Metagenome / Metatranscriptome Family F078358

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078358
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	89 residues
Representative Sequence	MAKNTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLPLSASDVIRLAVTRLRDQLPEKELRKALIAHVRSEAERYPGRARRGLPEG
Number of Associated Samples	74
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	83.62 %
% of genes near scaffold ends (potentially truncated)	22.41 %
% of genes from short scaffolds (< 2000 bps)	77.59 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (31.897 % of family members)
Environment Ontology (ENVO)	Unclassified (43.966 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (54.310 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.49% β-sheet: 0.00% Coil/Unstructured: 53.51%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF02633	Creatininase	9.48
PF04471	Mrr_cat	1.72
PF13302	Acetyltransf_3	1.72
PF00589	Phage_integrase	1.72
PF14358	DUF4405	1.72
PF08282	Hydrolase_3	1.72
PF00561	Abhydrolase_1	1.72
PF07702	UTRA	0.86
PF13424	TPR_12	0.86
PF14280	DUF4365	0.86
PF09118	GO-like_E_set	0.86
PF00072	Response_reg	0.86
PF00805	Pentapeptide	0.86
PF01402	RHH_1	0.86
PF01609	DDE_Tnp_1	0.86
PF13419	HAD_2	0.86
PF00005	ABC_tran	0.86
PF00801	PKD	0.86
PF14657	Arm-DNA-bind_4	0.86
PF01580	FtsK_SpoIIIE	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG1402	Creatinine amidohydrolase/Fe(II)-dependent FAPy formamide hydrolase (riboflavin and F420 biosynthesis)	Coenzyme transport and metabolism [H]	9.48
COG0560	Phosphoserine phosphatase	Amino acid transport and metabolism [E]	1.72
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	1.72
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	1.72
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	1.72
COG3769	Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamily	Carbohydrate transport and metabolism [G]	1.72
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.86
COG1674	DNA segregation ATPase FtsK/SpoIIIE or related protein	Cell cycle control, cell division, chromosome partitioning [D]	0.86
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.86
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.86
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.86
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.86
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.86
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
cellular organisms	root	All Organisms → cellular organisms	48.28 %
Viruses	superkingdom	All Organisms → Viruses	1.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.28 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	37.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	33.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	26.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.72 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.86 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.86 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	5.17 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	4.31 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.72 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.72 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	1.72 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.72 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.86 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.86 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.86 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.86 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.86 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	5.17 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	4.31 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	1.72 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.72 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.72 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.86 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.86 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.86 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.86 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.86 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.86 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.86 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3.45 %
unclassified Geodermatophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae	3.45 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1.72 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1.72 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.72 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples	0.86 %
Modestobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter	0.86 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.86 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.86 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.86 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.86 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.86 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.86 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Geodermatophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	3.45 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3.45 %
Pseudonocardia petroleophila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia petroleophila	1.72 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1.72 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.72 %
Modestobacter marinus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → Modestobacter marinus	0.86 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	0.86 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.86 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.86 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.86 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.86 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.86 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.86 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig510312	Not Available	1303	Open in IMG/M
3300000550\|F24TB_10394137	Not Available	1396	Open in IMG/M
3300000956\|JGI10216J12902_103437637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	2150	Open in IMG/M
3300000956\|JGI10216J12902_105974032	Not Available	717	Open in IMG/M
3300003373\|JGI25407J50210_10056655	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300003373\|JGI25407J50210_10064232	All Organisms → cellular organisms → Bacteria → Terrabacteria group	920	Open in IMG/M
3300003373\|JGI25407J50210_10117031	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300004479\|Ga0062595_101395013	Not Available	638	Open in IMG/M
3300005562\|Ga0058697_10016307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2541	Open in IMG/M
3300005562\|Ga0058697_10058155	All Organisms → cellular organisms → Bacteria	1502	Open in IMG/M
3300005562\|Ga0058697_10395621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → Modestobacter marinus	684	Open in IMG/M
3300005562\|Ga0058697_10462971	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300005937\|Ga0081455_10202547	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1485	Open in IMG/M
3300005937\|Ga0081455_10540816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	773	Open in IMG/M
3300005981\|Ga0081538_10001596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	23263	Open in IMG/M
3300005981\|Ga0081538_10034543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3340	Open in IMG/M
3300006844\|Ga0075428_100623232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1151	Open in IMG/M
3300006845\|Ga0075421_101999724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	617	Open in IMG/M
3300006847\|Ga0075431_101193768	Not Available	724	Open in IMG/M
3300006969\|Ga0075419_10706372	Not Available	715	Open in IMG/M
3300009100\|Ga0075418_10189676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2189	Open in IMG/M
3300009100\|Ga0075418_12146051	Not Available	609	Open in IMG/M
3300009147\|Ga0114129_10431930	All Organisms → cellular organisms → Bacteria	1730	Open in IMG/M
3300009147\|Ga0114129_10916094	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300009147\|Ga0114129_13278113	Not Available	524	Open in IMG/M
3300009789\|Ga0126307_11454955	Not Available	555	Open in IMG/M
3300009810\|Ga0105088_1010547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1365	Open in IMG/M
3300009821\|Ga0105064_1124279	Not Available	542	Open in IMG/M
3300009840\|Ga0126313_10004579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8173	Open in IMG/M
3300010036\|Ga0126305_10838798	Not Available	626	Open in IMG/M
3300010038\|Ga0126315_10177871	Not Available	1272	Open in IMG/M
3300010042\|Ga0126314_10732435	Not Available	726	Open in IMG/M
3300010395\|Ga0058701_10646025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	584	Open in IMG/M
