Metagenome Family F078969

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078969
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	50 residues
Representative Sequence	VLAVHEEGRRLEVRGEGGEVLEFVLNPATARFVSAGSAHGPRLELLAPG
Number of Associated Samples	103
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	41.23 %
% of genes near scaffold ends (potentially truncated)	55.17 %
% of genes from short scaffolds (< 2000 bps)	78.45 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (77.586 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (18.965 % of family members)
Environment Ontology (ENVO)	Unclassified (22.414 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.207 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.90% β-sheet: 27.27% Coil/Unstructured: 68.83%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF00224	PK	24.14
PF00753	Lactamase_B	13.79
PF02887	PK_C	5.17
PF07366	SnoaL	4.31
PF01209	Ubie_methyltran	1.72
PF00884	Sulfatase	1.72
PF05239	PRC	0.86
PF00583	Acetyltransf_1	0.86
PF08546	ApbA_C	0.86
PF12680	SnoaL_2	0.86
PF02219	MTHFR	0.86
PF00440	TetR_N	0.86
PF13472	Lipase_GDSL_2	0.86
PF00005	ABC_tran	0.86
PF13344	Hydrolase_6	0.86
PF00664	ABC_membrane	0.86
PF13657	Couple_hipA	0.86
PF01381	HTH_3	0.86
PF07690	MFS_1	0.86
PF10009	DUF2252	0.86
PF07885	Ion_trans_2	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	29.31
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	1.72
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	1.72
COG0685	5,10-methylenetetrahydrofolate reductase	Amino acid transport and metabolism [E]	0.86
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.59 %
Unclassified	root	N/A	22.41 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.59 %
Unclassified	root	N/A	22.41 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.59 %
Unclassified	root	N/A	22.41 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	65.52 %
Unclassified	root	N/A	22.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	65.52 %
Unclassified	root	N/A	22.41 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	54.31 %
Unclassified	root	N/A	22.41 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9.48 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.86 %

Name	Rank	Taxonomy	Distribution
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	54.31 %
Unclassified	root	N/A	22.41 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	8.62 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.41 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	18.97 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.62 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	5.17 %
Phenylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.41 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	18.97 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.62 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	5.17 %
unclassified Phenylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.41 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	18.97 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.62 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	4.31 %
Phenylobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004080\|Ga0062385_11298523	Not Available	501	Open in IMG/M
3300004152\|Ga0062386_100001013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	18057	Open in IMG/M
3300004152\|Ga0062386_100180701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1655	Open in IMG/M
3300004635\|Ga0062388_100836996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	876	Open in IMG/M
