NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F078464

Metagenome / Metatranscriptome Family F078464

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F078464
Family Type Metagenome / Metatranscriptome
Number of Sequences 116
Average Sequence Length 69 residues
Representative Sequence GIGEVVEGALATVTPGAFAPGAVVVRPPRIDVLALAPGTLEGTIFPPQRMNVGLTLVDVEELVDV
Number of Associated Samples 80
Number of Associated Scaffolds 116

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 27.83 %
% of genes near scaffold ends (potentially truncated) 48.28 %
% of genes from short scaffolds (< 2000 bps) 93.10 %
Associated GOLD sequencing projects 78
AlphaFold2 3D model prediction Yes
3D model pTM-score0.18

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (98.276 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(30.172 % of family members)
Environment Ontology (ENVO) Unclassified
(36.207 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(53.448 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 6.45%    β-sheet: 0.00%    Coil/Unstructured: 93.55%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.18
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 116 Family Scaffolds
PF12762DDE_Tnp_IS1595 8.62
PF13614AAA_31 1.72
PF02416TatA_B_E 1.72
PF13358DDE_3 1.72
PF13374TPR_10 0.86
PF00486Trans_reg_C 0.86
PF01656CbiA 0.86
PF00580UvrD-helicase 0.86
PF04471Mrr_cat 0.86
PF04255DUF433 0.86
PF01609DDE_Tnp_1 0.86
PF00239Resolvase 0.86
PF00296Bac_luciferase 0.86
PF04191PEMT 0.86
PF13424TPR_12 0.86
PF01381HTH_3 0.86
PF03633Glyco_hydro_65C 0.86
PF01610DDE_Tnp_ISL3 0.86

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 116 Family Scaffolds
COG1826Twin-arginine protein secretion pathway components TatA and TatBIntracellular trafficking, secretion, and vesicular transport [U] 1.72
COG2442Predicted antitoxin component of a toxin-antitoxin system, DUF433 familyDefense mechanisms [V] 0.86
COG2452Predicted site-specific integrase-resolvaseMobilome: prophages, transposons [X] 0.86
COG3039Transposase and inactivated derivatives, IS5 familyMobilome: prophages, transposons [X] 0.86
COG3293TransposaseMobilome: prophages, transposons [X] 0.86
COG3385IS4 transposase InsGMobilome: prophages, transposons [X] 0.86
COG3464TransposaseMobilome: prophages, transposons [X] 0.86
COG3973DNA helicase IVReplication, recombination and repair [L] 0.86
COG5421TransposaseMobilome: prophages, transposons [X] 0.86
COG5433Predicted transposase YbfD/YdcC associated with H repeatsMobilome: prophages, transposons [X] 0.86
COG5659SRSO17 transposaseMobilome: prophages, transposons [X] 0.86
COG0210Superfamily I DNA or RNA helicaseReplication, recombination and repair [L] 0.86
COG10743’-5’ helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)Replication, recombination and repair [L] 0.86
COG1554Phosphatase/phosphodiesterase/kojibiose phosphorylase YcjT/PafA/Npp1, AlkP superfamilyCarbohydrate transport and metabolism [G] 0.86
COG1961Site-specific DNA recombinase SpoIVCA/DNA invertase PinEReplication, recombination and repair [L] 0.86
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.86

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.28 %
UnclassifiedrootN/A1.72 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000955|JGI1027J12803_100243709All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria566Open in IMG/M
3300005181|Ga0066678_10790921All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria628Open in IMG/M
3300005289|Ga0065704_10236376All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria1028Open in IMG/M
3300005295|Ga0065707_10292486All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria1022Open in IMG/M
3300005332|Ga0066388_100676984All Organisms → cellular organisms → Bacteria1642Open in IMG/M
3300005332|Ga0066388_102507679All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria937Open in IMG/M
3300005332|Ga0066388_108260165All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria519Open in IMG/M
3300005347|Ga0070668_100628475All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria942Open in IMG/M
3300005445|Ga0070708_100338403All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria1418Open in IMG/M
3300005447|Ga0066689_10990161All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria518Open in IMG/M
3300005451|Ga0066681_10918882All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria524Open in IMG/M
3300005454|Ga0066687_10507925All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria713Open in IMG/M
3300005459|Ga0068867_101886104All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria563Open in IMG/M
3300005471|Ga0070698_100328246All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1461Open in IMG/M
3300005536|Ga0070697_100552427All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria1010Open in IMG/M
3300005545|Ga0070695_101751413All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria521Open in IMG/M
3300005586|Ga0066691_10550249All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300005764|Ga0066903_106321984All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria618Open in IMG/M
3300006049|Ga0075417_10708373All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria517Open in IMG/M
3300006796|Ga0066665_11395778All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria542Open in IMG/M
3300006844|Ga0075428_100245072All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria1933Open in IMG/M
3300006847|Ga0075431_100882641All Organisms → cellular organisms → Bacteria864Open in IMG/M
3300006853|Ga0075420_100185026All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria1821Open in IMG/M
3300006853|Ga0075420_101708833All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria539Open in IMG/M
3300006880|Ga0075429_100752383All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria854Open in IMG/M
3300006969|Ga0075419_10927219All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria630Open in IMG/M
3300006969|Ga0075419_10953911Not Available622Open in IMG/M
3300009038|Ga0099829_11200904All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria628Open in IMG/M
3300009038|Ga0099829_11772532All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria506Open in IMG/M
3300009089|Ga0099828_10123659All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae2263Open in IMG/M
3300009089|Ga0099828_11907339All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria521Open in IMG/M
3300009100|Ga0075418_10555615All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria1234Open in IMG/M
3300009100|Ga0075418_12793870All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria533Open in IMG/M
3300009162|Ga0075423_10279995All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria1748Open in IMG/M
3300009162|Ga0075423_12649585All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria548Open in IMG/M
3300009162|Ga0075423_13108952All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria509Open in IMG/M
3300009176|Ga0105242_12942149All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria527Open in IMG/M
3300009792|Ga0126374_10527678All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria857Open in IMG/M
3300009792|Ga0126374_11147995All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria619Open in IMG/M
3300009812|Ga0105067_1070088All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria590Open in IMG/M
3300009817|Ga0105062_1082692All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria620Open in IMG/M
3300009840|Ga0126313_10785317All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria774Open in IMG/M
3300010029|Ga0105074_1004447All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria2052Open in IMG/M
3300010038|Ga0126315_10227365All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria1132Open in IMG/M
3300010043|Ga0126380_11262400All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria641Open in IMG/M
3300010323|Ga0134086_10106317All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria996Open in IMG/M
3300010323|Ga0134086_10366800All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300010333|Ga0134080_10079488All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria1326Open in IMG/M
3300010358|Ga0126370_10165215All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium1632Open in IMG/M
3300010358|Ga0126370_12014726All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria564Open in IMG/M
3300010359|Ga0126376_11277730All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria753Open in IMG/M
3300010359|Ga0126376_11819481All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria647Open in IMG/M
3300010360|Ga0126372_10159119All Organisms → cellular organisms → Bacteria1819Open in IMG/M
3300010360|Ga0126372_10201612All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria1657Open in IMG/M
3300010360|Ga0126372_11922581All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria637Open in IMG/M
3300010362|Ga0126377_10918866All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria938Open in IMG/M
3300010362|Ga0126377_12054533All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria647Open in IMG/M
3300010366|Ga0126379_10354904All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria1498Open in IMG/M
3300010366|Ga0126379_11579135All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria761Open in IMG/M
3300010366|Ga0126379_12535897All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria611Open in IMG/M
3300010366|Ga0126379_13557600All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria522Open in IMG/M
3300010376|Ga0126381_101565243All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria952Open in IMG/M
3300010400|Ga0134122_10987716All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria823Open in IMG/M
3300012022|Ga0120191_10132745All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria551Open in IMG/M
3300012096|Ga0137389_11802993All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria508Open in IMG/M
3300012202|Ga0137363_10098593All Organisms → cellular organisms → Bacteria2216Open in IMG/M
3300012202|Ga0137363_11672228All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria529Open in IMG/M
3300012205|Ga0137362_10340457All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria1298Open in IMG/M
3300012206|Ga0137380_10458644All Organisms → cellular organisms → Bacteria1126Open in IMG/M
3300012206|Ga0137380_11000461All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria715Open in IMG/M
3300012206|Ga0137380_11290448All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria615Open in IMG/M
3300012206|Ga0137380_11478253All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria564Open in IMG/M
3300012207|Ga0137381_10339751All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria1308Open in IMG/M
3300012207|Ga0137381_10397137All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria1203Open in IMG/M
3300012207|Ga0137381_10898595All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria766Open in IMG/M
3300012207|Ga0137381_11353502All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria604Open in IMG/M
3300012209|Ga0137379_10211833All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria1852Open in IMG/M
3300012209|Ga0137379_11144119All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria684Open in IMG/M
3300012210|Ga0137378_10312432All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria1462Open in IMG/M
3300012211|Ga0137377_11593546All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria577Open in IMG/M
3300012349|Ga0137387_10100751All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria2013Open in IMG/M
3300012357|Ga0137384_10951690All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria691Open in IMG/M
3300012359|Ga0137385_10748878All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria814Open in IMG/M
3300012359|Ga0137385_10897550All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria733Open in IMG/M
3300012362|Ga0137361_10454552All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella1176Open in IMG/M
3300012363|Ga0137390_10541090All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1136Open in IMG/M
3300012923|Ga0137359_10450286All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria1139Open in IMG/M
3300012923|Ga0137359_11524844All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria556Open in IMG/M
3300012929|Ga0137404_11671041All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria591Open in IMG/M
3300012930|Ga0137407_10319038All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria1424Open in IMG/M
3300012930|Ga0137407_11188348All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria724Open in IMG/M
3300012930|Ga0137407_11921266All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria564Open in IMG/M
3300012930|Ga0137407_12235537All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria523Open in IMG/M
3300012948|Ga0126375_11188014All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria634Open in IMG/M
3300012948|Ga0126375_11254421All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria620Open in IMG/M
3300012948|Ga0126375_11806953All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria534Open in IMG/M
3300012951|Ga0164300_10560001All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria666Open in IMG/M
3300012971|Ga0126369_10125472All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium2372Open in IMG/M
3300012971|Ga0126369_11926983All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria679Open in IMG/M
3300013308|Ga0157375_10682062All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria1182Open in IMG/M
3300014488|Ga0182001_10466354All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria571Open in IMG/M
3300014968|Ga0157379_10140597All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria2176Open in IMG/M
3300015053|Ga0137405_1234120All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria533Open in IMG/M
3300015374|Ga0132255_102963243All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300016422|Ga0182039_11968864All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria537Open in IMG/M
3300025939|Ga0207665_10092088All Organisms → cellular organisms → Bacteria2102Open in IMG/M
3300027880|Ga0209481_10519202All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria615Open in IMG/M
3300031094|Ga0308199_1121029All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria596Open in IMG/M
3300031421|Ga0308194_10365744All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria517Open in IMG/M
3300031945|Ga0310913_10612226All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria772Open in IMG/M
3300032000|Ga0310903_10255836All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria845Open in IMG/M
3300032075|Ga0310890_10328608All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria1110Open in IMG/M
3300032180|Ga0307471_103139561All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria586Open in IMG/M
3300032205|Ga0307472_100122550All Organisms → cellular organisms → Bacteria → Proteobacteria1841Open in IMG/M
3300032261|Ga0306920_102874785All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria654Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil30.17%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil18.97%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere12.07%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.03%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.31%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.45%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.59%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.59%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand2.59%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.72%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.86%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.86%
TerrestrialEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial0.86%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.86%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.86%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.86%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.86%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.86%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.86%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.86%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.86%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300009812Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60EnvironmentalOpen in IMG/M
3300009817Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010029Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300012022Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014488Bulk soil microbial communities from Mexico - San Felipe (SF) metaGEnvironmentalOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300031094Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300032000Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI1027J12803_10024370913300000955SoilMSEIVEGALAAITPVTLTPGAIVVLPPGIDVLTLAPGTLEGTIFPPQRMDVRLALFEAEELVDI*
Ga0066678_1079092123300005181SoilVWQRPLALVQHGIGEVVEGALAAVAPVAFVPRSVVVIALRIDIMALAPGTLEGPLFPSQRVDVGVALIGVEELVEVREHWHG*
Ga0065704_1023637613300005289Switchgrass RhizospherePLTPVEQGMGKVVEGALAAVTPVAFAPGAVVVRPPRIDVLALAPGTLEGTIFPPQRMNVGLTLVDVEELVDV*
Ga0065707_1029248613300005295Switchgrass RhizosphereMGKVVEGALAAVTPGAFAPGAVVVRPPRIDVLALAPGTLEGTIFPPQRMNVGLTLVDVEELVDV*
Ga0066388_10067698413300005332Tropical Forest SoilEVVKGALTAVAPVAFAPRAIVVIAPRIDSVALAPGTLEWTIFPSQRMEVGLTLFDVEELVDVREHWHG*
Ga0066388_10250767923300005332Tropical Forest SoilMGEVIEGAFATVAPVTFTPGAVVIRPPRIDVLALAPGTLEGTIFPPQRMDVGLTLVDIEELVDV*
Ga0066388_10826016513300005332Tropical Forest SoilAAVTPVAFTPGAIVVRPPRIDVLTLAPGTLERPLFPPQHMDVGLTLVDVKEMVKV*
Ga0070668_10062847513300005347Switchgrass RhizosphereGIGEVVEGALATVTPGAFAPGAVVVRPPRIDVLALAPGTLEGTIFPPQRMNVGLTLVDVEELVDV*
Ga0070708_10033840323300005445Corn, Switchgrass And Miscanthus RhizosphereMSEIVEGALATMTPVALTPGAIMVLPPGIDVLTLAPGTLEGTIFPPQRVDVRLALFEAEELVDI*
Ga0066689_1099016113300005447SoilMGEVIEGAVAPVTPVAFTPGSIVILPPRIHIPALAPGTLEGAIFPPQRMDVGLTLVDVEELV
Ga0066681_1091888223300005451SoilLGEVIEGALAAVAPVAFTPGTIVVLPPWIDIPPLAPGTLEGTIFPPQRMDIGLTLVDVEELVDV*
Ga0066687_1050792523300005454SoilMQQGVGEIIEGTLAAVAPVAFAAGAIVVRPPRIDVLALAPGTLEGAIFPAQRVDVGLALSDVEEVVDVREHGHG*
Ga0068867_10188610413300005459Miscanthus RhizosphereGVGEIVEGALAAVTPGAFTPGSIVVIPPGIDVLALASGTLEGTIFPPQCMEVGLTLVGAEEVVDVREHGHR*
Ga0070698_10032824613300005471Corn, Switchgrass And Miscanthus RhizosphereGVGEIVEGALAAVTPVAFAPGAVVVLPPRIDVLALAPGTLEWSLFPPQRMDVGVTLFGVEEVVDVREHRHG*
Ga0070697_10055242723300005536Corn, Switchgrass And Miscanthus RhizosphereRLQPSHQVAFAAGAVVVLPPRIDVLALAPGTLERTLFPSQCMDVGLTLFDVEELVDVREHRHG*
Ga0070695_10175141323300005545Corn, Switchgrass And Miscanthus RhizosphereMGEVIEGALAPVTPVAFTPGSIVILPPRIHIPALAPGTLEGTIFPPQRMDVGLTLV
Ga0066691_1055024923300005586SoilGEVVEGALAAVAPVAFVPRSVVVIALRIDIMALAPGTLEGPLFPSQRVDVGVALIGVEELVEVREHWHG*
Ga0066903_10632198423300005764Tropical Forest SoilIIEGALAAVTPVAFASGTVVIRPPRIDVLALAPGTLEGPIFPPERMDIDVAAIGVEELVDV*
Ga0075417_1070837323300006049Populus RhizosphereEQGVGEIVEGALTAVAPVEFASGSVVIIALWIDSLALAPGTLEGTIFPSQRMDVGLTLFAVEELVDVRKHWHG*
Ga0066665_1139577813300006796SoilVWQRPLALVQHGIGEVVEGALAAVAPVAFVPRSVVVIALRIDIMALAPGTLEGPLFPSQRVDVGVALIGVEELVEVREH
Ga0075428_10024507223300006844Populus RhizosphereMEHRIGEVIEGALAAVAPIAFTVWAIVIRPPRIDGLALAPGTLERTLFPPQRVDVGLTVFDVEELMEVRKRRHR*
Ga0075431_10088264123300006847Populus RhizosphereMREIVEGALAAITPVALTPGAIVVRPPGIDVLTLAPGTLEGTIFPPQRMDVRLALFEAEELVDI*
Ga0075420_10018502613300006853Populus RhizosphereVEQGSGEVVKGALATVTPVPFTSGAIVVRPPRINILALAPGTLEGTIFPPQRMDVGLTLV
Ga0075420_10170883323300006853Populus RhizosphereAGKYYVLRPRERLQIIEGALAAITPVAFASGSIVIRPPRIDVLALAPGTLEGTIFPPQRMNIDVAAISVEEVVEV*
Ga0075429_10075238323300006880Populus RhizosphereMEQGVGEIVEGALTAVAPVEFASGSVVIIALWIDSLALAPGTLEGTIFPSQRMDVGLTLFAVEELVDVRKHWHG*
Ga0075419_1092721923300006969Populus RhizosphereMEQGVGEIVEGALTAVAPVEFASGSVVIIALWIDSLALAPGTLEGTIFPPQRMDVGVTLIDVEELVDV*
Ga0075419_1095391113300006969Populus RhizosphereGALAAVTPVAFAAGAVVVLPPRIDVLALASGTLKGAIFPSQRMDVGVTLVNVEEVVDVCKHRHG*
Ga0099829_1120090423300009038Vadose Zone SoilMGQIVEGALAAVAPVAFAAGAVVVIAPRINVVALTAGALQWAIFPSQRMDVDLTLVDVEEVVDV*
Ga0099829_1177253213300009038Vadose Zone SoilRPLTLVQQGIGEVIEGALAAVAPVAFAPRSVVVIAPRIDILALTPGTLERPIFPPQRMDVGLTLVDVEEVVYV*
Ga0099828_1012365923300009089Vadose Zone SoilMEQRIGEIVEGALAAVTPGAFTPRSVVVITPGVDVLALAPGTLKRTIFPPQCMDVGLTLVDVEKLVDVREHRHG*
Ga0099828_1190733913300009089Vadose Zone SoilVEGALAAVTPVAFAPGSVVVLPPRVDVLALAPGTLEWAIFLSQRMDVGLTLIDVEELVDV
Ga0075418_1055561533300009100Populus RhizosphereSLAAIAPVAFTPGAVVIRAPRINVVALAPGTLQRALFPAQRMNVGLTLFGVEELVDVREHWHR*
Ga0075418_1279387023300009100Populus RhizosphereVEQCIGQIIEGALAAVTPVAFAAGAVVIPPPRIDVLALAPGTLEGPIFPPERMDIDLAAIGVEEVVEV*
Ga0075423_1027999523300009162Populus RhizosphereMHHRIGEIVESALAAVAPVAFAPRSVVVRPPRIDVLALAPGTLEGPLFPSQRVDVGMTLIGVEELVEVREHWHG*
Ga0075423_1264958523300009162Populus RhizosphereCEGALAAVQECACEVIEGALATVTPVPFTPGAIVVRPLRIDISALAPGTLEGTIFPPQRMDVGLTLVDVEELVDV*
Ga0075423_1310895213300009162Populus RhizosphereVVEGALAAVAPVAFAPRSVVVIAPRINVLALAPGTLERTIFPSQCMNIGLTPFGVEEVVEI*
Ga0105242_1294214913300009176Miscanthus RhizosphereMRQRPLALMEHSVGEIVEGALAAVAPVALTPGAVVVRAPRIDVLALAPGTLQGTIFPPQRMDVGLTLVDVEELVDV*
Ga0126374_1052767823300009792Tropical Forest SoilRQRPLAAVEQSSGEVVEGTLAAVTPVAFTPGAIVVRPPRIDVLTLAPGTLERPLFPPQHMDVGLTLVDVKEMVKV*
Ga0126374_1114799513300009792Tropical Forest SoilALVQQGVGEVIEGALAPVTPVALTPGAVVVLPPRIDVLALAPGTLESPIFPPECMDVGVTLVDVEELMEV*
Ga0105067_107008813300009812Groundwater SandVEQGIGEVVEGALAAVTPVAFAPGSVVVLPPRIDVLALAPGTLEGPLFPSQRVDVGMTLIGVEELVEVREHWHG*
Ga0105062_108269223300009817Groundwater SandMHHRIGEIVESALAAVAPVAFAPRSVVVLPPRIDVLALAPGTLEGPLFPSQRVDVGMTLIGVEELVEVREHWHG*
Ga0126313_1078531723300009840Serpentine SoilMGKVVEGALAAVTPVAFAPGAVVVRPPRIDVLALAPGTLEWTIFPPEPMDIGVAGIGVEELVYVRKHRHG*
Ga0105074_100444713300010029Groundwater SandQNPVRQRPLALMHHRIGEIVESALAAVAPVAFAPRSVVVLPPRIDVLALAPGTLEGPLFPSQRVDVGMTLIGVEELVEVREHWHG*
Ga0126315_1022736513300010038Serpentine SoilPVWERPLALVEHGVSEIIEGTLAAVTPVAFASGAVVIIPPRIHVLALAPGTLQGTIFPPQCMDVGLTLVGVEELVDV*
Ga0126380_1126240013300010043Tropical Forest SoilMEQGRGEVVEGALAPVTPVPFTPGAIVVRPPRIDISALAPGTLEGTIFPPQRMDVRLALFEAEELVDI*
Ga0134086_1010631713300010323Grasslands SoilALAAIAPVALAPGSIVVLPPRIEVLALAPGTLEGAIFPPQRMDIGLTLVDVKELVDV*
Ga0134086_1036680013300010323Grasslands SoilEIVESALAAVAPGAFAPRSVVVLPPRIDVLALAPGTLEGPLFPSQRVDVGMTLVGIEELVEVREHWHG*
Ga0134080_1007948823300010333Grasslands SoilMHHRIGEIVESALAAVAPGAFAPRSVVVLPPRIDVLALAPGTLEGPLFPSQRVDVGMTLIGVEELVEVREHWHG*
Ga0126370_1016521513300010358Tropical Forest SoilGALAAITPVAFASGSIVICPPRIDVPALAPGTLEGPLFPPERMDIDVAAIGVEEVVDV*
Ga0126370_1201472613300010358Tropical Forest SoilMGEVIEGALAPVTPVPFTAGAIVIRPPRIDISALAPGTLEGTIFPPQRMDVRLALFGIKEVVQMREYRHG*
Ga0126376_1127773013300010359Tropical Forest SoilVEGAPTAVAPGAFASGSVVIIAPWIDSLALAPGTLEWTFFPSQRLDVRVTLFGVEELVDVREHQHG*
Ga0126376_1181948113300010359Tropical Forest SoilMREIVEGALAAMTPVALTPGAIMVLPPGIDVLTLAPGTLEGTIFPPQRMDVCLALFEAEELVDI*
Ga0126372_1015911913300010360Tropical Forest SoilPLALMEHGVGEIVEGALAAVTPGAFASGTVVIRPPRIDVLALAPGTLEGPIFPLERMDIDVAAIGVEELVDV*
Ga0126372_1020161213300010360Tropical Forest SoilMEERIGEVIEGALAAVAPVAFTSGSVVISPPRIDILALAPGTLEGALYPPERVARGVAGSGVEELVDIREHRHG*
Ga0126372_1192258113300010360Tropical Forest SoilMRESVAGALAAITPGALTPGAIVVRPPGIDVVTLAPGTLEGTICSPQRMDVGLA
Ga0126377_1091886613300010362Tropical Forest SoilQKGGQEPVRQRSLALVEQSIGEVVEGALAPIAPVAFAPGPVVVRTPRIDIGALTSGALESPIFPPQRMDVGLTLFSAEELVDV*
Ga0126377_1205453313300010362Tropical Forest SoilMGEVIEGAVAPVAPVTFTPGSVVIRPPRIDVLALAPGTLEGTIFPPQRMDVGLTLVDIE
Ga0126379_1035490423300010366Tropical Forest SoilVEQGISEVIEGALAAVAPITFAPRSIVVHSPWVDVLALAPRTLEGTIFPPQRMDIDVAAIGVEEVVDVCKHWHG*
Ga0126379_1157913523300010366Tropical Forest SoilMEEGISEVVEGALAPVTPVAFAPGAVVIRPPRIDVLALAPGTLEWAILPPQRMDVGVTLFGVEEVVDV*
Ga0126379_1253589713300010366Tropical Forest SoilMEERIGQVIEGAFAAVTPVAFAAGAVVVRAPWIDVLALAPGTLEWAIFPPQRMDIGLTLVNVEELVDI*
Ga0126379_1355760023300010366Tropical Forest SoilRPLAPVEQGMREIVEGALAAITPVALTPGAIVVLPPGIDVVTLAPGTLEGTIFPPQRMDVCLARFEAEELVDI*
Ga0126381_10156524323300010376Tropical Forest SoilMGEVIEGALATVTPVPFTPGSIVILPPRIHIPALAPGTLEGAIFPPQRMDVGLTLVDVEELVEV
Ga0134122_1098771623300010400Terrestrial SoilVEQGIGEVVEGALATVTPVAFAAGSVVVIPPRIDIPALTAGTLEGTIFPPQRMDVGLTLVDVEELVDV*
Ga0120191_1013274523300012022TerrestrialMKGALAAVAPVAFAAGAIMVVPPRIDILALAPGTLEGPIFPPERMDIDVAAIGVEEVVEV
Ga0137389_1180299323300012096Vadose Zone SoilGEVVEGAFAAVAPGAFTPGSIVIRPPRIDVLALAPGTLEGTIFPSQRMDVDLTLVDVEEVVDVCKHRHG*
Ga0137363_1009859323300012202Vadose Zone SoilMQQGIGQVIEGTLAAVAPVTFASGAVVVRPPRIDVLALAPGTLECAIFPSQRVDVGLALIDVEELVEVREHWHG*
Ga0137363_1167222823300012202Vadose Zone SoilMQQGIDEIIEGALATVAPGAFAAGAIMVRPPRIDVLALAPGTLERTLFPSQCMDGGLTLFDVEELVDVREHRHG*
Ga0137362_1034045723300012205Vadose Zone SoilMGEVVEGALAAVTPVTFTPGAIVVIPPRIDVLALAPGTLERVLFPPERMDVGLTVFGVEELVDV*
Ga0137380_1045864423300012206Vadose Zone SoilLAAITPVAFAAGAIVVRPPRINVLALTPGTLEGPIFPPECVDVRLALFGTEELMEV*
Ga0137380_1100046123300012206Vadose Zone SoilMGQIVEGALAAMAPVALAPGAIVVLPPRIDILALAPVTLEGPIFPSQRMDVGVTLVDVEEFVHVREHWHR*
Ga0137380_1129044823300012206Vadose Zone SoilMSEIVEGALAAITPVTLTPGAIVVLPPRIDVLTLAPGTLEGTIFPPQRMDVRLALFEAEELVDI*
Ga0137380_1147825313300012206Vadose Zone SoilEIVEGALAAVAPVAFASGSVVIIAPWIDSVALAPGTLEGTIFPSQRMDVGLTLFGVEEVVDVREHRHG*
Ga0137381_1033975123300012207Vadose Zone SoilMSEIVEGALAAMTPVALTPGAIMVLPPGIDVLTLAPGTLEGTIFPPQRMDVRLALFEAEELVDI*
Ga0137381_1039713723300012207Vadose Zone SoilMHHRIGEIVESALAAVAPVAFAPRSVVVLPSRIDVLALAPGTLEGPLFPSQRVDVGMTLIGVEELVEVREHWHG*
Ga0137381_1089859513300012207Vadose Zone SoilVEQRIGQILEGALAAVTPGACASGAVVVRPPGIDVLALATGTLEWPIFPPQRMDIDVAGIGVEEVVDVREHL*
Ga0137381_1135350223300012207Vadose Zone SoilMEQGLGEVVEGALATVTPVAFAAGSVVVIPPRIDIPALTAGTLEGTIFPPQRMDVGLTLVDVEELVDV*
Ga0137379_1021183323300012209Vadose Zone SoilMEQGLGEVVEGALATVTPVAFAPGAVVVRPPRIDVLALAPGTLEWAIFPPQRMDVVVTLFGVEEVVDV*
Ga0137379_1114411923300012209Vadose Zone SoilVQEGLGEVVEGALAAVTPIAFAAGAVVVLPPGIDVLALAPGTLEWPIFPPQRMDIDVAGIGVEEVVDVREHL*
Ga0137378_1031243213300012210Vadose Zone SoilQNPVRQRPPTLVEQGIGEIVEGALATVTPVAFAAGSVVVIPPRIDISALTAGTLEGTIFPPQRMDVGLTLVDVEELVDV*
Ga0137377_1159354613300012211Vadose Zone SoilMEQRIGEVVEGALTAVAPVAFASGSVVIIAPWIDSVALAPGTLEWTIFPSQRMDVGLTLFGVEEVVDVREHRHG*
Ga0137387_1010075113300012349Vadose Zone SoilVRQRPLTLVEQRIGQILEGALAAVTPGACASGAVVVRPPGIDVLALATGTLEWPIFPPQRMDIDVAGIGVEEVVDVREHL*
Ga0137384_1095169013300012357Vadose Zone SoilVEQRIGQILEGALTAVTPGACASGAVVVRPPGIDVLALATGTLEWPIFPPQRMDIDVAGIGVEEVVDVREHL*
Ga0137385_1074887823300012359Vadose Zone SoilMEQGLGEVVEGALAPVTPVAFAPGAVVVRPPRIDVLALAPGTLEWAIFPPQGMDVVVTLFGVEEVVDV*
Ga0137385_1089755023300012359Vadose Zone SoilEHGVGEIIEGTLAAVTPVAFASGSVVIIPPRINVMALAPGTLQGKIFPPQRMDVGLTLVGVEEV*
Ga0137361_1045455213300012362Vadose Zone SoilPTLVEQGIGEVVEGALTTVTPVAFAAGSVVVIPPRIDIPALTAGTLEGTIFPPQRMDVGLTLVDVEEFVDV*
Ga0137390_1054109013300012363Vadose Zone SoilAVVVFAPRIHVVALTAGALQWAIFPSRRMDVDLTLVDVEEVVDVCKHRHG*
Ga0137359_1045028613300012923Vadose Zone SoilMQQGLGEVVAGALATVTPVAFAAGSVVVIPPRIDIPALTAGTLEGTIFPPQRMDVGLTLVDVEELVDV*
Ga0137359_1152484423300012923Vadose Zone SoilIGEIVESALAAVAPVAFAPRSVVVLPPRIDVLALAPGTLEGPLFPSQRVDVGMTLIGVEELVEVREHWHG*
Ga0137404_1144705813300012929Vadose Zone SoilMEQGMGEVVEGALAAVTPVAFAAGSIVVLAPWVDVWAVTPGTLEWTIFPPECMNICLALFGVEELVQMREHWHG*
Ga0137404_1167104123300012929Vadose Zone SoilMHHRIGEIVESALAAVAPGAFAPRSVVVLPPRIDVLALAPGTLAGPLFPSQRVDVGMTLIGVEELVEVREHWHG*
Ga0137407_1031903833300012930Vadose Zone SoilMQQGIGQVIEGTLAAVAPVTLASGAVVVRPPRIDVLALAPGTLECAIFPSQRVDGGLALIDVEELVEVREHWHG*
Ga0137407_1118834823300012930Vadose Zone SoilMHHRIGEIVEGALAAVAPVAFAPRSVVVIAPRIDIMALAPGTLEGPLFPSQRVDVGVALIGVEELVEVREHWHG*
Ga0137407_1192126613300012930Vadose Zone SoilLAAVTPVAFAAGAVVVLPPGIDVLALASGTLEGPIFPSQRMNVGLTLVDVEELVDVCKHRHG*
Ga0137407_1223553723300012930Vadose Zone SoilERPFALMQQGIGEIIEGALATVAPVAFAAGAIMVRPPRIDVLALAPGTLERTLFPSQCMDVGLTLFDVEELVDVREHRHG*
Ga0126375_1118801413300012948Tropical Forest SoilVEQGLGEVVEGALATVTPVSFTPGAIVVLPPRIDILALAPRTLERTIFPPERVDVSLTVFGVEEVVDI*
Ga0126375_1125442123300012948Tropical Forest SoilVEQGVGKVIEGAFAAVTPVAFTAGAVVVRPPRINVLALAPGTLKGTLFPPQRMDIGVTLIDVEEVVEVREHWHE*
Ga0126375_1180695313300012948Tropical Forest SoilVQQGIGEVIEGALAPVAPVAFAAGAVVILPPRINVLALAPGTLEGAIFPPERMDVGVTLSDVEEVVDVRGHGHG*
Ga0164300_1056000113300012951SoilMEQGIGEVVEGALAAVTPVAFAAGSIVVLAPRVDVWAVTPGTLEWTIFPPECMNICLALFGVEELVQMREHWHG*
Ga0126369_1012547223300012971Tropical Forest SoilMNSIEGALAAVTPVAFASGTVAIHPPRIDVLALAPGTLEGPLFPPERMDIDVAAIGVEEVVDV*
Ga0126369_1192698313300012971Tropical Forest SoilLALVEQSIGEVVEGALAPIAPVAFAPGAVVVRTPRIDVLALAPGALEEPIFPPQRMDVGLTLVDVEELVDV*
Ga0157375_1068206223300013308Miscanthus RhizosphereEQGVGQVIEGAFAAVKPVAFGAGAVVVCPPRINVLALAPGTLKGPLFPPQRMDVGVTVFGVEELVDV*
Ga0182001_1046635413300014488SoilMGEVVEGAVAAVAPVAQTPGSIVVRPPRIDVLALASGTLEWAIFPPQRMDIGVTLVDVEALVDVGEDRHG*
Ga0157379_1014059713300014968Switchgrass RhizosphereVEQGVGQVIEGAFAAVKPVAFGAGAVVVCPPRINVLALAPGTLKGPLFPPQRMDVGVTVFGVEELVDV*
Ga0137405_123412013300015053Vadose Zone SoilQNPVRQWPLTLVEQGMGEVVEGALAAVTPVTFTPGSIVVIPPRIDVLALAPRTLEWTIFPPQRMNVNLTLVDVEELVDV*
Ga0132255_10296324313300015374Arabidopsis RhizosphereAVTPVAFASRAVVVRAPWIDVLALAPGTLEGAIFPPQCMDIALTLVNVEELVDIREHRHE
Ga0182039_1196886423300016422SoilMSEIVEGALAAITPVALTPGAIVVRPPGIDVVTLAPGTLEGTIFPPQRMDVRLALFEAEELVDIGKRRHR
Ga0207665_1009208813300025939Corn, Switchgrass And Miscanthus RhizosphereVRERPFALMQQGIGEIIEGALATVAPVAFAAGAIMVRPPRIDVLALAAGTLEGLLFPSQRVDVGMTLIGVEELVEVREHWHG
Ga0209481_1051920213300027880Populus RhizosphereMGEVIEGALATVTPVPFTAGSIVILPPRIHIPALAPGTLEGTIFPPQRMDVGPTLVDVEGLVDV
Ga0308199_112102923300031094SoilMSVGEVMKGAVAAVAPVAFAPGSVVVRAPRIDILALTPGTLERPIFPPQRMEGGLTLADVAEVVDV
Ga0308194_1036574413300031421SoilMGEVVEGAFAAIAPGAFTPGSIVIRPPRIDVLALAPGTLERAFFPPERMDVGLTLFGVEELVNV
Ga0310913_1061222623300031945SoilMSEVVEGALAAVTPVPFTPGSIVVIPPRIDVLALAPGTLEGAIFPPQRMDVDLAGFYTEQLETVARVPGCP
Ga0310903_1025583623300032000SoilVEQGIGEVVKGALATVTPVPFTSGAIVVRPPRINILALAPGTLEGTIFPPQRMDIGLTLG
Ga0310890_1032860813300032075SoilVEQGIGEVVKGALATVTPVPFTSGAIVVRPPRINILALAPGTLEGTIFPPQRMDVSLTLVDVEELVDI
Ga0307471_10313956123300032180Hardwood Forest SoilETQQKRRQNPVRQRPLALMHHRIGEIVESALAAVAPGAFAPRSVVVRPPRIDVLALAAGTLEGLLFPSQRVDVGMTLIGVEELVEVREHWHG
Ga0307472_10012255013300032205Hardwood Forest SoilTPVEQGRGEVVEGALAAVTPGAFTPGAIVVRPPRIDVLTLAPGTLERPIFPPQRMDVGLTLVDIEELVKV
Ga0306920_10287478523300032261SoilEIVEGALAAITPVALTPGAIVVRPPGIDVVTLAPGTLEGTIFPPQRMDVRLALFEAEELVDI

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.