NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F078740

Metagenome / Metatranscriptome Family F078740

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F078740
Family Type Metagenome / Metatranscriptome
Number of Sequences 116
Average Sequence Length 111 residues
Representative Sequence MDESRRNFILGMSSAYAALSVSAATGTSMMLKSTNNVLEKKNINISDWKFSSYDGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN
Number of Associated Samples 84
Number of Associated Scaffolds 116

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 5.17 %
% of genes near scaffold ends (potentially truncated) 37.07 %
% of genes from short scaffolds (< 2000 bps) 78.45 %
Associated GOLD sequencing projects 72
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (56.034 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh
(37.931 % of family members)
Environment Ontology (ENVO) Unclassified
(42.241 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(96.552 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: Yes Secondary Structure distribution: α-helix: 62.28%    β-sheet: 0.00%    Coil/Unstructured: 37.72%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 116 Family Scaffolds
PF00589Phage_integrase 14.66
PF13361UvrD_C 12.07
PF13438DUF4113 12.07
PF03372Exo_endo_phos 2.59
PF10544T5orf172 1.72
PF13087AAA_12 1.72
PF04480DUF559 1.72
PF02954HTH_8 1.72
PF04326AlbA_2 1.72
PF01555N6_N4_Mtase 0.86
PF06941NT5C 0.86
PF04851ResIII 0.86
PF02384N6_Mtase 0.86
PF12705PDDEXK_1 0.86
PF14487DarT 0.86
PF00266Aminotran_5 0.86
PF07661MORN_2 0.86
PF01807zf-CHC2 0.86
PF13086AAA_11 0.86
PF01844HNH 0.86

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 116 Family Scaffolds
COG2865Predicted transcriptional regulator, contains HTH domainTranscription [K] 1.72
COG0358DNA primase (bacterial type)Replication, recombination and repair [L] 0.86
COG0863DNA modification methylaseReplication, recombination and repair [L] 0.86
COG1041tRNA G10 N-methylase Trm11Translation, ribosomal structure and biogenesis [J] 0.86
COG2189Adenine specific DNA methylase ModReplication, recombination and repair [L] 0.86
COG2849Antitoxin component YwqK of the YwqJK toxin-antitoxin moduleDefense mechanisms [V] 0.86
COG45025'(3')-deoxyribonucleotidaseNucleotide transport and metabolism [F] 0.86


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms56.03 %
UnclassifiedrootN/A43.97 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10017291All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae → Woeseiaceae bacterium4334Open in IMG/M
3300000101|DelMOSum2010_c10032445Not Available2848Open in IMG/M
3300000947|BBAY92_10054862All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae → Woeseiaceae bacterium1081Open in IMG/M
3300001348|JGI20154J14316_10001652All Organisms → cellular organisms → Bacteria19569Open in IMG/M
3300001352|JGI20157J14317_10126909Not Available845Open in IMG/M
3300001778|ACM18_1027661Not Available505Open in IMG/M
3300003474|NAP4_1019519Not Available1233Open in IMG/M
3300004097|Ga0055584_100935870Not Available907Open in IMG/M
3300004279|Ga0066605_10034581Not Available2387Open in IMG/M
3300004279|Ga0066605_10083304All Organisms → cellular organisms → Bacteria1361Open in IMG/M
3300005239|Ga0073579_1050750All Organisms → cellular organisms → Bacteria → Proteobacteria1393Open in IMG/M
3300005239|Ga0073579_1187686All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria7500Open in IMG/M
3300005510|Ga0066825_10068055All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium1278Open in IMG/M
3300005837|Ga0078893_10706546All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → unclassified Halieaceae → gamma proteobacterium HIMB552036Open in IMG/M
3300005837|Ga0078893_10816321All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium SAR86A2746Open in IMG/M
3300005837|Ga0078893_11725333Not Available677Open in IMG/M
3300005837|Ga0078893_12043998Not Available1145Open in IMG/M
3300006404|Ga0075515_10640307Not Available580Open in IMG/M
3300006614|Ga0101439_114713All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2821Open in IMG/M
3300006621|Ga0101441_126017Not Available4876Open in IMG/M
3300007280|Ga0101452_123502All Organisms → cellular organisms → Bacteria → Proteobacteria4411Open in IMG/M
3300007862|Ga0105737_1119801Not Available673Open in IMG/M
3300008012|Ga0075480_10130254All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1383Open in IMG/M
3300008961|Ga0102887_1155721All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae → Woeseiaceae bacterium705Open in IMG/M
3300009071|Ga0115566_10332925Not Available888Open in IMG/M
3300009071|Ga0115566_10575604Not Available633Open in IMG/M
3300009076|Ga0115550_1131581All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED44891Open in IMG/M
3300009076|Ga0115550_1240534Not Available596Open in IMG/M
3300009132|Ga0118730_1301389All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae → Woeseiaceae bacterium825Open in IMG/M
3300009436|Ga0115008_10935232Not Available643Open in IMG/M
3300009496|Ga0115570_10146622All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium1106Open in IMG/M
3300009496|Ga0115570_10262105Not Available759Open in IMG/M
3300009512|Ga0115003_10238632All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae → Woeseiaceae bacterium1085Open in IMG/M
3300009526|Ga0115004_10375460All Organisms → cellular organisms → Bacteria → Proteobacteria842Open in IMG/M
3300017818|Ga0181565_10670210Not Available660Open in IMG/M
3300017818|Ga0181565_10806776Not Available589Open in IMG/M
3300017824|Ga0181552_10067874All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium2045Open in IMG/M
3300017824|Ga0181552_10190673Not Available1065Open in IMG/M
3300017824|Ga0181552_10539182All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae → Woeseiaceae bacterium547Open in IMG/M
3300017949|Ga0181584_10597599All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria668Open in IMG/M
3300017950|Ga0181607_10068655All Organisms → cellular organisms → Bacteria2325Open in IMG/M
3300017950|Ga0181607_10169784Not Available1307Open in IMG/M
3300017950|Ga0181607_10553157Not Available610Open in IMG/M
3300017950|Ga0181607_10575586All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium594Open in IMG/M
3300017956|Ga0181580_10971718Not Available527Open in IMG/M
3300017957|Ga0181571_10491845Not Available751Open in IMG/M
3300017962|Ga0181581_10866564Not Available535Open in IMG/M
3300017967|Ga0181590_10315482Not Available1133Open in IMG/M
3300018036|Ga0181600_10125499All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED441467Open in IMG/M
3300018041|Ga0181601_10023511All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED444682Open in IMG/M
3300018041|Ga0181601_10073393All Organisms → cellular organisms → Bacteria2303Open in IMG/M
3300018041|Ga0181601_10170895Not Available1307Open in IMG/M
3300018041|Ga0181601_10553148Not Available594Open in IMG/M
3300018048|Ga0181606_10096823All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae → Woeseiaceae bacterium1866Open in IMG/M
3300018048|Ga0181606_10156300Not Available1366Open in IMG/M
3300018048|Ga0181606_10272179All Organisms → cellular organisms → Bacteria947Open in IMG/M
3300018048|Ga0181606_10292754Not Available903Open in IMG/M
3300018048|Ga0181606_10444511All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium686Open in IMG/M
3300018049|Ga0181572_10443356All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae → Woeseiaceae bacterium806Open in IMG/M
3300018417|Ga0181558_10223336Not Available1066Open in IMG/M
3300018417|Ga0181558_10700105All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium516Open in IMG/M
3300018420|Ga0181563_10741078All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium541Open in IMG/M
3300018421|Ga0181592_10099343All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2263Open in IMG/M
3300018428|Ga0181568_11468801Not Available503Open in IMG/M
3300020053|Ga0181595_10143931All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae → Woeseiaceae bacterium1104Open in IMG/M
3300020165|Ga0206125_10021969All Organisms → cellular organisms → Bacteria3773Open in IMG/M
3300020165|Ga0206125_10023954All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium TMED2593539Open in IMG/M
3300020165|Ga0206125_10337385All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium557Open in IMG/M
3300020166|Ga0206128_1278765Not Available603Open in IMG/M
3300020173|Ga0181602_10074880All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae → Woeseiaceae bacterium1736Open in IMG/M
3300020178|Ga0181599_1053081All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae → Woeseiaceae bacterium2014Open in IMG/M
3300020182|Ga0206129_10027597Not Available4145Open in IMG/M
3300020185|Ga0206131_10033330All Organisms → cellular organisms → Bacteria3813Open in IMG/M
3300020187|Ga0206130_10011567All Organisms → cellular organisms → Bacteria8838Open in IMG/M
3300020187|Ga0206130_10107996Not Available1604Open in IMG/M
3300020191|Ga0181604_10072875All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae → Woeseiaceae bacterium1918Open in IMG/M
3300020191|Ga0181604_10085072All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1731Open in IMG/M
3300020413|Ga0211516_10138384Not Available1142Open in IMG/M
3300020442|Ga0211559_10226233All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria880Open in IMG/M
3300020463|Ga0211676_10032399All Organisms → cellular organisms → Bacteria3938Open in IMG/M
3300020468|Ga0211475_10222469Not Available942Open in IMG/M
3300020595|Ga0206126_10084953Not Available1598Open in IMG/M
3300021356|Ga0213858_10367504Not Available679Open in IMG/M
3300021375|Ga0213869_10155244Not Available1065Open in IMG/M
3300021389|Ga0213868_10182022All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1274Open in IMG/M
3300021389|Ga0213868_10286072Not Available950Open in IMG/M
3300021425|Ga0213866_10172143Not Available1137Open in IMG/M
3300022923|Ga0255783_10209793All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium870Open in IMG/M
3300022926|Ga0255753_1066867All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae → Woeseiaceae bacterium1930Open in IMG/M
3300022926|Ga0255753_1103053All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae → Woeseiaceae bacterium1394Open in IMG/M
3300022927|Ga0255769_10375464All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium549Open in IMG/M
3300022939|Ga0255754_10185032All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium1061Open in IMG/M
(restricted) 3300023109|Ga0233432_10088316All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae → Woeseiaceae bacterium1783Open in IMG/M
3300023110|Ga0255743_10063317All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2298Open in IMG/M
3300023119|Ga0255762_10537514All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae → Woeseiaceae bacterium540Open in IMG/M
3300023178|Ga0255759_10203587All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium1305Open in IMG/M
3300023273|Ga0255763_1237173Not Available689Open in IMG/M
(restricted) 3300024255|Ga0233438_10293055All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae → Woeseiaceae bacterium627Open in IMG/M
(restricted) 3300024264|Ga0233444_10403650Not Available564Open in IMG/M
3300024348|Ga0244776_10522158Not Available763Open in IMG/M
3300025621|Ga0209504_1000828All Organisms → cellular organisms → Bacteria25355Open in IMG/M
3300025704|Ga0209602_1175604Not Available660Open in IMG/M
3300025705|Ga0209374_1027804All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → environmental samples → uncultured delta proteobacterium HF4000_08N172367Open in IMG/M
3300025705|Ga0209374_1196793Not Available533Open in IMG/M
3300025828|Ga0208547_1121598All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae → Woeseiaceae bacterium775Open in IMG/M
3300025874|Ga0209533_1125851All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED441200Open in IMG/M
3300025880|Ga0209534_10168961Not Available1132Open in IMG/M
3300025880|Ga0209534_10306590All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED44728Open in IMG/M
3300025880|Ga0209534_10456917Not Available536Open in IMG/M
3300025886|Ga0209632_10500081Not Available555Open in IMG/M
3300025890|Ga0209631_10306282Not Available767Open in IMG/M
3300025892|Ga0209630_10391468All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae → Woeseiaceae bacterium604Open in IMG/M
3300025897|Ga0209425_10289306All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium827Open in IMG/M
3300026201|Ga0208127_1123789All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium646Open in IMG/M
3300027830|Ga0209359_10217518All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium859Open in IMG/M
3300028196|Ga0257114_1089502Not Available1272Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh37.93%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine9.48%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater7.76%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine6.90%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine6.90%
Marine Surface WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water6.03%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine5.17%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater4.31%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater2.59%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous2.59%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine1.72%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine1.72%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine1.72%
Marine PlanktonEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton0.86%
MarineEnvironmental → Aquatic → Marine → Inlet → Unclassified → Marine0.86%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.86%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water0.86%
EstuarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Estuarine0.86%
Macroalgal SurfaceHost-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface0.86%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000947Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY92Host-AssociatedOpen in IMG/M
3300001348Pelagic Microbial community sample from North Sea - COGITO 998_met_04EnvironmentalOpen in IMG/M
3300001352Pelagic Microbial community sample from North Sea - COGITO 998_met_07EnvironmentalOpen in IMG/M
3300001778Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM18, ROCA_DNA027_0.2um_3gEnvironmentalOpen in IMG/M
3300003474Estuarine microbial communities from the Sarno estuary, Gulf of Naples, Italy - Sample Station 4EnvironmentalOpen in IMG/M
3300004097Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaGEnvironmentalOpen in IMG/M
3300004279Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10mEnvironmentalOpen in IMG/M
3300005239Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of MaineEnvironmentalOpen in IMG/M
3300005510Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV45EnvironmentalOpen in IMG/M
3300005837Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18EnvironmentalOpen in IMG/M
3300006404Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006614Marine coastal surface water microbial communities in Port Hacking, Sydney, Australia ? TJ05 time pointEnvironmentalOpen in IMG/M
3300006621Marine coastal surface water microbial communities in Port Hacking, Sydney, Australia ? TJ07 time pointEnvironmentalOpen in IMG/M
3300007280Marine coastal surface water microbial communities in Port Hacking, Sydney, Australia ? TJ18 time pointEnvironmentalOpen in IMG/M
3300007862Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373A_0.2umEnvironmentalOpen in IMG/M
3300008012Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300008961Estuarine microbial communities from the Columbia River estuary - metaG 1550B-02EnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009076Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511EnvironmentalOpen in IMG/M
3300009132Combined Assembly of Gp0139359, Gp0139510EnvironmentalOpen in IMG/M
3300009436Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M MetagenomeEnvironmentalOpen in IMG/M
3300009496Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524EnvironmentalOpen in IMG/M
3300009512Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88EnvironmentalOpen in IMG/M
3300009526Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90EnvironmentalOpen in IMG/M
3300017818Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017824Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017949Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017950Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017956Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017957Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017962Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017967Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018036Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018041Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018048Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018049Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018417Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018420Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018421Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018428Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020053Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041401AS metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020165Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1EnvironmentalOpen in IMG/M
3300020166Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1EnvironmentalOpen in IMG/M
3300020173Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041408US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020178Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041405US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020182Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2EnvironmentalOpen in IMG/M
3300020185Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1EnvironmentalOpen in IMG/M
3300020187Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160512_1EnvironmentalOpen in IMG/M
3300020191Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041410US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020413Marine microbial communities from Tara Oceans - TARA_S200000501 (ERX555962-ERR599092)EnvironmentalOpen in IMG/M
3300020442Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)EnvironmentalOpen in IMG/M
3300020463Marine microbial communities from Tara Oceans - TARA_B100001057 (ERX555988-ERR599050)EnvironmentalOpen in IMG/M
3300020468Marine microbial communities from Tara Oceans - TARA_A100000164 (ERX555914-ERR598993)EnvironmentalOpen in IMG/M
3300020595Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160412_1EnvironmentalOpen in IMG/M
3300021356Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245EnvironmentalOpen in IMG/M
3300021375Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132EnvironmentalOpen in IMG/M
3300021389Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127EnvironmentalOpen in IMG/M
3300021425Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284EnvironmentalOpen in IMG/M
3300022923Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaGEnvironmentalOpen in IMG/M
3300022926Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaGEnvironmentalOpen in IMG/M
3300022927Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaGEnvironmentalOpen in IMG/M
3300022939Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaGEnvironmentalOpen in IMG/M
3300023109 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MGEnvironmentalOpen in IMG/M
3300023110Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaGEnvironmentalOpen in IMG/M
3300023119Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaGEnvironmentalOpen in IMG/M
3300023178Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaGEnvironmentalOpen in IMG/M
3300023273Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaGEnvironmentalOpen in IMG/M
3300024255 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MGEnvironmentalOpen in IMG/M
3300024264 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MGEnvironmentalOpen in IMG/M
33000243480.2um to 3um size fraction coassemblyEnvironmentalOpen in IMG/M
3300025621Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511 (SPAdes)EnvironmentalOpen in IMG/M
3300025704Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524 (SPAdes)EnvironmentalOpen in IMG/M
3300025705Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m (SPAdes)EnvironmentalOpen in IMG/M
3300025828Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025874Pelagic Microbial community sample from North Sea - COGITO 998_met_04 (SPAdes)EnvironmentalOpen in IMG/M
3300025880Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes)EnvironmentalOpen in IMG/M
3300025886Pelagic Microbial community sample from North Sea - COGITO 998_met_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025890Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)EnvironmentalOpen in IMG/M
3300025892Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025897Pelagic Microbial community sample from North Sea - COGITO 998_met_05 (SPAdes)EnvironmentalOpen in IMG/M
3300026201Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV45 (SPAdes)EnvironmentalOpen in IMG/M
3300027830Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Surface_A/KNORR_S2/LV (SPAdes)EnvironmentalOpen in IMG/M
3300028196Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_10mEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1001729123300000101MarineMDESRRNFILGMSSAYAALSVSAATGTSMILKGTNNTLEKKNINVSDWKFSSYDGFNAFSPALIGSAMSSFMLNNIDYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN*
DelMOSum2010_1003244553300000101MarineMHNGLMNPSRRNFILGMTSAYTVLSVSVFSGTSMVLKSSQNAIKETSIDVSDWNFSSYDAFSPALIGTAISSFMLSNVEYLYSLIIILITLFLLFAVGIPGYEYLLPYSELYFINS*
BBAY92_1005486223300000947Macroalgal SurfaceVHNIFMDESRRNFILGVSSAYAALSVSAATGTSMMLKSTNNVLEKKNINISDWKFSSYDGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLTTLFLLFAVGIPGYEYLLPYTEQYFIYN*
JGI20154J14316_10001652123300001348Pelagic MarineMDESRRNFILGMSSAYAALSVSAATGTSMILKSTNNVIEKKNINISDWKFSSYEGFDAFSPALIGSAMSSFMLNNIDYLYSIIIVLITLFLLFAIGIPGYEYLLPYTEQYFIYN*
JGI20157J14317_1012690923300001352Pelagic MarineMDESRRNFILGMSSAYAALSVSAATGTSMILKSTNNVIEKKNINISDWKFSSYEGFDAFSPALIGSAMSSFMLNNIDYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN*
ACM18_102766123300001778Marine PlanktonMDESRRNFILGMSSAYAALSVSAATGTSMMLKNTNNVLEKKNINISDWKFSSYEGFDALSPAMIGSALSSFMLNNIEDLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYS*
NAP4_101951923300003474EstuarineSSAYAALSVSAVTGTSMILKTTNNVIEKKNTNITDWKFSSYEGFDAFSPALIGSAISSFMLNNVEYLYSLIITLLTLLLLFTIGIPGYEYLLSYSDLYSITN*
Ga0055584_10093587013300004097Pelagic MarineMDESRRNFILGISSAYAALSVSAVTGTSMILKGTNNTLEKKNINVSDWKFSTYERFDAFSPALIGSAMSSFMLNNIDYLYSIIIVLITLFLL
Ga0066605_1003458123300004279MarineMHNIFMDESRRSFILGMSSAYAALSVSAATGTSMMLKSTNNVIEKKNINISDWKFSSYEGFDAFSPALIGSAMSSFMLNNIDYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN*
Ga0066605_1008330423300004279MarineMHNSQMDESRRKFIIGMSSACAVLSVSAVTGTSMMLKSTNNPLEKKNINVSDWKFSSYEGFNAFSPAIIGSALSSFMLNNIEYLYSIIIVLTALFLLFAVGIPGYEYLLPYTEQYFIYN*
Ga0073579_105075023300005239MarineMDESRRNFILGMSSAYAALSVSAATGTSMILKGTNNTLEKKNINVSDWKFSSYDGFNAFSPALIGSAMSSFMLNNIDYLYSIIIVLITLFLLFAIGIPGYEYLLPYTEQYFIYN*
Ga0073579_118768663300005239MarineMHNNFMDESRRNFILGMTSAYTALSISAATGTSMAFSHSHNAVKKVNADQLDWKFSSYDAFSSALIGASISSLMLNNIEYFYSLIIVFVTLFLLFTIGIPGYEYLITYS*
Ga0066825_1006805523300005510MarineMDKSRRNFILGMSSACAAISVSASTGTSLMLKSTNNALEKKNINISDWKFSSYEGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLLAVGIPGYEYLLPYTEQYFIYS*
Ga0078893_1070654623300005837Marine Surface WaterMDESRRSFILGMSSAYAALSVSAATGTSMMLKSTNNVLEKKNINISDWKFSSYDGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYS*
Ga0078893_1081632123300005837Marine Surface WaterMDESRRNFILGMSSAYAALSVSAATGTSIMLKSTNNVLEKKNINISDWKFSSYDGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYD*
Ga0078893_1172533323300005837Marine Surface WaterMDESRRNFILGMSSAYAALSVSAATGTSMMLKSTNNVLEKKNINISDWKFSSYDGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLFAVGIPGYEYL
Ga0078893_1204399823300005837Marine Surface WaterMHNGLMNPSRRNFILGMSSAYTVLSVSVFTGTSMVLKSSQNSIKETSIDVSDWNFSSYDAFSPALMGTAISSFMLSNVEYLYSLIIILITLFLLFAVGIPGYEYLLPYSELYFINS*
Ga0075515_1064030713300006404AqueousSRRNFILGISSAYAALSVSAATGTSMMLKSTNNVLEKKNINISDWKSSSIDVFDAFSPAMIGSALSYFMLNNIEYLYSTIIVLITLFLLLVVGIPGYEYLLPFTEQYFIYN*
Ga0101439_11471333300006614Marine Surface WaterMDESRRNFILGMSSAYAALSVSAATGTSIMLKSTNNVLEKKNINISDWKFSSYDGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYS*
Ga0101441_12601713300006621Marine Surface WaterMDGSRRDFILGISSAYAALSVSAATGTSMMLKSTNNVLEKKNINISDWKSSSLDVFDAFSPAMIGSALSYFMLNNIEYLYSIIIVLMTLFLLFAVGIPGYEYLLPYTEQYFLYNQ*
Ga0101452_12350223300007280Marine Surface WaterMDESRRNFILGISSAYAALTVSAATGTSMILKSTNNVLEKKTINISDWKFSSHDVFDAFSPAMIGSALSYFMLNNIEYLYSIMIVLMTLFLLFAVGIPGYEYLLPYTEQYFIYN*
Ga0105737_111980123300007862Estuary WaterMTSAYTVLSVSVFTGTSMVLKSSQNTIKETSIDVSDWNFSSYDAFSPALIGTAISSFMLSNIEYLYSLIIILITLFLLFAVGIPGYEYLLPYSELYFINS*
Ga0075480_1013025423300008012AqueousMDESRRNFILGMSSAYAALSVSAATGTSMMLKSTNNVLEKKNINISDWKFSSYDGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN*
Ga0102887_115572123300008961EstuarineMDDSRRNFILGMSSAYAAISVSAATGTSMMLKSTNNVIEKKNINISDWKFSSYEGFDAFSPALIGSAMSSFMLNNIDYLYSIIIVLITLFLLFVVGIPGYEYLLPYTEQYFIYN*
Ga0115566_1033292533300009071Pelagic MarineMDESRRNFILGMSSAYAALSVSAATGTSMILKGTNNTLKKKSINVSDWKFSTYEGFDAFSPALIGSAISSFMLNNIDYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN*
Ga0115566_1057560423300009071Pelagic MarineMDESRRSFILGVSSAYAALSVSAATGTSMMLKSTNNILEKKNINISDWKSSSHDAVDAFSPAMIGSALSYFMLNNIEYLYSITIVLMTLFLLFAVGIPGYEYLLPYTEQYFIYN*
Ga0115550_113158123300009076Pelagic MarineMNESRRNFILGMSSAYAALSVSAATGTSMILKGTNNTLEKKNINVSDWKFSSYDGFDAFSPALIGSAMSSFMLNNIDYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN*
Ga0115550_124053413300009076Pelagic MarineMDESRRNFILGMSSAYAALSVSAAKGTSMMLKSTNNVLEKKNINISDWKFSSYDGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYS*
Ga0118730_130138923300009132MarineMDESRRNFILGISSAYAALSVSAATGPSMMFKSTNNVLEKKNINISDWKFSSYDGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLFVVGIPGYEYLLPYTEQYFIYN*
Ga0115008_1093523213300009436MarineMDESRRNFILGMSSAYAALSVSAATGTSMILKSTNNVIEKKNINISDWKFSSYEGFDAFSPALIGSAMSSFMLNNIEYLYSLIIVLVTLFLLFAVGIPGYEYLLPYTEQYFIYN*
Ga0115570_1014662213300009496Pelagic MarineMDESRRKFIIGMSSACAALSVSAVTGTSMMLKSTNNPLEKKNINVSDWKFSSYEGFNAFSPAIIGSALSSFMLNNIEYLYSIIIVLTALFLLFAVGIPGYEYLLPYTEQYFIYN*
Ga0115570_1026210533300009496Pelagic MarineATGTSMILKSTNNVIEKKNINISDWKFSSYEGFDAFSPALIGSAMSSFMLNNIDYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN*
Ga0115003_1023863223300009512MarineMDESRRNFILGMTSAYTALSVSAIAGTGMIVKNLDKAPKIKSINASDGKFSSYDAFSPALIGSAVSALVLNNIEYLYSLIIILMTLFLLFTIGIPGYEYLLPYSEQYFLSY*
Ga0115004_1037546013300009526MarineMDESRRNFILGMTSAYTALSVSAIAGTGMIVKNLDKAPKIKSINASDWKFSSYDAFSPALIGSAVSALVLNNIEYLYSLIIILMTLFLLFTIGIPGYEYLLPYSEQYF
Ga0181565_1067021013300017818Salt MarshMDESRRNFILGMSSAYAALSVSAATGTSMMLKSTNNALEKKNINISDWKFSSYDGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLFAVGIPGYEYLLPYT
Ga0181565_1080677613300017818Salt MarshMDKSRRNFILGMSSACAALSVSASTGTSLMLKNTNNDLEKKNINISDWKFSSYEGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLLAVGIPGYEYLLPYTEQY
Ga0181552_1006787423300017824Salt MarshVDESRRNFILGVSSAYAALSVSAVTGTSMILKTTNNVIEKKNANITDWKFSSYEGFDAFSPALIGSAISSFMLNNIEYLYSLIITLLTLLLLFTIGIPGYEYLLSYSELYSITN
Ga0181552_1019067313300017824Salt MarshMSQKDMDESRRNFILGMSSAYAALSVSAVTGTSMMLKSTNNVLEKKNINISDWKFSSYDGFDALSPAIIGSAISAFALNNIEYIYSIMLILITIFLLLTAGIPGYEYLLDYSALFHMSN
Ga0181552_1053918223300017824Salt MarshMDKSRRNFILGMSSAYAALSVSASTGTSLMLKSTNNALEKKNINISDWKFSSYEGFDAFSPAIIGSALSSFMLNNIEYLYSIIIVLITLFLLLAVGIPGYEYLLPYTEQYFIYN
Ga0181584_1059759913300017949Salt MarshMSSAYAALSVSAATGTSMMLKSTNNVLEKKNINISDWKFSSYDGFDALSAAMIGSALSSFMLNNIEYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN
Ga0181607_1006865513300017950Salt MarshMNKSRRNFILGMSSAYAALSVSAATGTSMMLKSTNNVLEKKNINISDWKFSSYDGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFLYS
Ga0181607_1016978423300017950Salt MarshMDESRRNFILGISSAYAALSVSAATGTSMMLKSTNNVLEKKNINISDWKFSSYDGFDAMSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN
Ga0181607_1055315713300017950Salt MarshMDKSRRNFILGMSSACAALSVSASTGTSLMLKSTNNALEKKNINISDWKFSSYEGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLFTLGIPGYEYLLPYTEQYFIYN
Ga0181607_1057558623300017950Salt MarshMDESRRKFILGMSSAYAALSVSASTGTSLMLKSTNNALEKKNINISDWKFSSYEGFDAFSPAIIGSALSSFMLNNIEYLYSIIIVLITLFLLLAVGIPGYEYLLPYTEQYFIYN
Ga0181580_1097171813300017956Salt MarshMDESRRNFILGMSSAYTALSVSAATGTSMMLKSTNNVLEKKNINISDWKFSSYDGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYS
Ga0181571_1049184513300017957Salt MarshMDKSRRNFILGMSSACAALSVSASTGTSLMLKSTNNALEKKNINISDWKFSSYEGFDVLSPAMIGSALSSFMLNNIEYIYSIIIVFITLFLLLAVGIPGYEY
Ga0181581_1086656413300017962Salt MarshMDESRRNFILGMSSAYAALSVSAATGTSMMLKSTNNVLEKKNINISDWKFSSYDGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYS
Ga0181590_1031548233300017967Salt MarshMDESRRKFILGMSSAYAALSVSASTGTSLMLKSTNNALEKKNINISDWKFSSYEGFDALSPAMIGSVLSSFMLNNIEYLYSIIIVLITLFLLFT
Ga0181600_1012549923300018036Salt MarshMDESRRNFILGMSSAYAALSVSAATGTSMMLKSTNNVLEKKNINISDWKFSSYDGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN
Ga0181601_1002351123300018041Salt MarshMDESRRNFILGMSSAYAALSVSAATGTSMMLKSTNNVLEKKNINISDWKFSSYDGFDALSPAMIGSALSSFMLNNIEYLYSIIIVFITLFLLFAVGIPGYEYLLPYTEQYFIYN
Ga0181601_1007339313300018041Salt MarshMNKSRRNFILGMSSAYAALSVSAATGTSMMLKSTNNVLEKKNINISDWKFSSYDGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLFAVGIPGYEY
Ga0181601_1017089523300018041Salt MarshMDESRRNFILGMSSAYTALSVSAATGTSMMLKSTNNVLEKKNINISDWKFSSYDGFDAMSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN
Ga0181601_1055314813300018041Salt MarshMDESRRNFILGVSSAYAALSVSAATGTSMMLKSTNNVLEKKNINISDWKFSSYDGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLFTLGIPGYEYLLPYTEQYFIYN
Ga0181606_1009682343300018048Salt MarshTALSVSAATGTSMMLKSTNNVLEKKNINVYDWKFSSYDGFDASSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN
Ga0181606_1015630013300018048Salt MarshMDESRRNFILGVSSAYAALSVSAATGTSIILKSTNNVLEKKNINISDWKFSSYDGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLL
Ga0181606_1027217923300018048Salt MarshMSQKDMDESRRNFILGMSSAYAALSVSAVTGTSMMLKSTNNVLEKKNINISDWKFSSYDGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN
Ga0181606_1029275413300018048Salt MarshMNKSRRNFILGMSSAYAALSVSAATGTSMMLKNTNNVLEKKNINISDWKFSSYDGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLL
Ga0181606_1044451123300018048Salt MarshMHNSHMDESRRNFILGISSAYAALSVSAVTGTSMILKTTNNVIEKKNANITDWKFSSYEGFDAFSPALIGSAISSFMLNNVEYLYSLIITLLTLLLLFTIGIPGYEYLLSYSELYSITN
Ga0181572_1044335613300018049Salt MarshMDESRRNFILGMSSAYAALSVSAAIGTSMMLKSTNNVLEKKNINISDWKFSSYDGFDALSPAMIGSALSSFMLSNIEYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN
Ga0181558_1022333613300018417Salt MarshDESRRNFILGMSSAYAALSVSAVTGTSMILKTTNNVIEKKNANITDWKFSSYEGFDAFSPALIGSAISSFMLNNIEYLYSLIITLLTLLLLFTIGIPGYEYLLSYSELYSITN
Ga0181558_1070010523300018417Salt MarshMDESRRNFILGMSSAYTALSVSAATGTSMMLKSTNNVLEKKNINISDWKFSSYDGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLLAVGIPGYEYLLPYTEQYFIYN
Ga0181563_1074107813300018420Salt MarshRRNFILGVSSAYAALSVSAVTGTSMILKTTNNVIEKKNANITDWKFSSYEGFDAFSPALIGSAISSFMLNNIEYLYSLIITLLTLLLLFTIGIPGYEYLLSYSELYSITN
Ga0181592_1009934323300018421Salt MarshMDESRRKFILGMSSAYAALSVSASTGTSLMLKSTNNALEKKNINISDWKFSSYEGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLFTLGIPGYEYLLPYTEQYFIYN
Ga0181568_1146880123300018428Salt MarshYAALSVSAVTGTSMMLKSTNNALEKKNINISDWKFSSYDGFDALSPAIIGSAISAFAINNIEYIYSIMLILITIFLLLTAGIPGYEYLLDYSAFFHMSN
Ga0181595_1014393123300020053Salt MarshISSAYAALSVSAATGTSMMLKSTNNVLEKKNINVSDWKFSSYDGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN
Ga0206125_1002196923300020165SeawaterMDESRRNFILGMSSAYAALSVSAATGTSMILKGTNNTLEKKNINVSDWKFSSYDGFNAFSPALIGSAMSSFMLNNIDYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN
Ga0206125_1002395423300020165SeawaterMDESRRKFIIGMSSACAALSVSAVTGTSMMLKSTNNPLEKKNINVSDWKFSSYEGFNAFSPAIIGSALSSFMLNNIEYLYSIIIVLTALFLLFAVGIPGYEYLLPYTEQYFIYN
Ga0206125_1033738523300020165SeawaterMHNGLMNPSRRNFILGMSSAYTVLSVSVFTGTSMVLKSSQNSIKETSIDVSDWNFSSYDAFSPALMGTAISSFMLSNVEYLYSLIIILITLFLLFAVGIPGYEYLLPYSELYFINS
Ga0206128_127876523300020166SeawaterMHNSQMDESRRNFILGMSSAYAALSVSAATGTSMMLKSTNNVLEKKNINISDWKFSSYDGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLTTLFLLFAV
Ga0181602_1007488023300020173Salt MarshMDESRRNFILGMSSAYTALSVSAATGTSMMLKSTNNVLEKKNINVSDWKFSSYDGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN
Ga0181599_105308143300020178Salt MarshMDESRRNFILGMSSAYAALSVSAVTGTSMMLKSTNNALEKKNINISDWKFSSYDGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN
Ga0206129_1002759753300020182SeawaterMNESRRNFILGMSSAYAALSVSAVTGTSMILKGTNNTLEKKNINVSDWKFSSYDGFNAFSPALIGSAMSSFMLNNIDYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN
Ga0206131_1003333013300020185SeawaterMNESRRNFILGMSSAYAALSVSAVTGTSMILKGTNNTLEKKNINVSDWKFSSYDGFNAFSPALIGSAMSSFMLNNIDYLYSIIIVLITLFLLFAVGIPGYE
Ga0206130_1001156733300020187SeawaterMNESRRNFILGMSSAYAVLSVSAATGTSMILKGTNNTLEKKNINVSDWKFSSYDGFNAFSPALIGSAMSSFMLNNIDYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN
Ga0206130_1010799633300020187SeawaterMDNSRRKFILGMSSAYAALSVSAATGTSMILKSTNNVIEKKNINISDWKFSSYEGFDAFSPALIGSAMSSFMLNNIDYLYSIIIVLITLFLLFAVGIPGYE
Ga0181604_1007287543300020191Salt MarshESRRNFILGISSAYAALSVSAATGTSMMLKSTNNVLEKKNINVSDWKFSSYDGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN
Ga0181604_1008507233300020191Salt MarshMDESRRNFILGMSSAYAALSVSAATGTSMMLKSTNNVLEKKNINISDWKFSSYDGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIY
Ga0211516_1013838413300020413MarineRNFILGMSSAYAALSVSAATGTSMILKGTNNTLEKKNINVSDWKFSSYDGFDAFSPALIGSAMSSFMLNNIDYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN
Ga0211559_1022623323300020442MarineLGMSSAYAALSVSAVTGTSMILKSTNNVLEKKNINVSDWKFSSYEGFNTFSPAMIGSGLTYFMLNNIEDLYPIIIAFITFFLLFAIGIPGYEYLLPHTEQYFIYN
Ga0211676_1003239923300020463MarineMDESRRNFILGMSSAYAALSVSAVTGTSMILKSTNNTLEKKNINVSDWKFSSYDGFDAFSPALIGSAISSFMLNNIDYLYSIIIALITFFLLFAVGIPGYEYLLPYTEQYFIYN
Ga0211475_1022246913300020468MarineMDESRRNFILGMSSAYAALSVSAATGTSMILKGTNNTLEKKNINVSDWKFSSYDGFDAFSPALIGSAMSSFMLNNIDYLYSIIIVLITLFLLFAVGIPGYEY
Ga0206126_1008495323300020595SeawaterMHNGLMNPSRRNFILGMSSAYTVLSVSVFTGTSMVLKSSQNSIKETSIDVSDWNFSSYDAFSPALMGTAISSFMLSNVEYLYSLIIILITLFLLFAVGIPGYEYLLPYSE
Ga0213858_1036750423300021356SeawaterMDESRRKFILGMSSAYAALSVSASTGTSLMLKSTNNALVKKNINISDWKFSSYEGFDAFSPAIIGSALSSFMLNNIEYLYSIIIVLITLFLLLAVGIPGYEYLL
Ga0213869_1015524413300021375SeawaterMDESRRNFILGMTSAYAALSVSAATGTSMMLKSTNNVLEKKNINVSDWKFSSYDGFDVLSPAMIGSALSSFMLNNIEYLYSIIIVLITLILLFVVGIPGYEYLLPFTEQYFIYS
Ga0213868_1018202223300021389SeawaterMDESRRNFILGVSSAYAALSVSAATGTSMMLKSTNNALEKKSINISDWKFSSYEGFDAFSPAMIGSALSSFMLNNIEYLYSTIIVLITLFLLLVVGIPGYEYLLPFTEQYFIYN
Ga0213868_1028607213300021389SeawaterYLIFSWNYFNCCYYSVMDESRRNFILGMSSAYAALSVSAATGTSMMLKSTNNALVKKNINVSDWKFSSYEGFDAFSPAIIGSVLSSFMLNNIDYLYSIIIVLITFFLLFAVGIPGYEYLLPYTEQYFIYN
Ga0213866_1017214323300021425SeawaterMDESRRNFILGMSSAYAALSVSAVTGTSMMLKSTNNVLEKKNINISDWKFSSYDGFDALSPAIIGSAISAFALNNIEYIYSIMLILITIFLLLTAGIPGYEYLLDYSAF
Ga0255783_1020979313300022923Salt MarshGVSSAYAALSVSAVTGTSMILKTTNNVIEKKNANITDWKFSSYEGFDAFSPALIGSAISSFMLNNIEYLYSLIITLLTLLLLFTIGIPGYEYLLSYSELYSITN
Ga0255753_106686743300022926Salt MarshFILGMSSAYTALSVSAATGTSMMLKSTNNVLEKKNINVSDWKFSSYDGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN
Ga0255753_110305313300022926Salt MarshSAYAALSVSAVTGTSMMLKSTNNVLEKKNINISDWKFSSYDGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN
Ga0255769_1037546413300022927Salt MarshRLWLTASKYXLKSNVLRKLNNMDESRRKFILGMSSAYAALSVSASTGTSLMLKSTNNALEKKNINISDWKFSSYEGFDAFSPAIIGSALSSFMLNNIEYLYSIIIVLITLFLLLAVGIPGYEYLLPYTEQYFIYN
Ga0255754_1018503223300022939Salt MarshMDKSRRNFILGMSSACAALSVSASTGTSLMLKNTNNDLEKKNINISDWKFSSYEGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLLAVGIPGYEYLLPYTEQYFIYS
(restricted) Ga0233432_1008831623300023109SeawaterMDESRRNFILGMSSAYAALSVSAATGTSMMLKSTNNVIEKKNINISDWKFSSYEGFDAFSPALIGSAMSSFMLNNIDYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN
Ga0255743_1006331733300023110Salt MarshMDKSRRNFILGMSSACAALSVSASTGTSLMLKNTNNDLEKKNINISDWKFSSYEGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLFTLGIPGYEYLLPYTEQYFIYN
Ga0255762_1053751413300023119Salt MarshMDESRRNFILGMSSAYAALSVSAVTGTSMMLKSTNNVLEKKNINISDWKFSSYDGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN
Ga0255759_1020358723300023178Salt MarshMDKSRRNFILGMSSACAALSVSASTGTSLMLKNTNNDLEKKNINISDWKFSSYEGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLLAVGIPGYEYLLPYTEQYFIYN
Ga0255763_123717333300023273Salt MarshESRRNFILGMSSAYTALSVSAATGTSMMLKSTNNVLEKKNINISDWKFSSYDGFDAMSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN
(restricted) Ga0233438_1029305523300024255SeawaterIMHNIFMDESRRNFILGMSSAYAALSVSAATGTSMMLKSTNNVIEKKNINISDWKFSSYEGFDAFSPALIGSAMSSFMLNNIDYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN
(restricted) Ga0233444_1040365013300024264SeawaterMDESRRNFILGVSSAYAALSVSAATGTSMMLKNSNNVLEKKNINISDWKFSSYDGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN
Ga0244776_1052215813300024348EstuarineMDESRRNFILGMSSAYAALSVSAATGTSMMLKSTNNVIEKKNINISDWKFSSYEGFDAFSPALIGSAMSSFMLNNIDYLYSIIIVLITLFLLFAIGIPGYEY
Ga0209504_1000828193300025621Pelagic MarineMDESRRNFILGMSSAYAALSVSAATGTSMILKSTNNVIEKKNINISDWKFSSYEGFDAFSPALIGSAMSSFMLNNIDYLYSIIIVLITLFLLFAIGIPGYEYLLPYTEQYFIYN
Ga0209602_117560423300025704Pelagic MarineMHNSQMDESRRKFILGMSSAYVALSVSAATGTSMILKSTNNVIEKKNINISDWKFSSYEGFDAFSPALIGSAMSSFMLNNIDYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN
Ga0209374_102780463300025705MarineMHNSQMDESRRKFILGMSSAYVALSVSAATGTSMILKSTNNVIEKKNINISDWKFSTYEGFDAFSPALIGSAISSFMLNNIDYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN
Ga0209374_119679313300025705MarineMHNSQMDESRRKFIIGMSSACAVLSVSAVTGTSMMLKSTNNPLEKKNINVSDWKFSSYEGFNAFSPAIIGSALSSFMLNNIEYLYSIIIVLTALFLLFAVGIPGYEYLLPYTEQYFIYN
Ga0208547_112159813300025828AqueousILGMSSAYAALSVSAATGTSMMLKSTNNVLEKKNINISDWKFSSYDGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN
Ga0209533_112585113300025874Pelagic MarineMDESRRNFILGMSSAYAALSVSAATGTSMIFKGTNNTLEKKNINVSDWKFSSYDGFDAFSPALIGSAMSSFMLNNIDYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN
Ga0209534_1016896123300025880Pelagic MarineMDESRRNFILGMSSAYAALSVSAATGTSMILKSTNNVIEKKNINISDWKFSSYEGFDAFSPALIGSAMSSFMLNNIDYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN
Ga0209534_1030659013300025880Pelagic MarineSAYAALSVSAATGTSMIFKGTNNTLEKKNINVSDWKFSSYDGFDAFSPALIGSAMSSFMLNNIDYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN
Ga0209534_1045691713300025880Pelagic MarineDESRRNFILGMSSAYAALSVSAATGTSMMLKSTNNVLEKKNINVSDWKFSSYDGFDVLSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN
Ga0209632_1050008123300025886Pelagic MarineYLLLLILLIFMDNSRRKFILGMSSAYAALSVSAATGTSMILKSTNNVIEKKNINISDWKFSSYEGFDAFSPALIGSAMSSFMLNNIDYLYSIIIVLITLFLLFAIGIPGYEYLLPYTEQYFIYN
Ga0209631_1030628223300025890Pelagic MarineMHNSQMDESRRKFILGMSSAYVALSVSAATGTSMILKSTNNVIEKKNINISDWKFSSYEGFDAFSPALIGSAMSSFMLNNIDYLYSIIIVLITLFLLFAI
Ga0209630_1039146813300025892Pelagic MarineMDNSRRKFILGMSSAYAALSVSAATGTSMILKSTNNVIEKKNINISDWKFSSYEGFDAFSPALIGSAMSSFMLNNIDYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN
Ga0209425_1028930623300025897Pelagic MarineMHNGLMNPSRRNFILGMTSAYTVLSVSVFTGTSMVLKSSQNSIKETSIDVSDWNFSSYDAFSPALMGTAISSFMLSNVEYLYSLIIILITLFLLFAVGIPGYEYLLPYSELYFINS
Ga0208127_112378913300026201MarineMDKSRRNFILGMSSACAAISVSASTGTSLMLKSTNNALEKKNINISDWKFSSYEGFDALSPAMIGSALSSFMLNNIEYLYSIIIVLITLFLLLAVGIPGYEYLLPYTEQYFIYS
Ga0209359_1021751823300027830MarineMHNSHMDESRRNFILGISSAYAALSVSAVTGTSMILKTTNNVIEKKNTNITDWKFSSYEGFDAFSPALIGSAISSFMLNNVEYLYSLIITLLTLLLLFTIGIPGYEYLLSYSDLYSITN
Ga0257114_108950213300028196MarineMHNIFMDESRRNFILGMSSAYAALSVSAATGTSMMLKSTNNVIEKKNINISDWKFSSYEGFDAFSPALIGSAMSSFMLNNIDYLYSIIIVLITLFLLFAVGIPGYEYLLPYTEQYFIYN


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.