3300010395\|Ga0058701_10717282	Not Available	548	Open in IMG/M
3300011003\|Ga0138514_100102755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	621	Open in IMG/M
3300012199\|Ga0137383_10059715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia petroleophila	2736	Open in IMG/M
3300012201\|Ga0137365_10284426	Not Available	1227	Open in IMG/M
3300012204\|Ga0137374_10006481	All Organisms → cellular organisms → Bacteria	13936	Open in IMG/M
3300012204\|Ga0137374_10022198	All Organisms → cellular organisms → Bacteria → Terrabacteria group	7163	Open in IMG/M
3300012204\|Ga0137374_10024632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6727	Open in IMG/M
3300012204\|Ga0137374_10025619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6574	Open in IMG/M
3300012204\|Ga0137374_10030944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5854	Open in IMG/M
3300012204\|Ga0137374_10037068	All Organisms → cellular organisms → Bacteria	5223	Open in IMG/M
3300012204\|Ga0137374_10062302	All Organisms → cellular organisms → Bacteria	3734	Open in IMG/M
3300012204\|Ga0137374_10109597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	2575	Open in IMG/M
3300012204\|Ga0137374_10134485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	2243	Open in IMG/M
3300012204\|Ga0137374_11128415	Not Available	555	Open in IMG/M
3300012206\|Ga0137380_10666525	Not Available	905	Open in IMG/M
3300012209\|Ga0137379_11169129	Not Available	676	Open in IMG/M
3300012211\|Ga0137377_10102402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia petroleophila	2714	Open in IMG/M
3300012349\|Ga0137387_10567654	Not Available	823	Open in IMG/M
3300012350\|Ga0137372_10049929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	3703	Open in IMG/M
3300012353\|Ga0137367_10125922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1878	Open in IMG/M
3300012353\|Ga0137367_10334236	All Organisms → Viruses → Predicted Viral	1080	Open in IMG/M
3300012353\|Ga0137367_10389151	Not Available	989	Open in IMG/M
3300012353\|Ga0137367_10881195	Not Available	617	Open in IMG/M
3300012354\|Ga0137366_11175667	Not Available	523	Open in IMG/M
3300012355\|Ga0137369_10108918	All Organisms → cellular organisms → Bacteria	2259	Open in IMG/M
3300012355\|Ga0137369_10414224	Not Available	969	Open in IMG/M
3300012355\|Ga0137369_10860235	Not Available	613	Open in IMG/M
3300012356\|Ga0137371_10044251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	3439	Open in IMG/M
3300012356\|Ga0137371_11083886	Not Available	603	Open in IMG/M
3300012357\|Ga0137384_11017663	Not Available	666	Open in IMG/M
3300012358\|Ga0137368_10107827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	2143	Open in IMG/M
3300012358\|Ga0137368_10142834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1779	Open in IMG/M
3300012358\|Ga0137368_10268379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1170	Open in IMG/M
3300012360\|Ga0137375_10415819	Not Available	1170	Open in IMG/M
3300012360\|Ga0137375_10522833	Not Available	1005	Open in IMG/M
3300012532\|Ga0137373_10103632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2481	Open in IMG/M
3300012532\|Ga0137373_10151253	All Organisms → cellular organisms → Bacteria	1959	Open in IMG/M
3300012532\|Ga0137373_10315805	All Organisms → Viruses → Predicted Viral	1237	Open in IMG/M
3300012532\|Ga0137373_10671129	Not Available	775	Open in IMG/M
3300014487\|Ga0182000_10003350	Not Available	3399	Open in IMG/M
3300014487\|Ga0182000_10069031	Not Available	1110	Open in IMG/M
3300014487\|Ga0182000_10095956	Not Available	986	Open in IMG/M
3300014487\|Ga0182000_10192155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	775	Open in IMG/M
3300014487\|Ga0182000_10592023	Not Available	534	Open in IMG/M
3300014488\|Ga0182001_10417350	Not Available	590	Open in IMG/M
3300014965\|Ga0120193_10010604	Not Available	876	Open in IMG/M
3300015262\|Ga0182007_10222122	Not Available	668	Open in IMG/M
3300018066\|Ga0184617_1080336	Not Available	883	Open in IMG/M
3300018465\|Ga0190269_10923936	Not Available	648	Open in IMG/M
3300018466\|Ga0190268_10473772	Not Available	838	Open in IMG/M
3300018466\|Ga0190268_11646185	Not Available	568	Open in IMG/M
3300018476\|Ga0190274_10086120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2440	Open in IMG/M
3300018476\|Ga0190274_11166264	Not Available	853	Open in IMG/M
3300019377\|Ga0190264_11847180	Not Available	546	Open in IMG/M
3300019377\|Ga0190264_12222429	Not Available	512	Open in IMG/M
3300019767\|Ga0190267_10739277	Not Available	641	Open in IMG/M
3300026670\|Ga0208216_103672	Not Available	532	Open in IMG/M
3300026673\|Ga0208847_102551	Not Available	522	Open in IMG/M
3300027018\|Ga0208475_1001301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2276	Open in IMG/M
3300027277\|Ga0209846_1007915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1829	Open in IMG/M
3300027577\|Ga0209874_1098974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	696	Open in IMG/M
3300027718\|Ga0209795_10066031	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300027907\|Ga0207428_10975246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	596	Open in IMG/M
3300027961\|Ga0209853_1067065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	960	Open in IMG/M
3300028711\|Ga0307293_10143204	Not Available	761	Open in IMG/M
3300028719\|Ga0307301_10254524	Not Available	574	Open in IMG/M
3300028814\|Ga0307302_10307492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	780	Open in IMG/M
3300028878\|Ga0307278_10528623	Not Available	514	Open in IMG/M
3300030496\|Ga0268240_10169911	Not Available	546	Open in IMG/M
3300031093\|Ga0308197_10400269	Not Available	537	Open in IMG/M
3300031548\|Ga0307408_100592413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	984	Open in IMG/M
3300031731\|Ga0307405_10272359	Not Available	1270	Open in IMG/M
3300031740\|Ga0307468_101840325	Not Available	575	Open in IMG/M
3300031824\|Ga0307413_10337304	Not Available	1158	Open in IMG/M
3300031903\|Ga0307407_11593369	Not Available	518	Open in IMG/M
3300031911\|Ga0307412_10466646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1044	Open in IMG/M
3300032002\|Ga0307416_100197223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1906	Open in IMG/M
3300032002\|Ga0307416_102211300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	651	Open in IMG/M
3300032002\|Ga0307416_102368236	Not Available	631	Open in IMG/M
3300032004\|Ga0307414_11650268	Not Available	598	Open in IMG/M
3300032126\|Ga0307415_100611562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	971	Open in IMG/M
3300032159\|Ga0268251_10461370	Not Available	562	Open in IMG/M
3300034172\|Ga0334913_001437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8951	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.97%
Host-Associated	Host-Associated	31.03%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.10%
Plants	Host-Associated → Plants	31.03%
Aquatic	Environmental → Aquatic	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.24%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.10%
Phylloplane	Host-Associated → Plants → Phylloplane	6.90%
Roots	Host-Associated → Plants → Roots	4.31%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.72%
Sediment	Environmental → Aquatic → Sediment	0.86%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.10%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	6.90%
Sand	Environmental → Terrestrial → Soil → Sand	4.31%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	4.31%
Loam	Environmental → Terrestrial → Soil → Loam	3.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.86%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	54.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.10%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	6.90%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	4.31%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	4.31%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.86%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.86%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.86%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	31.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.21%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	8.62%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	6.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.03%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.31%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	4.31%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	4.31%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.59%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.72%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.86%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.86%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.86%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.86%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010395	Agave microbial communities from Guanajuato, Mexico - Or.Ma.e	Host-Associated	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300014965	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T2	Environmental	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300026670	Grasslands soil microbial communities from Nunn, Colorado, USA, that are Nitrogen fertilized - NN1111 (SPAdes)	Environmental	Open in IMG/M
3300026673	Grasslands soil microbial communities from Nunn, Colorado, USA, that are Nitrogen fertilized - NN1116 (SPAdes)	Environmental	Open in IMG/M
3300027018	Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN575 (SPAdes)	Environmental	Open in IMG/M
3300027277	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027718	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300034172	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_03766690	2124908045	Soil	MDAPQSRSYHRTTIYLTEEQRQWLTRLAAQARLEGSTLSASDVIRYALTSLQERLPEEELREAVIKHVHSEAKLYPGRARRGLPPGSASDAPRP
F24TB_103941373	3300000550	Soil	MDSTAQKGYHRTTVYLTDEQRQWLSRIAAQARLDGLPLSASDVIRLALARLQTELPDSELRDELIAHVRAEAAVYPGRARRGLPK*
JGI10216J12902_1034376371	3300000956	Soil	APSRLQGVGSRVQGEPPMDAQRSHSYHRTTIYLTEEQRQWLTRLAAQARLEGSTLSASDVIRYALTSVQERLSEAELREAVIKHVHNEAKLYPGRARRGLPPDSSSDDAS*
JGI10216J12902_1059740321	3300000956	Soil	MERASGKVYQRTTIYLTAEQRQWLRRVAARAQLDDLPISASDLVRLALTRLRDQLTDDQLRKALIAHVRAEVEEYP
JGI25407J50210_100566552	3300003373	Tabebuia Heterophylla Rhizosphere	MAKNTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLPLSASDVIRLAVSRLHDQLSEKELRKALIAHVRSEAEQYPGRARRGLPDA*
JGI25407J50210_100642322	3300003373	Tabebuia Heterophylla Rhizosphere	MAKNTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLPLSASDVIRLAVTRLRDQLSDKELRKALIAHVRSEAERYPGRARRGLPEG*
JGI25407J50210_101170312	3300003373	Tabebuia Heterophylla Rhizosphere	MAKNPAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLYLSASDVIRLAVTRLHDQLTERELRRALIAHIRSEAERYPG
Ga0062595_1013950131	3300004479	Soil	MPSSRTTERPSTSPTYVTDEQWRWLSRLAAQARLDELSLSASDVIRLAITRLQDQLSNDDDLRTELIAHVRAEAKQYPGRARRGLPGDQPKT*
Ga0058697_100163072	3300005562	Agave	MAKNTPGSYHRTTIYLTDEQWRWLSRLAAQARLDDLPLSASDVIRLAVTRLRDQLPDRELRKALIAHVRSEAERYPGRARRGLPEG*
Ga0058697_100581552	3300005562	Agave	MAKNTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLPLSASDVIRLAVTRLQDQLSDKELRKAVIAHVRSEAERYPGRARRDLPEG*
Ga0058697_103956212	3300005562	Agave	MAKNTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLPLSACDVIRLAVSRLRDQLPEKELRKALIAHVRS
Ga0058697_104629711	3300005562	Agave	MAKNTAGSYHRTTIYLTDEQWRWLSRLSAQARLDDLPLSASDVIRLAVTRLRDQLPEKELRKALIAHVRSEAERYPGRARRGLPEG*
Ga0081455_102025472	3300005937	Tabebuia Heterophylla Rhizosphere	MNGQQSRSYHRTTIYLTEEQRQWLTRLAAQAKLEGSTLSASDVIRYALTSLQERVPEAELREAVIKHVHNEAKLYPGRARRGLPPDSSSDTPTS*
Ga0081455_105408161	3300005937	Tabebuia Heterophylla Rhizosphere	MAKNTAGSYHRTTIYLTDEQWRWLSRLAAQARLDLPLSASDVIRLAVTRLRDQLSEEELRKALIAHVRSEAERYPGRARRGLPQG*
Ga0081538_100015962	3300005981	Tabebuia Heterophylla Rhizosphere	MAQDAKRSYHRTTIYVTDEQWRWLSRLAAQARLDELSLSASDVIRLAIARLQDQLSNDDDLRAELIAHVRAEAKQYPGRARRGLPGDEPKT*
Ga0081538_100345431	3300005981	Tabebuia Heterophylla Rhizosphere	MAKNSAGSYHRTTVYLTDEQWRWLSRLAAQARLDDLPLSASDVIRLAVTRLRDQLPEKKLRKALIAHVRSEAERYPGRARGGLPEG*
Ga0075428_1006232321	3300006844	Populus Rhizosphere	MAKNTPGSYHRTTIYLTDEQWRWLSRLAAQARLDDLPLSASDVIRLAVTRLRDQLTDRELRKALIAHVRSEAERYPGRARRGLPEG*
Ga0075421_1019997242	3300006845	Populus Rhizosphere	MTKNTAGSYHRTTIYLTDEQWRWLSRLSAQARLDDLPLSASDVIRLAVTRLRDQLSEKELRKALIAHVRSEAERYPGRARRGLPEG*
Ga0075431_1011937682	3300006847	Populus Rhizosphere	MESRSRKVYQRTTVYLTAEQRQWLRRVAAQAQLNDVPMSASDVVRLAIARLRDQLPDDKLREALIAHIQAEVEEYPGRARRGLPQEIHPQD*
Ga0075419_107063722	3300006969	Populus Rhizosphere	MTKNTAGSYHRTTIYLTDEQWRWLSLLSAQARLDDLPLSASDVIRLAVTRLRDQLSEKELRKALIAHVRSEAERYPGRARRGLPEG*
Ga0075418_101896761	3300009100	Populus Rhizosphere	GSMAKNTPGSYHRTTIYLTDEQWRWLSRLAAQARLDDLPLSASDVIRLAVTRLRDQLPDRELRKALIAHVRSEAERYPGRARRGLPEG*
Ga0075418_121460513	3300009100	Populus Rhizosphere	MAKNTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLPLSASDVIRLAVTRLRDQLPDRELRKALITHVRSEAERYPGRARRGLPEG*
Ga0114129_104319301	3300009147	Populus Rhizosphere	TTIYLTDEQWRWLSRLAAQARLDDLPLSASDVIRLAVTRLRDQLPEKELRKALIAHVRSEAERYPGRARRGLPEG*
Ga0114129_109160942	3300009147	Populus Rhizosphere	MAQDTQRSYHRTTIYVTDEQWRWLSRLAAQARMDELPLSASDVIRLAVARLRDQLSEDDLRTELIAHVRAEAKQYPGRARRGLPKEQPQS*
Ga0114129_132781131	3300009147	Populus Rhizosphere	MAQDTQRSYHRTTIYVTDEQWRWLSRLAAQARMDELPLSASDVIRLAVARLRDQFSEDELRTELIAHVHAEAKQYPGRARRGLPKEQPQS
Ga0126307_114549551	3300009789	Serpentine Soil	MAKNTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLPLSASDVIRLAVTRLRDQLPEKELRKALIAHVRSEAERYPGRARRGLPEG*
Ga0105088_10105471	3300009810	Groundwater Sand	MDAQRSRSYHRTTIYLTEEQRQWLTRLAAHARLEGSTLSASDVIRYALTTLQDRLSEAELREAVIKHVHSEAKLYPGRARRGLPPD
Ga0105064_11242791	3300009821	Groundwater Sand	TIYLTEEQRQWLTRLAAHARLEGSTLSASDVIRYALTTLQDRLSEAELREAVIKHVHSEAKLYPGRARRGLPPDSSSDAPSP*
Ga0126313_1000457911	3300009840	Serpentine Soil	MAKNTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLPLSASDVIRLAVTRLRDQLSEKELRKALIAHVRSEAERYPGRARRGLPEG*
Ga0126305_108387981	3300010036	Serpentine Soil	MVKNTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLPLSASDVIRLAVTRLRDQLPEKELRKALIAHVRSEAERYPGRARRGLPEG*
Ga0126315_101778711	3300010038	Serpentine Soil	MAKHTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLPLSASDVIRLAVTRLRDQLPEKELRKALIAHVRSEAERYPGRARRGLPEG*
Ga0126314_107324351	3300010042	Serpentine Soil	MAKHTAGSYHRTTIYLTDEQWRWLSRLSAPARLDDLPLSASDVIRLAVTRLRDQLPEKELRKALIAHVRSEAERYPGRARRGLPEG*
Ga0058701_106460252	3300010395	Agave	MAKNTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLPLSASDVIRLAVTRLRDQLPEKELRKALIAHVRSEAERYPGRGLPE
Ga0058701_107172821	3300010395	Agave	MAKNTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLPLSASDVIRLAVARLHDQLSETELRKALVAHVRSEAERYPGRARRGLPEG*
Ga0138514_1001027552	3300011003	Soil	RLAAQAKLDGSTLSASDVIRYALTTLQERLPEAKLREAVIKHVHTEAKLYPGRARRGLPPDSSPDRSSR*
Ga0137383_100597155	3300012199	Vadose Zone Soil	MDAQPSRSYHRTTIYLTEEQHQWLTRLAAQARLEGSTLSASDVIRYALTSLQERLPETELREAVIKHVHSEAKLYPGRARRGLPPDSSSDAPKP*
Ga0137365_102844262	3300012201	Vadose Zone Soil	MEPRSGKVYQRTTVYLTAEQRQWLRRVAAQAQLDDMPMSASDVVRLAIARLRDQLPDDKLRKALIAHIQAEVEEYPGRARRGLPQEIRAQD*
Ga0137374_100064814	3300012204	Vadose Zone Soil	MEPGSGKVYQRTTVYLTAEQRRWLRRIAAQAQLNDVPISASDVVRLAVTRLRDQLTDDKLRKALIAHVQAEVEEYPGRARRGLPKEIGPQD*
Ga0137374_100221986	3300012204	Vadose Zone Soil	MAQDAQRSYHRTTIYVTDEQWRWLSRLAAQARLDELSLSASDVIRLAVARLRDQLSDADLRTELIAYVRAEAKQYPGRARRGLPKDDRASG*
Ga0137374_100246324	3300012204	Vadose Zone Soil	MAEQPMRSYHRTTIYVTEEQRRWLSRIAAQAKLDGLALSASDVIRFALTTLHRQMDDAELRKALIEHVHAEAKQYPGRAKRGLPTSSETDHHTP*
Ga0137374_100256198	3300012204	Vadose Zone Soil	MDAQQSRSYHRTTIYLTEEQHQWLTRLAAQARLEGSTLSASDVIRYALTSVQERLPEPELREAVIKHVHNEAKLYPGRARRGLPPESSSDAPKP*
Ga0137374_100309443	3300012204	Vadose Zone Soil	MAPAAEFEATSMDAQRPRAYHRTTIYLTEEQRQWLTRLAAQARLDGSTLSASDVIRYALTTVQERMPEAELREAVIKHIHNEAKLYPGRARRGLPRDSAPDAPNR*
Ga0137374_100370687	3300012204	Vadose Zone Soil	MDAQQSRSYHRTTIYLTEEQHQWLTRLAAQARLEGSTLSASDVIRYALTSLQEHVPEAELREAVIKHVHNEAKLYPGRARRGLPPESSSDAPKS*
Ga0137374_100623024	3300012204	Vadose Zone Soil	MDAQQSRSYHRTTIYLTEEQHQWLTRLAAQARLEGSTLSASDVIRYALTSVQERLAEAELREAVIKHVHNEAKLYRGRARRGLPPDSSSDAPKP*
Ga0137374_101095971	3300012204	Vadose Zone Soil	MDAQQSRSYHRTTVYLTEEQRQWLTRLAAQARLEGSTLSASDVIRYALTSLQERLPEPELREAVIKHVHDEAKLYRGRARRGLPPDSSS
Ga0137374_101344854	3300012204	Vadose Zone Soil	MESRSGKVYQRTTVYLTAEQRQWLRRVAAQAQLNDVPMSASDVVRLAIARLRDQLSDDKLRKALIAHIRAEVEEYPGRARRGLPQEIRPQD*
Ga0137374_111284151	3300012204	Vadose Zone Soil	MDAQQSRSYHRTTIYLTEEQHQWLTRLAAQARLEGSTLSASDVIRYALTSVQERLPEAELREAVIKHVHNEAKLYPGRARRGLPPESSSDAPKS*
Ga0137380_106665251	3300012206	Vadose Zone Soil	MDAQQSRSYHRTTIYLTEEQHQWLTRLAAQARLEGSTLSASDVIRYALTSLQERLPEAELREAVIKHVHSEAKLYPGRARRGLPPDSSSDAPKP*
Ga0137379_111691292	3300012209	Vadose Zone Soil	MGAQQPRSYHRTTIYLTEEQRQWLTRLAAQARLEGSTLSASDVIRYALTTLQERLSETELREAVIKHVHSEAKLYPGRARRGLPPGSSSEGSTPREH*
Ga0137377_101024021	3300012211	Vadose Zone Soil	MDAQPSRSYHRTTIYLTEEQHQWLTRLAAQARLEGSTLSASDVIRYALTSLQERLPETELREAVIKHVHSEAKLYPGRARRGLPP
Ga0137387_105676542	3300012349	Vadose Zone Soil	MNDQPSRSYHRTTIYLTEEQRQWLTRLAAQARLEGSTLSASDIIRYALTSLQDRLPEAELREAVIKHVHNEAKLYPGRARRGLPPDSSSDAPSP*
Ga0137372_100499293	3300012350	Vadose Zone Soil	MDGQQSRSYHRTTIYLTEEQRKWLTRLAAQARLEGSTLSASDVIRYALTSLQERLSEAELREAVIKHIHNEAKLYPGRAKRGLPPDSSSDARDQGHS*
Ga0137367_101259221	3300012353	Vadose Zone Soil	MDAQQSRSYHRTTIYLTEEQHQWLTRLAAQARLEGSTLSASDVIRYALTSLQERVPEAELREAVIKHVHNEAKLYPGRARRGLPPESSSDAPKS*
Ga0137367_103342362	3300012353	Vadose Zone Soil	MDDQQSRSYHRTTIYLTEEQRKWLTRLAAQARLEGSTLSASDVIRYALTSLQERLSEAELREAVIKHIHNEAKLYPGRAKRGLPPDSSSDARDQGHS*
Ga0137367_103891511	3300012353	Vadose Zone Soil	MDVQQSRSYHRTTIYLTEEQHQWLTRLAAQARLEGSTLSASDVIRYALTSVQERLPEAELREAVIKHVHSEAKLYRGRARRGLPPESSSDAPNS*
Ga0137367_108811951	3300012353	Vadose Zone Soil	MDAQRPRAYHRTTIYLTEEQRQWLTRLAAQARLDGSTLSASDVIRFALTSLQERLPEAELREAVIEHVHNEAKLYPGRARRGLPPDSASDAASP*
Ga0137366_111756671	3300012354	Vadose Zone Soil	EEQHQWLTRLAAQARLEGSTLSASDVIRYALTSVQERLPEAELREAVIKHVHNEAKLYPGRARRGLPPESSSDAPKP*
Ga0137369_101089183	3300012355	Vadose Zone Soil	MDAPQPRSYHRTTIYLTEEQRQWLTRLAAQARLEGSTLSASDVIRYALTSLQARLPEAELREAVIKHVHSEAKLYPGRARRGLPPDSSSDAPSP*
Ga0137369_104142242	3300012355	Vadose Zone Soil	MERASGKVYQRTTIYLTAEQRQWLRRVAARAQLDDLPISASDLVRLALTRLRDQLTDDQLRKALIAHVRAEVEEYPGRARRGLPREIRPQD*
Ga0137369_108602351	3300012355	Vadose Zone Soil	LTEEQRQWLTQLAAQARLEGSTLSASDVIRYARPAVQERLSEAELREAVIKHVRNEAKLYPGRAKRGLPPDSSSEGR*
Ga0137371_100442515	3300012356	Vadose Zone Soil	MDAQQSRSYHRTTVYLTEEQRQWLTRLAAQARLEGSTLSASDVIRYALTSLQERLPEPELREAVIKHVHDEAKLYRGRARRGLPPDSSSDAPRS*
Ga0137371_110838862	3300012356	Vadose Zone Soil	MDAQQSRSYHRTTIYLTEEQHQWLTRLAAQARLDGSTLSASDVIRYALTSLQERLDEAELREAVVKHVHNEAKLYPGRARRGLPPESSSDAPKP*
Ga0137384_110176631	3300012357	Vadose Zone Soil	MDAQQSRSYHRTTIYLTEEQHQWLTRLAAQARLEGSTLSASDVIRYALTSLQERLPETELREAVIKHVHSEAKLYPVRARWGLPP
Ga0137368_101078271	3300012358	Vadose Zone Soil	MDAPQSRSYHRTTIYLTEEQRQWLTRLAAQARLEGSTLSASDVIRYALTSLQERLPEAELREAVIKHVHSEAKLYPGRARRGLPPDSSPDAPSP*
Ga0137368_101428342	3300012358	Vadose Zone Soil	MDVQQSRSYHRTTIYLTEEQHQWLTRLAAQARLEGSTLSASDVIRYALTSVQERLPEAELREAVIKHVHNEAKLYPGRASRGLPPESSSDATKS*
Ga0137368_102683791	3300012358	Vadose Zone Soil	MDAPQPRSYHRTTIYLTEEQRQWLTRLAAQARLEGSTLSASHVIRYALTSLQARMPEAELREAVIKHVHSEAKLYPGRARRGLPPDSSSDAPSP*
Ga0137375_104158191	3300012360	Vadose Zone Soil	MDAQQSRSYHRTTIYLTEEQHRWLTRLAAQARLEGSTLSASDVIRYALTSVQERLPEAELREAVIKHVHNEAKLYRGRARRGLPPDSSSDAPKS*
Ga0137375_105228332	3300012360	Vadose Zone Soil	MDAQQSRSYHRTTIYLTEEQHQWLTRLAAQARLEGSTLSASDVIRYALTSVQERLPEPELREAVIKHVHNEAKLYPGRARRGLPPESSSDAPK
Ga0137373_101036321	3300012532	Vadose Zone Soil	RGVMAEQPMRSYHRTTIYVTEEQRRWLSRIAAQAKLDGLALSASDVIRFALTTLHRQMDDAELRKALIEHVHAEAKQYPGRAKRGLPTSSETDHHTP*
Ga0137373_101512531	3300012532	Vadose Zone Soil	WLRRIAAQAQLNDVPISASDVVRLAVTRLRDQLTDDKLRKALIAHVQAEVEEYPGRARRGLPKEIGPQD*
Ga0137373_103158052	3300012532	Vadose Zone Soil	MESETTKSYHRTTIYLTGEQRRWLSQVSARARLDGLGLSASDVIRLALARLQNQLSEDELRHEVIAHVQAEAKNYPGRAKRGLPMT*
Ga0137373_106711291	3300012532	Vadose Zone Soil	MDGQQPRSYHRTTIYLTEEQRKWLTRLAAQARLEGSTLSASDVIRYALTSLQEHLSEAELREAVIKHIHKEAKLYPGRAKRGLPPGSSPDAPSL*
Ga0182000_100033501	3300014487	Soil	MAKNTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLPLSASDVIRLAVTRLHGQLSETQLRKALVAHVRSEAERYPGRARRGLPEG*
Ga0182000_100690311	3300014487	Soil	MQACVNAKEPHSYHWTTIYLTKEQRQWPTRLAAQARLEGSTLSASDVIRYALTSVQERLSEAELREAVIKHVHSEAKLYPGRARRGLPPDSSSQGA*
Ga0182000_100959562	3300014487	Soil	MAKNTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLSLSASDIIRLAVTRLRDQLPEKELRKALITHVRSEAERYPGRARRGLPEG*
Ga0182000_101921552	3300014487	Soil	MAKNTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLPLSASDVIRLAVTRLRDQLPEKELRKALIAHVRSEAEQYPGRARRGLPEG*
Ga0182000_105920232	3300014487	Soil	MAKNTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLPLSASDVIRLAVTRLQDQLSETELRKAVIAHVRSEAERYPGRARRGLPEG*
Ga0182001_104173501	3300014488	Soil	MAKNTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLQLSASDVMRLAVTRLHDQLPDKELRKALIAHVRSEAERYPGRARRG
Ga0120193_100106041	3300014965	Terrestrial	MERASGKVYQRPTIYLTAEQRQWLRRVAARAQLDDLPISASDLVRLALTRLRDQLTDDQLRKALIAHVRAEVEEYPGRARRGLPREIRPQD*
Ga0182007_102221222	3300015262	Rhizosphere	MAKNTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLPLSASDVIRLAVSRLRDQLPEKELRKALIAHVRSEAERYPGRARRGLPEG*
Ga0184617_10803362	3300018066	Groundwater Sediment	MAKNTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLSLSASDVIRLAVTRLQDQLPEKELRKALIAHVRSEAERYPGRARRGLPDG
Ga0190269_109239361	3300018465	Soil	MAKNTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLPLSASDVIRLAVTRLRDQLPEKELRKALIAHVRSEAERYPGRARRGLPEG
Ga0190268_104737721	3300018466	Soil	MDAPQSRSYHRTTIYITEEQRQWLTRLAAQARLEGSTLSASDVIRYALTSLQERLLEEELREAVIKHVHSEAKLYPGRARRGLPPDSASDAPRS
Ga0190268_116461851	3300018466	Soil	MAKNTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLPLSASDVIRLAVTRLQDQLAEKELRKALIAHVRSEAERYPGRARRGLPEG
Ga0190274_100861201	3300018476	Soil	TTIYLTDEQWRWLSRLAAQARLDDLPLSASDVIRLAVTRLRDQLPDRELRKALIAHVRSEAERYPGRARRGLPEG
Ga0190274_111662641	3300018476	Soil	MAQDAKRSYHRTTIYVTDEQWRWLSRLAAQARLDELSLSASDVIRLAITRLQDQLSNDDDLRTELIAHVRAEAKQYPGRARRGLPGDEPKT
Ga0190264_118471802	3300019377	Soil	MAKKTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLQLSASDVIRLAVTRLHDQLPEKELRKALIAHVRSEAERYPGRARRGLPDG
Ga0190264_122224291	3300019377	Soil	ELPRRGSMAKNTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLPLSASDVIRLAVTRLRDQLPEKELRKALIAHVRSEAERYPGRARRGLPEG
Ga0190267_107392771	3300019767	Soil	MAKNTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLQLSASDVIRLAVTRLHDQLPDKELRKALIAHVRSEAEQYPGRARRGLPEG
Ga0208216_1036721	3300026670	Soil	MAKHTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLPLSASDVIRLAVTRLHDQLSEKELRKALVAHVRSEAERYPGRARRGLPQG
Ga0208847_1025511	3300026673	Soil	MAKHTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLPLSASDVIRLAVARLHDQLSETELRKALVAHVRSEAERYPGRARRGLPEG
Ga0208475_10013011	3300027018	Soil	MAKNTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLPLSASDVIRLAVSRLRDQLPEKELRKALIAHVRSEAERYPGRARRGLPEG
Ga0209846_10079153	3300027277	Groundwater Sand	MDAQRSRSYHRTTIYLTEEQRQWLTRIAAQARLEGSTLSASDVIRYALTTLQDRLSEAELREAVIKHVHSEAKLYPGRARRGL
Ga0209874_10989742	3300027577	Groundwater Sand	MDAQRSRSYHRTTIYLTEEQRQWLTGLAAQARLEGSTLSASDVIRYALTTLQDRLSEAELREAVIKHVHSEAKLYPGRARRGLPPDSSSDAPSP
Ga0209795_100660312	3300027718	Agave	MAKNTPGSYHRTTIYLTDEQWRWLSRLAAQARLDDLPLSASDVIRLAVARLHDQLSETELRKALVAHVRSEAERYPGRARRGLPEG
Ga0207428_109752461	3300027907	Populus Rhizosphere	MAKNTPGSYHRTTIYLTDEQWRWLSRLAAQARLDDLPLSASDVIRLAVTRLRDQLPDRELRKALIAHVRSEAERYPGRARRGLPEG
Ga0209853_10670652	3300027961	Groundwater Sand	MDTPRSRSYHRTTIYLTEEQRQWLTGLAAQARLEGSTLSASDVIRYALTTLQDRLSEAELREAVIKHVHSEAKLYPGRARRGLPPDSSSDAPKP
Ga0307293_101432041	3300028711	Soil	MAKNTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLQLSASDVIRLAVTRLHDQLPDKELRKALIAHVRSEAERYPGRARRGLPDG
Ga0307301_102545241	3300028719	Soil	MAKDTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLQLSASDVIRLAVTRLHDQLPDKELRKALIAHVRSEAERYPGRARRGLPDG
Ga0307302_103074922	3300028814	Soil	MAKKTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLQLSASDVIRLAVTRLHDQLPDKELRKALIAHVRSEAERYPGRARRGLPDG
Ga0307278_105286231	3300028878	Soil	SPCHLDSTAPVTEFEANFMDSPKSRSYHRTTIYVTEEQRQWLTRLAAQARLEGSTLSASDVIRYALTSLQERLPEAELRQAVIKHVHSEAKLYPGRARRGLPPDSSSDAPSP
Ga0268240_101699111	3300030496	Soil	MAKNTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLPLSASDVIRLAVTRLRDQLSEKELRKALIAHVRSEAERYPGRARRGLPKG
Ga0308197_104002691	3300031093	Soil	MAKNTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLQLSASDVIRLAVTRLHDQLPDKELRKALIAHVRSEAERYPGRARRGLPD
Ga0307408_1005924132	3300031548	Rhizosphere	MAKNTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLPLSASDVIRLAVTRLRDQLPEKELRKALIAHVRSEAEQYPGRARRGLPEG
Ga0307405_102723592	3300031731	Rhizosphere	MAKNTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLPLSASDVIRLAVTRLRDQLSEKELRKALIAHVRSEAERYPGRARRGLPEG
Ga0307468_1018403252	3300031740	Hardwood Forest Soil	MAQDAKRSYHRTTIYVTDEQWRWLSRLAAQARLDELSLSASDVIRLAIARLQDQLSNDDDLRTELIAHVRAEAKQYPGRARRGLPGDQPKT
Ga0307413_103373042	3300031824	Rhizosphere	MAKNTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLPLSASDVIRLAVSRLQDQLSERELRKALIAHVRSEAEQYPGRARRGLPEG
Ga0307407_115933691	3300031903	Rhizosphere	MAKDTAGSYHRTTIYLTDEQWRWLSRLAAQARLDNLQLSASDVIRLAVTRLHDQLPEKELRKALIAHVRSEAERYPGRARRGLPDG
Ga0307412_104666462	3300031911	Rhizosphere	MAKHTAGSYHRTTIYLTDEQWRWLSPLAAQARLDDLPLSASDVIRLAVTRLHDQLPDTELRKALIAHVRSEAEQYPGRARRGLPQG
Ga0307416_1001972231	3300032002	Rhizosphere	MDAPQSRSYHRTTIYLTEEQRQWLTRLAAQARLEGSTLSASDVIRYALTSLQERLPEEELREAVIKHVHSEAKLYPGRARRGLPPGSASDARSP
Ga0307416_1022113002	3300032002	Rhizosphere	MAKHTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLSLSASDVIRLAVTRLRDQLPEKELRKALIAHVRSEAEQYPGRARRGLPEG
Ga0307416_1023682361	3300032002	Rhizosphere	VDDRRAKSYHRTTVYLTDEQRQWLNRIAAQARLDRVSLSAADVVRLAIVRLQQQLSEDELRQALIEHVHAEAEQYPGRVKRGLPGA
Ga0307414_116502681	3300032004	Rhizosphere	MAKNTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLSLSASDVIRLAVTRLRDQLPEKELRKALIAHVRSEAEQYPGRARRGLPQG
Ga0307415_1006115622	3300032126	Rhizosphere	MAKNTAGSYHRTTIYLTDEQWRWLSRLAAQARLDDLSLSASDVIRLAVTRLRDQLPEKELRKALIAHVRSEAEQYPGRARRGLPEG
Ga0268251_104613701	3300032159	Agave	MDAQQSRSYHRTTIYLTEEQHQWLTRLAAQARLEGSTLSASDVIRYALTSVQERLPEAELREAVIKHVHNEAKLYRGRARRGLPPDSSSDAAKS
Ga0334913_001437_8261_8572	3300034172	Sub-Biocrust Soil	MAPVTEFEANSMDAPQSRSYHRTTIYLTEEQRQWLTRLAAQARLEGSTLSASDVIRYALTSLQERLPEDQLREAVIKHVHTEAKLYPGRARRGLPPGSASDAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078358

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences