Metagenome Family F078362

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F078362
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	81 residues
Representative Sequence	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRERRSGRLSFGRWADEWWEVWAADPDRSPT
Number of Associated Samples	85
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	97.35 %
% of genes near scaffold ends (potentially truncated)	96.55 %
% of genes from short scaffolds (< 2000 bps)	94.83 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (59.483 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (31.034 % of family members)
Environment Ontology (ENVO)	Unclassified (38.793 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (37.069 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.03% β-sheet: 18.35% Coil/Unstructured: 48.62%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF13148	DUF3987	18.10
PF10935	DUF2637	1.72
PF02371	Transposase_20	1.72
PF08241	Methyltransf_11	0.86
PF09339	HTH_IclR	0.86
PF00196	GerE	0.86
PF12307	DUF3631	0.86
PF01609	DDE_Tnp_1	0.86
PF09250	Prim-Pol	0.86
PF01527	HTH_Tnp_1	0.86
PF01610	DDE_Tnp_ISL3	0.86
PF13683	rve_3	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.72
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.86
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.86
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.86
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.86
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.86
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.86
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.48 %
All Organisms	root	All Organisms	40.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.48 %
cellular organisms	root	All Organisms → cellular organisms	40.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.48 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.48 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	35.34 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.48 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	32.76 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.72 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.86 %
Candidatus Dormibacteraeota	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota	0.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.48 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	32.76 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.72 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.86 %
unclassified Candidatus Dormibacteraeota	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota	0.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.48 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.72 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.72 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.86 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.86 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.86 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.48 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.72 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.86 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.86 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.86 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.86 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.48 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.72 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.86 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.86 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.86 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.86 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.86 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.48 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.72 %
Frankia soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia soli	0.86 %
Actinoplanes nipponensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes nipponensis	0.86 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.86 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.86 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.86 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.86 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004463\|Ga0063356_103753892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	654	Open in IMG/M
3300005562\|Ga0058697_10682919	Not Available	545	Open in IMG/M
3300005981\|Ga0081538_10285933	Not Available	611	Open in IMG/M
3300006844\|Ga0075428_100140087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2630	Open in IMG/M
3300006844\|Ga0075428_101273723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	774	Open in IMG/M
3300006845\|Ga0075421_100451486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	1536	Open in IMG/M
3300006880\|Ga0075429_100775615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	840	Open in IMG/M
3300009094\|Ga0111539_10625658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1253	Open in IMG/M
3300009094\|Ga0111539_13186434	Not Available	529	Open in IMG/M
3300009100\|Ga0075418_10826958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1000	Open in IMG/M
3300009100\|Ga0075418_11043588	Not Available	885	Open in IMG/M
3300009147\|Ga0114129_11200005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	945	Open in IMG/M
3300009147\|Ga0114129_12928592	Not Available	564	Open in IMG/M
3300009147\|Ga0114129_13093105	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	544	Open in IMG/M
3300009162\|Ga0075423_12030872	Not Available	623	Open in IMG/M
3300009789\|Ga0126307_10337927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1212	Open in IMG/M
3300009789\|Ga0126307_10670300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	837	Open in IMG/M
3300009798\|Ga0105060_100171	All Organisms → cellular organisms → Bacteria	1900	Open in IMG/M
3300009820\|Ga0105085_1017933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1224	Open in IMG/M
3300009821\|Ga0105064_1006776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia soli	1969	Open in IMG/M
3300009840\|Ga0126313_10406213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1081	Open in IMG/M
3300010039\|Ga0126309_11046495	Not Available	551	Open in IMG/M
3300010040\|Ga0126308_10449610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	865	Open in IMG/M
3300010040\|Ga0126308_10948440	Not Available	601	Open in IMG/M
3300010041\|Ga0126312_10527686	Not Available	846	Open in IMG/M
3300010042\|Ga0126314_10257998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1238	Open in IMG/M
3300010042\|Ga0126314_11031474	Not Available	611	Open in IMG/M
3300010044\|Ga0126310_10937829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes nipponensis	677	Open in IMG/M
3300010045\|Ga0126311_10596079	Not Available	874	Open in IMG/M
3300010045\|Ga0126311_11237181	Not Available	619	Open in IMG/M
3300010166\|Ga0126306_10218491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1445	Open in IMG/M
3300010362\|Ga0126377_13134162	Not Available	534	Open in IMG/M
3300012204\|Ga0137374_10593051	Not Available	846	Open in IMG/M
3300012210\|Ga0137378_10575532	Not Available	1035	Open in IMG/M
3300012353\|Ga0137367_10793709	Not Available	657	Open in IMG/M
3300012356\|Ga0137371_11049804	Not Available	615	Open in IMG/M
3300012358\|Ga0137368_10963968	Not Available	514	Open in IMG/M
3300012360\|Ga0137375_10532812	Not Available	992	Open in IMG/M
3300014487\|Ga0182000_10160420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	824	Open in IMG/M
3300015372\|Ga0132256_101815624	Not Available	718	Open in IMG/M
3300015374\|Ga0132255_105282721	Not Available	547	Open in IMG/M
3300018028\|Ga0184608_10339904	Not Available	659	Open in IMG/M
3300018465\|Ga0190269_11813880	Not Available	521	Open in IMG/M
3300018466\|Ga0190268_11699897	Not Available	562	Open in IMG/M
3300018466\|Ga0190268_11966166	Not Available	536	Open in IMG/M
3300018469\|Ga0190270_11356672	Not Available	756	Open in IMG/M
3300018476\|Ga0190274_11340516	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300018481\|Ga0190271_12642261	Not Available	602	Open in IMG/M
3300019377\|Ga0190264_12183927	Not Available	515	Open in IMG/M
3300021510\|Ga0222621_1070497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	737	Open in IMG/M
3300022694\|Ga0222623_10113674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1054	Open in IMG/M
3300027561\|Ga0209887_1037789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1078	Open in IMG/M
3300027718\|Ga0209795_10155948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	644	Open in IMG/M
3300027873\|Ga0209814_10389767	Not Available	612	Open in IMG/M
3300027909\|Ga0209382_10520934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1306	Open in IMG/M
3300028592\|Ga0247822_11916567	Not Available	508	Open in IMG/M
3300028707\|Ga0307291_1084482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	784	Open in IMG/M
3300028717\|Ga0307298_10047501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1172	Open in IMG/M
3300028717\|Ga0307298_10050748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1137	Open in IMG/M
3300028718\|Ga0307307_10239090	Not Available	579	Open in IMG/M
3300028719\|Ga0307301_10238201	Not Available	593	Open in IMG/M
3300028722\|Ga0307319_10135705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	795	Open in IMG/M
3300028771\|Ga0307320_10211359	Not Available	760	Open in IMG/M
3300028771\|Ga0307320_10325341	Not Available	612	Open in IMG/M
3300028771\|Ga0307320_10442695	Not Available	523	Open in IMG/M
3300028778\|Ga0307288_10338947	Not Available	604	Open in IMG/M
3300028782\|Ga0307306_10192705	Not Available	581	Open in IMG/M
3300028787\|Ga0307323_10274155	Not Available	607	Open in IMG/M
3300028791\|Ga0307290_10296130	Not Available	593	Open in IMG/M
3300028811\|Ga0307292_10005236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4379	Open in IMG/M
3300028811\|Ga0307292_10460990	Not Available	543	Open in IMG/M
3300028814\|Ga0307302_10016819	Not Available	3295	Open in IMG/M
3300028814\|Ga0307302_10600053	Not Available	547	Open in IMG/M
3300028819\|Ga0307296_10652498	Not Available	575	Open in IMG/M
3300028824\|Ga0307310_10090610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1345	Open in IMG/M
3300028875\|Ga0307289_10061940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1504	Open in IMG/M
3300028876\|Ga0307286_10079504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1137	Open in IMG/M
3300028876\|Ga0307286_10119924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	932	Open in IMG/M
3300028878\|Ga0307278_10311534	Not Available	695	Open in IMG/M
3300028880\|Ga0307300_10031588	All Organisms → cellular organisms → Bacteria	1443	Open in IMG/M
3300028880\|Ga0307300_10094859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	895	Open in IMG/M
3300028881\|Ga0307277_10141905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1038	Open in IMG/M
3300028881\|Ga0307277_10424369	Not Available	595	Open in IMG/M
3300030336\|Ga0247826_11389788	Not Available	567	Open in IMG/M
3300030510\|Ga0268243_1019284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1336	Open in IMG/M
3300030511\|Ga0268241_10186154	Not Available	522	Open in IMG/M
3300030516\|Ga0268255_10254197	Not Available	505	Open in IMG/M
3300031548\|Ga0307408_101973865	Not Available	561	Open in IMG/M
3300031731\|Ga0307405_11780636	Not Available	547	Open in IMG/M
3300031731\|Ga0307405_11848385	Not Available	538	Open in IMG/M
3300031824\|Ga0307413_10305156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1209	Open in IMG/M
3300031824\|Ga0307413_11897139	Not Available	535	Open in IMG/M
3300031852\|Ga0307410_12013100	Not Available	515	Open in IMG/M
3300031901\|Ga0307406_10884854	Not Available	759	Open in IMG/M
3300031903\|Ga0307407_11448083	Not Available	542	Open in IMG/M
3300031995\|Ga0307409_101441264	Not Available	715	Open in IMG/M
3300031995\|Ga0307409_101498905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	702	Open in IMG/M
3300031995\|Ga0307409_102163864	Not Available	586	Open in IMG/M
3300031995\|Ga0307409_102234490	Not Available	576	Open in IMG/M
3300032002\|Ga0307416_100638190	All Organisms → cellular organisms → Bacteria → Proteobacteria	1148	Open in IMG/M
3300032002\|Ga0307416_101334314	Not Available	823	Open in IMG/M
3300032002\|Ga0307416_101527596	Not Available	773	Open in IMG/M
3300032002\|Ga0307416_102804815	Not Available	583	Open in IMG/M
3300032002\|Ga0307416_103810054	Not Available	505	Open in IMG/M
3300032004\|Ga0307414_10474513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1102	Open in IMG/M
3300032004\|Ga0307414_12291655	Not Available	504	Open in IMG/M
3300032005\|Ga0307411_11977036	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300032126\|Ga0307415_100715964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	905	Open in IMG/M
3300033550\|Ga0247829_11179242	Not Available	635	Open in IMG/M
3300033550\|Ga0247829_11207147	Not Available	627	Open in IMG/M
3300033550\|Ga0247829_11756568	Not Available	511	Open in IMG/M
3300033551\|Ga0247830_11044229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	652	Open in IMG/M
3300034115\|Ga0364945_0172236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	655	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	62.93%
Host-Associated	Host-Associated	37.07%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.34%
Plants	Host-Associated → Plants	37.07%
Aquatic	Environmental → Aquatic	2.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	31.90%
Sediment	Environmental → Aquatic → Sediment	2.59%
Phylloplane	Host-Associated → Plants → Phylloplane	2.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.72%
Floodplain	Environmental → Terrestrial → Floodplain	0.86%
Roots	Host-Associated → Plants → Roots	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	31.03%
Sand	Environmental → Terrestrial → Soil → Sand	3.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.59%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	2.59%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.86%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.86%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.86%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	50.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	31.03%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.17%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	3.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.59%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	2.59%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	31.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	18.10%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.07%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	11.21%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.17%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.59%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	2.59%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.72%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.86%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.86%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.86%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.86%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009798	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_40_50	Environmental	Open in IMG/M
3300009820	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027718	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300030511	Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)	Environmental	Open in IMG/M
3300030516	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0063356_1037538922	3300004463	Arabidopsis Thaliana Rhizosphere	MGSVSWRKRGDRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRERRSGRRSFSQWADDWWEVWAADPDRSPTTLA
Ga0058697_106829191	3300005562	Agave	MGSVTWRKRGHRYQVSWRLDDGSQGAKTVDSADEARDLAAEKRLELRRGTWQGRRRGRLPFSRWADEWWELYS
Ga0081538_102859332	3300005981	Tabebuia Heterophylla Rhizosphere	MGSVTWRKRGLRYQVSWRLDDGSQGAKTVDSADEARDLAAEKRLELRRGTWQGRRRGRLSFGRWADEWWELYSTDPDRSPNTLAITESRLRLHVRPWFGDLAQAWPPLPGLLAAG*
Ga0075428_1001400873	3300006844	Populus Rhizosphere	MGSVSWRKRGHRYLVSWRLDDGAQGGKTVDTPDEARDLAAQKRLEMRRGTWRGRQRGRLSFNAWAT
Ga0075428_1012737231	3300006844	Populus Rhizosphere	MGSVNWRKRGNRYQVAWRLDDGSQGAKTVATKDEALDLVAEKRLEMSRSTWQGRRRGRLPFSRWADEWWAVWS
Ga0075421_1004514862	3300006845	Populus Rhizosphere	MGSVNWRKRGNRYQVAWRLEDGSKGAKTVATKEEALDLVAEKRLEMSRNAWQGRRRGRLPFSRW
Ga0075429_1007756151	3300006880	Populus Rhizosphere	MGSVSWRKRGHRYLVSWRLADGSQGGKTVDTPDEARDLAAQKRLEMRRGTWRGRQRGRLSFNAWATEW
Ga0111539_106256581	3300009094	Populus Rhizosphere	MGSVSWRRRGHRYLVSWRLDDAQGGRTVDTPDEARDLAAEKRLEMRRGTWRERRSGREPFWQWADDWWDVWAADPDRSPTTLAAT
Ga0111539_131864341	3300009094	Populus Rhizosphere	MGSVNWRKRGNRYQVAWRLDDGSQGAKTVATKDEALDLVAEKRLEMRRSTWQGRRRGRHPFSQWAD
Ga0075418_108269581	3300009100	Populus Rhizosphere	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTPDEARDLAAQKRLEMRRGTWRGRQRGRLSFNAWATEWWETWVADEP
Ga0075418_110435881	3300009100	Populus Rhizosphere	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRERRSGRHSFRQWADDWWEVWAADP
Ga0114129_112000051	3300009147	Populus Rhizosphere	MGSVSWRKRGNRYLVSWRLDDGSQGGRTVATPDEARDLAAEKRLEMRRGTWRERRSGRLSFGRWA
Ga0114129_129285921	3300009147	Populus Rhizosphere	MGSVTWRKRGHRYQVSWRLDDGSQGAKTVDSADEARDLAAEKRLELRRGTWQGRRRGRLLFSRWADDWWELYSTDPDRSP
Ga0114129_130931052	3300009147	Populus Rhizosphere	LPGRSGSVSWRKRGHRYLVSWRLADGSQGGKTVDTPDEARDLAAQKRLEMRRGTWRGRQRGRLSFNAWATEWWDTWVADDPSPTSLASAESRLRLHLRPWF
Ga0075423_120308721	3300009162	Populus Rhizosphere	MGSVTWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAQKRLEMRRGTWRGRQRGRQSFNAWATEWWDTWVADEPSPTS
Ga0105249_102337403	3300009553	Switchgrass Rhizosphere	MGSVSWRKRGNRYLVSWRMDDGSQGGQTVDTPDEARDLAAEKRLEMRRGTWRGRQRGRLAF*
Ga0126307_103379271	3300009789	Serpentine Soil	MGSVNWRKRGNRYQVAWRLDDGSQGAKTVATKDEALDLVAEKRLEISRNTWQGRRRGRLPFGRWADEWWTVWSTDPSRSPTTLAATEIR
Ga0126307_106703002	3300009789	Serpentine Soil	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWQGRRRGRLPFSRWADEWWETWVADEPSPTSLASAE
Ga0105060_1001713	3300009798	Groundwater Sand	MGSVTWRKRGNRYQVSWRLDDGSQGAKTVDSADEARDLAAEKRLELRRGTWQGCRRGRLPFRRW
Ga0105085_10179331	3300009820	Groundwater Sand	MGSVNWRKRGNRYLVSWRLDDGAQGGKTVDTPDEARDLAAEKRLEMRRGTWRGRQRGRLPFSAWAAEWWETWAADDPSPTTLAATESWLRLHVRPWFA
Ga0105064_10067761	3300009821	Groundwater Sand	MGSVTWRKRGNRYQVSWRLDDGSQGAKTVDSADEARDLAAEKRLELRRGTWQGRRRGRLPFSRWA
Ga0126313_104062133	3300009840	Serpentine Soil	MGSVTWRKRGHRYQVSWRLDDGSQGAKTVDSADEARDLAAEKRLELRRGTWQGRRRGRLAFSRWADEWWELYSTDPDRSP
Ga0126309_110464952	3300010039	Serpentine Soil	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTPDDARDLAAEKRLEMRRGTWRGRQRGRLAFNAWAAEWWETWAADDPSPTTLAATE
Ga0126308_104496101	3300010040	Serpentine Soil	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRGRQRGRLSFNAWATEWWETWVADDPSPTSLASAESRLRLHV
Ga0126308_109484401	3300010040	Serpentine Soil	MGSVTWRKRGHRYQVSWRLDDGSQGAKTVDSADEARDLAAEKRLELRRGTWQGRRRGRLPFNRWADEWWVLYSTDPDRSPN
Ga0126312_105276861	3300010041	Serpentine Soil	MGSVSWRKRGNRYLVSWRLDDGSQGGRTVDTPDEARDLAAEKHLEMRRGTWRERRSGRLSFDRWAEDWWEVWAADPDRSPTTLAATENRLRRH
Ga0126314_102579981	3300010042	Serpentine Soil	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDSPDEARDLAAEKRLEMRRGAWRGRQRGRLPFSAWAAEWWETWAADAPSPTTLAATESWLRLHVLPWF
Ga0126314_110314741	3300010042	Serpentine Soil	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTPDEARDLAAQKRLEMRRGTWRGRQRGRLSFNAWATEWWETWVADEPSPTSLASAESRLRLHVRPWFADRPIDK
Ga0126310_109378291	3300010044	Serpentine Soil	MGSVSWRKRGNRYLVSWRMDDGSQGGKTVDTLDEARDLAAEKRLEMRRGTWRGRQRGRLPFSAWAAEWWETWAADDPSPTTL
Ga0126311_105960791	3300010045	Serpentine Soil	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDSPDEARDLAAEKRLEMRRGAWRGRQRGRLAFSAWAAEWWETWAADDPSPTTLAATENWLRLHV
Ga0126311_112371811	3300010045	Serpentine Soil	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTPDEARDLAAQKRLEMRRGTWRGRQRGQLAFSRWAAEWWETWTADDPSPTTLAATETW
Ga0126306_102184911	3300010166	Serpentine Soil	VSWRKRGHRYLVSWRLDDGSQGGKTVDTPDEARDLAAQKRLEMRRGTWRGHQRGRLSFNAWATEWWETWV
Ga0126377_131341621	3300010362	Tropical Forest Soil	MGSVSWRRRGNRYLVSWRLDDGSQGGRTVDTPDEASDLAAEKRLEMRRGTWRERRSGPRSFSHWVDDWWEVWAADPDRSPTTLAATE
Ga0137374_105930512	3300012204	Vadose Zone Soil	MGSVSWRKRGSRYLVSWRLDDGSQGGRTVDTADEARDLAAEKRLEIRRGTWRGRQRGRLPFSTWAAEWWE
Ga0137378_105755322	3300012210	Vadose Zone Soil	MGSVNWRKRGKRYLVYWRLDDGSQGGKTVGTRDEALLLAAEKRLEIARGTWTAQQKGKRPFGEWGDTWW
Ga0137367_107937091	3300012353	Vadose Zone Soil	MGSVSWRKRGSRYLVSWRLDDGSQGGKTVDTKDEALLLAAEKRLELARSTWTTQQKGKRPFGEWG
Ga0137371_110498041	3300012356	Vadose Zone Soil	VASVNWRKRGKRYLVYWRLDDGSQGGKTVGTKDEALLLAAEKRMELARSIGTTQQKGKRPFGEWGDTWW
Ga0137368_109639682	3300012358	Vadose Zone Soil	VSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWQGRQRGRLPFSTWAAEWWETWT
Ga0137375_105328122	3300012360	Vadose Zone Soil	VGSVSWRKRGRRYLVSWRLDDGSQGGRTVDTADEARDLAAEKRLEMRRGTWRGRQRGRLPFSTWATEWWETWTADDRSPTTFA
Ga0182000_101604201	3300014487	Soil	MGSVSWRKRGNRYLVSWRLDDGSQGGHTVDTPDQARDLAAEKRPEMRRGTWRERRSGRVSFSQWADDWWEV
Ga0132256_1018156241	3300015372	Arabidopsis Rhizosphere	MGSVTWRKRGHRYQVSWRLDDGTQGAKTVDSADEARDLAAEKRLELRRGTWQGRHRGRLTFSRWADEWWELYS
Ga0132255_1052827211	3300015374	Arabidopsis Rhizosphere	MGSVTWRKRGHRYQVSWRLDDGTQGAKTVDSADEARDLAAEKRLELRRGTWQGRHRGRLTFSRWADEWWELYSTDPDRSPNTLAITESRLRLHVR
Ga0184608_103399041	3300018028	Groundwater Sediment	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRVGTWRERRSGRLSFGQWADDWWEVWAADPDRSPTTLAATEN
Ga0190272_122407811	3300018429	Soil	MGSVTWRKRGHRYQVSWRLDDGSQGAKTVDSADEARDLAAEKRLELRRGTWQGRRRGRLPFS
Ga0190269_118138801	3300018465	Soil	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTLDEARDLAAEKRLEMRRGTWRERRSGRLSFGRWADDWWEVWAADPDRSPTTLAATENRLRRHVGPWFSDRPIERIG
Ga0190268_116998971	3300018466	Soil	MASVSWRKRGNRYLVSSRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTRGRGRSGRHSFSQWADDWWEVWAADPDRSPTTLAATDNRLR
Ga0190268_119661661	3300018466	Soil	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTPDEARDLAAQKRLEMRRGTWRGRQRGRLSFNAWATEWWET
Ga0190270_113566721	3300018469	Soil	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTQDEARDLAAQKRLEMRRGTWRGRQRGRLSFNAWATEWWETWAADDPSPTSLASAES
Ga0190274_113405161	3300018476	Soil	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRGRQRGRLPFSTWAAEWWETWAADDPSPTTLAATESWLRLHVRAWF
Ga0190271_126422611	3300018481	Soil	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRERRSGRLSFCQWVDD
Ga0190264_121839271	3300019377	Soil	MGSVNWRKRGNRYQVAWRLDDGSQSAKTVATKDEALDLVAEKRLEMSRNTWQGRRRGRLPFSRWADEW
Ga0222621_10704971	3300021510	Groundwater Sediment	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAQKRLELRRGTWRGRQRGRLSFNAWAT
Ga0222623_101136742	3300022694	Groundwater Sediment	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRERRSGRLSFSQWVDDWWEVWAADPDRSPTTLAATENRLRR
Ga0209887_10377891	3300027561	Groundwater Sand	VDAPAGRRLDDGAQGGKTVDTPDEARDLAAEKRLEMRRGTWRGRQRGRLPFSAWAAEWWETWAADDPSPTTLAATESWLRLHVRPWFADRPI
Ga0209795_101559482	3300027718	Agave	MGSVNWRKRGNRYQVAWRLDDGSQGAKTVATKDEALDLVAEKRLEMSRNTWQGRRRGRLSFSR
Ga0209814_103897671	3300027873	Populus Rhizosphere	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAQKRLEMRRGTWRGRQRGRLSFNAWATEW
Ga0209382_105209342	3300027909	Populus Rhizosphere	MGSVNWRKRGNRYQVAWRLEDGSQGAKTVATKEEALDLVAEKRLEMSRNAWQGRRRGRLPFSRWADEWWAVWSSDPSRS
Ga0247822_119165671	3300028592	Soil	MGSVTWRKRGHRYQVSWRLDDGSQGAKTVDSADEARDLAAEKRLELRRGTWQGRRRGRLSFSRW
Ga0307291_10844821	3300028707	Soil	MGSVSWRRRGNRYLVSWRLDDGSQGGRTVDTPDEARDLAAEKRLEMRRGTWRGLQSGRLSFGQWADDWWAVWAADPDRSPT
Ga0307298_100475011	3300028717	Soil	MGSVSWRRRGNRYLVSWRLDDGSQGGQTVDTPDEARDLTAEKRLEMRRGTWRERRSGRQPFRQWADDWWELWAADPDRSPTTLA
Ga0307298_100507481	3300028717	Soil	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRGRQRGRLSFSAWAAEWWETWAADDPSPTTLAATESWLRLHVRPWFADRP
Ga0307307_102390901	3300028718	Soil	MGSVSWRRRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAQKRLEMRRGTWRGRQRGRLSFNAWATEWWETWVADEPSPTSLASAESRLRLHLRPWFADRPIDKIT
Ga0307301_102382011	3300028719	Soil	MGSVSWRRRGNRYLVSWRLDDGSQGGKTVDTPDEARDLTAEKRLDMRRGTWRERRSGRQPFRQWADDWWELWAADPDRSPTTLAATENRLRRHVR
Ga0307319_101357052	3300028722	Soil	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTPDEARDLAAHKRLEMRRGTWRGRQRGRLSFNAWATEWWETWTADE
Ga0307319_101604741	3300028722	Soil	MGSVTWRKRGHRYQVSWRLDDGTQGAKTVDSADEARDLAAEKRLELRRGTWQGRRRGRLP
Ga0307320_102113591	3300028771	Soil	MGSVTWRKRGHRYQVSWRLDDGTQGAKTVDSADEARDLAAEKRLELRRGTWQGRRRGRLPFSRWADEWWELYSTDPDRSPNTLA
Ga0307320_103253411	3300028771	Soil	MALMGSVSWRRRGNRYLVSWRLEDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRGLQSGRLSFVQWADDWWA
Ga0307320_104426951	3300028771	Soil	MGSVSWRKRGNRYLVSWRLDDGAQGGKTVDTPDEARDLAAEKRLEMRRGTWRERRSGRLSFGQWADDWWEVWAADPDRSPTTLAA
Ga0307288_103389471	3300028778	Soil	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMHRGTWRGRQRGRLSFNAWATEWWDTWAADDRSPTTLAGAEIRLRLHVRPWFADRP
Ga0307306_101927051	3300028782	Soil	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRGRQRGRLSFSAWAAEWWETWATDDPSPTTLAATESWL
Ga0307323_102741551	3300028787	Soil	MGSVSWRRRGNRYLVSWRLDDGSQGGQTVDTPDEARDLTAEKRLEMRRGTWRERRSGRQPFRQWADDWWELWAADPDRSPTTLAATENRLRRHV
Ga0307290_102961301	3300028791	Soil	MGSVTWRKRGHRYQVSWRLDDGSQGAKTVDSADEARDLAAEKRLELRRGTWQGRRRGRLPFSRWADEWWELYSTDPDRSPNTLA
Ga0307292_100052361	3300028811	Soil	MGSVSWRRRGNRYLVSWRLDDGSQGGRTVDTPDEARDLAAEKRLEMRRGTWRGLQSGRLSFVQWADDWWAVWAADPDRSPTTLAATENRLRRHVRPWFGDRP
Ga0307292_104609901	3300028811	Soil	MGSVSWRRRGNRYLVSWRLDDGSQGGQTVDTPDEARDLTAEKRLEMRRGTWRERRSGRQPFRQWADDWWELWAADPDRSPTTLAATENRLRRHVRPWF
Ga0307302_100168191	3300028814	Soil	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTPDEARDLAAHKRLEMRRGTWRGRQRGRLSFNAWATEWWETWTAD
Ga0307302_106000531	3300028814	Soil	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMHRGTWRGRQRGRLSFNAWATEWWET
Ga0307296_106524981	3300028819	Soil	MGSVSWRRRGNRYLVSWRLDDGSQGGQTVDTPDEARDLTAEKRLEMRRGTWRERRSGRQPFRQWADDWWELWAADPDRSP
Ga0307310_100906102	3300028824	Soil	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMHRGTWRGRQRGRLSFNAWATEWWETWVADDPSPTSLASAESRLRLHV
Ga0307289_100619402	3300028875	Soil	MGSVSWRRRGNRYLVSWRLDDGSQGGRTVDTPDEARDLAAEKRLEMRRGTWRGLQSGRLSFVQWADDWWAVWA
Ga0307286_100795041	3300028876	Soil	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRGRQSGRLSFGQWADDWWAVW
Ga0307286_101199241	3300028876	Soil	MGSVSWRRRGNRYLVSWRLDDGSQGGRTVDTPDEARDLAAEKRLEMRRGTWRGLQSGRLSFVQWADDWWAVWAA
Ga0307278_103115342	3300028878	Soil	MGSVTWRKRGHRYQVSWRLDDGSQGAMTVDSANEARDLAAEKRLELRRGTWQGRRRGRLPFSRWADEWWE
Ga0307300_100315884	3300028880	Soil	MALMGSVSWRRRGNRYLVSWRLEDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRGLQSGRLSFGQWADDWWAVWAADPDRSPTTLAATENRLRRHVR
Ga0307300_100948591	3300028880	Soil	MGSVSWRRRGNRYLVSWRLDDGSQGGQTVDTPDEARDLTAEKRLEMRRGTWRERRSGRQPFRQWADDWWELWAADPDRSPTTLAATENRLRRHVRP
Ga0307277_101419051	3300028881	Soil	MGSVNWRKRGNRYQVAWRLDDGTQGAKTVAAKDEALDLVAEKRLEMSRSTWQGRRRGRLPFSQWADEWWGVWSTDPSRSPTTL
Ga0307277_104243691	3300028881	Soil	MGSVSWRRRGNRYLVSWRLDDGSQGGQTVDTPDEARDLTAEKRLEMRRGTWRERRSGRQPFRQWADDWWELWAADPDRSPTTLAATENRLRRHVRPWFG
Ga0247826_113897882	3300030336	Soil	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRERRSGRLSFGRWADEWWEVWAADPDRSPT
Ga0268243_10192842	3300030510	Soil	MGSVTWRRRGHRYQVSWRLDDGSQGAKTVDSADEARDLAAEKRLELRRGTWQGRRRGRLAFSRWADEWWELYSTDLDRSPNTLAITESRLRLHV
Ga0268241_101861541	3300030511	Soil	MGSVSWRKRGQRYLVSWRLDDGSQGGKTVDSPDEARDLAAEKRLEMRRGTWQGRRRGRIPFGKWADEWWAVWSTDPTRSPTTL
Ga0268255_102541971	3300030516	Agave	MGSVSWRRRGNRYLVSWRLDDGSQGGQTVDTPDEARDLAAEKRLEMRRGTWRERRSGRLSFSQWV
Ga0307408_1019738651	3300031548	Rhizosphere	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTSDEARDLAAQKRLEMRRGTWRGRQRGRLSFTAWATEWWETWVADEPSPTS
Ga0307405_117806361	3300031731	Rhizosphere	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDSPDEARDLAAEKRLEMRRGAWRGRQRGRLPFSTWAAEWWETW
Ga0307405_118483851	3300031731	Rhizosphere	MGSVSWRRRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRGRQSGRLSFGQWADDWWEVWAADPDRSPTTLAATENRLRRHVRPWFGD
Ga0307413_103051561	3300031824	Rhizosphere	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARNLAAEKRLEMRRGTWGRGRSGRHSFSQWADDWWEVWAADPDRSPTTL
Ga0307413_118971391	3300031824	Rhizosphere	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTPDEARDLAAQKRLEMRRGTWRGRQRGRLSFNAWATEWWETWVADEPSPTSLASAESRLRLHVRPWFA
Ga0307410_120131001	3300031852	Rhizosphere	MASVNWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRGRQRGRLPFSSWATEWWDTWAAD
Ga0307406_108848541	3300031901	Rhizosphere	MGSVSWRKRGNRYLVSWRLDDGSQGGRTVDTPDEARDLAAEKRLEMRRGTWRGRRSGRLSFGQWAEDWWEVWAADP
Ga0307407_114480831	3300031903	Rhizosphere	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDSPDEARDLAAEKRLEMRRGTWGRRRRGRQPFGQWADDWWAVWATDPDRSPTTL
Ga0307409_1014412641	3300031995	Rhizosphere	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARNLAAEKRLEMRRGTWRERRSGQRSFSQWADDWWEVWAADPDRSPTTLAATENRLRRHVRPWFG
Ga0307409_1014989051	3300031995	Rhizosphere	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAQKRLEMRRGTWRGRQRGRLSFNAWATEWWETWAADEPSPTSLASAESRL
Ga0307409_1021638641	3300031995	Rhizosphere	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTPDEARDLAAQKRLEMRRGTWRGRQRGRLSFNAWATEWWETWVADEPSPTS
Ga0307409_1022344901	3300031995	Rhizosphere	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTSDEARDLAAQKRLEMRRSTWRGRQRGRLSFNAWATEWWETWIADEPSPTSLASAESRLRLHLRPWFA
Ga0307416_1006381903	3300032002	Rhizosphere	MGSVNWRKRGNRYQIAWRLDDGTQGAKTVATKDEALDLVAEKRLEMRRSTWQGRRRGRLPFSQWADEWWAV
Ga0307416_1013343141	3300032002	Rhizosphere	MGSVSWRRRGNRYLVSWRLDDGTQGGKTVDTPDEARDLAAEKRLEMRRGTWRGRQSGRLSFGQWADDWWEVWAADPDRSPTTLAAT
Ga0307416_1015275962	3300032002	Rhizosphere	MGSVSWRKRGNRYLVSWRLDDGSQGGRTVDTPDEARDLAAEKRLEMRRGTWRGRRSGRLSFGQWAEDWWEVWAADPDRSPTTLAAT
Ga0307416_1028048151	3300032002	Rhizosphere	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRGRQRGRLAFSA
Ga0307416_1038100541	3300032002	Rhizosphere	MGSVNWRKRGNRYQVAWRLDDGTQGAKTVATKDEALDLVAEKRLEISRSTWQGRRRGRLPFSKWADEWWGVWSSDPSRSPTTLAATE
Ga0307414_104745131	3300032004	Rhizosphere	MGSVNWRKRGHRYLVSWRMDDGSQGGKTVDTPDEARDLAAEKRLEMRRGSWRGRQRGRLAFNAWAAEWWETWAADDPSPTTLAA
Ga0307414_122916551	3300032004	Rhizosphere	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTPDEARDLAAQKRLEMRRGTWRGHQRGRLSFNAWATEWWETWVADDPSLTSLASAE
Ga0307411_119770361	3300032005	Rhizosphere	MGSVSWRKRGNRYLVSWRLDDGSQGGRTVDTPDEARDLAAEKRLEMRRGSWRGRQRGRLSFSAWATEW
Ga0307415_1007159641	3300032126	Rhizosphere	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRERRSGRHSFSQWADDWWEVWAADPDRSPTTLAATENRLRRHVRP
Ga0247829_111792421	3300033550	Soil	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTPDEARDLAAQKRLEMRCGTWRGRQRGRLSFNAWAAEWWDTWAADDPSPTTLASAESWLRLHVRPWFADRPIDKI
Ga0247829_112071472	3300033550	Soil	MGSVTWRKRGHRYQVSWRLDDGSQGAKTVDSAGEARDLAAEKRLELRRGTWQGRRRGRLPFNRWADEWW
Ga0247829_117565681	3300033550	Soil	MGSVSWRKRGNRYLVSWRLDDGSQGGKTVDTPDEARDLTAEKRLEMRRGTWRGRQRGQLAFSAWAAEWWET
Ga0247830_110442291	3300033551	Soil	MGSVNWRKRGNRYQVAWRLDDGSQGAKTVATKDEALDLVAEKRLEMSHNTWQGRRRGRLPFSRWADEWWA
Ga0364945_0172236_461_655	3300034115	Sediment	MGSVSWRKRGHRYLVSWRLDDGSQGGKTVDTPDEARDLAAEKRLEMRRGTWRGRQRGRLSFNAWT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F078362

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences