Metagenome / Metatranscriptome Family F079029

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079029
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	90 residues
Representative Sequence	GLALPGPGRPFDPDRDVARLRAEGVRYVLVTGAVADRVLAARDRYPREVRFYDQLRMQGKRVYHVRAGHGLTGPWVSVYRL
Number of Associated Samples	99
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.14 %
% of genes from short scaffolds (< 2000 bps)	96.55 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.690 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (14.655 % of family members)
Environment Ontology (ENVO)	Unclassified (36.207 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (43.103 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.69% β-sheet: 18.35% Coil/Unstructured: 55.96%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
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SCOP family	SCOP domain	Representative PDB	TM-score
c.71.1.1: Dihydrofolate reductase-like	d1juva_	1juv	0.55
c.66.1.53: S-adenosyl-L-methionine-dependent methyltransferases	d1yzha1	1yzh	0.54
c.66.1.0: S-adenosyl-L-methionine-dependent methyltransferases	d4pcaa1	4pca	0.54
a.102.2.1: Seven-hairpin glycosidases	d2ri9a_	2ri9	0.53
a.118.1.29: ARM repeat	d3jb9x2	3jb9	0.53

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF00583	Acetyltransf_1	3.45
PF02617	ClpS	2.59
PF13673	Acetyltransf_10	1.72
PF02274	ADI	1.72
PF13508	Acetyltransf_7	0.86
PF08282	Hydrolase_3	0.86
PF02653	BPD_transp_2	0.86
PF01872	RibD_C	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG2127	ATP-dependent Clp protease adapter protein ClpS	Posttranslational modification, protein turnover, chaperones [O]	2.59
COG1834	N-Dimethylarginine dimethylaminohydrolase	Amino acid transport and metabolism [E]	1.72
COG2235	Arginine deiminase	Amino acid transport and metabolism [E]	1.72
COG4874	Uncharacterized conserved protein	Function unknown [S]	1.72
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.86
COG0560	Phosphoserine phosphatase	Amino acid transport and metabolism [E]	0.86
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	0.86
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	0.86
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.86
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	0.86
COG3769	Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamily	Carbohydrate transport and metabolism [G]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.69 %
Unclassified	root	N/A	4.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.69 %
Unclassified	root	N/A	4.31 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.69 %
Unclassified	root	N/A	4.31 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	93.97 %
Unclassified	root	N/A	4.31 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	93.97 %
Unclassified	root	N/A	4.31 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	61.21 %
Unclassified	root	N/A	4.31 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	60.34 %
Unclassified	root	N/A	4.31 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.86 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	60.34 %
Unclassified	root	N/A	4.31 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig968034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	506	Open in IMG/M
2170459006\|GBPF9FW01CK7BC	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	505	Open in IMG/M
2170459019\|G14TP7Y02I0SGC	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300000955\|JGI1027J12803_107125184	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300000956\|JGI10216J12902_107428277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	711	Open in IMG/M
3300004114\|Ga0062593_100911707	Not Available	890	Open in IMG/M
3300004156\|Ga0062589_102501581	Not Available	534	Open in IMG/M
3300004157\|Ga0062590_102135450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	585	Open in IMG/M
3300004157\|Ga0062590_102630927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	535	Open in IMG/M
3300004463\|Ga0063356_104732080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	585	Open in IMG/M