3300004635\|Ga0062388_102961116	Not Available	501	Open in IMG/M
3300005435\|Ga0070714_101059261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	790	Open in IMG/M
3300005437\|Ga0070710_10472330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	854	Open in IMG/M
3300005451\|Ga0066681_10298415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	985	Open in IMG/M
3300005468\|Ga0070707_101274523	Not Available	701	Open in IMG/M
3300005559\|Ga0066700_10612284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	758	Open in IMG/M
3300005561\|Ga0066699_10193777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1412	Open in IMG/M
3300005566\|Ga0066693_10203596	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300005576\|Ga0066708_10719554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	631	Open in IMG/M
3300005587\|Ga0066654_10399896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	749	Open in IMG/M
3300005602\|Ga0070762_11062718	Not Available	557	Open in IMG/M
3300006046\|Ga0066652_100030545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3853	Open in IMG/M
3300006055\|Ga0097691_1150879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	621	Open in IMG/M
3300006176\|Ga0070765_100462295	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300006176\|Ga0070765_101279085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	692	Open in IMG/M
3300006638\|Ga0075522_10005849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	8625	Open in IMG/M
3300006638\|Ga0075522_10018816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	4380	Open in IMG/M
3300006854\|Ga0075425_101813016	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300006871\|Ga0075434_101146171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	790	Open in IMG/M
3300009012\|Ga0066710_101522249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1031	Open in IMG/M
3300009521\|Ga0116222_1379383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	614	Open in IMG/M
3300009524\|Ga0116225_1473136	Not Available	557	Open in IMG/M
3300009524\|Ga0116225_1550002	Not Available	512	Open in IMG/M
3300009672\|Ga0116215_1274559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	735	Open in IMG/M
3300009683\|Ga0116224_10033799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2510	Open in IMG/M
3300009700\|Ga0116217_10263093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1117	Open in IMG/M
3300009839\|Ga0116223_10144454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1480	Open in IMG/M
3300010863\|Ga0124850_1014121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2542	Open in IMG/M
3300012207\|Ga0137381_11121786	Not Available	677	Open in IMG/M
3300012211\|Ga0137377_10003566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	12094	Open in IMG/M
3300012960\|Ga0164301_10662483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	780	Open in IMG/M
3300014164\|Ga0181532_10370196	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300014169\|Ga0181531_10160278	All Organisms → cellular organisms → Bacteria	1362	Open in IMG/M
3300016270\|Ga0182036_10397482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1073	Open in IMG/M
3300016371\|Ga0182034_12050499	Not Available	505	Open in IMG/M
3300017946\|Ga0187879_10000814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	20976	Open in IMG/M
3300017972\|Ga0187781_10732333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	716	Open in IMG/M
