Metagenome Family F078372

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078372
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	111 residues
Representative Sequence	VILVLVSIGVWHTVSKIWTAIKLHTDDDGTVATDDQMLAKRWSRRQAILYIALAAIGCGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLLDAVYSLSQRIDL
Number of Associated Samples	85
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.61 %
% of genes near scaffold ends (potentially truncated)	92.24 %
% of genes from short scaffolds (< 2000 bps)	91.38 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.621 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere (13.793 % of family members)
Environment Ontology (ENVO)	Unclassified (52.586 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (76.724 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.00% β-sheet: 0.00% Coil/Unstructured: 40.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF03575	Peptidase_S51	6.03
PF00072	Response_reg	2.59
PF12762	DDE_Tnp_IS1595	2.59
PF12796	Ank_2	1.72
PF06210	DUF1003	1.72
PF14559	TPR_19	1.72
PF01734	Patatin	1.72
PF05637	Glyco_transf_34	0.86
PF13519	VWA_2	0.86
PF00092	VWA	0.86
PF01435	Peptidase_M48	0.86
PF07494	Reg_prop	0.86
PF04273	BLH_phosphatase	0.86
PF01980	TrmO	0.86
PF12867	DinB_2	0.86
PF04389	Peptidase_M28	0.86
PF16656	Pur_ac_phosph_N	0.86
PF03621	MbtH	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	1.72
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	1.72
COG4420	Uncharacterized membrane protein	Function unknown [S]	1.72
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	1.72
COG1720	tRNA (Thr-GGU) A37 N6-methylase	Translation, ribosomal structure and biogenesis [J]	0.86
COG3251	MbtH family protein, regulates adenylation domains of NRPSs	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.86
COG3292	Periplasmic ligand-binding sensor domain	Signal transduction mechanisms [T]	0.86
COG3453	Predicted phosphohydrolase, protein tyrosine phosphatase (PTP) superfamily, DUF442 family	General function prediction only [R]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.62 %
Unclassified	root	N/A	16.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.62 %
Unclassified	root	N/A	16.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.62 %
Unclassified	root	N/A	16.38 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	62.93 %
Unclassified	root	N/A	16.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.59 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.72 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	1.72 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.38 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.45 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.72 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.86 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.86 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.45 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.72 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.86 %
Candidatus Angelobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter	0.86 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.86 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.86 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.45 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.72 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.86 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.86 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.86 %
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	0.86 %
unclassified Candidatus Angelobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.45 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.72 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.86 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.86 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.86 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.86 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.45 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.72 %
Gimesia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia	0.86 %
Sphingomonas mali	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas mali	0.86 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.86 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.86 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.45 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.72 %
Gimesia aquarii	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia → Gimesia aquarii	0.86 %
Sphingomonas mali	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas mali	0.86 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.86 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.86 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459015\|G14TP7Y01EO4DX	All Organisms → cellular organisms → Bacteria → Acidobacteria	714	Open in IMG/M
