Metagenome / Metatranscriptome Family F079016

Basic Information
Family ID	F079016
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	90 residues
Representative Sequence	MKPGRIDSHEANGCNQELWGELIGIDDRTDQERTFTIYKRSGSLLVVSDTGCERLVGPDHGLSKTRIFQEVMYQFRVHAVRPKPSLYPLTD
Number of Associated Samples	83
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	32.38 %
% of genes near scaffold ends (potentially truncated)	21.55 %
% of genes from short scaffolds (< 2000 bps)	74.14 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Most Common Taxonomy
Group	Bacteria (56.897 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil (18.965 % of family members)
Environment Ontology (ENVO)	Unclassified (33.621 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.897 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.24% β-sheet: 29.41% Coil/Unstructured: 61.34%
Feature Viewer

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Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF00076	RRM_1	40.52
PF00487	FA_desaturase	11.21
PF14259	Obsolete Pfam Family	5.17
PF01979	Amidohydro_1	1.72
PF07683	CobW_C	0.86
PF12844	HTH_19	0.86
PF02073	Peptidase_M29	0.86
PF00534	Glycos_transf_1	0.86
PF00581	Rhodanese	0.86
PF11454	DUF3016	0.86
PF02826	2-Hacid_dh_C	0.86
PF03466	LysR_substrate	0.86
PF02653	BPD_transp_2	0.86
PF00440	TetR_N	0.86
PF13602	ADH_zinc_N_2	0.86
PF16925	TetR_C_13	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	11.21
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	11.21
COG0523	Zinc metallochaperone YeiR/ZagA and related GTPases, G3E family	General function prediction only [R]	0.86
COG2309	Leucyl aminopeptidase (aminopeptidase T)	Amino acid transport and metabolism [E]	0.86

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.76 %
Unclassified	root	N/A	42.24 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.76 %
Unclassified	root	N/A	42.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.90 %
Unclassified	root	N/A	42.24 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.24 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	9.48 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.72 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.24 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	9.48 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.24 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	9.48 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.72 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	0.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.24 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	9.48 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.72 %
Methanotrichales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales	0.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.24 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	9.48 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.72 %
Methanotrichaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae	0.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.24 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	9.48 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.72 %
Methanothrix	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix	0.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16832435	Not Available	1038	Open in IMG/M
3300000789\|JGI1027J11758_12498075	Not Available	813	Open in IMG/M
3300001593\|JGI12635J15846_10029018	All Organisms → cellular organisms → Bacteria	4445	Open in IMG/M
3300001867\|JGI12627J18819_10005168	All Organisms → cellular organisms → Bacteria	4950	Open in IMG/M
3300001867\|JGI12627J18819_10062111	All Organisms → cellular organisms → Bacteria	1555	Open in IMG/M
3300001867\|JGI12627J18819_10398681	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	559	Open in IMG/M
3300002245\|JGIcombinedJ26739_100537163	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300002906\|JGI25614J43888_10001879	All Organisms → cellular organisms → Bacteria	6392	Open in IMG/M
3300002914\|JGI25617J43924_10084371	Not Available	1150	Open in IMG/M
3300004137\|Ga0058883_1541109	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300004139\|Ga0058897_10959614	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300004631\|Ga0058899_12221144	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300005332\|Ga0066388_101917286	Not Available	1058	Open in IMG/M
3300005434\|Ga0070709_10142163	Not Available	1650	Open in IMG/M
3300005602\|Ga0070762_10166673	Not Available	1329	Open in IMG/M
3300005602\|Ga0070762_10956899	Not Available	586	Open in IMG/M
3300005921\|Ga0070766_10514557	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	796	Open in IMG/M
3300006175\|Ga0070712_100906974	Not Available	760	Open in IMG/M
3300006893\|Ga0073928_10000172	All Organisms → cellular organisms → Bacteria	153912	Open in IMG/M
3300006893\|Ga0073928_10001725	All Organisms → cellular organisms → Bacteria	40661	Open in IMG/M
3300006893\|Ga0073928_10018543	All Organisms → cellular organisms → Bacteria	7291	Open in IMG/M
3300010043\|Ga0126380_10145832	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1507	Open in IMG/M
3300010048\|Ga0126373_10028834	All Organisms → cellular organisms → Bacteria	4781	Open in IMG/M
3300010048\|Ga0126373_10210647	All Organisms → cellular organisms → Bacteria	1889	Open in IMG/M
3300010048\|Ga0126373_11195000	Not Available	827	Open in IMG/M
3300010376\|Ga0126381_101080342	Not Available	1159	Open in IMG/M
3300010937\|Ga0137776_1291586	Not Available	903	Open in IMG/M
3300011120\|Ga0150983_10910215	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300011120\|Ga0150983_14586442	Not Available	566	Open in IMG/M
3300011404\|Ga0153951_1025826	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300012202\|Ga0137363_10181737	All Organisms → cellular organisms → Bacteria	1675	Open in IMG/M
3300012362\|Ga0137361_11203649	Not Available	680	Open in IMG/M
3300016294\|Ga0182041_11902924	Not Available	553	Open in IMG/M
3300016341\|Ga0182035_10710609	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	876	Open in IMG/M
3300016341\|Ga0182035_11118454	Not Available	701	Open in IMG/M
3300016371\|Ga0182034_10666749	Not Available	882	Open in IMG/M
3300016422\|Ga0182039_10130588	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1912	Open in IMG/M
3300017970\|Ga0187783_10127336	All Organisms → cellular organisms → Bacteria	1877	Open in IMG/M
3300020140\|Ga0179590_1082013	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300020583\|Ga0210401_11365073	Not Available	566	Open in IMG/M
3300021046\|Ga0215015_10417503	All Organisms → cellular organisms → Bacteria	1301	Open in IMG/M
3300021168\|Ga0210406_10162186	All Organisms → cellular organisms → Bacteria	1872	Open in IMG/M
3300021168\|Ga0210406_10351101	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300021170\|Ga0210400_10606080	Not Available	903	Open in IMG/M
3300021171\|Ga0210405_11322444	Not Available	528	Open in IMG/M
3300021178\|Ga0210408_10365482	Not Available	1150	Open in IMG/M
3300021358\|Ga0213873_10062120	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300021358\|Ga0213873_10174970	Not Available	656	Open in IMG/M
3300021361\|Ga0213872_10055688	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1792	Open in IMG/M
3300021361\|Ga0213872_10106580	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300021361\|Ga0213872_10209876	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	832	Open in IMG/M
3300021372\|Ga0213877_10002764	All Organisms → cellular organisms → Bacteria	3923	Open in IMG/M
3300021372\|Ga0213877_10217836	Not Available	625	Open in IMG/M
3300021377\|Ga0213874_10016626	All Organisms → cellular organisms → Bacteria → Acidobacteria	1962	Open in IMG/M
3300021384\|Ga0213876_10094300	All Organisms → cellular organisms → Bacteria	1585	Open in IMG/M
3300021388\|Ga0213875_10084313	All Organisms → cellular organisms → Bacteria	1483	Open in IMG/M
3300021402\|Ga0210385_10607698	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	834	Open in IMG/M
3300021420\|Ga0210394_10218591	All Organisms → cellular organisms → Bacteria	1664	Open in IMG/M
3300021420\|Ga0210394_11445201	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	583	Open in IMG/M
3300021432\|Ga0210384_10847696	Not Available	813	Open in IMG/M
3300021441\|Ga0213871_10004375	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix	2820	Open in IMG/M
3300021441\|Ga0213871_10077595	Not Available	947	Open in IMG/M
3300021441\|Ga0213871_10251058	Not Available	562	Open in IMG/M
3300021444\|Ga0213878_10005298	All Organisms → cellular organisms → Bacteria → Acidobacteria	4521	Open in IMG/M
3300021444\|Ga0213878_10012120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3079	Open in IMG/M
3300021560\|Ga0126371_10140353	All Organisms → cellular organisms → Bacteria	2467	Open in IMG/M
3300021560\|Ga0126371_12580208	Not Available	615	Open in IMG/M
3300022498\|Ga0242644_1039597	Not Available	531	Open in IMG/M
3300022557\|Ga0212123_10000222	All Organisms → cellular organisms → Bacteria	193203	Open in IMG/M
3300022557\|Ga0212123_10001581	All Organisms → cellular organisms → Bacteria	62455	Open in IMG/M
3300022557\|Ga0212123_10002274	All Organisms → cellular organisms → Bacteria	47131	Open in IMG/M
3300022717\|Ga0242661_1033802	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300026319\|Ga0209647_1007205	All Organisms → cellular organisms → Bacteria	7850	Open in IMG/M
3300026551\|Ga0209648_10047331	All Organisms → cellular organisms → Bacteria	3699	Open in IMG/M
3300027061\|Ga0209729_1025736	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300027326\|Ga0209731_1031182	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	775	Open in IMG/M
3300027371\|Ga0209418_1008608	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1555	Open in IMG/M
3300027502\|Ga0209622_1081306	Not Available	593	Open in IMG/M
3300027505\|Ga0209218_1144290	Not Available	503	Open in IMG/M
3300027609\|Ga0209221_1002113	All Organisms → cellular organisms → Bacteria	4996	Open in IMG/M
3300027884\|Ga0209275_10052353	All Organisms → cellular organisms → Bacteria	1968	Open in IMG/M
3300027895\|Ga0209624_10303007	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300028047\|Ga0209526_10365851	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300028047\|Ga0209526_10681591	Not Available	649	Open in IMG/M
3300029636\|Ga0222749_10146305	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300030730\|Ga0307482_1007525	All Organisms → cellular organisms → Bacteria	1865	Open in IMG/M
3300030730\|Ga0307482_1262994	Not Available	545	Open in IMG/M
3300030803\|Ga0074037_1685822	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300030845\|Ga0075397_10974773	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300030852\|Ga0075389_11381404	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300030923\|Ga0138296_1244291	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300031474\|Ga0170818_107730382	Not Available	654	Open in IMG/M
3300031561\|Ga0318528_10707849	Not Available	539	Open in IMG/M
3300031573\|Ga0310915_10571569	Not Available	802	Open in IMG/M
3300031715\|Ga0307476_10073694	All Organisms → cellular organisms → Bacteria	2373	Open in IMG/M
3300031715\|Ga0307476_10487670	Not Available	913	Open in IMG/M
3300031718\|Ga0307474_10627681	Not Available	847	Open in IMG/M
3300031753\|Ga0307477_10281599	All Organisms → cellular organisms → Bacteria	1149	Open in IMG/M
3300031764\|Ga0318535_10457882	Not Available	568	Open in IMG/M
3300031890\|Ga0306925_11961164	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300032042\|Ga0318545_10295904	Not Available	582	Open in IMG/M
3300032076\|Ga0306924_10388799	All Organisms → cellular organisms → Bacteria	1598	Open in IMG/M
3300032261\|Ga0306920_101640269	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300032756\|Ga0315742_10421355	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300032756\|Ga0315742_11834871	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.93%
Host-Associated	Host-Associated	12.07%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.90%
Plants	Host-Associated → Plants	11.21%
Aquatic	Environmental → Aquatic	6.03%
Fungi	Host-Associated → Fungi	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.62%
Thermal Springs	Environmental → Aquatic → Thermal Springs	6.03%
Roots	Host-Associated → Plants → Roots	2.59%
Mycelium	Host-Associated → Fungi → Mycelium	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.03%
Loam	Environmental → Terrestrial → Soil → Loam	25.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.62%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	6.03%
Unclassified	Host-Associated → Plants → Roots → Unclassified	2.59%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.86%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	36.21%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	23.28%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.62%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	5.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.17%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	2.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.72%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.86%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.86%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	18.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	8.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.03%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.03%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	5.17%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	5.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.45%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.45%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.59%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.72%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.86%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.86%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004137	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011404	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ035 MetaG	Host-Associated	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021441	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1	Host-Associated	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022498	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027061	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027326	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030803	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Mineral C3 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030845	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA7 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030852	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB2 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030923	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03783420	2088090014	Soil	MKLGRLDSHKTNGCAQGLWGELIGIDDRTDQERTFTIYKRSGSLLVVSDTGCERLVGPDHGLNKTRIFQEVMQQFRVHAVRPKPSLYPLSD
JGI1027J11758_124980752	3300000789	Soil	MKLGRLDSHKTNGCAQGLWGELIGIDDRTDQERTFTIYKRSGSLLVVSDTGCERLVGPDHGLNKTRIFQEVMQQFRVHAVRPKPSLYPLSD*
JGI12635J15846_100290184	3300001593	Forest Soil	MDSHETNGCAQELWGELIGIDDRTDQERTFTIYKRGGSLLVVSDTGCERLVGPDHGLSKTRIFQEVMYQFRVHAVRPKPSLYPLAD*
JGI12627J18819_100051685	3300001867	Forest Soil	MKPGKIDSDKTDDCAQALWGELVGIDDITGHERTFTVYKRSGSLLIVSDTGCERLAGPDHGLSKTRIFQEVMNQFSVHAVRRTSSFDAPPA*
JGI12627J18819_100551042	3300001867	Forest Soil	MTAQAGLFSVALANSVQVRLCVSSMKSGKIDPEEANSCAQELWGELIGIDDRTDRERTFTIYKRSGSLLIVSDSGCERLAGPDEGLSKTRIFQEVMDQFDVHAVRRKR*
JGI12627J18819_100621111	3300001867	Forest Soil	MKSGKIDSEEANRCAQELWGELIGIDDRTDRERTFTIYKRSGSLLIVSDSGCERLAGPDEGLSKTRIFQEVMDQFDVHAVRRKR*
JGI12627J18819_101696472	3300001867	Forest Soil	MTAQAGLFSVAIASSVQVRLSVSSMKSGKIDPEQAKSCAQELWGELIGIDDRTDRERTFTIYKRSGSLLIVSDSGCERLAGPDEGLSKTRIFQEVMDQFDVHAVRRKR*
JGI12627J18819_103986811	3300001867	Forest Soil	ASSAQVRLFVSSMKSGKIDPEEANSCTQELWGELIGIDDRTDRERTFTIYKRSGSLLIVSDSGCERLAGPDEGLSKTRIFQEVMDQFDVHAVRRKR*
JGIcombinedJ26739_1005371632	3300002245	Forest Soil	MKPERMDSDEASGCAQELWGELIGIDDRTDQERTFTIYKRSGSLLVVSDTGCERLVGPDHGLSKTRIFQEVMYQFRVHAVRPKPALYPLAD*
JGI25614J43888_100018797	3300002906	Grasslands Soil	MKPGEIDSDETNDRVQELWGELTGIDDRTDQERTFTIYKRSGSLLVISDTGCERLVGPDQGLSKTRIFQEVMYQFRVHAVRPKPSFYPLSD*
JGI25617J43924_100843712	3300002914	Grasslands Soil	MKPGEIDSERNDCVQELWGELTGIDDRTDQERTFTIYKRSGSLLVISDTGCERLVGPDQGLSKTRIFQEVMYQFRVHAVRPKPSFYPLSD*
Ga0058883_15411092	3300004137	Forest Soil	MKPGEIDSKRHDCVQELWGELTGIDDRTDQERTFTIYKRSGSLLVISDTGCERLVGPDQGLSKTRIFQEVMYQFRVHAVRPKPSFYPLSD*
Ga0058897_109596142	3300004139	Forest Soil	MKPGQIDSEKNDCVQELWGELTGIDDRTDQERTFTIYKRSGSLLVISDTGCERLVGPDQGLSKTRIFQEVMYQFRVHAVRPKPSFYPLSD*
Ga0058899_122211442	3300004631	Forest Soil	MKPGQIDSERNDCVQELWGELTGIDDRTDQERTFTIYKRSGSLLVISDTGCERLVGPDQGLSKTRIFQEVMYQFRVHAVRPKPSFYPLSD*
Ga0066388_1019172863	3300005332	Tropical Forest Soil	MPNGCARELWGELTGIDDRTDQERVFTIYKRGGGPLIVSDTGCERLAGPDNGLSKTRIFQEVTHQFRVHGIRLKPLFYDQPD*
Ga0070709_101421634	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKSGKIDPEEASSCAQELWGELIGIDDRTDRERTFTIYKRSGSLLIVSDSGCERLAGPDEGLSKTRIFQEVMDQFDVHAVRRKR*
Ga0070762_101666733	3300005602	Soil	MDSDEASGCAQELWGELIGIDDRTDQERTFTIYKRSGSLLVVSDTGCERLVGPDHGLSKTRIFQEVMYQFRVHAVRPKPALYPLAD*
Ga0070762_109568991	3300005602	Soil	GQIDSERNDCVQELWGELTGIDDRTDQERTFTIYKRSGSLLVISDTGCERLVGPDQGLSKTRIFQEVMYQFRVHAVRPKPSFYPLSD*
Ga0070766_105145571	3300005921	Soil	MKPGKIDSDKMNDSAQALWGELVGIDDSTGEERTFTVYKCSGSLLIISDTGCERLAGPDHGLSKTRIFQEVMNQFSVHAVRRTSSFDALPG*
Ga0070712_1009069743	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKSGKIDPEEASSCAQELWGELIGIDDRTDRERTFTIYKRSGSLLIVSDSGCERLAGPDEGLSKTRIFQEVMDQFD
Ga0073928_1000017233	3300006893	Iron-Sulfur Acid Spring	MKPGRIETNSCAQELWGELIGIDDRTDQERTFTIYKRSGSLLVVSDTGCERLVGPDHGLSKTRIFQEVMYQFRVHAVRPNPSFCPVSD*
Ga0073928_1000172519	3300006893	Iron-Sulfur Acid Spring	MDSHEANGCAQELWGELIGIDDRTDQERTFTIYKRSGSLLVVSDTGCERLVGPDHGLSKTRIFQEVMYQFRVHAVRPKPSLYPLAD*
Ga0073928_100185439	3300006893	Iron-Sulfur Acid Spring	MKPGRADSHEANVGAQELWRELIGIDDRTDQERTFTIYKRSGSLLVVSDTGCERLVGPDHGLSKAHIFQEVMNQFGVHAVRPKPSLYPLPD*
Ga0126380_101458322	3300010043	Tropical Forest Soil	MKSEKIDPEEANSCPQELWGELIGIDDTTDRERTFTIYKRSGSLLIVSDSGCERLAGPDEGLSKTRIFQEVMDQFDVHAVRRKR*
Ga0126373_100288342	3300010048	Tropical Forest Soil	MKSVKIDSEEANSCAEELWGELIGIDDRTDRERTFTIYKRSGSLLIVSDSGCERLAGPDEGLSKTRIFQEVMDQFDVHAVRRKR*
Ga0126373_102106473	3300010048	Tropical Forest Soil	MKPEKIDSDDANGCARELWGELTGIDDRTDQERVFTIYKRGGGPLIVSDTGCERLAGPDNGLSKTRIFQEVTHQFRVHGIRLKPLFYDQPD*
Ga0126373_111950001	3300010048	Tropical Forest Soil	MKSEKIDPEEANSCPQELWGELIGIDDTTDRERTFTIYKRSGSLLIVSDSGCERLAGPDEGLSKTRIFQEVMDQFDV
Ga0126381_1010803422	3300010376	Tropical Forest Soil	MKPEKIDSDDANGCARELWGELTGIDDRTDQERVFTIYKRGGGPLIVSDTGCERLGGPDNGLSKTRIFQEVTHQFRVHGIRLKPLFYDQPD*
Ga0137776_12915862	3300010937	Sediment	VQLAVSYMKPKIDSEKTTDPAQALWGELVGIDDITGHERTFTVYKRSGSLLIVSDTGCERLAGPDQGLSKTRIFQEVMNQFSVHAVRRTSSLDVLPG*
Ga0150983_109102151	3300011120	Forest Soil	MKPGRTDSHGANGGAQELWRELIGIDDRTDQERTFTIYKRSGSLLVVSDTGCERLVGPDHGLSKTRIFQEVMYQFRVHAV
Ga0150983_145864422	3300011120	Forest Soil	MKPGRTDSHEANSVAQELWRELIGIDDRTDQERTFTIYKRSGSLLVVSDTGCERLVGPDHGLSKAHIFQEVMNQFGVHAVRPKPSLYPLPD*
Ga0153951_10258261	3300011404	Attine Ant Fungus Gardens	VQLAVSYMKPGKIDSDKTNDSAQALWGELVGIDDITGHERTFTVYKRSGSLLIVSDTGYERLAGPDQGLSKTRIFQEVMNQFSVHAVRRTSS
Ga0137363_101817372	3300012202	Vadose Zone Soil	VQLADSFMKPGEIDSERNDCVQELWGELTGIDDRTDQERTFTIYKRSGSLLVISDTGCERLVGPDQGLSKTRIFQEVMYQFRVHAVRPKPSFYPLSD*
Ga0137361_112036492	3300012362	Vadose Zone Soil	MKPGEIDSDKTNDRVQELWGELTGIDDRTDQERTFTIYKRSGSLLVISDTGCERLVGPDQGLSKTRIFQEVMYQFRVHAVRPKPSFYPLSD*
Ga0182041_115209172	3300016294	Soil	MTAQAVLFSVAGASSVSSMKPGRIDSDGANGCAQELWGQLIGIDDRTDQERIFTIYKRSGSLLIVSDTGCERLAGPDNGLSKTRIFQEVTHQFRVHGIRLKPLFYDQPD
Ga0182041_119029242	3300016294	Soil	VKPGKNDSVEAGGCAQELWGELIGFDDETDQERTFTIYRRGGSLLIVSDAGHERLAGPDNGLSKADIFREVMDQFQVHAVRRKPSFYAPPG
Ga0182035_107106092	3300016341	Soil	MKSVKIDSEEANSCAEELWGELIGIDDRTDRERTFTIYKRSGSLLIVSDSGCERLAGPDEGLSKTRIFHEVMDQFDVHAVRRKR
Ga0182035_111184541	3300016341	Soil	MKPGRIDSDGANGCAQKLWGELIGIDDRTDQERIFTIYKQSGSLLIVSDTGCERLAGPDHGLSKTRIFQEVMDQFRVHGLRPKPWFCGQPN
Ga0182034_106667492	3300016371	Soil	DGANGCAQKLWGELIGIDDRTDQERIFTIYKQSGSLLIVSDTGCERLPGPDHGLSKTRIFQEVMDQFRVPGLRSKPSFCGRPG
Ga0182039_101305883	3300016422	Soil	VKPGKNDSVEAGGCAQELWGELIGFDDETDQERTFTIYRRGGSLLIVSDAGHERLGPDNGLSKADIFREVMDQFQVHAVGRKPSF
Ga0187783_101273361	3300017970	Tropical Peatland	MKSGKIDSDEANSCAQELWGQLIGIDDRTDRERTFAIYKRDGSLLIVSDTGCERLAGPDHGLSKTRIFQEVMQQFHVHAVRRKAPFYALPS
Ga0179590_10820131	3300020140	Vadose Zone Soil	MKPGRTDSHEANGVAQELWRELIGIDDRTDQERTFTIYKRGGSLLVVSDTGCERLVGPDHGLSKAHIFQEVMNQFGVHAVRPKPSLYSLPD
Ga0210401_113650732	3300020583	Soil	MKPGEIDSKRHDCVQELWGELTGIDDRTDQERTFTIYKRSGSLLVISDTGCERLVGPDQGLSKTRIFQEVMYQFRVHAVRPKPSFYPLSD
Ga0215015_104175033	3300021046	Soil	MKPGEIDSDETNDRVQELWGELTGIDDRTDQERTFTIYKRSGSLLVISDTGCERLVGPDQGLSKTRIFQEVMYQFRVHAVRPKPSFYPLSD
Ga0210406_101621863	3300021168	Soil	MKPGQIDSEKNDCVQELWGELTGIDDRTDQERTFTIYKRSGSLLVISDTGCERLVGPDQGLSKTRIFQEVMYQFSVHAVRPKPSFYPLSD
Ga0210406_103511013	3300021168	Soil	MKPGRADSHEANGAAQELWRELIGIDDRTDQERTFTIYKRSGSLLVVSDTGCERLVGPDHGLSKAHIFQEVMNQFGVHAVRPKPLLYPLPD
Ga0210400_106060802	3300021170	Soil	MKPGRTDSPEANGGAQELWRELIGIDDRTDQERTFTIYKRSGSLLVVSDTGCERLVGPDHGLSKTHIFQEVMNQFGVHSVRPKPLLYPLPD
Ga0210405_113224442	3300021171	Soil	MKPGQIDSDKTNDRVQELWGELTGIDDRTDQERTFTIYKRSGSLLVISDTGCERLVGPDQGLSKTRIFQEVMYQFRVHAVRPKPSFYPLSD
Ga0210408_103654823	3300021178	Soil	RVQELWGELTGIDDRTDQERTFTIYKRSGSLLVISDTGCERLVGPDQGLSKTRIFQEVMYQFSVHAVRPKPSFYPLSD
Ga0213873_100621202	3300021358	Rhizosphere	MKTGRSHSDETSGCTQVLWGELIGIDDSTGQERTFSVYKRTGSLLIISDTGCERLAGPDHGLSKSRIFQEVMDQFSVHAVRRKPSLYVLPD
Ga0213873_101749701	3300021358	Rhizosphere	KSGKIDTDEGSPRSQELWGELIGIDDRTAQERTFTIYKRSGSLLIVSDAGCERLAGPDRGLSKTRIFQEVMDQFRVHAVRRKSSFYPQPS
Ga0213872_100116903	3300021361	Rhizosphere	MMTAEAGLFSVAIASSVQARLSVSAMKSVKIDSGEANSCAEELWGELIGIDDRTDRERTFTIYKRSGSLLIVSDSGCERLAGPDEGLSKTRIFQEVMDQFDVHAVRRKR
Ga0213872_100556882	3300021361	Rhizosphere	MDTDEGNPRSQELWGELIGIDDRTDQERTFTIYKRSGSLLIVSDAGCERLAGPDRGLSKTRIFQEVMDQFRVHAVRRKSSFYPQPS
Ga0213872_101065802	3300021361	Rhizosphere	MKPGRIHSGEANGCAEELWGELIGIDDRTGQERTFTIYKRTGSLLIISDTGCERLAGPDHGLSKSRIFQEVMDQFRVHAVRRKPSPYALPD
Ga0213872_102098762	3300021361	Rhizosphere	MKSGRTHSGEANDCAQELWGELIGIDDRTGQERTFTIYKRTGSLLIVSDTGCERLAGPDHGLSKSRIFQEVMDQFSVHAVRRKPSLYVLPD
Ga0213877_100027641	3300021372	Bulk Soil	SVCAQELWGELVGIDNKTGQERTFTIYKGAGSLLIVSDTGCERLAGPDHGLSKSRIFQEVMDQFNVHAVRRKPSLYALPD
Ga0213877_102178362	3300021372	Bulk Soil	MQLTISSMKQRKIDSDEANGGVQELWGELIGIDDRTDQERTFTVYKRNGSLLIVSDTGCERLAGPDDGLSKTHIFQEVMYQFRVHAVRRKPSFYALPG
Ga0213874_100166263	3300021377	Plant Roots	MKPRKTGSDDANECPPELWGELIGIDNKTDQERIFTIYRRSGSLLIVSDTGWERLAGPDHGLRKSDIFQEVMSQFCVHAVRRKRSL
Ga0213876_100943002	3300021384	Plant Roots	MKSGKIDPGEASSCPQELWGELIGIDDTTDRERTFTIYKRSGSLLIVSDSGCERLAGPDEGLSKTRIFQEVMDQFDVHAVRRKR
Ga0213875_100843132	3300021388	Plant Roots	MKSGKIDPEEANSCSQELWGELIGIDDTTDRERTFTIYKRSGSLLIVSDSGCERLAGPDEGLSKTRIFQEVMDQFDVHAVRRKR
Ga0210385_106076982	3300021402	Soil	MKSGKIDPEEAGSCAQELWGELIGIDDRTDRERTFTIYKRSGSLLIVSDSGCERLAGPDEGLSKTRIFQEVMDQFDVHAVRRKR
Ga0210394_102185913	3300021420	Soil	MKPGQIDTEKNDCVQELWGELTGIDDRTDQERTFTIYKRSGSLLVISDTGCERLVGPDQGLSKTRIFQEVMYQFSVHAVRPKPSFYPLSD
Ga0210394_114452011	3300021420	Soil	FGSGSLCVSSMKSGKIDPEEASSCAQELWGELIGIDDRTDRERTFTIYKRSGSLLIVSDSGCERLAGPDEGLSKTRIFQEVMDQFDVHAVRRKR
Ga0210384_108476962	3300021432	Soil	MKPERADSHEANGGAQELWRELIGIDDRTDRERTFTIYKRSGSLLVVSDTGSERLVGPDHGLSKAHIFQEVMNQFGVHAVRPKPSLYPLPD
Ga0213871_100043754	3300021441	Rhizosphere	MKPSRIHSGDGSVCAQELWGELVGIDNKTGQERTFTIYKGAGSLLIVSDTGCERLAGPDHGLSKSRIFQEVMDQFNVHAVRRKPSLYALPD
Ga0213871_100775952	3300021441	Rhizosphere	MKSGKIDTDEGSPRSQELWGELIGIDDRTAQERTFTIYKRSGSLLIVSDAGCERLAGPDRGLSKTRIFQEVMDQFRVHAVRRKSSFYPQPS
Ga0213871_100779362	3300021441	Rhizosphere	SFPTMTALAGLFSVAIASLVQVRLFLSSMKPGKIDSEEANSCAEELWGELIGIDDRTDRERTFTIYKRSGSLLIVSDSGCERLAGPDEGLSKTRIFQEVMDQFDVHAVRRKR
Ga0213871_102510582	3300021441	Rhizosphere	MKPGRIHSGEANGCAEELWGELIGIDDRTGQERTFTIYKRTGSLLIISDTGCERLAGPDHGLSKSRIFQEVMDQFRVHAVRR
Ga0213878_100052985	3300021444	Bulk Soil	MKPGRIHSGDASGCAQELWGELIGIDNRTGQERTFSVYKQTGSLLIVSDTGCERLAGPDHGLNKSRIFQEVMDQFSVHAVRRKPSLYALPD
Ga0213878_100121205	3300021444	Bulk Soil	MKPGRIHSGEANGCAEELWGELIGIDDRTGQERTFTIYKRTGSLLIISDTGCERLAGPDHGLSKSRIFQEVMDQFRVHAVRRKPSPYAL
Ga0213878_101112592	3300021444	Bulk Soil	MTAGAALFSVDAANSFFGWVFFSSMKPGRIHSSEASGCAEEVWGELVGIDNGTGQERTFTIYKRTGSLLIVSDTGCERLAGPDHGLSKSRIFQEVMDQFCVHAVRRKPSLYALPD
Ga0213878_103152891	3300021444	Bulk Soil	MTALAALFSVAIASLVQVRLFLSSMKPGKIDSEEANSCAEELWGELIGIDDRTDRERTFTIYKRSGSLLIVSDSGCERLAGPDEGLSKTRIFQEVMDQFDVHAVRRKR
Ga0126371_101403532	3300021560	Tropical Forest Soil	MKSVKIDSEEASSCAEELWGELIGIDDRTDRERTFTIYKRSGSLLIVSDSGCERLAGPDEGLSKTRIFQEVMDQFDVHAVRRKR
Ga0126371_125802082	3300021560	Tropical Forest Soil	MKSEKIDPEEANSCPQELWGELIGIDDTTDRERTFTIYKRSGSLLIVSDSGCERLAGPDEGLSKTRIFQEVMDQFDVHAVRRKR
Ga0242644_10395971	3300022498	Soil	MKSGKIDPEEASSCAQELWGELIGIDDRTDRERTFTIYKRSGSLLIVSDSGCERLAGPDEGLSKTRIFQEVMDQ
Ga0212123_10000222140	3300022557	Iron-Sulfur Acid Spring	MKPGRIETNSCAQELWGELIGIDDRTDQERTFTIYKRSGSLLVVSDTGCERLVGPDHGLSKTRIFQEVMYQFRVHAVRPNPSFCPVSD
Ga0212123_1000158133	3300022557	Iron-Sulfur Acid Spring	MDSHEANGCAQELWGELIGIDDRTDQERTFTIYKRSGSLLVVSDTGCERLVGPDHGLSKTRIFQEVMYQFRVHAVRPKPSLYPLAD
Ga0212123_1000227413	3300022557	Iron-Sulfur Acid Spring	MKPGRADSHEANVGAQELWRELIGIDDRTDQERTFTIYKRSGSLLVVSDTGCERLVGPDHGLSKAHIFQEVMNQFGVHAVRPKPSLYPLPD
Ga0242661_10338022	3300022717	Soil	MKPGEIDSDKANDRVQELWGELTGIDDRTDQERTFTIYKRSGSLLVISDTGCERLVGPDQGLSKTRIFQEVMYQFRVHAVRPKPSFYPLSD
Ga0209647_100720510	3300026319	Grasslands Soil	MKPGEIDSDKTNDRVQELWGELTGIDDRTDQERTFTIYKRSGSLLVISDTGCERLVGPDQGLSKTRIFQEVMYQFRVHAVRPKPSFYPLSD
Ga0209648_100473316	3300026551	Grasslands Soil	MKPGEIDSERNDCVQELWGELTGIDDRTDQERTFTIYKRSGSLLVISDTGCERLVGPDQGLSKTRIFQEVMYQFRVHAVRPKPSFYPLSD
Ga0209729_10257362	3300027061	Forest Soil	MKPGKIDSDKTDDCAQALWGELVGIDDITGHERTFTVYKRSGSLLIVSDTGCERLAGPDHGLSKTRIFQEVMNQFSVHAVRRTSSFDAPPA
Ga0209731_10311821	3300027326	Forest Soil	SSVQVRLSVSSMKSGKIDPEQAKSCAQELWGELIGIDDRTDRERTFTIYKRSGSLLIVSDSGCERLAGPDEGLSKTRIFQEVMDQFDVHAVRRKR
Ga0209418_10086082	3300027371	Forest Soil	MKSGKIDSEEANSCPQELWGELIGIDDTTDRERTFTIYKRSGSLLIVSDSGCERLAGPDEGLSKTRIFQEVMDQFDVHAVRRKR
Ga0209622_10813061	3300027502	Forest Soil	MKSGKIDSEEAHRCAQELWGELIGIDDRTDRERTFTIYKRSGSLLIVSDSGCERLAGPDEGLSKTRIFQEVMDQFDVHAVRRKR
Ga0209218_11442902	3300027505	Forest Soil	DSDEASGCAQELWGELIGIDDRTDQERTFTIYKRSGSLLVVSDTGCERLVGPDHGLSKTRIFQEVMYQFRVHAVRPKPALYPLAD
Ga0209003_10603282	3300027576	Forest Soil	MTAQAGIFSVAIASSVQVRLSVSSMKSGKIDPEQAKSCAQELWGELIGIDDRTDRERTFTIYKRSGSLLIVSDSGCERLAGPDEGLSKTRIFQEVMDQFDVHAVRRKR
Ga0209221_10021135	3300027609	Forest Soil	MDSHETNGCAQELWGELIGIDDRTDQERTFTIYKRGGSLLVVSDTGCERLVGPDHGLSKTRIFQEVMYQFRVHAVRPKPSLYPLAD
Ga0209275_100523533	3300027884	Soil	MKPGQIDSERNDCVQELWGELTGIDDRTDQERTFTIYKRSGSLLVISDTGCERLVGPDQGLSKTRIFQEVMYQFRVHAVRPKPSFYPLSD
Ga0209624_103030072	3300027895	Forest Soil	MDSDEASGCAQELWGELIGIDDRTDQERTFTIYKRSGSLLVVSDTGCERLVGPDHGLSKTRIFQEVMYQFRVHAVRPKPALYPLAD
Ga0209526_103658512	3300028047	Forest Soil	MKPGEIDSDKTNDRVQELWGELTGIDDRTDQERTFTIYKRSGSLLVISDTGCERLVGPDQGLSKTRIFQEVMYQFRVHAVRPKPSFCPLSD
Ga0209526_106815911	3300028047	Forest Soil	RTDSHGANGGAQELWRELIGIDDRTDQERTFTIYKRSGSLLVVSDTGCERLVGPDHGLSKTHIFQEVMNQFGVHSVRPKPSLYPLPD
Ga0222749_101463052	3300029636	Soil	MKPGRADSHEANGGAQELWRELIGIDDRTDQERTFTIYKRSGSLLVVSDTGSERLVGPDHGLSKAHIFQEVMNQFGVHAVRPKPSLYPLPD
Ga0307482_10075252	3300030730	Hardwood Forest Soil	MKPGKIDSDKTDDCAQALWGELVGIDDITGHQRTFTVYKRSGSLLIVSDTGCERLAGPDHGLSKTRIFQEVMNQFSVHAVRRTSSFDAPPA
Ga0307482_12629942	3300030730	Hardwood Forest Soil	MKPGRADSHEANGGAQELWRELIGIDDRTDQERTFTIYKRSGSLLVVSDTGCERLVGPDHGLSKAHIFQEVMNQFGVHAVRPKPSLYPLPG
Ga0074037_16858222	3300030803	Soil	MKPGEIDSDKTNGRVQELWGELTGIDDRTDQERTFTIYKRSGSLLVISDTGCERLVGPDQGLSKTRIFQEVMYQFRVHAVRPKPSFYPLSD
Ga0075397_109747731	3300030845	Soil	MKPGRTDSHEANSVAQELWRELIGIDDRTDQERTFTIYKRSGSLLVVSDTGCERLVGPDHGLSKAHIFQEVMNQFGVHAVRPKPLLYPLPD
Ga0075389_113814041	3300030852	Soil	MKPGRTDSHEANNGAQELWRELIGIDDRTDQERTFTIYKRSGSLLVVSDTGCERLVGPDHGLSKAHIFQEVMNQFGVHAVRPKPSLYPLPD
Ga0138296_12442913	3300030923	Soil	MKPGRADSHEVNGAAQELWRELIGIDDRTDQERTFTIYKRSGSLLVVSDTGCERLVGPDHGLSKAHIFQEVMNQFGVHAVRPKPLLYPLPD
Ga0170818_1077303821	3300031474	Forest Soil	DKTNDRVQELWGELTGIDDRTDQERTFTIYKRSGSLLVVSDTGCERLVGPDHGLSKAHIFQEVMNQFGVHAVRPKPSLYPLPD
Ga0318528_107078491	3300031561	Soil	VKPGKNDSVEAGGCAQELWGELIGFDDETDQERTFTIYRRGGSLLIVSDAGHERLAGPDNGLSKADIFREVMDQFQVHAVRWKPSF
Ga0310915_105715692	3300031573	Soil	VKPGKNDSVEAGGCAQELWGELIGFDDETDQERTFTIYRRGGSLLIVSDAGHERLAGPDNGLSKADIFREVMDQFQVHAVRRKPSF
Ga0307476_100736943	3300031715	Hardwood Forest Soil	MDSHEANGVDQELWGELIGIDDRTDQERTFTIYKRSGSLLVVSDTGCERLVGPDHGLSKTRIFQEVMYQFRVHAVRPKPSLYPLTD
Ga0307476_104876702	3300031715	Hardwood Forest Soil	MKPGRTDSHEANSGAQELWRELIGIDDRTDQERTFTIYKRSGSLLVVSDTGCERLVGPDHGLSKAHIFQEVMNQFGVHAVRPKPSLYPLPG
Ga0307476_113016172	3300031715	Hardwood Forest Soil	MTDQAGLFSVAIASSVQVRLSVSSMKSGKIDPEEANSCAQELWGELIGIDDRTDRERTFTIYKRSGSLLIVSDSGCERLAGPDEGLSKTRIFQEVMDQFDVHAVRRKR
Ga0307474_106276813	3300031718	Hardwood Forest Soil	MKPGRIDSHEANGCNQELWGELIGIDDRTDQERTFTIYKRSGSLLVVSDTGCERLVGPDHGLSKTRIFQEVMYQFRVHAVRPKPSLYPLTD
Ga0306917_114896472	3300031719	Soil	MTEGAALFSVAVGNSVSVRFSFSSMKSGRTHSDEANGCAQELWGELIGIDDRTGQERTFTIYKRTGSLLIVSDTGCERLAGPDHGLSKSRIFQEVMDQFSVHAVRRKPSLYALPD
Ga0307477_102815992	3300031753	Hardwood Forest Soil	MKPGKIDSDKTDDCAQALWGELVGIDDITGHQRTFTVYKRSGSLLIVSDTGCERLAGPDHGLSKTRIFQEVMNQFSVHAVRRT
Ga0318535_104578821	3300031764	Soil	VKPGKNDSVEAGGCAQELWGELIGFDDETDQERTFTIYRRGGSLLIVSDAGHERLAGPDNGLSKADIFREVMDQFQVHAVGRKPSF
Ga0306925_119611642	3300031890	Soil	MKPEKIDSDDANGCARELWGELTGIDDRTDQERVFTIYKRGGGPLIVSDTGCERLAGPDNGLSKTRIFQEVTHQFRVHGIRLK
Ga0306926_116064642	3300031954	Soil	MTEGAALFSVAVGNSVSVRFSFSSMKSGRTHSDEANGCAQELWGELIGIDDRTGQERTFTIYKRTGSLLIVSDTGCERLAGPDHGLSKSRVFQEVMDQFSVHAVRRKPSLYALPD
Ga0318545_102959041	3300032042	Soil	VKPGKNDSVEAGGCAQELWGELIGFDDETDQERTFTIYRRGGSLLIVSDAGHERLAGPDNGLSKADIFREVMDQFQVHAV
Ga0306924_103887991	3300032076	Soil	KPGKNDSVEAGGCAQELWGELIGFDDETDQERTFTIYRRGGSLLIVSDAGHERLAGPDNGLSKADIFREVMDQFQVHAVGRKPSF
Ga0306920_1016402692	3300032261	Soil	MKPEKIDSDDANGCARELWGELTGIDDRTDQERVFTIYKRGGGPLIVSDTGCERLAGPDNGLSKTRIFQEVTHQFRVHGIRLKPLFYDQPD
Ga0315742_104213552	3300032756	Forest Soil	MDSHEANGVDQELWGELIGIDDRTDQERTFTIYKRSGSLLVVSDTGCERLVGPDHGLSKTRIFQEVMYQFRVHAVRPKPSLYPLAD
Ga0315742_118348711	3300032756	Forest Soil	MKPGRIDSHDAKGGAQELWRELIGIDDRTDQERTFTIYKRSGSLLVVSDTGCERLVGPDHGLSKTHIFQEVMNQFGVHAVRPKPSLYPLPD

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079016

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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