3300018037\|Ga0187883_10481192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	639	Open in IMG/M
3300018431\|Ga0066655_10231891	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300018433\|Ga0066667_12122031	Not Available	521	Open in IMG/M
3300018482\|Ga0066669_10358993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1215	Open in IMG/M
3300018482\|Ga0066669_11417681	Not Available	630	Open in IMG/M
3300019787\|Ga0182031_1409384	Not Available	1191	Open in IMG/M
3300019887\|Ga0193729_1117923	Not Available	991	Open in IMG/M
3300020582\|Ga0210395_11120859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	580	Open in IMG/M
3300021171\|Ga0210405_10468351	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300021402\|Ga0210385_10011377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	5441	Open in IMG/M
3300021404\|Ga0210389_10001138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	21880	Open in IMG/M
3300021475\|Ga0210392_10454737	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300021479\|Ga0210410_10266091	All Organisms → cellular organisms → Bacteria	1538	Open in IMG/M
3300025574\|Ga0208717_1078802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	745	Open in IMG/M
3300025862\|Ga0209483_1010337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	5246	Open in IMG/M
3300025862\|Ga0209483_1013756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	4380	Open in IMG/M
3300025898\|Ga0207692_10057899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1995	Open in IMG/M
3300026300\|Ga0209027_1277311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300026328\|Ga0209802_1195512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	786	Open in IMG/M
3300026330\|Ga0209473_1068488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1513	Open in IMG/M
3300026523\|Ga0209808_1285275	Not Available	529	Open in IMG/M
3300026542\|Ga0209805_1342162	Not Available	569	Open in IMG/M
3300027641\|Ga0208827_1106890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	824	Open in IMG/M
3300027662\|Ga0208565_1143043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	700	Open in IMG/M
3300027692\|Ga0209530_1188590	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300027696\|Ga0208696_1015468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2964	Open in IMG/M
3300027768\|Ga0209772_10001138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	6588	Open in IMG/M
3300027768\|Ga0209772_10027478	Not Available	1638	Open in IMG/M
3300027812\|Ga0209656_10005961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	7826	Open in IMG/M
3300027812\|Ga0209656_10365014	Not Available	654	Open in IMG/M
3300027902\|Ga0209048_10004892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12739	Open in IMG/M
3300027902\|Ga0209048_10009805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	8638	Open in IMG/M
3300027915\|Ga0209069_10176733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1076	Open in IMG/M
3300028654\|Ga0265322_10054119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1138	Open in IMG/M
3300028742\|Ga0302220_10233434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	679	Open in IMG/M
3300028773\|Ga0302234_10217926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	824	Open in IMG/M
3300028789\|Ga0302232_10000192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	49955	Open in IMG/M
3300028877\|Ga0302235_10349221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	636	Open in IMG/M
3300028879\|Ga0302229_10152829	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300028906\|Ga0308309_11084653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	692	Open in IMG/M
3300029943\|Ga0311340_11121375	Not Available	638	Open in IMG/M
3300029943\|Ga0311340_11609715	Not Available	504	Open in IMG/M
3300029954\|Ga0311331_11292120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	609	Open in IMG/M
3300029999\|Ga0311339_10546711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1166	Open in IMG/M
3300030007\|Ga0311338_11289738	Not Available	687	Open in IMG/M
3300030056\|Ga0302181_10002929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	11900	Open in IMG/M
3300030490\|Ga0302184_10036095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2511	Open in IMG/M
3300030509\|Ga0302183_10074379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1341	Open in IMG/M
3300030520\|Ga0311372_10591649	All Organisms → cellular organisms → Bacteria	1589	Open in IMG/M
3300030580\|Ga0311355_10747268	Not Available	904	Open in IMG/M
3300030617\|Ga0311356_11500459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	610	Open in IMG/M
3300030707\|Ga0310038_10087384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1658	Open in IMG/M
3300030739\|Ga0302311_10457282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	886	Open in IMG/M
3300031027\|Ga0302308_10164061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1453	Open in IMG/M
3300031028\|Ga0302180_10183322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1137	Open in IMG/M
3300031234\|Ga0302325_13222490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300031236\|Ga0302324_100030149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10258	Open in IMG/M
3300031344\|Ga0265316_10989235	Not Available	585	Open in IMG/M
3300031452\|Ga0272422_1209444	Not Available	552	Open in IMG/M
3300031520\|Ga0272428_1010938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	11701	Open in IMG/M
3300031525\|Ga0302326_10853210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1303	Open in IMG/M
3300031525\|Ga0302326_11818011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	797	Open in IMG/M
3300031708\|Ga0310686_113115357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	521	Open in IMG/M
3300031711\|Ga0265314_10386422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	760	Open in IMG/M
3300031726\|Ga0302321_100914224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	995	Open in IMG/M
3300031819\|Ga0318568_10605693	Not Available	682	Open in IMG/M
3300031942\|Ga0310916_10720180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	844	Open in IMG/M
3300031962\|Ga0307479_11051617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	782	Open in IMG/M
3300032065\|Ga0318513_10645047	Not Available	519	Open in IMG/M
3300032896\|Ga0335075_10017009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	10832	Open in IMG/M
3300033134\|Ga0335073_11469150	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300033134\|Ga0335073_12157118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300034065\|Ga0334827_150948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	723	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.69%
Host-Associated	Host-Associated	4.31%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.03%
Aquatic	Environmental → Aquatic	14.66%
Plants	Host-Associated → Plants	4.31%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.76%
Peat	Environmental → Terrestrial → Peat	21.55%
Freshwater	Environmental → Aquatic → Freshwater	13.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.31%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	1.72%
Sediment	Environmental → Aquatic → Sediment	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	21.55%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.07%
Loam	Environmental → Terrestrial → Soil → Loam	8.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.31%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.59%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.72%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	21.55%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.66%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.66%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	12.07%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.34%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	5.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.17%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.59%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.72%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.86%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.86%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	18.97%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	9.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.48%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	8.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.76%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	5.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.17%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.59%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.59%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.72%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.72%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.72%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.72%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	1.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.72%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.86%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.86%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.86%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.86%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.86%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.86%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.86%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300025574	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 shallow (SPAdes)	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028654	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG	Host-Associated	Open in IMG/M
3300028742	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031452	Rock endolithic microbial communities from Victoria Land, Antarctica - Mt New Zealand nord	Environmental	Open in IMG/M
3300031520	Rock endolithic microbial communities from Victoria Land, Antarctica - Finger Mt nord	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300034065	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 1-5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062385_112985231	3300004080	Bog Forest Soil	RGTVVAVHEHGRRLEVAGEDGTVLEFVLNPATARFVHAGGAQGPRLELLGEQG*
Ga0062387_1015474972	3300004091	Bog Forest Soil	RRLLVRDDSGELLEFVLNPATARFVSGAGVHGPRLELLGERE*
Ga0062386_1000010138	3300004152	Bog Forest Soil	VLAIHEQGRRLQVRGEGGEVLEFVLNPATARFVSVGTAHGPRLELLDDPA*
Ga0062386_1001807012	3300004152	Bog Forest Soil	VLAVHEQGRRVEVRGEAGELLEFVLSPATARFVSPGGTHGPRLELLEDPG*
Ga0062388_1008369961	3300004635	Bog Forest Soil	AHFGGGYEDATVLAVYDDGRRLEVRDEAGAVLEFVLNPATARFVLAGGGHGPRLELLGDE
Ga0062388_1029611161	3300004635	Bog Forest Soil	RGTVVAVHEHGRRLEVAGEDGTVLEFVLNPATARFVHAGGAQGPRLELLGEQR*
Ga0070714_1010592613	3300005435	Agricultural Soil	RRLQVRGETGEVHEFVLSPATARFVDASSPHGPRLELLAVRGQ*
Ga0070710_104723302	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VVLAVHEHGRRLQVRGEGGEVLEFVLNPATARFVAAGGAQGPRLELLAES*
Ga0066681_102984152	3300005451	Soil	VQRVHDEGRRVLVRADDGEMFEFVLSPATARFVSASGPHGPRLELRAGG*
Ga0070707_1012745232	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VLAVEEDGRRVQVRGEEGVLREFVLSPATARFVSAGGGQGPRLELVDEP*
Ga0070731_102748943	3300005538	Surface Soil	EGRHLSVRGEKGDTLEFVLSPATARFIAVGLSHGPRLELLGESA*
Ga0066700_106122841	3300005559	Soil	VHDGGRRVLVRDEAGEVLEFALSPATARFMATGPAHGPRLELLGGS*
Ga0066699_101937773	3300005561	Soil	GSEAGVVLAVYEDGRRLQVRGEEGEVLEFVLSPATARFVSAAGAHGPRLELPGGA*
Ga0066693_102035962	3300005566	Soil	VQQVHDDGRRVLVRADDGELLEFVLSPATARFVSTDGPHGPRLE
Ga0066708_107195542	3300005576	Soil	VQRVHDEGRRVLVRADDGELLEFVLSPATARFVSASGPHGPRLELLADA*
Ga0066654_103998962	3300005587	Soil	VQRVHDEGRRVLVRADDGELLEFVLSPSTARFVSAGEAHGPRLELLGEA*
Ga0070762_110627182	3300005602	Soil	TVVAVYEEGRRVEVRGEEAGEMLEFVLSSATARFVSAGSAQGPRLELLAD*
Ga0066652_1000305454	3300006046	Soil	VQQVHDDGRRVLVRADDGELLEFVLSPATARFVSTDGPHGPRLELLADA*
Ga0097691_11508793	3300006055	Arctic Peat Soil	EGRRLEVRCEGGEITEFVLSPSTARFVSAASPHGPRLELLADPP*
Ga0070765_1004622953	3300006176	Soil	MVEQATVVAVHDKGRRLEVRGEGGEVLEFVLSRATARFAAAGASGGPRLELLDRHD*
Ga0070765_1012790851	3300006176	Soil	GTVQALHDEGRHLEVRCEGGGVLDFVLSPATARFVSAASAYGPRLELLDEPG*
Ga0075522_100058495	3300006638	Arctic Peat Soil	MVIAVHEGGRRLEVRCEGGEIAEFVLSPSTARFVSAARPHGPRLELLADQP*
Ga0075522_100188165	3300006638	Arctic Peat Soil	VLVVSEQGRRVEVRGESGELYEFVLSPATARFVSAEQAHGPRLELLDPDA*
Ga0075425_1018130162	3300006854	Populus Rhizosphere	VGVHDEGRRVEVRSDDGELLEFVLNPATARFVSASGPHGPRLELLPDA*
Ga0075434_1011461713	3300006871	Populus Rhizosphere	VVVGVHDEGRRVEVRSDDGELLEFVLNPATARFVSASGPHGPRLELLPDA*
Ga0066710_1015222491	3300009012	Grasslands Soil	VHEEGRRLEVRGEAGEVHEFVLSPATARFVDSSSPHGPRLELLGVRGQ
Ga0116222_13793831	3300009521	Peatlands Soil	MVIAVYEEGRRVEVRCEGGEIAEFVLSRSTARFVSAKSPHGPRLELLAEPT*
Ga0116225_14731361	3300009524	Peatlands Soil	EGRRVEVRGEAGGEMLEFVLSAATARFVSAGSAQGPRLELLAEED*
Ga0116225_15500021	3300009524	Peatlands Soil	EEGRRVEVRCEGGEIAEFVLSRSTARFVSAKSPHGPRLELLAEPT*
Ga0116215_12745593	3300009672	Peatlands Soil	FGGGFEPGTVVAVSEGGRRLHVRGESGDTLEFVLSPATARFVAAGVSHGPRLELLSDPA*
Ga0116224_100337993	3300009683	Peatlands Soil	VVAVYEEGRRVEVRGEAGGEMLEFVLSAATARFVSAGSAQGPRLELLAEED*
Ga0116217_102630932	3300009700	Peatlands Soil	VLAVHEQGRRLEVSGEDGEVLEFVLSPATARFVSAESAHGPRLELLADRL*
Ga0116223_101444543	3300009839	Peatlands Soil	EPGTVVAVSEQGRRLHVRGESGDTLEFVLSPATARFVAAGASHGPRLELLGDPA*
Ga0124850_10141212	3300010863	Tropical Forest Soil	MVLAVHEQGRRLEVRDAAGEVLEFVLSPATARFRSGESAHGPRLELLEGPA*
Ga0137381_111217863	3300012207	Vadose Zone Soil	GGGVEAGVVLAVEEDGRRVQVRGEEGVLREFVLSPATARFVSAGGGQGPRLELVDEP*
Ga0137377_100035669	3300012211	Vadose Zone Soil	VHFGGGVESGVVLAVHDSGRRVQVRGEEGEVREFVLSPATARFVSADGAHGPRLELLGEA
Ga0164301_106624831	3300012960	Soil	GTVVALDDDGRRLEVLCEGGATLTFVLSPATARFVAAGGAHGPRLELLDG*
Ga0181532_103701962	3300014164	Bog	ETGVVVAVREEGRRLEVRGEGGEVLEFVLSPATARFVAAGGGQGPRLELGGERH*
Ga0181531_101602782	3300014169	Bog	VGVVVAVHDEGRRLEVRGEEGEVLEFLLSRATARFVAAGGGQGPRLELVEPSARISHQ*
Ga0182036_103974823	3300016270	Soil	GRRLQVRGEGGEVLEFVLNPATARFVAAGGAQGPRLELLGES
Ga0182034_120504991	3300016371	Soil	GFERGVVLAVHERGRRLQVRGEGGEVLEFVLNPATARFVAAGGAQGPRLELLGES
Ga0187879_100008148	3300017946	Peatland	MGVVVAVREEGRRLEVRGEGGEVLEFVLSQATARFVSAGSAHGPRLELRGDRE
Ga0187781_107323331	3300017972	Tropical Peatland	REQGRRIEVSAEAGELLEFVLSPATARFVAVGSAHGPRLELL
Ga0187883_104811922	3300018037	Peatland	FGMGVVGAVREGGRRLEVRAEGGEVMEFVLSQATARFVSAGSAHGPRLELRGDRE
Ga0066655_102318913	3300018431	Grasslands Soil	VHFGGGFESGVVLAVHDDGRRVQVRGEGGEVREFVLSPATARFVSADSAHGPRLELLGEL
Ga0066667_121220311	3300018433	Grasslands Soil	VLAVHEEGRRLEVRGEAGDVREFVLSPATARFVDASSPHGPRLELLGVRGQ
Ga0066669_103589932	3300018482	Grasslands Soil	VQRVHDEGRRVLVRADDGEMFEFVLSPATARFVSASGPHGPRLELRAGG
Ga0066669_114176812	3300018482	Grasslands Soil	GRRVEVRSDEGELLEFVLNPATARFVSASGPHGPRLELLQDA
Ga0182031_14093843	3300019787	Bog	VLAVHDGGRRLEVRGEDGRLLEFTLNPASARFLGGPDAGGPRLELLDRD
Ga0193729_11179233	3300019887	Soil	VLAVHEDGRRLEVRGETGEVLEFVLSPATARFVHAGAAQGPRLELLGESSA
Ga0210395_111208591	3300020582	Soil	VVVAVHDDGRRLEVRGEGGEVVEFSLSRATARFVAAGGGQGPRLELVEPRE
Ga0210405_104683511	3300021171	Soil	FGGGVEGGTVVAVHDDGRRLEVRDEAGEVLEFVLNPATARFVFGGGGRGPRLELGGDQG
Ga0210385_100113771	3300021402	Soil	EEGRRLEVRGEAGEVLEFALSLATARFVAAGGCHGPRLELVGARVGQGPPRPAA
Ga0210389_1000113822	3300021404	Soil	VAVYDGGRRLHVRGEGGQVLEFVLSPATARFVEGGSGHGARLELLGQRD
Ga0210392_104547372	3300021475	Soil	VLAVREEGRRLEVRCAGGEVLEFVLSPATARFVSAAGAHGPRLELLGHED
Ga0210410_102660912	3300021479	Soil	VLAVHEEGRRLQVRGESGEVLEFVLSPASARFVAAGGTHGPRLELLGDGS
Ga0208717_10788021	3300025574	Arctic Peat Soil	VTAVREDGRRVEVIGESGERLEFVLSPATARFVSAASAHGPRLELLS
Ga0209483_10103375	3300025862	Arctic Peat Soil	MVIAVHEGGRRLEVRCEGGEIAEFVLSPSTARFVSAARPHGPRLELLADQP
Ga0209483_10137563	3300025862	Arctic Peat Soil	VLVVSEQGRRVEVRGESGELYEFVLSPATARFVSAEQAHGPRLELLDPDA
Ga0207692_100578993	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	FERGTVIAVFEDGRRVSVRGESGETLEFVLSPATARFVAAGVAHGPRLELLGDPA
Ga0209027_12773112	3300026300	Grasslands Soil	VQRVHEEGRRVLVRADDGEMLEFVLSPATARFVSASGPHGPRLELLADD
Ga0209802_11955121	3300026328	Soil	GGGVEAGVVLAVEEDGRRVQVRGEEGVLREFVLSPATARFVSAGGGQGPRLELVDEP
Ga0209473_10684881	3300026330	Soil	VVLAVHDDGRRVQVRGEGGEVREFVLSPATARFVSADSAHGPRLELLGEL
Ga0209808_12852752	3300026523	Soil	AVHDDGRRVQVRGEGGEVREFVLSPATARFVSADSAHGPRLELLGEL
Ga0209805_13421621	3300026542	Soil	GSEAGVVLAVYEDGRRLQVRGEEGEVLEFVLSPATARFVSAAGAHGPRLELPGGA
Ga0208827_11068902	3300027641	Peatlands Soil	MVIAVYEEGRRVEVRCEGGEIAEFVLSRSTARFVSAKSPHGPRLELLAEPT
Ga0208565_11430431	3300027662	Peatlands Soil	VSEGGRRLHVRGESGDTLEFVLSPATARFVAAGVSHGPRLELLSDPA
Ga0209530_11885902	3300027692	Forest Soil	VLAVHDDGRRLEVRDEAGEVLEFVLNPATARFVSAAGAHGPRLELL
Ga0208696_10154683	3300027696	Peatlands Soil	VVAVYEEGRRVEVRGEAGGEMLEFVLSAATARFVSAGSAQGPRLELLAEED
Ga0209772_100011386	3300027768	Bog Forest Soil	VIAVHEQGRRLEVRGDTGEVLEFVLSPATARFVFAGGLHGPRLELLDR
Ga0209772_100274783	3300027768	Bog Forest Soil	VVGVHEQGRRLQVRDEEGAVLAFVLNPATARFISAGDPHGPRLELLGEER
Ga0209656_100059613	3300027812	Bog Forest Soil	VLAVHEQGRRVEVRGEAGELLEFVLSPATARFVSPGGTHGPRLELLEDPG
Ga0209656_103650142	3300027812	Bog Forest Soil	GGGFEEGTVLAVLEQGRRLQVSGESGEMLEFVLSPATARFVSAAGAHGPRLELLGDPA
Ga0209048_100048924	3300027902	Freshwater Lake Sediment	VLAVHEEGRRLEVRGEGGEVLEFVLNPATARFVSAGSAHGPRLELLAPG
Ga0209048_100098054	3300027902	Freshwater Lake Sediment	VLAVHEQGRRLAVRCEGGEVLEFVLSPATARFVSAGSAHGPRLELLADPS
Ga0209069_101767331	3300027915	Watersheds	RGTVVAIRDDGRLLEVRGESGELLEFVLSPATARFVSAASAHGPRLELLSGE
Ga0265322_100541193	3300028654	Rhizosphere	GRRVEVRGEDGEVLAFVLSPATARFTSADSAHGPRLELLGEGA
Ga0302220_102334342	3300028742	Palsa	VLAVHEHGRRLEVAGEDGTVLEFVLNPATARFIHAGGAQGPRLELLEQGG
Ga0302234_102179262	3300028773	Palsa	VLAVHEHGRRLEVAGEDGTVLEFVLNPATARFIHAGGAQGPRLELLEQDG
Ga0302232_1000019221	3300028789	Palsa	MGVVVAVREEGRRLEVRAEGGEVVEFVLSPATARFVAAGGGQGPRLELAVDRG
Ga0302235_103492212	3300028877	Palsa	VLAVYDDGRRLHVRDESGELLEFVLNPATARFVSSAGAHGPRLELLSDRRV
Ga0302229_101528291	3300028879	Palsa	AVYDDGRRLHVRDESGELLEFVLNPATARFVSSAGAHGPRLELLSDRRV
Ga0308309_110846531	3300028906	Soil	GTVQALHDEGRHLEVRCEGGGVLDFVLSPATARFVSAASAYGPRLELLDEPG
Ga0311340_111213751	3300029943	Palsa	MVLAVHEQGRRLQVRGEGGEVLEFVLSPATARFFLAGSVNGPRLELLGRP
Ga0311340_116097151	3300029943	Palsa	VLAVYEHGRRLEVAGEDGTVLEFVLNPATARFVRAGGAQGPRLELLDKE
Ga0311331_112921202	3300029954	Bog	VSHFGGEREDAIVIAVADDGRRLRVRTAAGHEQEFALSPATARFVSAENRHGPRLELL
Ga0311339_105467113	3300029999	Palsa	MVLAVHEQGRRLQVRGEGGEVLEFVLSPATARFFLAGSVNGPRLELLGRPA
Ga0311338_112897382	3300030007	Palsa	VAVHEHGRRLEVVGEDGTALEFVLNPATARFIHAGGAQGPRLELVEDEE
Ga0302181_1000292911	3300030056	Palsa	VLGVHEHGRRLEVAGEDGTVLEFVLNPATARFIHAGGAQGPRLELLEQGG
Ga0302184_100360951	3300030490	Palsa	GRRLRVRGERGEVLEFVLSPATARFVLAGSAHGPRLELLGGSA
Ga0302183_100743793	3300030509	Palsa	GFERATVLGVHEHGRRLEVAGEDGTVLEFVLNPATARFIHAGGAQGPRLELLEQGG
Ga0311372_105916491	3300030520	Palsa	GRRLEVRGEGGEVLEFVLSRATARFVAAGGGQGPRLELVAGNG
Ga0311355_107472682	3300030580	Palsa	MGVVVAVREEGRRLEVRGEGGEVLEFVLSPATARFVAAGGGQGPRLELLGGLARG
Ga0311356_115004591	3300030617	Palsa	VLAVYDDGRRLHVRDESGELLEFVLNPATARFVSSAGAHGPRLELLGDRRV
Ga0310038_100873843	3300030707	Peatlands Soil	GGSFEPGTVVAVYEEGRRVEVRGEAGGEMLEFVLSAATARFVSAGSAQGPRLELLAEED
Ga0302311_104572821	3300030739	Palsa	GGGFERATVLAVHEHGRRLEVAGEDGTVLEFVLNPATARFIHAGGAQGPRLELLEQGG
Ga0302308_101640611	3300031027	Palsa	GGFERATVLAVHEHGRRLEVAGEDGTVLEFVLNPATARFIHAGGAQGPRLELLEQGG
Ga0302180_101833221	3300031028	Palsa	FERATVLAVHEHGRRLEVAGEDGTVLEFVLNPATARFIHAGGAQGPRLELLEQGG
Ga0302325_132224901	3300031234	Palsa	VLAVHEQGRRLLVRSEAGEMFEFVLSPATARFVHAAGAHGPRLELLAGAP
Ga0302324_10003014913	3300031236	Palsa	EGGTVLAVYDDGRRLHVRDESGELLEFVLNPATARFVSSAGAHGPRLELLSDRRV
Ga0265316_109892351	3300031344	Rhizosphere	HGVVVAVAEEGRRVEVRGEDGEVLAFVLSPATARFMSADSAHGPRLELLGDGA
Ga0272422_12094441	3300031452	Rock	EGRQLTVACESGEVLEFVLSQATARFVASAGRPGPRLELLEP
Ga0272428_10109387	3300031520	Rock	MSVDGEGRQLTVACENGEVLEFVLSQATARFVASAGRPGPRLELLDP
Ga0302326_108532102	3300031525	Palsa	ATVLAVSDDGRRLEVRGEAGEVLEFALSPATARFVSTGGAHGPRLELLGEGDRTT
Ga0302326_118180111	3300031525	Palsa	GGFERGTVVAVHEHGRRLEVVGEDGTALEFVLNPATARFIHAGGAQGPRLELVEDEE
Ga0310686_1131153572	3300031708	Soil	VHFGGGFEPGTVVAVYDEGRRVEVRGEQAGEMLEFVLSSATARFVFAGSAQGPRLELLAD
Ga0265314_103864223	3300031711	Rhizosphere	VSEEGRRVEVRGEDGEVLAFVLSPATARFTSADSAHGPRLELLGEGA
Ga0302321_1009142243	3300031726	Fen	EEGRRLQVRGEAGEVLEFVLSPATARFVSASSAQGPRLELLDKGS
Ga0318568_106056931	3300031819	Soil	VHEDGRRLQVRGEGGEVLEFVLNPATARFVAAGGAHGPRLELLGDS
Ga0310916_107201803	3300031942	Soil	GGFERGVVLAVHEDGRRLQVRGEGGEVLEFVLNPATARFVAAGGAHGPRLELLGDS
Ga0307479_110516173	3300031962	Hardwood Forest Soil	VVLAVEDDGRRVAVRGAGGEVLEFVLSPATARFVHADGAHGPRLELLGG
Ga0318513_106450471	3300032065	Soil	LAVRCHDGELVEFVLNPATARFIAAGSGTGPRLELLDDG
Ga0335075_100170098	3300032896	Soil	VHFGGGVERGTVLAVHEAGRRLEVRDESGQTLEFTLNPATARFVSGAGARGPRLELTGEQ
Ga0335073_114691501	3300033134	Soil	HEEGRELDVRGERGETRRFVLSPATARFTAAGEPGGPRLELLA
Ga0335073_121571182	3300033134	Soil	VLAVHEAGRRLEVRDESGATLEFTLNPATARFVSSAGARGPRLELSGEPA
Ga0334827_150948_585_722	3300034065	Soil	HDGGRRLEVRSDSGELLEFVLNPATAAFTAAGGAGGPRLQLLDRD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F078969

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences