NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F078908

Metagenome / Metatranscriptome Family F078908

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F078908
Family Type Metagenome / Metatranscriptome
Number of Sequences 116
Average Sequence Length 64 residues
Representative Sequence MTYGHSTRVSAVNALTQRALDRASGTWGGYQAWRQLDPEKRLQLVEQALATPANDIIDDFPLAL
Number of Associated Samples 91
Number of Associated Scaffolds 116

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 82.76 %
% of genes near scaffold ends (potentially truncated) 21.55 %
% of genes from short scaffolds (< 2000 bps) 87.07 %
Associated GOLD sequencing projects 80
AlphaFold2 3D model prediction Yes
3D model pTM-score0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (63.793 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(17.241 % of family members)
Environment Ontology (ENVO) Unclassified
(34.483 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(62.931 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 48.91%    β-sheet: 0.00%    Coil/Unstructured: 51.09%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.33
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 116 Family Scaffolds
PF00126HTH_1 26.72
PF03466LysR_substrate 18.10
PF01259SAICAR_synt 15.52
PF00270DEAD 0.86
PF06718DUF1203 0.86
PF14257DUF4349 0.86
PF00271Helicase_C 0.86
PF13439Glyco_transf_4 0.86
PF03781FGE-sulfatase 0.86

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 116 Family Scaffolds
COG0152Phosphoribosylaminoimidazole-succinocarboxamide synthaseNucleotide transport and metabolism [F] 15.52
COG1262Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domainPosttranslational modification, protein turnover, chaperones [O] 0.86


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms63.79 %
UnclassifiedrootN/A36.21 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001989|JGI24739J22299_10095261All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.902Open in IMG/M
3300002568|C688J35102_118550307All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas segetis571Open in IMG/M
3300002568|C688J35102_120963816All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00073347Open in IMG/M
3300003848|Ga0058694_1013681All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1617Open in IMG/M
3300004081|Ga0063454_101971569Not Available515Open in IMG/M
3300005171|Ga0066677_10464083All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas segetis726Open in IMG/M
3300005177|Ga0066690_10255721Not Available1176Open in IMG/M
3300005179|Ga0066684_10705962All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.675Open in IMG/M
3300005179|Ga0066684_10937239Not Available563Open in IMG/M
3300005181|Ga0066678_10818046All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. RG327615Open in IMG/M
3300005187|Ga0066675_11454464Not Available501Open in IMG/M
3300005327|Ga0070658_10063866All Organisms → cellular organisms → Bacteria3003Open in IMG/M
3300005328|Ga0070676_10573283All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas811Open in IMG/M
3300005330|Ga0070690_100878673All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.700Open in IMG/M
3300005331|Ga0070670_100967106All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.773Open in IMG/M
3300005335|Ga0070666_10053713All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas2718Open in IMG/M
3300005339|Ga0070660_100347271All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.1221Open in IMG/M
3300005340|Ga0070689_101976210All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas533Open in IMG/M
3300005341|Ga0070691_10263910All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.928Open in IMG/M
3300005345|Ga0070692_10123830All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1445Open in IMG/M
3300005355|Ga0070671_100600825Not Available951Open in IMG/M
3300005356|Ga0070674_100073181All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas2429Open in IMG/M
3300005366|Ga0070659_100015477All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00075714Open in IMG/M
3300005366|Ga0070659_100931083Not Available760Open in IMG/M
3300005367|Ga0070667_100505002All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00071109Open in IMG/M
3300005440|Ga0070705_100193563All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.1388Open in IMG/M
3300005444|Ga0070694_100777669All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.783Open in IMG/M
3300005454|Ga0066687_10749240All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas segetis581Open in IMG/M
3300005454|Ga0066687_10751856All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria580Open in IMG/M
3300005467|Ga0070706_100691474All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.946Open in IMG/M
3300005530|Ga0070679_101341073Not Available661Open in IMG/M
3300005557|Ga0066704_10484162All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas816Open in IMG/M
3300005558|Ga0066698_10357119All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.1009Open in IMG/M
3300005561|Ga0066699_11133837Not Available538Open in IMG/M
3300005575|Ga0066702_10629320All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas642Open in IMG/M
3300005576|Ga0066708_10300177Not Available1028Open in IMG/M
3300005598|Ga0066706_11022316All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. RG327636Open in IMG/M
3300005616|Ga0068852_101650569All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. RG327663Open in IMG/M
3300005617|Ga0068859_100334132All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1609Open in IMG/M
3300005719|Ga0068861_102521905Not Available518Open in IMG/M
3300005842|Ga0068858_101823778Not Available601Open in IMG/M
3300006032|Ga0066696_10161928All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.1403Open in IMG/M
3300006032|Ga0066696_10649600Not Available681Open in IMG/M
3300006032|Ga0066696_11119091Not Available501Open in IMG/M
3300006195|Ga0075366_10406761All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.838Open in IMG/M
3300006353|Ga0075370_10651755All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.639Open in IMG/M
3300006800|Ga0066660_11346427Not Available559Open in IMG/M
3300006844|Ga0075428_102098004All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas585Open in IMG/M
3300006845|Ga0075421_101594176All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.710Open in IMG/M
3300009012|Ga0066710_100281047All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas2426Open in IMG/M
3300009012|Ga0066710_102943512Not Available666Open in IMG/M
3300009137|Ga0066709_104309832Not Available519Open in IMG/M
3300009148|Ga0105243_11260781Not Available755Open in IMG/M
3300009174|Ga0105241_10096333All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00072344Open in IMG/M
3300009551|Ga0105238_12139162All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas594Open in IMG/M
3300010145|Ga0126321_1299794All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas segetis500Open in IMG/M
3300010326|Ga0134065_10084177All Organisms → cellular organisms → Bacteria1033Open in IMG/M
3300010337|Ga0134062_10460682Not Available633Open in IMG/M
3300011119|Ga0105246_10084142All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales2275Open in IMG/M
3300012200|Ga0137382_10493276All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.869Open in IMG/M
3300012210|Ga0137378_10614883All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.997Open in IMG/M
3300012212|Ga0150985_107573313Not Available523Open in IMG/M
3300012212|Ga0150985_107921965Not Available654Open in IMG/M
3300012212|Ga0150985_109279719All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas segetis1559Open in IMG/M
3300012212|Ga0150985_109383770All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas segetis556Open in IMG/M
3300012212|Ga0150985_112079208All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas segetis654Open in IMG/M
3300012350|Ga0137372_10509152Not Available895Open in IMG/M
3300012357|Ga0137384_10166077All Organisms → cellular organisms → Bacteria1847Open in IMG/M
3300012469|Ga0150984_101126105All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas segetis620Open in IMG/M
3300012469|Ga0150984_107280018Not Available723Open in IMG/M
3300012469|Ga0150984_109987525All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas segetis705Open in IMG/M
3300012469|Ga0150984_114748069Not Available583Open in IMG/M
3300012469|Ga0150984_119746805Not Available509Open in IMG/M
3300012469|Ga0150984_122623520All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas segetis664Open in IMG/M
3300012977|Ga0134087_10773976Not Available517Open in IMG/M
3300013100|Ga0157373_10353485All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1048Open in IMG/M
3300013100|Ga0157373_10457325Not Available919Open in IMG/M
3300013100|Ga0157373_10959090Not Available637Open in IMG/M
3300013307|Ga0157372_12632216All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas577Open in IMG/M
3300014150|Ga0134081_10154817All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300014150|Ga0134081_10416401Not Available507Open in IMG/M
3300014487|Ga0182000_10240525Not Available720Open in IMG/M
3300015371|Ga0132258_10488221All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales3078Open in IMG/M
3300015371|Ga0132258_10714705All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00072523Open in IMG/M
3300015372|Ga0132256_100196982All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00072059Open in IMG/M
3300015373|Ga0132257_100539562Not Available1435Open in IMG/M
3300015373|Ga0132257_102721093Not Available644Open in IMG/M
3300015373|Ga0132257_104494186All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas508Open in IMG/M
3300018431|Ga0066655_11140194Not Available548Open in IMG/M
3300018468|Ga0066662_12580304Not Available536Open in IMG/M
3300018482|Ga0066669_11316560Not Available654Open in IMG/M
3300019878|Ga0193715_1036142All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00571069Open in IMG/M
3300019888|Ga0193751_1002718All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas10655Open in IMG/M
3300025711|Ga0207696_1118375All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.715Open in IMG/M
3300025900|Ga0207710_10109720All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00071309Open in IMG/M
3300025901|Ga0207688_10057739All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00072182Open in IMG/M
3300025901|Ga0207688_10088555Not Available1775Open in IMG/M
3300025903|Ga0207680_10913275Not Available629Open in IMG/M
3300025904|Ga0207647_10679982Not Available562Open in IMG/M
3300025907|Ga0207645_10137893All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00071589Open in IMG/M
3300025909|Ga0207705_10053583All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas2906Open in IMG/M
3300025919|Ga0207657_10316074All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1235Open in IMG/M
3300025931|Ga0207644_10507479All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas daechungensis995Open in IMG/M
3300025934|Ga0207686_11075107Not Available655Open in IMG/M
3300025960|Ga0207651_10232913All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1496Open in IMG/M
3300025972|Ga0207668_11778021All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas segetis556Open in IMG/M
3300025986|Ga0207658_11224484All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria686Open in IMG/M
3300026023|Ga0207677_10156601All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00571765Open in IMG/M
3300026322|Ga0209687_1258681Not Available542Open in IMG/M
3300026550|Ga0209474_10142385Not Available1569Open in IMG/M
3300026550|Ga0209474_10238932All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1129Open in IMG/M
3300027766|Ga0209796_10082508Not Available981Open in IMG/M
3300027766|Ga0209796_10185266All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas segetis658Open in IMG/M
3300027907|Ga0207428_10697846All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0007726Open in IMG/M
3300027909|Ga0209382_11264893Not Available750Open in IMG/M
3300030511|Ga0268241_10000228All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas8737Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil17.24%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere7.76%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.17%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere5.17%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere5.17%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil4.31%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.31%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere4.31%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere4.31%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.45%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil3.45%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.45%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere3.45%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.59%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.59%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.59%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.59%
AgaveHost-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave2.59%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.72%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.72%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.72%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere1.72%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.72%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.72%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.86%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.86%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.86%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.86%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001989Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5Host-AssociatedOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003848Agave microbial communities from Guanajuato, Mexico - Or.Sf.rzHost-AssociatedOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006195Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1Host-AssociatedOpen in IMG/M
3300006353Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5Host-AssociatedOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010145Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014487Bulk soil microbial communities from Mexico - Magueyal (Ma) metaGEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019878Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2EnvironmentalOpen in IMG/M
3300019888Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2EnvironmentalOpen in IMG/M
3300025711Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300027766Agave microbial communities from Guanajuato, Mexico - Or.Sf.rz (SPAdes)Host-AssociatedOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300030511Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI24739J22299_1009526133300001989Corn RhizosphereNALTQRALDRASGTWGGYQAWRQLDPEKRLQLVEQALATPANDIIDDFPLAL*
C688J35102_11855030723300002568SoilAPAESAVDRALARAAGSWGGYQAWRQLDSERRLKLVEQALGCPANDLNDCYPLAL*
C688J35102_12096381643300002568SoilMTHGHSNRAPAQNAVEQALARASGSWGGYQAWRQLDSERRLKLVEQALGCPANDLSDCYPLAL*
Ga0058694_101368133300003848AgaveMTYGHSSRAPAPSILVQKALARASGTWGGYQAWRQLDPEERLQLVEKALGCAANDCIDGFPIAL*
Ga0063454_10197156913300004081SoilMSHGQNNRAPAESAVDRALARAAGSWGGYQAWRQLDSERRLKLVEQALGCPANDLNDCYPLAL*
Ga0066677_1046408313300005171SoilMSHGHSNRAPAEAAVERALARASGTWGGYQAWRQLDARTRLELVEQALGCPANDLVDSFPLAL*
Ga0066690_1025572113300005177SoilMTYGHSNRAPAMNAAVERALARASGTWGGYQAWRQLDAEKRLELVEQALGCAANDLDCFPLAL*
Ga0066684_1070596233300005179SoilSPAANDKERTRATTYGHSDRAPAMNAAVERALARASGTWGGYQAWRQLDTEKRLELVEQALGCAANDVDCFPLAL*
Ga0066684_1093723923300005179SoilMAYGHSDRAPAENALERALARTSGSWGGFQAWRQLDAEKRLEIVERALGCPANDLIDRFPLAL*
Ga0066678_1081804613300005181SoilMTYGHSNRVPTGNAVVERALARAAGTWGGYQAWRQLDAEKRLELVEQALGCAANDPDCFPLAL*
Ga0066675_1145446423300005187SoilMSHGHSNRAPAEDVVERALARASGTWGGYQAWRQLDARTRLELVEQALDCPANYLVDSFPLAL*
Ga0070658_1006386623300005327Corn RhizosphereMTYGHSTRAPIRSTTVAKALARASGTWGGYQAWHQLDNHERLELVEKALGCAANDCIDCLPVAL*
Ga0070676_1057328313300005328Miscanthus RhizosphereMTYGHSTRVSAVNALTQRALDRANGTWGGYQAWRQLDPEKRLQLVEQALTTPANDIIDDFPLAL*
Ga0070690_10087867323300005330Switchgrass RhizosphereMTYGHSTRVSAVNALTQRALDRANGTWGGYQAWRQLDPEKRLQLVEQALATPANDIIDDFPLAL*
Ga0070670_10096710633300005331Switchgrass RhizosphereYGRSTRAPIESALTQRAIDRAAGTWGGYQAWRQLDTEQRLQLIEQALTAPANDIIDSFPVAL*
Ga0070666_1005371333300005335Switchgrass RhizosphereMTYGRRTRAPAESALTQRVIDRVAGTLGGYLAWRQLDTDQRLQLIEQALTAPANDIIDSFPVAL*
Ga0070660_10034727133300005339Corn RhizosphereMTYGRSTRAPAESALTQRAIDRATGTWGGYQAWRQLDTDRRLELVEQALAAPANDIIDNFPLAL*
Ga0070689_10197621023300005340Switchgrass RhizospherePAPHAGGKPQGRRRAMTYGHSTRVSAVNALTQRALDRANGSWGGYQAWRQLDPEKRLQLVEQALATPANDIIDDFPLAL*
Ga0070691_1026391013300005341Corn, Switchgrass And Miscanthus RhizosphereMTYGHSTRVSAVNALTQRALDRANGSWGGYQAWRQLDPEKRLQLVEQALGTPANDIIDDFPLAL*
Ga0070692_1012383023300005345Corn, Switchgrass And Miscanthus RhizosphereMTYGHSTRAPTRSTTVAKALARASGTWGGYQAWHQLDNHERLELVEKALGCAANDCIDCLPVAL*
Ga0070671_10060082513300005355Switchgrass RhizosphereMTYGRRTRAPAESALTQRAIDRIAGTWGGYMAWRQLDTDQRLQLIEQALTAPAN
Ga0070674_10007318123300005356Miscanthus RhizosphereMTYGRSTRAPAESALTQRAIDRASGTWGGYQAWRQLDTERRLELVEQALAAPANDIIDSFPVAL*
Ga0070659_10001547753300005366Corn RhizosphereMTYGRSTRAPIESALTQRAIDRAAGTWGGYQAWRQLDTDQRLQLIEQALIAPANDIIDSFPVAL*
Ga0070659_10093108323300005366Corn RhizosphereMTYGHSTRASAASSLTQRALDRASGSWGGYQAWRQLDPEKRLQLVEQALTTPANDVIDDFPLAL*
Ga0070667_10050500223300005367Switchgrass RhizosphereMTYGRRTRAPAESALTQRAIDRIAGTWGGYMAWRQLDTDQRLQLIEQALTAPANDIIDSFPVAL*
Ga0070705_10019356323300005440Corn, Switchgrass And Miscanthus RhizosphereMTYGHSTRVSAVNALTQRALDRANGSWGGYQAWRQLDPEKRLQLVEQALATPANDIIDDFPLAL*
Ga0070694_10077766933300005444Corn, Switchgrass And Miscanthus RhizosphereMTYGHSTRVSAVNALTQRALDRASGTWGGYQAWRQLDPEKRLQLVEQALATPANDIIDDFPLAL*
Ga0066687_1074924023300005454SoilMTYGHSNRAPAENAVAKALARASGTWGGYQAWRQLDAEKRLEIVEQALGCPANDLDCFPVAL*
Ga0066687_1075185623300005454SoilMAYGLSTRAPAANSLVQRALDRASETWGGYQAWRQLDSEKRLELIERALAAPANDIIDNFPLAL*
Ga0070706_10069147423300005467Corn, Switchgrass And Miscanthus RhizosphereMTYGHSTHVSAVNALTQRALDRANGSWGGYQAWRQLDPEKRLQLVEQALATPANDIIDDFPLAL*
Ga0070679_10134107313300005530Corn RhizosphereVNALTRRALDRANGSWGGYQAWRQLDPEKRLQLVEQALTTPANDIIDDFPLAL*
Ga0066704_1048416223300005557SoilMSHGHSNRAPAEDAVERALARASGTWGGYQAWRQLDARTRLELVEQALDCPANDLVDSFPLAL*
Ga0066698_1035711923300005558SoilMTYGQGNRAPADNALQRALARASGTWGGYQAWRQLDSEKRFELVEKALGCPANDLDDCFPLAL*
Ga0066699_1113383733300005561SoilMTFGHSNRAPSESAVAKALARASGTWGGYQAWRRLDAEKRIELVEQALGCPANDPDCFPLALRRERK*
Ga0066702_1062932033300005575SoilMTYGHSNRAPAEDAIVERPLERTAGTWGRYQAWRQLDAEKRLKLIERALGCPAYDLDCFPVAL*
Ga0066708_1030017713300005576SoilMAYGHSDRAPAENALERALARTSGSWGGFQAWRQLDAEKRLEIVERALGCPANDLIDS
Ga0066706_1102231633300005598SoilMTYGQGNRAPADNALQRALARASGTWGGYQAWRQLDAEKRLELVEQALDCAANDLDCFPLAL*
Ga0068852_10165056923300005616Corn RhizosphereMTYGHSTRLSAENAAVQRALTRASGTWGGNQAWRELDADSRLALIDRVLIADNDFIDDLPVAL*
Ga0068859_10033413243300005617Switchgrass RhizosphereSAVNALTQRALDRANGSWGGYQAWRQLDPEKRLQLVEQALTTPANDIIDDFPLAL*
Ga0068861_10252190513300005719Switchgrass RhizosphereMTYGRSTRAPIESALTQRAIDRAAGTWGGYQAWRQLDTDRRLELVEQALAAPANDIIDNFPLAL*
Ga0068858_10182377823300005842Switchgrass RhizosphereMTYGRSTRAPIESALTQRAIDRAAGTWGGYQAWRQLDTDQRLQLIEQALTAPANDIIDSFPVAL*
Ga0066696_1016192813300006032SoilMAYGHSDRAPAENALERALARTARTWGGYQAWRQLDAEKRLEIVERALGCPANDLIDRFPLAL*
Ga0066696_1064960013300006032SoilMTYGHSNRAPAMNAAVERALARAAGTWGGYQAWRQLDAEKRLELVEQALDCAAND
Ga0066696_1111909113300006032SoilMSHGHSNRAPAEDVVERALVRASGTWGGYQAWRQLDARTRLELVEQALDCPANDLVDSFPLAL*
Ga0075366_1040676113300006195Populus EndosphereLTAHLAGGLQQERTIAMTYGRSTRAPVESALTQRAIDRAAGTWGGYQAWRQLDTDRRLELVEQALAAPANDIIDNFPLAL*
Ga0075370_1065175523300006353Populus EndosphereMTYGRSTRAPIESALTQRAIDRAAGTWGGYQAWRQLDTDQRLQLIEQALTAPANDIVDSFPVAL*
Ga0066660_1134642723300006800SoilMTFGHSNRAPAANDAVARGLARASGTWGGYQAWRQLDAERKLELIDQALGCPANDLHDCFPLAL*
Ga0075428_10209800423300006844Populus RhizosphereMTYGHSTRVSAVNALTQRALDRANGSWGGYQAWRQLDPEKRLQLVEQALTTPANDIIDDFPLAL*
Ga0075421_10159417623300006845Populus RhizosphereMTYGHSTRVSAVNALTQRALDRANGSWGGYQAWRQLDPEKRLQLVEQALTTPANDVIDDFPLAL*
Ga0066710_10028104733300009012Grasslands SoilMTYGQGNRAPADNALQRALARASGTWGGYQAWRQLDSEKRFELVEKALGCPANDLDDCFPLAL
Ga0066710_10294351223300009012Grasslands SoilMTYGHSNRAPAENVVARALARASGTWGGYQAWRQLDADKRFELVEQALGCPANDLDRFPVAL
Ga0066709_10430983223300009137Grasslands SoilMTYGHSNRAPAENVVARALARASGTWGGYQAWRQLDADKRFELVEQALGCPANDLDCFPVAL*
Ga0105243_1126078113300009148Miscanthus RhizosphereMTYGHSTRVSAVNALTQRALDRANGSWGGYQAWRQLDPEKRLQLVEQALATPANDIIDDFPLA
Ga0105241_1009633353300009174Corn RhizosphereHSTRVSAVNALTQRALDRASGTWGGYQAWRQLDPEKRLQLVEQALATPANDIIDDFPLAL
Ga0105238_1213916233300009551Corn RhizosphereAMTYGHSTRLSAENAAVQRALTRASGTWGGNQAWRELDADSRLALIDRVLIADNDFIDDLPVAL*
Ga0126321_129979423300010145SoilMTYGHSLRAPVENAVAKALARASGTWGGYQVSGFHAWRKLDAEKRFELVEQVLGSAANDLDSFPVAL*
Ga0134065_1008417733300010326Grasslands SoilMIPPLTAHLAGGLQQERTIAMTYGRSTRAPAESALTQRAIDQVAGTWGGYLAWRQLDTDQRLQLIEQALTAPANDIIDSFPVAL*
Ga0134062_1046068223300010337Grasslands SoilMTYGQGNRAPADNALQRALARASGTWGGYQAWRQLDSEKRFELVERALGCPANDLDDCFPLAL*
Ga0105246_1008414213300011119Miscanthus RhizosphereMTYGRSTRAPAESALTQRAIDRATGTWGGYQAWRQLDTDQRLQLIEQALIAPANDIIDSFPVAL*
Ga0137382_1049327613300012200Vadose Zone SoilTKSPAPAENVVARALARASGTWGGYQAWRQLDADKRFELVEQALGCAANDLDCFPVAL*
Ga0137378_1061488323300012210Vadose Zone SoilMTYGHSNRAPAENAIAKALARASGTWGGYQAWRRLDAEKRIELVEQALGCPASDLDCFPVAL*
Ga0150985_10757331313300012212Avena Fatua RhizosphereMTYGHSDRAPAENVVARALARASETWGGYQAWRQLDAEKRFELVEQVLGSPANDPDCFPLAL*
Ga0150985_10792196513300012212Avena Fatua RhizosphereMTYGYSTRAPAANALTQRAIDGASRTSGGYQAWRQLDTERRLELIEQALAAPANDIIDSFPLAL*
Ga0150985_10927971913300012212Avena Fatua RhizosphereMTHGHSNRAPAQNAVEQALARASGSWGGYQAWRQLDSERRLKLFEQALGCPANDLSDCYPLAL*
Ga0150985_10938377013300012212Avena Fatua RhizosphereMTYGHSTRLPAENAAVKRALDRAHGTWGGYQAWRKLDVDCRLALVERALAPANDVIDEFPVVL*
Ga0150985_11207920833300012212Avena Fatua RhizosphereMTHGHSNRAPAQNAIEQALARASGSWGGYQAWRQLDSERRLKLVEQALGCPANDLNDCYPLAL*
Ga0137372_1050915223300012350Vadose Zone SoilMTYGQGNRAPADNALQRALARASGTWGGYQAWRQLDSEKRFELVERALDCPANDLDCLPLAL*
Ga0137384_1016607713300012357Vadose Zone SoilTYGHSNRAPAVNAAVERALARASGTWGGYQAWRQLDAEKRLELVEQALDCAANDLDCFPLAL*
Ga0150984_10112610513300012469Avena Fatua RhizosphereMSHGHSNRAPAQDAIDRALARASGTWGGYQAWRQLDAGTRLKLVEQALGCPANDLVDSFPLAL*
Ga0150984_10728001833300012469Avena Fatua RhizosphereMAYGLSTRAPAASSLVQRALDRASGTWGGYQAWRKLDSEKRLELIEQALATPANDRIDGFPIAL*
Ga0150984_10998752513300012469Avena Fatua RhizospherePDEKRRRAMSHGQSNRAPAESAVDRALARAAGSWGGYQAWRQLDSERRLKLVEQALGCPANDLTDCYPLAL*
Ga0150984_11474806933300012469Avena Fatua RhizosphereMTHGHGDRAPVDNALQRALARASGTWGGYQAWRQLDSEKRLELVEQALGCPANNLDDCFPLAL*
Ga0150984_11974680523300012469Avena Fatua RhizosphereMTYGHSDRAPAENVVARALARASGTWGGYQAWRQLDAEKRFELVEQALGSPANDHDYFPVAL*
Ga0150984_12262352013300012469Avena Fatua RhizosphereKRRRAMSHGQSNRAPAESAVDRALARAAGSWGGYQAWRQLDSERRLKLVEQALGCPANDLNDCYPLAL*
Ga0134087_1077397623300012977Grasslands SoilMTHGHNNRAPAQNAIEQALARASGSWGGYQAWRQLDSERRLKLVEQALGCPANDLSDCYPLAL*
Ga0157373_1035348533300013100Corn RhizosphereMTYGQWSRASAKDQAVERALARASGTWGGYQAWRQLDTDRSLELVEQALAAPAT*
Ga0157373_1045732523300013100Corn RhizosphereMIYGHSSRAPVRSTPVAKALARASGTWGGYQAWRQLDHQERLELVEKALGCAANDCIDSLPLAL*
Ga0157373_1095909023300013100Corn RhizosphereMTHGHWNRAPAEDAVERALARASGSWGGYQAWRQLDARTRLELVEQALGCPANDLVDSFPLAL*
Ga0157372_1263221613300013307Corn RhizosphereMTYGHSTRVSAVNALTQRALDRASGTWGGYQVWRPLAPEKRLQLVEQALATPANDIIDDFPLAL*
Ga0134081_1015481713300014150Grasslands SoilDQKRRRAMSHGHSNRAPAEAAVERALARASGTWGGYQAWRQLDPRTRLELVEQALGCPANDLVDSFPLAL*
Ga0134081_1041640113300014150Grasslands SoilMTYGHSDRVPAENAVVERALARAAGTWGGYQAWRQLDAEKRLELVEQALGCAANDPDCFPLAL*
Ga0182000_1024052523300014487SoilMTYGHSTRAPAPSALVEKALARASGTFGGYQAWRQLDPEERLDLVEKALGCAANDCIDSFPLAL*
Ga0132258_1048822113300015371Arabidopsis RhizosphereMTYGHSTRLSAENAAVQRALTRASGTWGGDQAWRELDADSRLALIDRVLRADNDFIDDLPVAL*
Ga0132258_1071470533300015371Arabidopsis RhizosphereMTYGHSTRVSAVNALTQRALDRASGSWGGYQAWRQLDPETRLQLVEQALATPANDIIDDFPLAL*
Ga0132256_10019698223300015372Arabidopsis RhizosphereMTYGHSTRVSAVNALTQRALDRASGSWGGYQAWRQLDPEKRLQLVEQALTTPANDVIDDFPLAL*
Ga0132257_10053956233300015373Arabidopsis RhizosphereMTYGHSTRVSAVNALTQRALDRASGSWGGYQAWRQLDPEKRLQLVEQALATPANDVIDDFPLAL*
Ga0132257_10272109313300015373Arabidopsis RhizosphereMTYGHSTRVSAVNALTQRALDRASGTWGGYQAWRQLAPETRLQLVEQALATPANDIIDDFPLAL*
Ga0132257_10449418613300015373Arabidopsis RhizosphereSTRVSAVNALTQRALDRASGSWGGYQAWRQLDPETRLQLVEQALATPANDIIDDFPLAL*
Ga0066655_1114019413300018431Grasslands SoilMTYGHSNRAPAMNAAVERALARASGTWGGYQAWRQLDAEKRLELVEQALDCAANDLDCFPLAL
Ga0066662_1258030413300018468Grasslands SoilMTFGHSNRAPAANDAVARGLARASGTWGGYQAWRQLDAERKLELIEQALGCPANDLHDCFPLAL
Ga0066669_1131656023300018482Grasslands SoilMTYGHSDRAPAENVVARALARASGTWGGYQAWRQLDAEKRFELVERALGSPANDLDCFPVAL
Ga0193715_103614223300019878SoilMTYGHSPRASAYSPAVEHALNRAAGTWGGYQAWRQLDPDSRLDLVEQALRPANDVIDAFPLAL
Ga0193751_1002718103300019888SoilMTYGRSTRASAANSAVERALARATGTWGGYQAWRQLAPDRRLELVEKALVPANDCIDSYPLAL
Ga0207696_111837523300025711Switchgrass RhizosphereMTYGHSTRVSAVNALTQRALDRANGSWGGYQAWRQLDPEKRLQLVEQALATPANDIIDDFPLAL
Ga0207710_1010972013300025900Switchgrass RhizosphereMTYGHSTRLSAENAAVQRALTRASGTWGGNQAWRELDADSRLALIDRVLIADNDFIDDLPVAL
Ga0207688_1005773933300025901Corn, Switchgrass And Miscanthus RhizosphereMTYGHSTRVSAVNALTQRALDRASGTWGGYQAWRQLDPEKRLQLVEQALATPANDIIDDFPLAL
Ga0207688_1008855523300025901Corn, Switchgrass And Miscanthus RhizosphereMTYGRSTRAPIESALTQRAIDRAAGTWGGYQAWRQLDTDQRLQLIEQALIAPANDIIDSFPVAL
Ga0207680_1091327513300025903Switchgrass RhizosphereNERRISISKSSRRRGLIPPLTAHLAGGLQQERTIAMTYGRRTRAPAESALTQRAIDRIAGTWGGYMAWRQLDTDQRLQLIEQALTAPANDIIDSFPVAL
Ga0207647_1067998223300025904Corn RhizosphereMTYGRSTRAPIRSTTVAKALARASGTWGGYQAWHQLDNHERLELVEKALGCAANDCIDCLPVAL
Ga0207645_1013789323300025907Miscanthus RhizosphereMTYGHSTRVSAVNALTQRALDRANGTWGGYQAWRQLDPEKRLQLVEQALTTPANDIIDDFPLAL
Ga0207705_1005358343300025909Corn RhizosphereMTYGHSTRAPIRSTTVAKALARASGTWGGYQAWHQLDNHERLELVEKALGCAANDCIDCLPVAL
Ga0207657_1031607423300025919Corn RhizosphereMTYGRSTRAPAESALTQRAIDRATGTWGGYQAWRQLDTDRRLELVEQALAAPANDIIDNFPLAL
Ga0207644_1050747923300025931Switchgrass RhizosphereMTYGRRTRAPAESALTQRAIDRIAGTWGGYMAWRQLDTDQRLQLIEQALTAPANDIIDSFPVA
Ga0207686_1107510723300025934Miscanthus RhizosphereMTYGRSTRAPAESALTQRAIDRASGTWGGYQAWRQLDTERRLELVEQALAAPANDIIDSFPVAL
Ga0207651_1023291313300025960Switchgrass RhizosphereMTYGRRTRAPAESALTQRVIDRVAGTLGGYLAWRQLDTDQRLQLIEQALTAPANDIIDSFPVAL
Ga0207668_1177802113300025972Switchgrass RhizosphereAGGLQQERTIAMTYGRSTRAPIESALTQRAIDRAAGTWGGYQAWRQLDTDQRLQLIEQALIAPANDIIDSFPVAL
Ga0207658_1122448423300025986Switchgrass RhizosphereMTYGRRTRAPAESALTQRAIDRIAGTWGGYMAWRQLDTDQRLQLIEQALTAPANDIIDSFPVAL
Ga0207677_1015660123300026023Miscanthus RhizosphereMTYGRRTRAPAESALTQRVIDRVAGTWGGYLAWRQLDTDQRLQLIEQALTAPANDIIDSFPVAL
Ga0209687_125868113300026322SoilMTYGHSNRAPAENAVAKALARASGTWGGYQAWRQLDAEKRLEIVEQALGCPANDLDCFPVAL
Ga0209474_1014238513300026550SoilMSHGHSNRAPAEDVVERALVRASGTWGGYQAWRQLDARTRLELVEQALDCPANDL
Ga0209474_1023893223300026550SoilMAYGHSDRAPAENALERALARTARTWGGYQAWRQLDAEKRLEIVERALGCPANDLIDRFPLAL
Ga0209796_1008250823300027766AgaveMTYGHSSRAPAHSALVEKALARASGTWGGYQAWRQLDPAERLDLVEKALGCAANDCIDDFPIAL
Ga0209796_1018526623300027766AgaveMTYGHSSRAPAPSILVQKALARASGTWGGYQAWRQLDPEERLQLVEKALGCAANDCIDGFPIAL
Ga0207428_1069784623300027907Populus RhizosphereMTYGHSTRVSAVNALTQRALDRANGTWGGYQAWRQLDPEKRLQLVEQALATPANDIIDDFPLAL
Ga0209382_1126489313300027909Populus RhizosphereMTYGHSTRVSAVNALTQRALDRANGSWGGYQAWRQLDPEKRLQLVEQALTTPANDIIDDFPLAL
Ga0268241_1000022823300030511SoilMTYGHSTRLSAGNAAVERALARASGTWGGYQAWRQLDADRRLALVEEALRPANDFEDNFPIAL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.