Metagenome Family F078607

Basic Information
Family ID	F078607
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	57 residues
Representative Sequence	MAPQSVISTTLQLLRDKLVDNSFLAHPLIRAIEEHGNLVKVSGGLRVEQPVIFGD
Number of Associated Samples	93
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	75.00 %
% of genes near scaffold ends (potentially truncated)	3.45 %
% of genes from short scaffolds (< 2000 bps)	2.59 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (97.414 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (38.793 % of family members)
Environment Ontology (ENVO)	Unclassified (61.207 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (75.862 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.64% β-sheet: 14.55% Coil/Unstructured: 41.82%
Feature Viewer

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Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF13280	WYL	6.03
PF03237	Terminase_6N	0.86

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.41 %
All Organisms	root	All Organisms	2.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.41 %
Viruses	superkingdom	All Organisms → Viruses	2.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.59 %

Scaffold	Taxonomy	Length	IMG/M Link
3300007538\|Ga0099851_1078041	Not Available	1277	Open in IMG/M
3300010368\|Ga0129324_10041427	All Organisms → Viruses → Predicted Viral	2144	Open in IMG/M
3300017951\|Ga0181577_10182777	All Organisms → Viruses → Predicted Viral	1410	Open in IMG/M
3300027888\|Ga0209635_10281556	All Organisms → Viruses → Predicted Viral	1327	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.14%
Host-Associated	Host-Associated	0.86%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.28%
Terrestrial	Environmental → Terrestrial	0.86%
Algae	Host-Associated → Algae	0.86%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	86.21%
Freshwater	Environmental → Aquatic → Freshwater	10.34%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	1.72%
Soil	Environmental → Terrestrial → Soil	0.86%
Green Algae	Host-Associated → Algae → Green Algae	0.86%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	47.41%
Oceanic	Environmental → Aquatic → Marine → Oceanic	14.66%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	12.07%
Lake	Environmental → Aquatic → Freshwater → Lake	6.03%
Strait	Environmental → Aquatic → Marine → Strait	5.17%
Lentic	Environmental → Aquatic → Freshwater → Lentic	2.59%
Inlet	Environmental → Aquatic → Marine → Inlet	1.72%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.72%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	1.72%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.86%
River	Environmental → Aquatic → Freshwater → River	0.86%
Pelagic	Environmental → Aquatic → Marine → Pelagic	0.86%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.86%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.86%
Sediment	Environmental → Aquatic → Marine → Sediment	0.86%
Clay	Environmental → Terrestrial → Soil → Clay	0.86%
Ectosymbionts	Host-Associated → Algae → Green Algae → Ectosymbionts	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	45.69%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	12.07%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	10.34%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	5.17%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	4.31%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	4.31%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	2.59%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.72%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	1.72%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	1.72%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.72%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	1.72%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.86%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.86%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	0.86%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.86%
Microbial Mats	Environmental → Aquatic → Marine → Hydrothermal Vents → Microbial Mats	0.86%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.86%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.86%
Unclassified	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	38.79%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	12.07%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	10.34%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	5.17%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	4.31%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.45%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	2.59%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	2.59%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	1.72%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.72%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	1.72%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	1.72%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.72%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	1.72%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.86%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.86%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.86%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.86%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	0.86%
Microbial Mat	Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat	0.86%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	0.86%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.86%
Hydrothermal Fe-Rich Mat	Environmental → Aquatic → Marine → Hydrothermal Vents → Microbial Mats → Hydrothermal Fe-Rich Mat	0.86%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.86%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.86%
Macroalgal Surface	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface	0.86%

Visualization

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000973	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY93	Host-Associated	Open in IMG/M
3300004097	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006734	Marine viral communities from the Gulf of Mexico - 31_GoM_OMZ_CsCl metaG	Environmental	Open in IMG/M
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006867	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA	Environmental	Open in IMG/M
3300006870	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300006988	Marine viral communities from Cariaco Basin, Caribbean Sea - 24B_WHOI_OMZ_CsCl	Environmental	Open in IMG/M
3300007345	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30	Environmental	Open in IMG/M
3300007346	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300007540	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG	Environmental	Open in IMG/M
3300007542	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG	Environmental	Open in IMG/M
3300007640	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28	Environmental	Open in IMG/M
3300009426	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420	Environmental	Open in IMG/M
3300009529	Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG	Environmental	Open in IMG/M
3300010149	Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG	Environmental	Open in IMG/M
3300010155	Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaG	Environmental	Open in IMG/M
3300010156	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel2S_0400h metaG	Environmental	Open in IMG/M
3300010300	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNA	Environmental	Open in IMG/M
3300010316	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.8_DNA	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010368	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNA	Environmental	Open in IMG/M
3300010430	Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samples	Environmental	Open in IMG/M
3300013010	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNA	Environmental	Open in IMG/M
3300013130 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment s2_kivu2a2	Environmental	Open in IMG/M
3300013132 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_9.5m	Environmental	Open in IMG/M
3300017731	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16	Environmental	Open in IMG/M
3300017746	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29	Environmental	Open in IMG/M
3300017759	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28	Environmental	Open in IMG/M
3300017779	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16	Environmental	Open in IMG/M
3300017782	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017990	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_S_2 metaG	Environmental	Open in IMG/M
3300018039	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071402CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018065	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_S_2 metaG	Environmental	Open in IMG/M
3300018420	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020054	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413BT metaG (spades assembly)	Environmental	Open in IMG/M
3300020184	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101409BT metaG (spades assembly)	Environmental	Open in IMG/M
3300021093	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015023 Mahale A surface	Environmental	Open in IMG/M
3300021364	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304	Environmental	Open in IMG/M
3300021368	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300022050	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v3)	Environmental	Open in IMG/M
3300022068	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)	Environmental	Open in IMG/M
3300022071	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v2)	Environmental	Open in IMG/M
3300022158	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v3)	Environmental	Open in IMG/M
3300022167	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v2)	Environmental	Open in IMG/M
3300022176	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v2)	Environmental	Open in IMG/M
3300022179	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N	Environmental	Open in IMG/M
3300022198	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)	Environmental	Open in IMG/M
3300022208	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_4_1	Environmental	Open in IMG/M
3300023116	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG	Environmental	Open in IMG/M
3300023176	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG	Environmental	Open in IMG/M
3300023210 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MG	Environmental	Open in IMG/M
3300023368	Hydrothermal Fe-rich mat microbial community from Snakepit Site, Mid-Atlantic Ridge, Atlantic Ocean - 667-BS4	Environmental	Open in IMG/M
3300024059 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_2	Environmental	Open in IMG/M
3300024354	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepB_8d	Environmental	Open in IMG/M
3300024433	Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG (SPAdes)	Environmental	Open in IMG/M
3300024518 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2	Environmental	Open in IMG/M
3300025057	Marine viral communities from the Gulf of Mexico - 31_GoM_OMZ_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025098	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)	Environmental	Open in IMG/M
3300025103	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)	Environmental	Open in IMG/M
3300025543	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025652	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)	Environmental	Open in IMG/M
3300025653	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025655	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025671	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)	Environmental	Open in IMG/M
3300025687	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025759	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)	Environmental	Open in IMG/M
3300025769	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)	Environmental	Open in IMG/M
3300025810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025818	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300027888	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-30_32 (SPAdes)	Environmental	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300032274	Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 6-month pyrrhotite 1	Environmental	Open in IMG/M
3300034063	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Oct2008D10-rr0053	Environmental	Open in IMG/M
3300034071	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Oct2008D10-rr0110	Environmental	Open in IMG/M
3300034092	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2012-rr0069	Environmental	Open in IMG/M
3300034418	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
BBAY93_100366953	3300000973	Macroalgal Surface	MAPPSSVLSTTLRLLRDKLVDNSFLAHPLFRAIEASGNLVKVAGGSRIDEPVIF
Ga0055584_1012280331	3300004097	Pelagic Marine	MAPQSVISTTLQLLRDKLVDNSYLSHPLIRAIEQAGNLVKVSGGL
Ga0049081_102231751	3300005581	Freshwater Lentic	MPINPSILSTTLQLLRDKLIDNSFVSHPLFRAIEQSGNLVKVNGGSRVEQPVIFGDHSQISVLNNGFEPVSLAVTDPFN
Ga0075474_101205002	3300006025	Aqueous	MAPQSVISTTLQLLRDKLVDNSYLSHPILRAVEQAGNLVKVSGGLRVEQPVI
Ga0098073_10448881	3300006734	Marine	MPTQSILSTTLQLLRDRLVDNSFISHPLFRAVEQAGNLVKVSGGARVEQPVIFGDHSQITEL
Ga0098073_10467002	3300006734	Marine	MAPQSVISTTLQLLRDKLVDNSYLAHPLFRAIEQSGNLIRVSGGARVEQPVIFGDHSQLTELTNGFEPVSMAVTDPFQV
Ga0098040_10856972	3300006751	Marine	MAPQSVISTTLQLLRDKLVDNSYLSHPLIRAIEQAGNLVKVSGGLRVEQPVIFGEHSTITELSNGFEPV
Ga0098054_13458502	3300006789	Marine	MAPPSSVLSTTLRLLRDKLVDNSFLAHPLFRAIEQSGNLVKVAGGSRIDEPVIFG
Ga0098055_10133181	3300006793	Marine	MAPPSSVLSTTLRLLRDKLVDNSFLAHPLFRAIEQSGNLVKVAGGSRIDEPVIFGDHTSITE
Ga0070749_100583865	3300006802	Aqueous	MAPQSVLTTTLQLLRDKLVDNSFLAHPLIRAIEEAGNLV
Ga0070754_101140861	3300006810	Aqueous	MATPSILSTTLQLLRDKLVDNSYLAHPLIRAIEEHGNLIKVSGGSRVEQPV
Ga0075476_101446361	3300006867	Aqueous	MAPQSVISTTLQLLRDKLVDNSYLSHPILRAVEQAGNLVKVSGGLRVEQPVIF
Ga0075479_101532231	3300006870	Aqueous	LAAPQSVISTTLQLLRDKLIDNSFLSHPLFRAIESAGNLVKVSGGLRVEQPVIFGEHSSI
Ga0070750_100403101	3300006916	Aqueous	MATQSILSTTLQLLRDKLVDNSYLAHPLFRAVEEHGNLVKVSGGLRVEQPVIFGDHSSITELTNGFEPVSMAVTDPFQSAKFEY
Ga0070750_101391592	3300006916	Aqueous	MAPQSVLTTTLQLLRDKLVDNSFLAHPLIRAIEEAGNLVQVSGGARVDQPVIFGDHSSITELSNGFEPV
Ga0070750_101605572	3300006916	Aqueous	MAPQSVISTTLQLLRDKLVDNSFLAHPLIRAIEEHGNLVKVSGGLRVEQPVIFGDHSSITELSNGFEP
Ga0070746_101181191	3300006919	Aqueous	MATPSILSTTLQLLRDKLVDNSYLAHPLIRAIEEHGNLIKVSGGSRVEQPVI
Ga0098064_1468352	3300006988	Marine	MAPQSVISTTLQLLRDKLVDNSYLSHPLIRAIEQAGNLVKVSGGLRVEQ
Ga0070752_12521652	3300007345	Aqueous	MAPQSVISTTLQLLRDRLVDNSFLSHPLIRAIEEAGNLVKVSGGLRVEQ
Ga0070753_10331645	3300007346	Aqueous	MAPQSVLSTTLQLLRDKLVDNSYLSHPLFRAVEQAGNLVKVSGGLRV
Ga0070753_13529572	3300007346	Aqueous	MAPQSVISTTLQLLRDKLIDNSYLSHPLIRAIEQAGN
Ga0099851_10780413	3300007538	Aqueous	MEAVMAPQSVISTTLQLLRDKLVDNSFLSHPLIRAIEEHGNLV
Ga0099847_11193672	3300007540	Aqueous	MAPQSVISTTLQLLRDKLVDNSFLSHPLFRAIEEAGNLVKVSGGLRVEQPVIFGDHSSITELSNGFEPVSMAVTDPFQ
Ga0099847_12130781	3300007540	Aqueous	MEASVAAPQSVISTTLQLLRDKLIDNSFLSHPLFRAIESAGNLVKVSGGLRVEQPVIF
Ga0099846_11456921	3300007542	Aqueous	MPINPSILSTTLQLLRDKLIDNSFVSHPLFRAIEQSGNLVKVNG
Ga0070751_12404062	3300007640	Aqueous	MATQSILSTTLQLLRDKLVDNSYLAHPLFRAVEEHGNLIKVSGGLRVEQPVIFGDHSSITELTNGFEPVSMAVTDPFQ
Ga0115547_11977902	3300009426	Pelagic Marine	MAPQSVISTTLQLLRDKLVDNSFLSHPLFRAIEGAGNLVKVSGGLRVEQPVIFGEHSS
Ga0114919_101525543	3300009529	Deep Subsurface	MAPQSVLSTTLQLLRDKLVDNSFLAHPLVRAIEEHGNLIKVSGGSRVEQPVIFGDHSTITELSNGFEPVSMA
Ga0114919_105650532	3300009529	Deep Subsurface	MAPQSVLSTTLQLLRDKLVDNSFLAHPLVRAVEEHGNLIKVSGGSRVEQPVIFGDHSTITELSNGFEPVSMA
Ga0098049_11241931	3300010149	Marine	MAPQSVISTTLQLLRDKLIDNSFLAHPLIRAIEDHGN
Ga0098047_100781471	3300010155	Marine	MATQSIISTTLQLLRDKLVDNSYLSHPLFRAIEASGNLVKVSGGLRVEQPVIFGDHSSIT
Ga0068873_10095862	3300010156	Freshwater Lake	MPVNPSILSTTLQLLRDKLIDNSFVSHPLFRAIEQAGNLVKVSGGSRVEQPVIFGEHLSERAE*
Ga0129351_11776972	3300010300	Freshwater To Marine Saline Gradient	MAPQSVISTTLQLLRDKLVDNSFLSHPLFRAIEEAGNLVKVSGGLRVEQPVIFGDHSSITELSNGFEPVSM
Ga0136655_11089772	3300010316	Freshwater To Marine Saline Gradient	MATQSILSTTLQLLRDKLVDNSYLAHPLFRAVEEHGNLI
Ga0129333_105364742	3300010354	Freshwater To Marine Saline Gradient	MPINPSILSTTLQLLRDKLIDNSFVSHPLFRAIEQSGNLVKVNGGSRVEQPVIFGD
Ga0129324_100414271	3300010368	Freshwater To Marine Saline Gradient	MEASVAAPQSVISTTLQLLRDKLIDNSFLSHPLFRAIEQAGNLVKVS
Ga0118733_1055200372	3300010430	Marine Sediment	MATPSILSTTLQLLRDKLVDNSYLAHPLIRAIEEHGNLIKVSGGSRVEQPVIFGDHSTITELSNGFE
Ga0129327_105865822	3300013010	Freshwater To Marine Saline Gradient	MEASVAAPQSVISTTLQLLRDKLIDNSFLSHPLFRAIEQAGNLVKVSGGLRVEQPVIFGEHS
(restricted) Ga0172363_100804791	3300013130	Sediment	MPINASILSTTLQLLRDKLIDNSFVSHPLFRAIEQAGNLVKVNGDSRVEQPVIFGDHSQISVLNNGFE
(restricted) Ga0172363_102908811	3300013130	Sediment	MPINPSILSTTLQLLRDKLIDNSFVSHPLFRAIEQAGNLVKVSGGSRVEQPVIFGDHSSI
(restricted) Ga0172372_106086052	3300013132	Freshwater	MPINASILSTTLQLLRDKLIDNSFVSHPLFRAIEQSGNLVKVNGGSRVEQPVIFGDHSQISVLNNGFEPVSLAVTDPFNAAKY
Ga0181416_11621692	3300017731	Seawater	LAPQSVISTTLQLLRDKLVDNSFLAHPLFRAIEGAGNLVKVSGGLRVEQPVIFGEHSSIT
Ga0181389_12060342	3300017746	Seawater	MAPQSVISTTLQLLRDKLVDNSFLSHPLFRAIEGAGN
Ga0181414_11486701	3300017759	Seawater	MAPQSIISTTLQLLRDKLVDNSFLAHPLIRAIEEHGNLVKVSGGLRVEQPVIFGD
Ga0181395_12772981	3300017779	Seawater	LAAPQSVISTTLQLLRDKLIDNSFLSHPLFRAIESAGNLVKVSGGLRVEQPVIFG
Ga0181380_12701092	3300017782	Seawater	MPPSSVLTTTLQLLRDKLVDNSFLAHPLIQAISEHGNLVKVSGGSR
Ga0181577_101827771	3300017951	Salt Marsh	VAAPQSVISTTLQLLRDKLLDNSFLSHPLFRAIEQAGNLVKVSGGLR
Ga0181585_109349472	3300017969	Salt Marsh	MAPPTSVLSTTLQLLRDKLVDNSYLAHPLFRAIEQSGNLIRVSGGARVEQPVIFGDHSQLTELTNGFEPVSMA
Ga0181585_110633841	3300017969	Salt Marsh	MAPQSVISTTLQLLRDKLIDNSFLSHPLFRAIEQAGNLVKVSGGLRVE
Ga0180436_115450111	3300017990	Hypersaline Lake Sediment	MAPQSVLSTTLQLLRDKLVDNSFLAHPLVRAIEEHGNLIKVSGGSRVEQPVIFG
Ga0181579_101600893	3300018039	Salt Marsh	MAPQSVISTTLQLLRDKLIDNSFIAHPLIRAIEDHGNLIKVSGGLRVDQPVIFGDHSSITELS
Ga0180430_104364142	3300018065	Hypersaline Lake Sediment	MAPQSVISTTLQLLRDKLVDNSFLAHPLIRAIEEHGNLVKVSGGLRVEQPVIFGDHSTITELSNGFEPVSMAV
Ga0181563_106612822	3300018420	Salt Marsh	MATQSILSTTLQLLRDKLVDNSYLAHPLFRAVEEHGNLIKVSGGLRVEQPVIFGDHSSITELTNGFEPVSMAVTD
Ga0181592_104816371	3300018421	Salt Marsh	MAPQSVISTTLQLLRDKLIDNSFLSHPLFRAIESAGNLVKVSGGLRVEQPVIFGEHSSIT
Ga0181592_108151582	3300018421	Salt Marsh	MATQSILSTTLQLLRDKLVDNSYLAHPLFRAVEEHGNLIKVSGGLRVEQPVIFGDHSSITEL
Ga0181592_110503062	3300018421	Salt Marsh	MAPPTSVLSTTLQLLRDKLVDNSYLAHPLFRAIEQSGNLVRVSGGSR
Ga0181594_100116401	3300020054	Salt Marsh	MAPPTSVLSTTLQLLRDKLVDNSYLAHPLFRAIEQSGNLIRVSGGARVEQPVIFGDHSQLTELTNGFEPVS
Ga0181594_103025951	3300020054	Salt Marsh	MATQSILSTTLQLLRDKLVDNSYLAHPLFRAVEEH
Ga0181594_104582851	3300020054	Salt Marsh	MAPPTSVLSTTLQLLRDKLVDNSYLAHPLFRAIEQSGNLIRVSGGARV
Ga0181573_103857432	3300020184	Salt Marsh	MAPPSSVLSTTLRLLRDKLVDNSFLAHPLFRAIEAS
Ga0194123_100608771	3300021093	Freshwater Lake	MPINPSILSTTLQLLRDKLIDNSFVSHPLFRAIEQAGNLVKVNGGSRVE
Ga0213859_101382062	3300021364	Seawater	MAPQSVISTTLQLLRDKLVDNSFLSHPLFRAIEEAGNLVKVSGGLRVEQPVIFGDHSSITELS
Ga0213859_104386001	3300021364	Seawater	MAPPTSVLSTTLQLLRDKLVDNSYLAHPLFRAIEQSGNLIRVSGGARVEQPVIFGDHSQLTELTNGFEPVSMAVTDPFQVAKFE
Ga0213860_101536492	3300021368	Seawater	MAPPTSVLSTTLQLLRDKLVDNSYLAHPLFRAIEQSGNLIRVSGGARVEQPVIFGEHSALTELTNGFEPVSMAV
Ga0222717_103055651	3300021957	Estuarine Water	MAPQSVISTTLQLLRDKLIDNSFLAHPLIRAIEDHGNLIKV
Ga0222718_105027861	3300021958	Estuarine Water	MAPPSSVLSTTLRLLRDKLVDNSFLAHPLFRAIEASGNLVKVSGGSRIDEPVIFGDHTTITELTGA
Ga0196883_10397771	3300022050	Aqueous	MAPQSVISTTLQLLRDKLVDNSYLSHPILRAVEQAGNLVKVSGGLRVE
Ga0212021_10039781	3300022068	Aqueous	MAPQSVISTTLQLLRDKLVDNSFLAHPLIRAIEEHGNLVKVSGGLRVEQPVIFGDHSSITELSNGFE
Ga0212021_10458762	3300022068	Aqueous	MAPQSVISTTLQLLRDKLVDNSFLAHPLIRAIEEHGNLVKVSGGLRVEQPVIFGD
Ga0212028_10763222	3300022071	Aqueous	MAPPTSVLSTTLQLLRDKLVDNSYLAHPLFRAIEQSGNLIRVSGGARVEQPVIFGDHSQLTELTNGFEPVSMAVTDPFQVAKFEY
Ga0196897_10252512	3300022158	Aqueous	MAPQSVISTTLQLLRDKLVDNSYLSHPILRAVEQAGNLVKVSGGLR
Ga0212020_10655892	3300022167	Aqueous	MPTQSIISTTLQLLRDKLVDNSYLAHPLIRSIEEHGNLVKVAGGQRI
Ga0212020_10707102	3300022167	Aqueous	MAPQSVISTTLQLLRDKLIDNSFLSHPLFRAIESAGNLVKVSGGLRVEQPVI
Ga0212031_10316442	3300022176	Aqueous	MAPQSVISTTLQLLRDKLVDNSYLSHPLFRAVEQAGNLVKVSGGLRVEQPVIFGDHSQISELSNGF
Ga0181353_10017401	3300022179	Freshwater Lake	MPINPSILSTTLQLLRDKLIDNSFVSHPLFRAIEQSGNLVKVN
Ga0196905_11580191	3300022198	Aqueous	VALNSVLSTTLQLLRDKLVDNSFISHPLLRAIETHGNLVKVSGGARI
Ga0196905_11625441	3300022198	Aqueous	MAPQSVLSTTLQLLRDKLVDNSFLAHPLVRAIEEHGNLIKVSGGSRVEQPVIFGDHSSIT
Ga0224495_103352322	3300022208	Sediment	MATPSILSTTLQLLRDKLVDNSYLAHPLIRAIEEHGNLIKVSGGSRVEQPVIFGDHSTITELSNGFEPVSMSVTDPFNAA
Ga0255751_104510272	3300023116	Salt Marsh	MAPQSVISTTLQLLRDKLVDNSFLAHPLIRAIEDHGNLV
Ga0255772_105219872	3300023176	Salt Marsh	MAPQSVISTTLQLLRDKLVDNSFLSHPLFRAIEEAGNLVKVSGGLRVE
(restricted) Ga0233412_103385922	3300023210	Seawater	MATPSILSTTLQLLRDKLVDNSYLAHPLIRAIEEHGNL
Ga0256753_11341722	3300023368	Hydrothermal Fe-Rich Mat	MASPVSVLSTTLQLLRSQLIDNSFLAHPLIRAIEDHGNIV
(restricted) Ga0255040_105251671	3300024059	Seawater	MATPSILSTTLQLLRDKLVDNSYLAHPLIRAIEEHGNLIKVS
Ga0255171_10484611	3300024354	Freshwater	MPVNPSILSTTLQLLRDKLIDNSFISHPLFRAIEQAGNLVKVSGGSRIEQPVIFG
Ga0209986_101988121	3300024433	Deep Subsurface	MEATLAPQSVISTTLQLLRDKLVDNSFLAHPLFRAIEGAGNLVKVSGGLRVEQPV
(restricted) Ga0255048_101413382	3300024518	Seawater	MAPQSVISTTLQLLRDKLVDNSFLSHPLFRAIEGAGNL
Ga0208018_1323602	3300025057	Marine	MPTQSILSTTLQLLRDRLVDNSFISHPLFRAVEQAGNLVKVSGGARVEQPVIFGD
Ga0208434_10314203	3300025098	Marine	MAPQSVISTTLQLLRDKLVDNSYLSHPLIRAIEQAGNLVKVSGGLRVEQPVIFGEH
Ga0208434_10662682	3300025098	Marine	MAPPSSVLSTTLRLLRDKLVDNSFLAHPLFRAIEQSGNLVKVAGGSRIDEP
Ga0208013_11520331	3300025103	Marine	MAPQSVISTTLQLLRDKLVDNSYLSHPLIRAIEQAGNLVKVSGGLRVEQPVIFGEHSSIT
Ga0208303_10801442	3300025543	Aqueous	MAPPTSVLSTTLQLLRDKLVDNSYLAHPLFRAIEQSGNLIRVSGGARVEQPVIFGDHSQLTELTNGFE
Ga0208134_11221721	3300025652	Aqueous	MAPPSSVLSTTLRLLRDKLVDNSFLAHPLFRAIEQSGNLVK
Ga0208428_10989882	3300025653	Aqueous	MAPQSVISTTLQLLRDKLIDNSFLSHPLFRAIESAGNL
Ga0208428_11767281	3300025653	Aqueous	MAPPTSVLSTTLQLLRDKLVDNSYLAHPLFRAIEQSGNLIRVSGGARVEQPVIFGDHSQLTELTNGFEPVSMAVTDPF
Ga0208795_10773572	3300025655	Aqueous	MAPQSVLSTTLQLLRDKLVDNSYLSHPLFRAVEQAGNLVKVSGGLRVEQPVIFGEHSQISELSNGFEPV
Ga0208795_11740132	3300025655	Aqueous	VALNSVLSTTLQLLRDKLVDNSFISHPLLRAIETHGNLVKVSGGARIEQPVIF
Ga0208898_10724091	3300025671	Aqueous	MAPQSVISTTLQLLRDKLVDNSYLSHPILRAVEQAGNLVKVSGGLRVEQPVIFGDHSSITELSNGFEPVSMAVTDPFQS
Ga0208019_10442581	3300025687	Aqueous	MATNSILSTTLQLLRDKLVDNSYLAHPLFRAIEEHGNLIKVSGGLRVEQPVIFGDHSTIT
Ga0208899_11236982	3300025759	Aqueous	MAPQSVISTTLQLLRDKLVDNSFLAHPLIRAIEEHGNL
Ga0208767_10466214	3300025769	Aqueous	MAPQSVISTTLQLLRDRLVDNSFLSHPLIRAIEEAGNLVKVSGGLRVEQPVIFGDHSSITELSNGF
Ga0208767_10857831	3300025769	Aqueous	MATQSILSTTLQLLRDKLVDNSYLAHPLFRAVEEHGNLVKVSGG
Ga0208767_12197222	3300025769	Aqueous	MAPQSVLTTTLQLLRDKLVDNSFLAHPLIRAIEEAGNLVQVSG
Ga0208767_12402582	3300025769	Aqueous	MPTQSIISTTLQLLRDKLVDNSYLAHPLIRSIEEHGNLVKVAGGQRIDQPVIFGETTSIT
Ga0208543_10077041	3300025810	Aqueous	MEASVAAPQSVISTTLQLLRDKLIDNSFLSHPLFR
Ga0208542_10781731	3300025818	Aqueous	MAPQSVISTTLQLLRDKLIDNSFIAHPLIRAIEDHGNLIKVSGGLRVDQPVIFGDHSSITELSNGFEPVSMAVTDPFQTAKFE
Ga0208644_13494581	3300025889	Aqueous	MAPQSVLSTTLQLLRDKLVDNSYLSHPLFRAVEQAGNLVKVSGGLRVEQPVIF
Ga0208644_14059901	3300025889	Aqueous	MAPQSVLTTTLQLLRDKLVDNSFLAHPLIRAIEEA
Ga0209635_102815563	3300027888	Marine Sediment	MAPQSVLSTTLQLLRDKLVDNSFLAHPLVRAIEEHGNLIKVSG
Ga0209536_1026946901	3300027917	Marine Sediment	MAPPTSVLSTTLQLLRDKLVDNSYLAHPLFRAIEQSGNLIRVSGGARVEQPVIFGDHSQLTELTNGFEPVSMAVTDPFQ
Ga0307380_104695001	3300031539	Soil	MAPQSVLTTTLQLLRDKLVDNSFLAHPLIRAIEDAGNLIKVSGGSRIEQPV
Ga0315906_103649541	3300032050	Freshwater	MAVPNSVLSTTLQLLRDKLIDNSFIAHPLFKAIEAAGNVVKVQGGSRVEQPVIFGSHSAISEFSNGFEPM
Ga0316203_12174301	3300032274	Microbial Mat	MAPQSVISTTLQLLRDKLVDNSYLSHPLIRAIEQAGNLVKVSGGLRVEQPVIFGEHS
Ga0335000_0278058_3_191	3300034063	Freshwater	MAVPNSVLSTTLQLLRDKLIDNSFIAHPLFKAIEAAGNVVKVQGGSRVEQPVIFGSHSAISEF
Ga0335028_0391762_2_247	3300034071	Freshwater	MAVPNSVLSTTLQLLRDKLIDNSFIAHPLFKAIEAAGNVVKVQGGSRVEQPVIFGSHSAISEFSNGFEPMSLAVTDPFTKAT
Ga0335010_0374125_632_787	3300034092	Freshwater	MPTNSLITTTLQLLRDKLIDNSFISHPLLRAIESKGRLRKVSGGLRIEQPVI
Ga0348337_013250_4423_4581	3300034418	Aqueous	MAPQSVISTTLQLLRDRLVDNSFLSHPLIRAIEEAGNLVKVSGGLRVEQPVIF

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F078607

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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