3300002899\|JGIcombinedJ43975_10052696	All Organisms → cellular organisms → Bacteria → Acidobacteria	689	Open in IMG/M
3300004114\|Ga0062593_102792766	All Organisms → cellular organisms → Bacteria → Acidobacteria	557	Open in IMG/M
3300004157\|Ga0062590_101325075	All Organisms → cellular organisms → Bacteria → Acidobacteria	711	Open in IMG/M
3300004157\|Ga0062590_101618133	All Organisms → cellular organisms → Bacteria → Acidobacteria	656	Open in IMG/M
3300004157\|Ga0062590_102109193	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300004157\|Ga0062590_102877309	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300004157\|Ga0062590_102903025	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300004643\|Ga0062591_102709964	All Organisms → cellular organisms → Bacteria → Acidobacteria	524	Open in IMG/M
3300005289\|Ga0065704_10532895	All Organisms → cellular organisms → Bacteria → Acidobacteria	646	Open in IMG/M
3300005295\|Ga0065707_10522293	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300005334\|Ga0068869_100888243	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300005334\|Ga0068869_101483783	Not Available	602	Open in IMG/M
3300005337\|Ga0070682_100886742	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300005340\|Ga0070689_101972706	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300005345\|Ga0070692_10229204	All Organisms → cellular organisms → Bacteria → Acidobacteria	1102	Open in IMG/M
3300005345\|Ga0070692_10299405	Not Available	981	Open in IMG/M
3300005345\|Ga0070692_11326228	Not Available	517	Open in IMG/M
3300005364\|Ga0070673_100169231	All Organisms → cellular organisms → Bacteria → Proteobacteria	1864	Open in IMG/M
3300005364\|Ga0070673_100373202	All Organisms → cellular organisms → Bacteria → Acidobacteria	1270	Open in IMG/M
3300005365\|Ga0070688_100354642	All Organisms → cellular organisms → Bacteria → Acidobacteria	1075	Open in IMG/M
3300005365\|Ga0070688_100750470	All Organisms → cellular organisms → Bacteria → Acidobacteria	759	Open in IMG/M
3300005440\|Ga0070705_100075060	All Organisms → cellular organisms → Bacteria	2057	Open in IMG/M
3300005441\|Ga0070700_100562731	All Organisms → cellular organisms → Bacteria → Acidobacteria	887	Open in IMG/M
3300005444\|Ga0070694_101920762	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300005455\|Ga0070663_102136839	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300005456\|Ga0070678_101661951	All Organisms → cellular organisms → Bacteria → Acidobacteria	600	Open in IMG/M
3300005459\|Ga0068867_100352160	All Organisms → cellular organisms → Bacteria → Acidobacteria	1229	Open in IMG/M
3300005471\|Ga0070698_100009931	All Organisms → cellular organisms → Bacteria	10175	Open in IMG/M
3300005518\|Ga0070699_100517182	All Organisms → cellular organisms → Bacteria → Acidobacteria	1085	Open in IMG/M
3300005535\|Ga0070684_102115911	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300005543\|Ga0070672_102040732	Not Available	517	Open in IMG/M
3300005544\|Ga0070686_100508273	All Organisms → cellular organisms → Bacteria → Acidobacteria	936	Open in IMG/M
3300005546\|Ga0070696_101814898	Not Available	527	Open in IMG/M
3300005547\|Ga0070693_100466894	All Organisms → cellular organisms → Bacteria → Acidobacteria	889	Open in IMG/M
3300005548\|Ga0070665_102641496	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300005563\|Ga0068855_100709336	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300005577\|Ga0068857_100173694	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia → Gimesia aquarii	1959	Open in IMG/M
3300005578\|Ga0068854_102251440	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300005617\|Ga0068859_101106155	All Organisms → cellular organisms → Bacteria → Acidobacteria	872	Open in IMG/M
3300005617\|Ga0068859_101542009	All Organisms → cellular organisms → Bacteria → Acidobacteria	734	Open in IMG/M
3300005617\|Ga0068859_101955472	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300005617\|Ga0068859_103014915	Not Available	514	Open in IMG/M
3300005618\|Ga0068864_100170970	All Organisms → cellular organisms → Bacteria	1981	Open in IMG/M
3300005618\|Ga0068864_100403471	All Organisms → cellular organisms → Bacteria	1299	Open in IMG/M
3300005618\|Ga0068864_101922078	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300005841\|Ga0068863_100667226	All Organisms → cellular organisms → Bacteria → Acidobacteria	1032	Open in IMG/M
3300005841\|Ga0068863_101047186	All Organisms → cellular organisms → Bacteria → Acidobacteria	820	Open in IMG/M
3300005842\|Ga0068858_100869863	All Organisms → cellular organisms → Bacteria → Acidobacteria	881	Open in IMG/M
3300005842\|Ga0068858_102251974	All Organisms → cellular organisms → Bacteria → Acidobacteria	539	Open in IMG/M
3300005843\|Ga0068860_102055827	All Organisms → cellular organisms → Bacteria → Acidobacteria	593	Open in IMG/M
3300005843\|Ga0068860_102801158	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300006806\|Ga0079220_10074534	All Organisms → cellular organisms → Bacteria	1683	Open in IMG/M
3300006845\|Ga0075421_100094390	All Organisms → cellular organisms → Bacteria	3767	Open in IMG/M
3300006871\|Ga0075434_100085451	All Organisms → cellular organisms → Bacteria	3154	Open in IMG/M
3300006904\|Ga0075424_100011259	All Organisms → cellular organisms → Bacteria → Acidobacteria	8885	Open in IMG/M
3300006954\|Ga0079219_12174244	Not Available	533	Open in IMG/M
3300009098\|Ga0105245_10715407	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1035	Open in IMG/M
3300009098\|Ga0105245_13120736	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300009098\|Ga0105245_13246392	Not Available	504	Open in IMG/M
3300009101\|Ga0105247_10201921	All Organisms → cellular organisms → Bacteria	1336	Open in IMG/M
3300009101\|Ga0105247_11693915	All Organisms → cellular organisms → Bacteria → Acidobacteria	522	Open in IMG/M
3300009147\|Ga0114129_11862987	All Organisms → cellular organisms → Bacteria → Proteobacteria	730	Open in IMG/M
3300009148\|Ga0105243_11040668	All Organisms → cellular organisms → Bacteria → Acidobacteria	824	Open in IMG/M
3300009162\|Ga0075423_10248721	All Organisms → cellular organisms → Bacteria	1862	Open in IMG/M
3300009174\|Ga0105241_10679304	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300009174\|Ga0105241_11052163	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	764	Open in IMG/M
3300009177\|Ga0105248_10766326	All Organisms → cellular organisms → Bacteria → Acidobacteria	1089	Open in IMG/M
3300009177\|Ga0105248_10809962	Not Available	1057	Open in IMG/M
3300009177\|Ga0105248_11040516	All Organisms → cellular organisms → Bacteria → Acidobacteria	925	Open in IMG/M
3300009545\|Ga0105237_10918240	Not Available	882	Open in IMG/M
3300010042\|Ga0126314_10453348	All Organisms → cellular organisms → Bacteria → Acidobacteria	928	Open in IMG/M
3300010397\|Ga0134124_10512978	All Organisms → cellular organisms → Bacteria → Acidobacteria	1161	Open in IMG/M
3300010397\|Ga0134124_11321778	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	744	Open in IMG/M
3300010397\|Ga0134124_11424985	Not Available	719	Open in IMG/M
3300010399\|Ga0134127_11281999	All Organisms → cellular organisms → Bacteria → Acidobacteria	801	Open in IMG/M
3300010399\|Ga0134127_12565700	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
3300010400\|Ga0134122_12924484	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300010403\|Ga0134123_10077386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas mali	2580	Open in IMG/M
3300011119\|Ga0105246_12578132	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300012896\|Ga0157303_10071096	All Organisms → cellular organisms → Bacteria → Acidobacteria	773	Open in IMG/M
3300012899\|Ga0157299_10273841	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300012912\|Ga0157306_10423981	Not Available	527	Open in IMG/M
3300012957\|Ga0164303_10536695	All Organisms → cellular organisms → Bacteria → Acidobacteria	757	Open in IMG/M
3300013102\|Ga0157371_10855363	All Organisms → cellular organisms → Bacteria → Acidobacteria	688	Open in IMG/M
3300013297\|Ga0157378_12757896	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300014326\|Ga0157380_10109505	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2318	Open in IMG/M
3300014326\|Ga0157380_11252869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	787	Open in IMG/M
3300014326\|Ga0157380_13332720	Not Available	514	Open in IMG/M
3300015371\|Ga0132258_11861324	All Organisms → cellular organisms → Bacteria → Acidobacteria	1516	Open in IMG/M
3300015372\|Ga0132256_102325767	All Organisms → cellular organisms → Bacteria → Acidobacteria	639	Open in IMG/M
3300015374\|Ga0132255_105851041	Not Available	520	Open in IMG/M
3300019362\|Ga0173479_10220079	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	815	Open in IMG/M
3300021445\|Ga0182009_10317285	All Organisms → cellular organisms → Bacteria → Acidobacteria	789	Open in IMG/M
3300025900\|Ga0207710_10042147	All Organisms → cellular organisms → Bacteria → Acidobacteria	2026	Open in IMG/M
3300025900\|Ga0207710_10509611	Not Available	625	Open in IMG/M
3300025907\|Ga0207645_10681599	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300025908\|Ga0207643_11103709	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300025914\|Ga0207671_10692671	All Organisms → cellular organisms → Bacteria → Acidobacteria	811	Open in IMG/M
3300025914\|Ga0207671_11459986	Not Available	529	Open in IMG/M
3300025921\|Ga0207652_10504779	All Organisms → cellular organisms → Bacteria → Acidobacteria	1089	Open in IMG/M
3300025926\|Ga0207659_11837612	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300025930\|Ga0207701_11049368	All Organisms → cellular organisms → Bacteria → Acidobacteria	677	Open in IMG/M
3300025932\|Ga0207690_11239077	All Organisms → cellular organisms → Bacteria → Acidobacteria	623	Open in IMG/M
3300025935\|Ga0207709_10511188	All Organisms → cellular organisms → Bacteria → Acidobacteria	939	Open in IMG/M
3300025938\|Ga0207704_11202567	All Organisms → cellular organisms → Bacteria → Acidobacteria	646	Open in IMG/M
3300025940\|Ga0207691_11601374	Not Available	530	Open in IMG/M
3300026035\|Ga0207703_10058317	All Organisms → cellular organisms → Bacteria	3151	Open in IMG/M
3300026035\|Ga0207703_11411826	Not Available	670	Open in IMG/M
3300026075\|Ga0207708_10952101	All Organisms → cellular organisms → Bacteria → Acidobacteria	745	Open in IMG/M
3300026088\|Ga0207641_10322894	All Organisms → cellular organisms → Bacteria	1464	Open in IMG/M
3300028379\|Ga0268266_11964386	All Organisms → cellular organisms → Bacteria → Acidobacteria	559	Open in IMG/M
3300031740\|Ga0307468_100719851	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	838	Open in IMG/M
3300031911\|Ga0307412_10110285	All Organisms → cellular organisms → Bacteria → Acidobacteria	1963	Open in IMG/M
3300032211\|Ga0310896_10797921	All Organisms → cellular organisms → Bacteria → Acidobacteria	541	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	59.48%
Environmental	Environmental	39.66%
Engineered	Engineered	0.86%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	59.48%
Terrestrial	Environmental → Terrestrial	39.66%
Solid Waste	Engineered → Solid Waste	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	39.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere	34.48%
Rhizoplane	Host-Associated → Plants → Rhizoplane	25.00%
Grass	Engineered → Solid Waste → Grass	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	25.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	24.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	21.55%
Loam	Environmental → Terrestrial → Soil → Loam	15.52%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.59%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.86%
Composting	Engineered → Solid Waste → Grass → Composting	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	25.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	21.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.52%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.59%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.86%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.86%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	13.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.48%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	6.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.03%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	6.03%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.31%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.31%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.45%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.72%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.86%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.86%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.86%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4PV_02674260	2170459015	Switchgrass, Maize And Mischanthus Litter	TVILVLVSIGVWHTVSKIWAAVKLHTDATDDQMLGKRWSKRQAILFIALAAVGCGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLIIDAGHSLSQRIDI
JGIcombinedJ43975_100526961	3300002899	Soil	IGVWHTVSKIWTAIKLHADDDDRTIATDDQIIGKRWSRRQALLFIALAAIGCGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLIDTVYAVSQRIDI*
Ga0062593_1027927662	3300004114	Soil	IWTAVKLHTDDHRIVATEDQVLAKRWSRRQAILLIALSAIGCALLGTFFGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLLDAGHALSQRIDI*
Ga0062590_1013250751	3300004157	Soil	VSKIWTAIKLHTDDDRTLATDQMVGKRWSRRQAIVVIALAAIGCGLLGTLIGMSLSDSLLSAMPTFFDPSIRLELLLYPWIIVLLMDAGHSLSQRIDI*
Ga0062590_1016181332	3300004157	Soil	IWTAIKLHTDDDRIVATDRVLAKRWTRRQAILFIALATIGCGLLGTLIGMSLSDSLLSAMPMFFDPSIRLELLLYPWIMVLLIDAVYSLGQRIDI*
Ga0062590_1021091932	3300004157	Soil	WRSSGLTGRTVILVLVSIGVWHTVSKIWSAIKLHTVDSTVATDDQMLIKRWSRRQAILFIALAAIGCGLLGTLIGMSFSDSLLSAMPMFFDPSLRLELLLYPWIMVLLIDGVYLLSQRIDI*
Ga0062590_1028773091	3300004157	Soil	VILVLVSIGVWHTLSKIWAAIKLHTDDDRIVATDDQVHAKRWSRRQAILCIALAAIGCGLLGTLIGMSLSDSLLSAMPMFFDPTIRVELLLYPWIMVLLLDAGHSLSQRIDI*
Ga0062590_1029030251	3300004157	Soil	AIKLHTDDDRIVATDDQVLAKRWSRRQAILFIALAAIGCGLLGTLIGMSLSDSLLSAMPMFFDPSIRLELLFYPWIMVLLLDTGHSLVQRIDI*
Ga0062591_1027099641	3300004643	Soil	VLVSIGVWHTLSKIWVAIKLHTDDDPIVATDDQVLTKHWGRRQAILSIALAAIGCGLLGTLIGMSLSDSLLSAMPMFFDPSIRLELLFYPWIMVLLLDTGHSLVQRIDI*
Ga0065704_105328951	3300005289	Switchgrass Rhizosphere	VWHTVSKIWSAVKLHADDDRTVATDDRMLAKRWSRRQAILFIALAAIGCGLLGTLIGMSFSDSLLSAMPMFFDPSLRLELLLYPWIMVLLIDAVYSLSQRIDI*
Ga0065707_105222932	3300005295	Switchgrass Rhizosphere	FPIVAFLFAAFFVPLVRPHLWRSSGWTGRIVILILVSVGVWHTVSKIWAAIKLHTDEDRTVGKRWSRRQAVLMIVLAAIGCGLLGTLIGMSFSESLLSAMPMFFDPSIRLELLLYPWIVVLLMDAGHSVSQRIDI*
Ga0068869_1008882432	3300005334	Miscanthus Rhizosphere	LWRSSGWTGRIVILILVSVGVWHTVSKIWAAIKLHTDEDRTVGKRWSRRQAVLMIVLAAIGCGLLGTLIGMSFSESLLSAMPMFFDPSIRLELLLYPWIVVLLMDAGHSVSQRIDI*
Ga0068869_1014837831	3300005334	Miscanthus Rhizosphere	AFFVPLVRPHFWRSSGLTGRTVILVLVSIGIWHTVSKIWSAVKLHTDGDRTAAADEKMLAKRWTRRQAVLFIALTAIGCGLLGTLIGLSFSDSLLSAMPMFFDPSLSLELLLYPWIMVLLIDAVYSLSQRIDI*
Ga0070682_1008867421	3300005337	Corn Rhizosphere	AIKLHADYDRTIANDDQILAKRWSRRQALLFIALAAIGCGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLLDAGHSLSQRIDI*
Ga0070689_1019727061	3300005340	Switchgrass Rhizosphere	ILLCTGVWHTLSKIWTAVKLHTDDDRIVTTNDQVPAKRWSRRQAILYIALAAIGCGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLIDTVFAVSQRIDI*
Ga0070692_102292042	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	TGRTIILILLSIGVWHTFAKIWTAVKLHTDDHRIVATEDQVLAKRWSRRQAILLIALSAIGCALLGTFFGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLLDAGHALSQRIDI*
Ga0070692_102994051	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	GRIVILILVSVGVWHTVSKIWAAIKLHTDEDRTVGKRWSRRQAVLMIVLAAIGCGLLGTLIGMSFSESLLSAMPMFFDPSIRLELLFYPWIMVLLIDAVYSLSQRIDL*
Ga0070692_113262281	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	GVWHTVSKIWAAIKLYTHDGPTVATDDPMLAKRWSRRQAILLVMFAAIGCGLLGTLIGISFSDSLLSAMPMFFDPSIRLELLFYPWIIVLVIDAVHLLSQRLDI*
Ga0070673_1001692311	3300005364	Switchgrass Rhizosphere	WRSSGWTGRTVILILLCTGVWHTLSKIWTAVKLHTDDDRIVATDDQVLANRWSRRQAILLIAFSAIGCGLLGTLIGMSFSDSLLSAMPMFFDASIRPELLFYPWIMVLLLDAGHALSQRIDI*
Ga0070673_1003732021	3300005364	Switchgrass Rhizosphere	VSKIWAAIKLHTDDARTVATDDQMLPKRWSRRQAILFIVLAAIGCGLVGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLIDAVYSVSQKIDI*
Ga0070688_1003546421	3300005365	Switchgrass Rhizosphere	VILVLVSIGVWHTLSKIWVAIKLRTDDDPIVATDDQVLTKHWGRRQAILSIALAAIGCGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLLDAGHSLSQRIDI*
Ga0070688_1007504701	3300005365	Switchgrass Rhizosphere	IVAFLFAMFFVPLVRPHFWHSSGWVGRTVILVLVSLGVWHTVSHIWRAIKLHTHDGPTDDPMPAKRWSRRQAILLILLAASGCGLLGTLIGISFSDSLLSAMPMFFDRSIRLELLFYPWIMVLVIDGVLSLSQRLDI*
Ga0070705_1000750603	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	SKIWTAIKLHTHDDRTVGTKRWSRRQALLFIALAAIGCGLLGTLIGMSLSDSLLTAMPMFFDPSIRLELLLYPWIMVLLIDTVYSVSQRIDI*
Ga0070700_1005627311	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	AAFFVPLVRPHLWRSSGWTGRTIILILVSIGLWHTLSKIWAAVKLHTDRIVTTDDQVHAKRWSRRQAIMYIALAAIGCGLLGTLIGISLSDSLLSAMPMFFDPSIRLELLLYPWIMVLLLDAGHSLSQRIDI*
Ga0070694_1019207622	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VILILVSIGVWHTFSKISTAVSLHTDDARRVAPDEPMLAKRWSRRQAILLIALAAIACGLVGTLIGMSFSDSLLSAMPMFFDPSIRLELLFYPWIMVLFIDTLHSLSQRIDI*
Ga0070663_1021368391	3300005455	Corn Rhizosphere	LHTDDDRIVETNDQVPAKRWSRRQAILYIALAAIGCGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLIDAVYSLGQRIDI*
Ga0070678_1016619511	3300005456	Miscanthus Rhizosphere	GLWHTVSKISTAIKLHTDNDQTRSSEPGEQILGKSWSRRRALLCIGLAAIGCGLLGTLIGMTLSDSLLIAMPMFFDPAIRLELLLYPWIMVLLVDACHSLSQRLDI*
Ga0068867_1003521602	3300005459	Miscanthus Rhizosphere	HLWRSSGWTGRTVILVLVSVGVWLTLSKIWAAIKLHTDDDRIVATDDQVLAKRWSRRQAILFIALAAIGCGLLGTLIGMSLSDSLLSAMPMFFDPSLRLELLFYPWILVLLLDAVHSLSQRIDI*
Ga0070698_1000099311	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	WSAIKLHTDDRTVATGDQMFPKRWSRRQAIFFIALAAIGCGLLGTLIGMSFSESLLSAMPMFFDPSLRLELLLYPWIMVLLIDSVYSLSQRIDI*
Ga0070699_1005171822	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	GRTVILVLVSIGVWHTVTKIWTAIKLHTDDDRTIATDDQMFAKRWSRRQALLFIALGAIACGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLIDTVYAVSQRIDI*
Ga0070684_1021159111	3300005535	Corn Rhizosphere	AFFVPLVRPHLWRSSGWTGRTVILVLVSFGVWHTLSKIWTAIKLHTDDDRIVAADDQVFAKRWSRRQAILFIALAAIGCGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLIDAGHSLSQRIDI*
Ga0070672_1020407322	3300005543	Miscanthus Rhizosphere	TGRTVILILVSVGVWHTVSKIWGAIKLHTEDARMVATNDLAPTKHWSRRQAILFIALAAIGCGLAGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLIDAVYSLGQRIDI*
Ga0070686_1005082731	3300005544	Switchgrass Rhizosphere	VILLLVSIGVWHTVSKIWTAIKLHADYDRTDATDDQMLAKRWSRRQALLFIALAAIGCGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLIDTVYAVSQRIDV*
Ga0070696_1018148982	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VSIGVWHTVSKIWAAIKLYTHDGPTVATDDPMLAKRWSRRQAILLVMFAAIGCGLLGTLIGISFSDSLLSAMPMFFDPSIRLELLFYPWIIVLVIDAVHLLSQRLDI*
Ga0070693_1004668941	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	AFLVPLVRPHLWRSSGWTGRTIILILVSIGLWHTLSKIWAAVKLHTDRIVATDDQVHAKRWSRRQAIMYIALAAIGCGLLGTLIGISLSDSLLSAMPMFFDPSIRLELLLYPWIMVLLLDAGHSLSQRIDI*
Ga0070665_1026414961	3300005548	Switchgrass Rhizosphere	VLVSVGVWHTVSKIWAAIKLHTDDARTGATDDPMLAKRWSRRQAILFIVLAAIGCGLVGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVFLIDAVYSVSQKIDI*
Ga0068855_1007093363	3300005563	Corn Rhizosphere	RPHLWRSSGWTGRTVILLLVSIGVWHTVSKIWTAIKLHADDDRTVATDDQMLAKRWSRRQALFFIALAAMGCGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLMDAGHSLSQRIDI*
Ga0068857_1001736941	3300005577	Corn Rhizosphere	TVILLLVSIGVWHTVSKIWTAIKLHTDDDRTVATDDHMQPKRWSRRQALLFIALAAIGCGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLFYPWIMVLLIDTVYSVSQRIDI*
Ga0068854_1022514401	3300005578	Corn Rhizosphere	RSSGWTGRTVILLLVSIGVWHTVSRIWTAIKLHADDDRTVATDDQMLAKRWSRRQALFFIALAAMGCGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLIDTVYSVSQRIDI*
Ga0068859_1011061552	3300005617	Switchgrass Rhizosphere	IVAFLFAAFFVPLVRPHLWRSCGWTGRAVILVVVSISVWHTVSKIWTAIKLHTHDDRTVGTKRWSRRQALLFIALAAIGCGLLGTLIGMSLSDSLLTAMPMFFDPSIRLELLLYPWIMVLLIDTVYSVSQRIDI*
Ga0068859_1015420092	3300005617	Switchgrass Rhizosphere	FLFAAFFVPLVRPHLWRSSGWTARTVILVLVSVGVWHTVSKIWAAIKLHTDDARTVATDDLAPIKHWSRRQAILFIALAGIGCGLAGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLIDAVYSLGQRIDI*
Ga0068859_1019554721	3300005617	Switchgrass Rhizosphere	GVWHTLSKIWTAVKLHTDDDRIVATDDQVLANRWSRRQAILLIAFSAIGCGLLGTLIGMSFSDSLLSAMPMFFDASIRPELLFYPWIMVLLLDAGHALSQRIDI*
Ga0068859_1030149151	3300005617	Switchgrass Rhizosphere	LLRPHFWRSSGWPGRIVILILVSVGVWHTVSRIWTIIKLHTDDDRRASTVPDEQTLANGWTRRQAFLFIGLAVTGCGLVGTLLGMSLSDSLLIAMPMFFDPAIRLELLLYPWIMVLLIDAFHSLSQRLDI*
Ga0068864_1001709703	3300005618	Switchgrass Rhizosphere	KLHTVDSTVATDDQMLIKRWSRRQAILFIALAAIGCGLLGTLIGMSFSDSLLSAMPMFFDPSLRLELLLYPWIMVLLIDGVYLLSQRIDI*
Ga0068864_1004034713	3300005618	Switchgrass Rhizosphere	ILVLVSIGVWHTVSKIWAAIKLHTDEARTVSTDDQMPAKRWTRRQAILVIALAAIGCGLIGTLIGMSFTESLLSAMPMFFDPSIRLELLLYPWIMVLFIDAVYSLSQRIDI*
Ga0068864_1019220781	3300005618	Switchgrass Rhizosphere	GRTVILVLVSLGVWHTVSHIWRAIKLHTHDGPTDDPMPAKRWSRRQAILLILLAASGCGLLGTLIGISFSDSLLSAMPMFFDRSIRLELLFYPWIMVLVIDGVLSLSQRLDI*
Ga0068863_1006672262	3300005841	Switchgrass Rhizosphere	SSGWMGRTVIFALVSIGVWHTLSKLWTAVKLHTDDQMLAKRWSRRQAILLIALSAIGCALLGTFFGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLLDAGHALSQRIDI*
Ga0068863_1010471862	3300005841	Switchgrass Rhizosphere	HFWRSSGWTARAVILVLVSIGIWHTVSKIWAAIKLHTDDDRMVVKRWSRRQAILIIVLAAIGCGLLGTLIGMSLSESLLSAMPMFFDPSIRPELLLYPWIMVLLIDALYSVSQRIDL*
Ga0068858_1008698632	3300005842	Switchgrass Rhizosphere	VILLLVSIGVWHTVSRIWTAIKLHADDDRTVATDDQMLAKRWSRRQALFFIALAAMGCGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLIDTVYSVSQRIDI*
Ga0068858_1022519741	3300005842	Switchgrass Rhizosphere	LVSIGVWHTVSKIWSAVKLHTVDSTVATDDPMLIKRWSRRQAILFIALAAIGCGLLGTLIGMSFSDSLLSAMPMFFDPSLRLELLLYPWIMVLLIDGVYLLSQRIDI*
Ga0068860_1020558271	3300005843	Switchgrass Rhizosphere	WHTLSKIWAAIKLHTDDDRIVTTDDQVLAKHWSRRQAILYIALAAIGCGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLLDAVYSLSQRIDL*
Ga0068860_1028011581	3300005843	Switchgrass Rhizosphere	GIWHTLSKIWAAVKLHTDDDRIVETNDQVPAKRWSRRQAILYIALAAIGCGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLIDAVYSVSQKIDI*
Ga0079220_100745343	3300006806	Agricultural Soil	LWHSAGWIERTVIVVLAGIGIWHTFSKIRAAIKLHTDDTQAKATDQIAANRWSRGQAVLFIALGTLGCALGGTLIGLSFSESLLSAMPMFFDPSIRLELLLYPWIMVLLIDALYAVSQRIDI*
Ga0075421_1000943906	3300006845	Populus Rhizosphere	AIKLHTDEDRMVVKRWSRRQAILIIVLAAIGCGLLGTLIGMSFSESLLSAMPMFFDPSLRLELLLYPWIMVLLIDALHSVSQRIDI*
Ga0075434_1000854513	3300006871	Populus Rhizosphere	VSIGVWHTLSKIWTAIKLHTDDDRVVATTKRWTRRQAILFIALAAIGCGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLLDAGHSLSQRLDI*
Ga0075424_10001125910	3300006904	Populus Rhizosphere	TLSKIWTAVKLHTDDGQGVATDDQVITKRWSRRQAILFIALAAIGCGLLGTFIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLLDAGHSVTQRIDI*
Ga0079219_121742441	3300006954	Agricultural Soil	VILVLVGVGVWHTLSKIWAAIKLHTNATDDEMVAKRWSRRQALLFITLAAIGCALVGTLIGMSFSDSLLTAMPMFFDPSIRLELLLYPWIIVLLIDAGHSLSQRIDI*
Ga0105245_107154071	3300009098	Miscanthus Rhizosphere	GVWHTVSKIWAAVNLHVDAARTVATDDQVPAKRWSRRQAILFIALAAIGCGLVGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLVDAVYSLSQRIDI*
Ga0105245_131207362	3300009098	Miscanthus Rhizosphere	AFFVPLIRPHFWRSSGWTARAVILVLVSIGIWHTVSKIWTAIKLHTDDDRTVATDDEMLAKRWSRRQAILYIALAAIGCGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLLDAVYSLSQRIDL*
Ga0105245_132463921	3300009098	Miscanthus Rhizosphere	KLYTDDGPTVATDDPKRWSRRQAILLILLAAIGCGLLGTLIGMSFSESLLSAMPMFFDPSIRLELLFYPWIMVLLIDAVHSLSQRLDI*
Ga0105247_102019212	3300009101	Switchgrass Rhizosphere	VAFLFAAFFVPLVRPHLWRSSGWTARTVILVLVSVGVWHTVSKIWAAIKLHTDDARTVATDDLAPIKHWSRRQAILFIALAGIGCGLAGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLIDAVYSLGQRIDL*
Ga0105247_116939152	3300009101	Switchgrass Rhizosphere	VSTGVWHTLSKIWVAIKLHTADDRLAATDDQVLVKRWSRRQAILLIALSTIGCGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLLDAVHSLSQKIDV*
Ga0114129_118629872	3300009147	Populus Rhizosphere	VSKIWAAIKLHTYDGRMAETVMDDQTTAKHWSRRQAILFIAIAAIGCGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLIDALHSLSQRMDI*
Ga0105243_110406681	3300009148	Miscanthus Rhizosphere	LHADDDRTVATDDQMLAKRWSRRQALLFIALAAMGCGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLIDTVYSVSQRIDI*
Ga0075423_102487213	3300009162	Populus Rhizosphere	KLHTDDDRVAATTKRWTRRQAILFIALAAIGCGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLLDAGHSLSQRLDI*
Ga0105241_106793042	3300009174	Corn Rhizosphere	AIKLHTDEARTVSTDDQMPAKRWTRRQAILVIALAAIGCGLIGTLIGMSFTESLLSAMPMFFDPSIRLELLLYPWIMVLFIDAVYSLSQRIDI*
Ga0105241_110521631	3300009174	Corn Rhizosphere	LWHSSGWTGRTVMLVLVIVGVWHTVTKIWAAIKLHTDDDRSGEQVLAKRWSRRQAVLFIALAAIGCGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLIDALYSLSQRIDI
Ga0105248_107663262	3300009177	Switchgrass Rhizosphere	ILVLVSIGVWHTVSKIWGGIKLCTDDGRTVATDDPMLAKRWSRRQAILLILLAAIGCGLLGTLIGMSFSESLLSAMPMFFDPSIRLELLFYPWIMVLLIDAVHSLSQRLDI*
Ga0105248_108099621	3300009177	Switchgrass Rhizosphere	IKLYTDDDRIVAQVLAKRWSRRQAILFIALAAIGCGLAGTLIGISLSDSLLSAMPMFFDPSLRLELLFYPWIMVLLLDAGHSLSQRIDI*
Ga0105248_110405161	3300009177	Switchgrass Rhizosphere	ILLLVSIGVWHTVSRIWTAIKLHADDDRTVATDDQMLAKRWSRRQALLFIALAAIGCGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLIDTVYAVSQRIDI*
Ga0105237_109182401	3300009545	Corn Rhizosphere	LVRPHFWLSSGWIGRTVILVLVSIGVWHTVSKIWGGIKLYTDDGPTVATEDPMLAKRWSRRQAILLILLAAIGCGLLGTLIGMSFSESLLSAMPMFFDPSIRLELLFYPWIMVLLIDAVLSLSQRLDI*
Ga0126314_104533481	3300010042	Serpentine Soil	SVILVLVTIGVWHTASKIWAAIKLHTDEAPTVSTDDQMPPKRWSRRQAILVIAFAAIGCGLIGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLIDAVHSISQRIDI*
Ga0134124_105129781	3300010397	Terrestrial Soil	VKLHTDDHRIVATEDQVFAKRWSRRQAILLIALSAIGCALLGTFFGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLLDAGHALSQRIDI*
Ga0134124_113217782	3300010397	Terrestrial Soil	WHTVSKIWAAIKLHTDEDRTVGKRWSRRQAVLMIVLAAIGCGLLGTLIGMSFSESLLSAMPMFFDPSIRLELLLYPWIVVLLMDAGHSVSQRIDI*
Ga0134124_114249851	3300010397	Terrestrial Soil	VFPIVAFLFAMFFVPLVRPHFWLSSGWIGRTVILVLVSTGVWHTVSKIWRGIKLYTDDGPSVATDDPMLAKRWSRRQAILLILLAAIGCGLLGTLIGMSFSESLLSAMPMFFDPSIRLELLFYPWIMVLLIDAVLSLSQRLDI*
Ga0134127_112819991	3300010399	Terrestrial Soil	VFPIVAFLFAAFFVPLVRPHLWRSSGWTGRTIILILVSIGLWHTLSKIWAAVKLHTDRIVATDDQVHAKRWSRRQAIMYIALAAIGCGLLGTLIGISLSDSLLSAMPMFFDPSIRLELLLYPWIMVLLLDAGHSLSQRIDI*
Ga0134127_125657002	3300010399	Terrestrial Soil	VIIGVWHTLSKIWTAIKLHTDAANEQVLAKRWSRRQAILLIMLAAIGCGLLGTFIGTSFSDSLLSAMPMFFDPSIRPELLLYPWIMVLLLDAGHSLSQRIDI*
Ga0134122_129244841	3300010400	Terrestrial Soil	MGRAVILVLVSIGVWHTVSKIWAGIKLHTDDDRTVATDDQMLPKRWSRRQALLFIALAAIGCGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLIDTVYSVSQRIDI*
Ga0134123_100773865	3300010403	Terrestrial Soil	WHSSGWIGRTVILALVSIGVWHTVSKIWAAIKLYTHDGPTVATDDPMLAKRWSRRQAILLVMFAAIGCGLLGTLIGISFSDSLLSAMPMFFDPSIRLELLFYPWIIVLVIDAVHLLSQRLDI*
Ga0105246_125781321	3300011119	Miscanthus Rhizosphere	SKISTAIKLHTDNDQTRSSEPGEPIIGKRWSRRRALLCIGLAVTGCGLLGTLIGTTLSDSLLIAMPMFFDPAIRLELVLYPWIIVLFIDACHSLSQRLDI*
Ga0157303_100710961	3300012896	Soil	LFLVSIGVWHTLSKIWAAIKLHTYDDRIVATNDHVLTKGWSRRQAILFIALAAIGCGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLFYPWIMVLFIDTLHSLSQRIDI*
Ga0157299_102738411	3300012899	Soil	VSIGVWHTLSKIWTAVKLHTDNGQGVATDDQVIAKRWSRRQAILFIALAAIGCGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLIDAVYSLGQRIDI*
Ga0157306_104239811	3300012912	Soil	TVSKIWGAIKLHTEDARMVATNDLAPAKHWSRRQAILFIALAAIGCGLAGTLIGMSFSDSLLSAMPMFFDPSLRLELLLYPWIMVLLIDGVYLLSQRIDI*
Ga0164303_105366952	3300012957	Soil	MLVLVIIGVWHTVSKIWAAIKLHTDDARTVTTDDPMLAKRWSRRQAILFIVLAAIGCGLVGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLIDAVYSVSQRIDI*
Ga0157371_108553631	3300013102	Corn Rhizosphere	SGWTGRTVILVLVSIGVWHTVSKIWTAIKLHTDDDGTVATDDQMLAKRWSRRQAILYIALAAIGCGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLIDAVYSVSQKIDI*
Ga0157378_127578961	3300013297	Miscanthus Rhizosphere	IKLHTDDTRAGATDDPILAKRWSRRQAILFIALAAIGCGLAGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLLDAGHALSQRIDI*
Ga0163162_128430992	3300013306	Switchgrass Rhizosphere	DDRIVATDDQVLAKRWSRRQAILLIALSAIGCGLLGTLIGMSFSDSLLSAMPMFFEPSIRPELLLYPWIMVLLLDAGHALSQRIDI*
Ga0157380_101095052	3300014326	Switchgrass Rhizosphere	LHTDDDRIATDDQVLAKRWSRRQAILFIALAAIGCGLLGTLIGMSLSDSLLSAMPMFFDPSLRLELLFYPWILVLLLDAVHSLSQRIDI*
Ga0157380_112528691	3300014326	Switchgrass Rhizosphere	SSGWTGRTVILVLVSVGVWHTVSKIWAAIKLHTEDARMVATNDLAPTKHWSRRQAILFIALAAIGCGLAGTLIGMSFSDSLLSAMPMFFDPSISLELLLYPWIMVLLIDAVYSLGQRIDL
Ga0157380_133327201	3300014326	Switchgrass Rhizosphere	GVWHTFAKIWTAVKLHTDDHRIVATEDQVLAKGWSRRQAILLIALSAIGCALLGTFFGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLLDVGHALSQRIDI*
Ga0132258_118613241	3300015371	Arabidopsis Rhizosphere	SKIWTAVKLHTDDGQVVASEDQVIAKRWSRRQAILFIALAAIGCGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLLDAGHSVTQRIDI*
Ga0132256_1023257671	3300015372	Arabidopsis Rhizosphere	LSKIWAAVKLHTEVVASDDQVIAKRWSRRQAIFFIALTAIGCGLLGTFIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLLDAGHSVTQRIDI*
Ga0132255_1058510412	3300015374	Arabidopsis Rhizosphere	GVWHTLSKIWAAVKLHTDDDRFLATDDQVGSRHWSRRQGILFIALAAIACGLLGTLIGISLSDSLLSAMPMFFDPSIRLELLLYPWIMVLLLDAGHSLSQRIDL*
Ga0173479_102200792	3300019362	Soil	VAAFFVPLVRPHFWRSSGWPGRIVILMLVGLGLWHTVSKISSVIKPHTDDDRTRLSEPVEQMLGKGWSRHRALLCIGLAATVCGLLGTLIGISLSDSLLSAMPMFFDPSIRLELLLYPWIMVLLIDACYSLGQRIDI
Ga0182009_103172852	3300021445	Soil	WAAIKLYTDDDQTAATDNRIFEKRWSRRQAILFIALAAITCGLMGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLIDTGYALGQRIDI
Ga0207710_100421472	3300025900	Switchgrass Rhizosphere	LHTDDDRIVATDDQVLEKHWSRRQAILFIALAAIGCGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLLDAGHSLSQRIDI
Ga0207710_105096111	3300025900	Switchgrass Rhizosphere	LSKLCTAVKLHTDDDRIVAKDDQVHANRWSRRQAILLIAFSAIGCGLLGTLIGMSFSDSLLSAMPMFFEPSIRPELLFYPWIMVLLLDAGHALSQRIDI
Ga0207645_106815991	3300025907	Miscanthus Rhizosphere	FFVPLVRPHFWRSSGWTGRTVILVLLCTGVWHTLSKIWTAVKLHTDDARTGATDDPMLAKRWSRRQAILFIVLAAIGCGLVGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLIDACYSLGQRIDI
Ga0207643_111037091	3300025908	Miscanthus Rhizosphere	AFLFAAFFVPLVRPHLWHSSGWIGRTVMLVLVIIGVWHTVSKIWAAIKLHTDDARTVTTDDQMLAKRWSRRQAVLFIALAAIGCGLLGTLIGTSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLLDAGYSLSQRIDL
Ga0207671_106926711	3300025914	Corn Rhizosphere	ILVLVSIGVWHTVSKIWTAIKLHTDDDRTVATDDEMLAKRWSRRQAILYITLAAIGCGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLLDAVYSLSQRIDL
Ga0207671_114599861	3300025914	Corn Rhizosphere	LHTDRIVATDDQVHAKRWSRRQAIMYIALAAIGCGLLGTLIGISLSDSLLSAMPMFFDPSIRLELLLYPWIMVLLLDAGHSLSQRIDI
Ga0207652_105047792	3300025921	Corn Rhizosphere	VILVLVSIGVWHTVSKIWTAIKLHTDDDGTVATDDQMLAKRWSRRQAILYIALAAIGCGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLLDAVYSLSQRIDL
Ga0207659_118376121	3300025926	Miscanthus Rhizosphere	SKIWATIKLHTDDARMVATDDLAPTKHWSRRQAILFIALAAIGCGLLGTLIGMSFSDSLLSAMPMFFDPSISLELLLYPWIMVLLIDAVYSLGQRIDL
Ga0207701_110493682	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	HFWRSSGWTGRTVILVLVSTGVWHTLSKIWVAIKLHTADDRLAATDDQVLAKRWSRRQAILLIALSAIGCGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLLDAGHSLSQRIDI
Ga0207690_112390771	3300025932	Corn Rhizosphere	LFAAFFVPLVRPHLWRSCGWTGRAVILVVVSISVWHTVSKIWGGIKLYTDDGPTVATDDPMLAKRWSRRQAILLILLAAIGCGLLGTLIGMSFSESLLSAMPMFFDPSIRLELLLYPWIMVLLLDAVYSLSQRIDL
Ga0207709_105111881	3300025935	Miscanthus Rhizosphere	SSGWTGRTVILLLVSIGVWHTVSKIWTAIKLHADYDRTVATDDQMLAKRWSRRQALLFIALAAIGCGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLIDTVYAVSQRIDI
Ga0207704_112025671	3300025938	Miscanthus Rhizosphere	QSVIPVVAFLFAAFFVPLVRPHLWRSSGWTARTVILVLVSVGVWHTVSKIWAAIKLHTDDARTVATDDLAPIKHWSRRQAILFIALAGIGCGLAGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLIDTVYAVSQRIDI
Ga0207691_116013741	3300025940	Miscanthus Rhizosphere	VWHTVSKIWAAIKLHTDDARTVATDDLAPIKHWSRRQAILFIALAGIGCGLAGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLIDAVYSLGQRIDI
Ga0207703_100583171	3300026035	Switchgrass Rhizosphere	ILLLVSIGVWHTVSRIWTAIKLHADDDRTVATDDQMLAKRWSRRQALFFIALAAMGCGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLIDTVYSVSQRIDI
Ga0207703_114118261	3300026035	Switchgrass Rhizosphere	ISTAIKLHTDNDQTRSSEPGEPIIGKRWSRRRALLCIGLAVTGCGLLGTLIGTTLSDSLLIAMPMFFDPAIRLELLLYPWIMVLLMDACHSLSQRIDI
Ga0207708_109521011	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	LVRPHLWRSSGWTGRTIILILVSIGLWHTLSKIWAAVKLHTDRIVTTDDQVHAKRWSRRQAIMYIALAAIGCGLLGTLIGISLSDSLLSAMPMFFDPSIRLELLLYPWIMVLLLDAGHSLSQRIDI
Ga0207641_103228943	3300026088	Switchgrass Rhizosphere	SVGVWHTISKIWAAIKLHTDDDRMVVKRWSRRQAILIIVLAAIGCGLLGTLIGMSLSESLLSAMPMFFDPSIRPELLLYPWIMVLLIDALYSVSQRIDL
Ga0268266_119643861	3300028379	Switchgrass Rhizosphere	VAFLFAAFFVPLVRPHLWHSSGWTGRTVILVLVSVGVWHTLSKIWTAIKLHTDDDRIVATDDQVLAKRWSRRQAVLFIALAAIGCGLLGTLIGMSFSDSLLSAMPMFFDPSIRLELLLYPWIMVLLLDAVYSLSQRIDL
Ga0307468_1007198511	3300031740	Hardwood Forest Soil	FSIGIWHTFSKIWAAIKVHTDDERTVATDDQMLAKRWSKRQATLFIALAAIGCGLLGTLIGISLSDSLLSAMPMFFDPSLRLELLLYPWIMVLLIDAVHSLSQKIDI
Ga0307412_101102851	3300031911	Rhizosphere	RSSGWTGRIVILILVSIGVWHTVSKIWSAVKLHADNDRMRWSRRQAVLIIALAAIGCGLLGTLIGMSFSESLLSAMPMFFDPSLRLELLLYPWIMVLLSDALYSVSQRIDI
Ga0310896_107979212	3300032211	Soil	TGRTVILVLVSIGVWHTVSKIWSAIKLHTDDDLTVATGEQMLVKRWGRRQAVLVIAVAAIGCGLLGTLIGMSFSESLLSAMPMFFDPSIRLELLLYPWIMVLLLDAGHSVTQRIDI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F078372

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences