTDVLIVGTVLFVVGTWITSHHSHKIVTQDHPEHRVRDFLIYTCAGIALITVGSNMITDSMISRLGGN*
GBIDBA_1000073963300001683Hydrothermal Vent PlumeVIKHLLTDIIIVGTALFVVGTWMTSHHTHKVVTGDHPEHKVREFLIYTCVGLALITVGSNMMTDGFIHRLSGDEA*
GOS2243_102747013300001965MarineMTDVIVIGSALFLIGTWLSSHHTHKIVTQEHPEHRVRQFLIYTCIGVCLMTVGSNMMTDGVVERLKGSGEA*
GOS2245_102268133300001966MarineMRWLLRDVIVVGTALFVVGTWMTSHHSHKVITQEHPEHRVRDFLIYTCVGIALITVGSNMMTDGLVSRLKGE*
KVRMV2_10007251833300002231Marine SedimentMKWLMTDIIVVGTGLFLLGTWISSHHSHAVVTGDHPDHKVREFLIYTCMGVALITVGSNMMTDGLISRLKGE*
KVWGV2_1002866913300002242Marine SedimentRMRKKMVSNLLTDIIIVGTAMFLVGTWLSSHHSHKIREFLIYTCLGIALITVGSNMMTDGLISRLKGGA*
JGI25128J35275_1000090133300002488MarineMKPQPDVRSKGVDVMRRLLKDVIVVGTALFVLGTWMTSHHSHKVITQEHPEHKVRDFLIYTCVGIALITVGSNMMTDGFVSRLRGD*
JGI25128J35275_101047623300002488MarineMKALLTDIVVVGTVMFLVGTWLSSHHSHKMITDDHPEHKVREFLIYTCIGIALITVGSNMMTDGLIEKLTTKAKD*
JGI26238J51125_1000092123300003478MarineMRMGTLMTDVVVIGSALFLIGTWLSSHHTHKVVTQKHPEHRVRQFLIYTCIGVCFMTVGSNMMTDGVVERLKGSGEA*
JGI26238J51125_100124783300003478MarineVDTKTLLTDVLIVGTVLFVVGTWITSHHSHKIVTQDHPEHRVRDFLIYTCAGIALITVGSNMITDGMISRLGGN*
JGI26244J51143_1001921103300003495MarineMGTLMTDVVVIGSALFLIGTWLSSHHTHKVVTQKHPEHRVRQFLIYTCIGVCFMTVGSNMMTDGVVERLKGSGEA*
JGI26382J51730_105635043300003601MarineTLLTDVLIVGTVLFVVGTWITSHHSHKIVTQDHPEHRVRDFLIYTCAGIALITVGSNMITDGMISRLGGN*
Ga0055584_10078578323300004097Pelagic MarineMKLGTLMTDVVVIGSALFLIGTWLSSHHTHKVITQKHPEHRVRQFLIYTCIGVCLMTVGSNMMTDGVVERLKGSGEA*
Ga0066867_1016456413300005400MarineVIKHLLTDIIVVGTVLFVVGTWLSSHHTHKIVTNGHPDHKVREFLIYTCIGVALITVGSNMIT
Ga0066856_1047738023300005404MarineLKDVIVVGTALFVLGTWMTSHHSHKVITQEHPEHKVRDFLIYTCVGIALITVGSNMMTDGFVSRLRGD*
Ga0066851_1017585713300005427MarineVIKHLLTDIIVVGTVLFVVGTWLSSHHTHKIVTNGHPDHKVREFLIYTCIGVALITVGSNMITDGFIHRLSGDDL*
Ga0076923_10171833300005735MarineMRIGSLMTDVIVIGSALFLIGTWLSSHHTHKVVTQEHPEHRVRQFLIYTCIGVCLMTVGSNMMTDGVVERLKGSGEA*
Ga0078893_1044945243300005837Marine Surface WaterMKPQPDVRSKGVDVMRRLLKDVIVVGTALFVLGTWMTSHHSHKIVTQEHPDHKVRDFLIYTCVGIALITVGSNMMTDGFVSKLRGD*
Ga0078893_1120349233300005837Marine Surface WaterMIRNLMTDIIVVGTAMFLIGTWLSTHHSHKMITQEHPEHKVRNFLIYTCLGIAFITVGSNMMTDGLISRLQGKA*
Ga0078893_1191486623300005837Marine Surface WaterMRWLLRDVIVVGTALFVVGTWMTSHHSHKVVTQEHPEHKVRDFLIYTCVGIALITVGSNMMTDGLISRLKGE*
Ga0098037_107692033300006737MarineMIRNLMTDIIVVGTAMFLVGTLLSTHHSHKMITQDHPEHKVRNFLIYTCIGIALITVGSNMMTDGLISRLKGEA*
Ga0098058_102055523300006750MarineMRMGTLMTDVVVIGSALFLIGTWLSSHHTHKVVTQEHPEHRVRQFLIYTCIGVCLMTVGSNMMTDGVVERLKGSGDA*
Ga0098058_117718923300006750MarineDSVIKRLLTDIIIVGTALFVVGTWMTSHHTHKVVTGDHPEHKVREFLIYTCIGVALITVGSNMITDGFIHRLSGDDL*
Ga0098048_111263823300006752MarineMKPQPDVRSKGVDVMRRLLKDVIVVGTALFVLGTWMTSHHSHKIVTQEHPDHKVRDFLIYTCVGIALITVGSNMMTDGFVSRLRGD*
Ga0098039_128371713300006753MarineVIKRLLTDIIIVGTALFVVGTWMTSHHTHKVVTGDHPEHKVREFLIYTCIGVALITVGSNMITDGF
Ga0098044_129785623300006754MarineVIKRLLTDIIIVGTALFVVGTWMTSHHTHKVVTGDHPEHKVREFLIYTCIGVALITVGSNMITDGFIHRLSGDDL*
Ga0066376_1041297213300006900MarineVGTALFVVGTWMTSHHTHKVVTGNHPEHKVREFLIYTCIGVALITMGSNMMTDGFIHRLRGD*
Ga0098060_103185123300006921MarineMKWLMTDILVVGTGLFLIGTWISSHHSHAVVTGDHPDHKVREFLIYTCVGVALITVGSNMMTDGLISRLKGE*
Ga0098060_106009733300006921MarineLMTDVVVIGSALFLIGTWLSSHHTHKVVTQEHPEHRVRQFLIYTCIGVCLMTVGSNMMTDGVVERLKGSGDA*
Ga0098045_112470513300006922MarineIVVGTALFVLGTWMTSHHSHKVITQEHPEHKVRDFLIYTCVGIALITVGSNMMTDGFVSRLRGD*
Ga0098046_108783623300006990MarineMRMGTLMTDVVVIGSALFLIGTWLSSHHTHKVVTQEHPEHRVRQFLIYTCIGVCLMTVGSNMMTDGVVERLKGS
Ga0105745_102072233300007972Estuary WaterMRMGTLMTDVVVIGSALFLIGTWLSSHHTHKVVTQKHPEYRVRQFLIYTCIGVCFMTVGSNMMTDGVVERLKGSGEA*
Ga0115371_1079309453300008470SedimentVNTKTILTDVIIVGTVLFVIGTWVTTHHSHKVITQDHPEHRVRDFLIYTCGGIALITVGSNMITDGLMSRLKGE*
Ga0117925_101802523300009110MarineVIKHLLTDIIVVGTVLFVAGTWLSSHHTHKIVTNGHPDHKVREFLIYTCIGVALITVGSNMITDGFIHRLSGDDL*
Ga0114995_1000953853300009172MarineVNTKTLLTDTIIVGTVLFVVGTWITSHHSHKVITQDHPEHKVRDFLIYTCGGIALITIGSNMITDGFMSRLGGN*
Ga0114996_1000774473300009173MarineVIKHLLTDIIIVGTALFVVGTWMTSHHTHKVVTGDHPEHKVREFLIYTCVGVALITMGSNMMTDGFIHRLSGDVA*
Ga0114994_1047901023300009420MarineMVKHLLTDIIIVGTAMFLIGTWLSSHHSHKMITGNHPEHKVREFLIYTCVGIALITVGSNMMTDGLISRLKRNA*
Ga0114994_1098877913300009420MarineMIKHLLTDIIIVGTAMFLIGTWLSSHHSHKIITGNHPEHKVREFLIYTCVGIALITVGSNMMTDG
Ga0115545_1000504243300009433Pelagic MarineMIRNLMTDIIVVGTAMFLIGTWLSTHHSHKMITQEHPEHKVRNFLIYTCIGIAFITVGSNMMTDGLISRLQGKA*
Ga0114925_1047080113300009488Deep SubsurfaceMRWLLKDVIVVGTALFVVGTWMTSHHSHKVVTQEHPEHKVRDFLIYTCVGIALITVGSNMMTDGLVSRLKGE*
Ga0114925_1051975723300009488Deep SubsurfaceMKQLLTDVIVVGTALFLLGTWLSSHHTHKVVTDDHPEHKVREFLIYTCVGVALITVGSNMMTDGLIDRLKGVKA*
Ga0115013_1098108223300009550MarineMKPQPDVRSKGVDVMRRLLKDVIVVGTALFVLGTWMTSHHSHKIVTQEHPEHKVRDFLIYTCVGIALITVGSNMMTDGFVSRLRGD*
Ga0115100_1019834113300009608MarineMRIGSLMTDVIVIGSALFLIGTWLSSHHTHKVITQKHPEHRVRQFLIYTCIGVCLMTVGSNMMTDGVVERLKGSGEA*
Ga0115001_1007390313300009785MarineVNTKTLLTDTIIVGTVLFVVGTWITSHHSHKVITQDHPEHKVRDFLIYTCGGIALITIGSNMITDGFM
Ga0164321_1002073633300014903Marine SedimentMKTLLTDIVVVGTVMFLVGTWLSSHHSHKIITDEHPEHKVREFLIYTCIGIALITVGSNMMTDGIIEKLTVKAKD*
Ga0182084_117008413300016762Salt MarshMTDVVVIGSALFLIGTWLSSHHTHKVVTQEHPEHKVREFLIYTCVGVALITVGSNMMTDGLIERLKGVG
Ga0181419_116743023300017728SeawaterMTDVIVIGSALFLIGTWLSSHHTHKVITQKHPEHRVRQFLIYTCIGVCLMTVGSNMMTDGVVERLKGS
Ga0181397_100265013300017744SeawaterEDVFTMRMGTLMTDVVVIGSALFLIGTWLSSHHTHKVVTQKHPEHRVRQFLIYTCIGVCFMTVGSNMMTDGVVERLKGSGEA
Ga0181380_115183833300017782SeawaterRIGSLMTDVIVIGSALFLIGTWLSSHHTHKVITQKHPEHRVRQFLIYTCIGVCLMTVGSNMMTDGVVERLKGSGEA
Ga0181583_1003327043300017952Salt MarshMGTLMTDVVVIGSALFLIGTWLSSHHTHKVVTQEHPEHKVREFLIYTCVGVALITVGSNMMTDGLIERLKGAGEA
Ga0181580_10003235113300017956Salt MarshMRMGTLMTDVVVIGSALFLIGTWLSSHHTHKVVTQEHPEHKVREFLIYTCVGVALITVGSNMMTDGLIERLKGVGEA
Ga0181582_10001594163300017958Salt MarshMRMGTLMTDVVVIGSALFLIGTWLSSHHTHKVVTQEHPEHKVREFLIYTCFGVALITVGSNMMTDGLIERLKGAGEA
Ga0181590_1001432913300017967Salt MarshMRMGTLMTDVVVIGSALFLIGTWLSSHHTHKVVTQEHPEHKVREFLIYTCVGVALITVGSNMMTDGLIERLKGAGEA
Ga0193549_1000233533300019047MarineMKPQPDVRSKGVDVMRRLLKDVIVVGTALFVLGTWMTSHHSHKIVTQEHPDHKVRDFLIYTCVGIALITVGSNMMTDGFVSRLRGD
Ga0182081_133306123300019277Salt MarshMGTLMTDVVVIGSALFLIGTWLSSHHTHKVVTQEHPEHKVREFLIYTCVGVALITVGSNMMTDGLIERLKGVGEA
Ga0206125_1009267413300020165SeawaterMKLGTLMTDVVVIGSALFLIGTWLSSHHTHKVITQKHPEHRVRQFLIYTCIGVCLMTVGSNMMTDGVVERLKGSGEA
Ga0211658_110616513300020274MarineMKPQPDVRSKGVDVMRRLLKDVIVVGTALFVLGTWMTSHHSHKVITQEHPEHKVRDFLIYTCVGIALITVGSNMMTDGFVSRLRGD
Ga0211647_1005208213300020377MarineMRWLLRDVIVVGTALFVVGTWMTSHHSHKVVTQEHPEHKVRDFLIYTCVGIALITVGSNMMTDGLVSRLKGE
Ga0211532_10002039143300020403MarineMRWLLRDVIVVGTALFVVGTWMTSHHSHKVVTQEHPEHKVRDFLIYTCVGIALITVGSNMMTDGFVSRLKGE
Ga0211644_1006905513300020416MarineVDVMRWLLRDVIVVGTALFVVGTWMTSHHSHKVVTQEHPEHKVRDFLIYTCVGIALITVGSNMMTDGLVSRLKGE
Ga0211528_1036080113300020417MarineMRWLLRDVIVVGTAFFVVGTWMTSHHSHKVVTQEHPEHKVRDFLIYTCVGIALITVGSNMMTDGFVSRLKGE
Ga0211521_1005303333300020428MarineMKWLMTDIIVVGTGLFLLGTWISSHHSHAVVTGDHPDHKVREFLIYTCMGVALITVGSNMMTDGLISRLKGE
Ga0211576_1000096973300020438MarineMRMGTLMTDVVVIGSALFLIGTWLSSHHTHKVVTQKHPEHRVRQFLIYTCIGVCFMTVGSNMMTDGVVERLKGSGEA
Ga0211559_1002077563300020442MarineMRWLLRDVIVVGTALFVVGTWMTSHHSHKVITQEHPEHRVRDFLIYTCVGIALITVGSNMMTDGLVSRLKGE
Ga0211559_1006267123300020442MarineMKALLTDIVVVGTVMFLVGTWLSSHHSHKMITDDHPEHKIREFLIYTCIGIALITVGSNMMTDGLIEKLTVKAKD
Ga0211574_10000581253300020446MarineMKALLTDIVVVGTVMFLVGTWLSSHHSHKMITDDHPEHKIREFLIYTCIGIALITVGSNMMTDGIIDKLTVKAKD
Ga0211691_1007028123300020447MarineVIKHLLTDIIVVGTALFVVGTLMTSHHTHKVVTGDHPEHKVREFLIYTCIGLALITVGSNMMTDGFIHRLSGDDL
Ga0211473_1003764653300020451MarineMVSNLLTDIIIVGTAMFLVGTWLSSHHSHKIITNDHPEHKIREFLIYTCLGIALITVGSNMMTDGLISRLKGDA
Ga0211473_1071398623300020451MarineMIRNLMTDIIVVGTAMFLVGTWLSTHHSHKMITQDHPEHKVRNFLIYTCIGIALITVGSNMMTDG
Ga0211548_1039629813300020454MarineMIRNLMTDIIVVGTAMFLVGTWLSTHHSHKMITQDHPEHKVRNFLIYTCIGIALITVGSNMMTDGLISRLKGEA
Ga0211503_10001797173300020478MarineMKHLLTDVIVVGTALFLLGTWLSSHHTHKVVTDDHPEHKVREFLIYTCVGVALITVGSNMMTDGLIDRLKGVKA
Ga0206687_137077833300021169SeawaterMRMGTLMTDVVVIGSALFLIGTWLSSHHTHKVVTQKHPEHRVRQFLIYTCVGVCLMTVGSNMMTDGVVERLKGSGEA
Ga0206687_189242023300021169SeawaterVDTKTLLTDVLIVGTVLFVVGTWITSHHSHKIVTQDHPEHRVRDFLIYTCAGIALITVGSNMITDGMISRLGGN
Ga0206682_1000108123300021185SeawaterMRIGSLMTDVIVIGSALFLIGTWLSSHHTHKVITQKHPEHRVRQFLIYTCIGVCLMTVGSNMMTDGVVERLKGSGEA
Ga0213869_1000401083300021375SeawaterMRIGSLMTDVIVIGSALFLIGTWLSSHHTHKVVTQEHPEHRVRQFLIYTCIGVCLMTVGSNMMTDGVVERLKGSGEA
Ga0222716_1049601223300021959Estuarine WaterMRMGTLMTDVVVIGSALFLIGTWLSSHHTHKVVTQKHPEHKVREFLIYTCVGVALITVGSNMMTDGLIERLKGAGEA
(restricted) Ga0233439_1001016843300024261SeawaterVNTKTLLTDTIIVGTVLFVVGTWITSHHSHKVITQDHPEHKVRDFLIYTCGGIALITIGSNMITDGFMSRLGGN
Ga0209977_1006461923300024432Deep SubsurfaceMRWLLKDVIVVGTALFVVGTWMTSHHSHKVVTQEHPEHKVRDFLIYTCVGIALITVGSNMMTDGLVSRLKGE
Ga0209977_1021915123300024432Deep SubsurfaceMKHLLTDVIVVGTALFLLGTWLSSHHTHKVVTDDHPEHKVREFLIYTCVGLALITVGSNMMTDGFIARLKGE
Ga0208920_106630613300025072MarineMIRNLMTDIIVVGTAMFLVGTLLSTHHSHKMITQDHPEHKVRNFLIYTCIGIALITVGSNMMTDGLISRLKGEA
Ga0208434_105768113300025098MarineMIRNLMTDIIVVGTAMFLVGTLLSTHHSHKMITQDHPEHKVRNFLIYTCIGIALITVGSNMMTD
Ga0208669_111331413300025099MarineMTDVVVIGSALFLIGTWLSSHHTHKVVTQEHPEHRVRQFLIYTCIGVCLMTVGSNMMTDGVVERLKGSGDA
Ga0209349_100451953300025112MarineVIKHLLTDIIVVGTVLFVVGTWLSSHHTHKIVTNGHPDHKVREFLIYTCIGVALITVGSNMITDGFIHRLSGDDL
Ga0209348_103947833300025127MarineMKALLTDIVVVGTVMFLVGTWLSSHHSHKMITDDHPEHKVREFLIYTCIGIALITVGSNMMTDGLIEKLTTKAKD
Ga0208919_123427623300025128MarineMKWLMTDILVVGTGLFLIGTWISSHHSHAVVTGDHPDHKVREFLIYTCVGVALITVGSNMMTDGLISRLKGE
Ga0209634_116350913300025138MarineMIRNLMTDIIIVGTAMFLIGTWLSTHHSHKMITQDHPEHKVRNFLIYTCIGIALITVGSNMMTDGLISRLKGEA
Ga0209337_105246913300025168MarineMIRNLMTDIIIVGTAMFLIGTWLSTHHSHKMITQDHPEHKVRNFLIYTCIGIALITVGSNMMTDG
Ga0209193_1000170333300025816Pelagic MarineMIRNLMTDIIVVGTAMFLIGTWLSTHHSHKMITQEHPEHKVRNFLIYTCIGIAFITVGSNMMTDGLISRLQGKA
Ga0208645_115046313300025853AqueousALFLIGTWLSSHHTHKVVTQEHPEHRVRQFLIYTCIGVCLMTVGSNMMTDGVVERLKGSGEA
Ga0247594_103430323300026448SeawaterMKPQPDVRSKGVDVMRRLLKDVIVVGTALFVLGTWMTSHHSHKVITQEHPDHKVRDFLIYTCVGIALITVGSNMMT
Ga0247600_104732323300026461SeawaterMKPQPDVRSKGVDVMRRLLKDVIVVGTALFVLGTWMTSHHSHKIVTQEHPDHKVRDFLIYTCVGIALITVGSNMMTDGFVSRLR
Ga0247588_106399333300026465SeawaterAERLPMKPQPDVRSKGVDVMRRLLKDVIVVGTALFVLGTWMTSHHSHKIVTQEHPDHKVRDFLIYTCVGIALITVGSNMMTDGFVSRLRGD
Ga0209709_1001549043300027779MarineMVKHLLTDIIIVGTAMFLIGTWLSSHHSHKMITGNHPEHKVREFLIYTCVGIALITVGSNMMTDGLISRLKRNA
Ga0209090_1022827923300027813MarineMIKHLLTDIIIVGTAMFLIGTWLSSHHSHKIITGNHPEHKVREFLIYTCVGIALITVGSNMMTDGLISRLKRNA
Ga0209089_1001880323300027838MarineVIKHLLTDIIIVGTALFVVGTWMTSHHTHKVVTGDHPEHKVREFLIYTCVGVALITMGSNMMTDGFIHRLSGDVA
Ga0209402_1047121813300027847MarineTDTIIVGTVLFVVGTWITSHHSHKVITQDHPEHKVRDFLIYTCGGIALITIGSNMITDGFMSRLGGN
(restricted) Ga0233414_1007489443300028045SeawaterQVLVDSEDVFTMRMGTLMTDVVVIGSALFLIGTWLSSHHTHKVVTQKHPEHRVRQFLIYTCIGVCFMTVGSNMMTDGVVERLKGSGEA
Ga0228649_108768013300028132SeawaterMKPQPDVRSKGVDVMRRLLKDVIVVGTALFVLGTWMTSHHSHKVITQEHPDHKVRDFLIYTCVGIALITVGSNMMTDGFVSRLRGD
Ga0256412_112314923300028137SeawaterMKPQPDVRSKGVDVMRRLLKDVIVVGTALFVLGPWMTSHHSHKVITQEHPDHKVRDFLIYTCVGIALITVGSNMMTDGFVSRLR
Ga0257118_108256023300028173MarineMGTLMTDVVVIGSALFLIGTWLSSHHTHKVVTQKHPEHRVRQFLIYTCIGVCFMTVGSNMMTDGVVERLKG
Ga0257122_104788123300028177MarineMMKKMVNNLLTDIIIVGTAMFLIGTWLSSHHSHKMITGEHPDHKIREFLIYTCVGIALITVGSNLMTDGIISRLKGEA
Ga0257106_1000031783300028194MarineVDTKTLLTDVLIVGTVLFVVGTWITSHHSHKIVTQDHPEHRVRDFLIYTCAGIALITVGSNMITDSMISRLGGN
Ga0307488_1014795723300031519Sackhole BrineVIMIKHLLTDIIIVGTAMFLIGTWLSSHHSHKIITGNHPEHKVREFLIYTCVGIALITVGSNMMTDGLISRLKRNA
Ga0308142_101934413300031556MarineVNTKTLLTDTIIVGTVLFVVGTWITSHHSHKVITQDHPEHKVRDFLIYTCGGIALITIGSNMITDGFMSRLG
Ga0307992_121644023300031601MarineVNTKTILTDVIIVGTVLFVIGTWVTSHHSHKVITQDHPEHRVRDFLIYTCGGIALITVGSNMITDGLMSRLKGD
Ga0307992_129849513300031601MarineVNTKTLLTDTIIVGTVLFVVGTWITSHHSHKIITQGHPEHKVREFLLYTCGGIALITIGSNMITDGFVSRLKGD
Ga0307985_1014580623300031629MarineMSNLDQITVMHMILNLMTDIIIVGTAMFLIGTWLSTHHSHKMITQDHPEHKVREFLIYTCVGIALITIGSNMMTEGLISRLQSND
Ga0307985_1023591213300031629MarineMSNLDQLTVMYMILNLMTDIIIVGTAMFVIGTWLSTHHSHKMITQDHPEHKVREFLIYTCVGIALITIGSNMMTEGLISRLQSND
Ga0315331_1000589153300031774SeawaterMTDVIVIGSALFLIGTWLSSHHTHKVITQKHPEHRVRQFLIYTCIGVCLMTVGSNMMTDGVVERLKGSGEA
Ga0315331_10011164133300031774SeawaterMKWLMTDILVVGTGLFLIGTWISSHHSHAVVTGDHPDHKVREFLIYTCVGVALITVGSNMMTDGLIGRLKGE
Ga0310121_1004163143300031801MarineVIKHLLTDIIIVGTALFVVGTWLSSHHTHKVVTGDHPDHKVREFLIYTCIGLALITVGSNMITDGFIHRLSGDAA
Ga0310120_1022623113300031803MarineALFVIGTLMTSHHAHKVITGDHPEHKVREFLIYTCVGIALITVGSNMMTDGFVQRLRGE
Ga0315316_1000791293300032011SeawaterMGRIIYPEGGSMKWLMTDILVVGTGLFLIGTWISSHHSHAVVTGDHPDHKVREFLIYTCVGVALITVGSNMMTDGLIGRLKGE
Ga0348336_172114_3_2183300034375AqueousMTDVIVIGSALFLIGTWLSSHHTHKVVTQEHPEHRVRQFLIYTCIGVCLMTVGSNMMTDGVVERLKGSGEA

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.