3300004479\|Ga0062595_101677217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	597	Open in IMG/M
3300005329\|Ga0070683_102277037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300005339\|Ga0070660_100311537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1292	Open in IMG/M
3300005347\|Ga0070668_101832698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	558	Open in IMG/M
3300005441\|Ga0070700_101218280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	629	Open in IMG/M
3300005456\|Ga0070678_102281637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	514	Open in IMG/M
3300005468\|Ga0070707_101607844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	617	Open in IMG/M
3300005471\|Ga0070698_100146890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2307	Open in IMG/M
3300005471\|Ga0070698_101506305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	624	Open in IMG/M
3300005526\|Ga0073909_10427424	Not Available	629	Open in IMG/M
3300005526\|Ga0073909_10580455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	551	Open in IMG/M
3300005529\|Ga0070741_11439940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	571	Open in IMG/M
3300005538\|Ga0070731_10400574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	912	Open in IMG/M
3300005552\|Ga0066701_10331033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	944	Open in IMG/M
3300005615\|Ga0070702_100291308	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300005617\|Ga0068859_101556135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	730	Open in IMG/M
3300006034\|Ga0066656_11057899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	521	Open in IMG/M
3300006175\|Ga0070712_100485342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1034	Open in IMG/M
3300006578\|Ga0074059_11505382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	569	Open in IMG/M
3300006794\|Ga0066658_10874403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300006806\|Ga0079220_10811776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	710	Open in IMG/M
3300006852\|Ga0075433_10121119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2323	Open in IMG/M
3300006881\|Ga0068865_101571943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	591	Open in IMG/M
3300006914\|Ga0075436_101437135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	523	Open in IMG/M
3300009038\|Ga0099829_11536191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	549	Open in IMG/M
3300009089\|Ga0099828_11856957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529	Open in IMG/M
3300009090\|Ga0099827_10855668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	787	Open in IMG/M
3300009094\|Ga0111539_10830565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1075	Open in IMG/M
3300009137\|Ga0066709_103037298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	615	Open in IMG/M
3300009137\|Ga0066709_104174811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	526	Open in IMG/M
3300009148\|Ga0105243_10752038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	956	Open in IMG/M
3300009148\|Ga0105243_10833237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	912	Open in IMG/M
3300009148\|Ga0105243_13077920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300009162\|Ga0075423_10862524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	959	Open in IMG/M
3300009176\|Ga0105242_10813144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	926	Open in IMG/M
3300009177\|Ga0105248_11740721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	707	Open in IMG/M
3300009177\|Ga0105248_12636909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	573	Open in IMG/M
3300009840\|Ga0126313_10120585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1951	Open in IMG/M
3300010040\|Ga0126308_10885362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	622	Open in IMG/M
3300010046\|Ga0126384_12402573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300010371\|Ga0134125_10609041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1207	Open in IMG/M
3300010375\|Ga0105239_10890618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1021	Open in IMG/M
3300010375\|Ga0105239_11301740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	838	Open in IMG/M
3300010397\|Ga0134124_12315890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	578	Open in IMG/M
3300010399\|Ga0134127_12373377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	610	Open in IMG/M
3300010401\|Ga0134121_10552106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1070	Open in IMG/M
3300010403\|Ga0134123_12150209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	619	Open in IMG/M
3300012096\|Ga0137389_10522567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1019	Open in IMG/M
3300012211\|Ga0137377_11547419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300012353\|Ga0137367_10007740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8625	Open in IMG/M
3300012353\|Ga0137367_10422100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	944	Open in IMG/M
3300012356\|Ga0137371_10630987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	822	Open in IMG/M
3300012356\|Ga0137371_11119454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	591	Open in IMG/M
3300012684\|Ga0136614_10187047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1563	Open in IMG/M
3300012911\|Ga0157301_10381475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	540	Open in IMG/M
3300012988\|Ga0164306_11280703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	618	Open in IMG/M
3300012988\|Ga0164306_11492606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	579	Open in IMG/M
3300012989\|Ga0164305_10246036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1289	Open in IMG/M
3300012989\|Ga0164305_10541637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	924	Open in IMG/M
3300013296\|Ga0157374_10888836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	908	Open in IMG/M
3300013765\|Ga0120172_1014030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2481	Open in IMG/M
3300014326\|Ga0157380_13198425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300014745\|Ga0157377_10112025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1641	Open in IMG/M
3300014969\|Ga0157376_10243777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1675	Open in IMG/M
3300014969\|Ga0157376_10513085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1180	Open in IMG/M
3300017974\|Ga0187777_10688198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	725	Open in IMG/M
3300018064\|Ga0187773_10931714	Not Available	564	Open in IMG/M
3300024331\|Ga0247668_1132255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	508	Open in IMG/M
3300025313\|Ga0209431_10922272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	624	Open in IMG/M
3300025899\|Ga0207642_10504243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	741	Open in IMG/M
3300025922\|Ga0207646_10985091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	745	Open in IMG/M
3300025922\|Ga0207646_11072510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	710	Open in IMG/M
3300025932\|Ga0207690_10456696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1028	Open in IMG/M
3300025942\|Ga0207689_10439658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1089	Open in IMG/M
3300025944\|Ga0207661_10743987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	902	Open in IMG/M
3300025972\|Ga0207668_11062365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	725	Open in IMG/M
3300025981\|Ga0207640_11674822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	574	Open in IMG/M
3300026067\|Ga0207678_10761854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	854	Open in IMG/M
3300026142\|Ga0207698_11570034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	673	Open in IMG/M
3300026325\|Ga0209152_10224227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	703	Open in IMG/M
3300027882\|Ga0209590_10500276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	785	Open in IMG/M
3300027965\|Ga0209062_1164460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	846	Open in IMG/M
3300028812\|Ga0247825_10769935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	694	Open in IMG/M
3300028814\|Ga0307302_10319782	Not Available	764	Open in IMG/M
3300028828\|Ga0307312_10327015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1001	Open in IMG/M
3300031473\|Ga0272434_1320974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	638	Open in IMG/M
3300031546\|Ga0318538_10670338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	563	Open in IMG/M
3300031640\|Ga0318555_10536420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	634	Open in IMG/M
3300031640\|Ga0318555_10567759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	615	Open in IMG/M
3300031668\|Ga0318542_10197807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1013	Open in IMG/M
3300031681\|Ga0318572_10716782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	595	Open in IMG/M
3300031747\|Ga0318502_10123446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1457	Open in IMG/M
3300031748\|Ga0318492_10226253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	963	Open in IMG/M
3300031748\|Ga0318492_10600701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	587	Open in IMG/M
3300031765\|Ga0318554_10632506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	602	Open in IMG/M
3300031768\|Ga0318509_10380608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	789	Open in IMG/M
3300031778\|Ga0318498_10454938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	566	Open in IMG/M
3300031792\|Ga0318529_10235227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	852	Open in IMG/M
3300031793\|Ga0318548_10392485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	680	Open in IMG/M
3300031819\|Ga0318568_10287912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1020	Open in IMG/M
3300031965\|Ga0326597_11974277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	541	Open in IMG/M
3300032054\|Ga0318570_10216391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	867	Open in IMG/M
3300032059\|Ga0318533_11288266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	534	Open in IMG/M
3300032828\|Ga0335080_10308892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1715	Open in IMG/M
3300032828\|Ga0335080_11660651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300033758\|Ga0314868_018679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	737	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.28%
Host-Associated	Host-Associated	25.86%
Engineered	Engineered	0.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.41%
Plants	Host-Associated → Plants	25.86%
Aquatic	Environmental → Aquatic	0.86%
Solid Waste	Engineered → Solid Waste	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.90%
Freshwater	Environmental → Aquatic → Freshwater	0.86%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	0.86%
Grass	Engineered → Solid Waste → Grass	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.66%
Loam	Environmental → Terrestrial → Soil → Loam	9.48%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.03%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.31%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.31%
Ice	Environmental → Aquatic → Freshwater → Ice	0.86%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	0.86%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.86%
Composting	Engineered → Solid Waste → Grass → Composting	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.66%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.03%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.17%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.31%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.86%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.86%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.86%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.86%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.86%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.66%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.03%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.31%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.31%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.59%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.72%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.72%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.72%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.86%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.86%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.86%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.86%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.86%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.86%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2170459006	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 0-10cm	Environmental	Open in IMG/M
2170459019	Litter degradation MG4	Engineered	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013765	Permafrost microbial communities from Nunavut, Canada - A30_80cm_6M	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027965	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031473	Rock endolithic microbial communities from Victoria Land, Antarctica - Trio Nunatak nord	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033758	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SR_A	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_00794500	2124908045	Soil	IVRHLPARASVAADSSTPPIGRHVLDLQLPGPGRPYDPNRDVARLRRNGVDYVLVTGAVADRVLAARNHYPREARFYDQLRMQGKRVYHVEPGHGLTGPWVSVYRL
L01_01805250	2170459006	Grass Soil	IGRRVLDLQLPGPGRPHDPNRNLARLRSKGVDYVLVTGAVADRVLAARDHYPQEARFYDDLRTRAKQVYHVQSGHGLTGPWVSLYRL
4MG_00490380	2170459019	Switchgrass, Maize And Mischanthus Litter	IEQHLPPGSRVAADSSTAPLAGVDVLPLALPGPGRPFDPNRSVARLRREGIRYALVTGAIADRVLAARDRYPREARFYDQLRTREKRLYYVSAGHGLSGPWVALYQI
JGI1027J12803_1071251842	3300000955	Soil	PDRNVDRLRAEGARYALVTGAIADRVLAARDRYPREARFYDQLRTRAKRVYHVEPGHGLSGPWVSLYRL*
JGI10216J12902_1074282772	3300000956	Soil	LELPGPGREADENRDVAFLREAGLDYVFVTGAVADRVLAARDRYPRDASFYDDLRANARRVLYVEEGDGLAGPWVALYRL*
Ga0062593_1009117071	3300004114	Soil	PNRSVARLRREGVRYALVTGAIADRVLAARDHYPREARFYDQLRTREKRLYYVSAGHGLSGPWVALYQI*
Ga0062589_1025015812	3300004156	Soil	LPGPKRPFDPDRNVARLRREGVQYVLVTGAIADRVLAAREKYPREAAFYGQLRARAKRVYHVEPGHGLTGPWVSLYRL*
Ga0062590_1021354502	3300004157	Soil	LPAQASVAADSSTPPIGRRVLDLQLPGPGRPHDPNRNLARLRSKGVDYVLVTGAVADRVLAARDHYPQEARFYDDLRTRAKQVYHVQSGHGLTGPWVSLYRL*
Ga0062590_1026309271	3300004157	Soil	PRLDGYRIVELALPGPGRPFDGDRNVARLRAEGVGYAVITGAVADRVLAARERYPREARFYDQLSRTNRVYHVRAGHGLTGPWVSVYRL*
Ga0063356_1047320801	3300004463	Arabidopsis Thaliana Rhizosphere	LQLPGPGRPYDPNRDITRLRREGVDYVLVTGAVADRVVAARSRYPREARFYDQLRTRARAVYHLDPAHGLTGPWVTLYRL*
Ga0062595_1016772172	3300004479	Soil	RKILPLLLPGPGRPFDPNRDVARLEREGIEYVLVTGAVADRVRAAAKHYPREVRFYDQLQRQAKRLYYVKPANGLAGPWVAVYRL*
Ga0070683_1022770372	3300005329	Corn Rhizosphere	GLALPGPGRPFDPDRDVPRLRAEGVSYVLVTGAIADRVLAARDRYPREARFYDQLRRTRRVYHVQAGHGLTGPWVSVYRL*
Ga0070660_1003115373	3300005339	Corn Rhizosphere	GWIVRHVPRDAVVAAESSTPALDGYRIVGLTLPGPGRPFDPDRDVARLRADGVRYVFVTGAVADRVLAARDRYPREARFYDKLRMQGKRVYHVRAGHGLTGPWVSVYRL*
Ga0070668_1018326982	3300005347	Switchgrass Rhizosphere	LPGPGRPFDPDRDVARLRAEGVRYVLVTGAVADRVLAARDRYPREVRFYDQLRMQGKRVYHVRAGHGLTGPWVSVYRL*
Ga0070700_1012182802	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	TRTDTRVVAQRWVFDHLPPRASVAADSSTPPIGRRVLDLQLPGPGRRHDPNRNLARLRSKGVNYVLVTGAVADRVLAARDHYPQEARFYDDLRNKANRVYHVEAGHGLTGPWVSLYRL*
Ga0070678_1022816371	3300005456	Miscanthus Rhizosphere	IGRRVLDLQLPGPGRPHDPNRNLARLRSKGVDYVLVTGAVADRVLAARDHYPQEARFYDDLRTGANRVYHVQSGHGLTGPWVSLYRL*
Ga0070707_1016078442	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	WIDSHLPAGATVAAESSTPALDGHPIVGLALPGPGRPFDPDRDVPRLRAEGVSYVLVTGAIADRVLAARDRYPREARFYDQLRRTRRVYHVQAGHGLTGPWVSVYRL*
Ga0070698_1001468901	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	LLLPGPGRAFDPNRNVARLRARGVGYAVVTGAIADRVLAARDRYPRETRFYLDLRRSARRLYYVAPGHGLAGPWVAVYRL*
Ga0070698_1015063052	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	TPPLAGYRIVGLALPGPGRPFDPDRDVSRLRAEGVGYVFVTGAVADRVLAARDRYPREARFYDDVRLQAKRVYHVQPGHGLAGPWVSVYRL*
Ga0073909_104274241	3300005526	Surface Soil	PHDPNRNLARLRSKGVGYVLVTGAIADRVLAARDHYPQEASFYDDLRTRAKRVYHVQSGHGLTGPWVSLYRL*
Ga0073909_105804551	3300005526	Surface Soil	WIEQHVPAGSRVAAESSTPGLPGLRVFHLALPGPGRPSDPNRDVARLRRQGVRYALVTGAIADRVLAARERYPLEARFYRQLRGQPRAFYLAPGNRYSGPWVALYRLYP*
Ga0070741_114399402	3300005529	Surface Soil	IAAESSTPPLEGHPIVALALPGPGRPFDPDRDVARLRAEGVRYALVTGAIADRVLAARDRYPREARFYARLRMEAKRVYHVDPGRGLSGPWVSLYRL*
Ga0070731_104005741	3300005538	Surface Soil	ADSSTPPLAGHPELALQLPGPGRPHDPNRNVARLRTEGVRYVLVTGAVADRVLAASGDYPLETRFYDDLRASAKRLYYVQAGHGLTGPWVALYRL*
Ga0066701_103310331	3300005552	Soil	DSTVAEELSLPALPGYPTLPLLLPGPGRAFDPNRDVAHLRARGVAYAVVTGAIADRVLAARDRYPRETRFYLDLRRSARRLYYVAPGHGLAGPWVAVYRL*
Ga0070702_1002913081	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	LALPGPGRPFDPDRDIARLRAQGVHYALVTGAIADRVLAARGSYPKEAHFYDELRTRAKRVYHVEAGHGLTGPWVSLYRL*
Ga0068859_1015561352	3300005617	Switchgrass Rhizosphere	VAAESSTPALDGYRIVGLTLPGPGRPFDPDRDVARLRADGVRYVFVTGAVADRVLAARDRYPREARFYDKLRMQGKRVYHVRAGHGLTGPWVSVYRL*
Ga0066656_110578992	3300006034	Soil	IAADSSTAPLEGFDVLPLALPGPGRIFDPNRNVARLRADGIRYALVTGAIADRVLAARDRYPREARFYDQLRTRAKRLYYLRKSRGLTGPWVAVYRL*
Ga0070712_1004853423	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	AGLAAESSTPLLKRKILPLLLPGPGRPSDPNRDLARLKREGIEYVLVTGAVADRVRAAAKHYPREVGFYDQLQRQAKRLYYVKPANGLAGPWVAVYRL*
Ga0074059_115053821	3300006578	Soil	LVDHLPAQASVAADSSTPPIGRRVLDLQLPGPGRPHDPNRNLARLRNKGVDYVLVTGAVEDRVLAARDHYPQEARFYDDLRTRAKQVYHVQSGHGLTGPWVSLYRL*
Ga0066658_108744031	3300006794	Soil	GPKRPFDPDRNVARLRREGVRYVLVTGAIADRVLAAREKYPREAAFYGQLRARAKRVYHVEPGHGLTGPWVSLYRL*
Ga0079220_108117762	3300006806	Agricultural Soil	VAVDPSTPALPLGYPIVSLALPGPGRPFDPNRSVRRLRAKGVAYAIVTGAVADRVLAARDRYPREARFYDDLRRTARRIYYRSAGHGLTGPWIAVYRLSSS*
Ga0075433_101211191	3300006852	Populus Rhizosphere	IAADSSTAPLAGFDVVPLALPGPGRPFDPNRSVARLRREGIRYALVTGAIEDRVLAARDHYPREARFYDQLRAREKRLYYVSAGHGLSGPWVALYRI*
Ga0068865_1015719432	3300006881	Miscanthus Rhizosphere	LDGYRIVGLTLPGPGRPFDPDRDVARLRADGVRYVFVTGAVADRVLAARDRYPREARFYDKLRMQGKRVYHVRAGHGLTGPWVSVYRL*
Ga0075436_1014371352	3300006914	Populus Rhizosphere	GHLPPQASVAADSSTPPIGRRVLDLQLPGPGRPHDPNRDVARLRHQGVDYVFVTGAVADRVLAAREDYPFEARFYENLRKLKRVFYVPEDARDLNGPWVAVYKL*
Ga0099829_115361912	3300009038	Vadose Zone Soil	AAESSTPLLPGHAVLPLLLPGPGRPSDPNRDVARLRREGIRYVLVTGAVADRVLAARSHYPREVRFYRQLQRQTIRLYYVTSAHGLAGPWVAVYRL*
Ga0099828_118569572	3300009089	Vadose Zone Soil	RPSDPNRDVARLRREGIRYVLVTGAVADRVLAARSHYPREVRFYRELQQQAIRLYYVKPAHGLAGPWVAVYRL*
Ga0099827_108556682	3300009090	Vadose Zone Soil	AQRWIVAHVPQDSAVAEESSLPALPGYPTLPLLLPGPGRAFDPNRDVARLRARGVAYAVVTGAIADRVLAARDRYPRETRFYLDLRRSARRLYYVAPGRGLAGPWVAVYRL*
Ga0111539_108305653	3300009094	Populus Rhizosphere	FDPNRNVARLRREGIRYALVTGAIEDRVLAARDHYPREARFYDQLRAREKRLYYVSAGHGLSGPWVALYRI*
Ga0066709_1030372981	3300009137	Grasslands Soil	PIGRHVLDLQLPGPGRPHDPNRDVARLRREGIDYVLVTGAVADRVLAARDRYPREARFYDQLRTQARRLYYLRPGHGLTGPWVSLYRL*
Ga0066709_1041748111	3300009137	Grasslands Soil	STPALPPGYSIVGLALPGPGQPFDPDRNVGRLRREGVAYVVVTGAVADRVLAARERYPREARFYTDLRRTAKRIYYASAGHGLTGPWVAVYKL*
Ga0105243_107520382	3300009148	Miscanthus Rhizosphere	LDGYRVVGLALPGPGRPFDPDRDVARLRAEGVRYVLVTGAVADRVLAARDRYPHEVRFYDQLRMQGKRVYHIRAGHGLTGPWVYVYRL*
Ga0105243_108332372	3300009148	Miscanthus Rhizosphere	VGLALPGPKRPFDPDRNVARLRREGVRYVLVTGAIADRVLAAREKYPREAAFYGQLRTRAKRVYHVEPGHGLTGPWVSLYRL*
Ga0105243_130779201	3300009148	Miscanthus Rhizosphere	IGRRVLDLQLPGPGRPYDPNRSVARLRSRGVAYVLVTGAVADRVLAARDRYPQEARFYDDLRNRATRVYHVQSGHGLTGPWVSLYRL*
Ga0075423_108625243	3300009162	Populus Rhizosphere	VGHLPPQASVAADSSTPPIGRRVLDLQLPGPGRPRDPNRDMARLRHKGVDYVFVTGAVADRVLAARDRYPREARFYDQLRSQARRIYRLDPGHGLTGPWVSVYRL*
Ga0105242_108131441	3300009176	Miscanthus Rhizosphere	PIVGLALPGPGRPFDPDRDIARLRAQGVHYALVTGAIADRVLAARDSYPKEAHFYDELRTRARRVYHVEAGHGLTGPWVSLYRL*
Ga0105248_117407212	3300009177	Switchgrass Rhizosphere	IDSHLPAGATVAAESSTPALEGHPIVGLALPGPGRPFDPDRDVSRLRAEGVSFVLVTGAIADRVLAARDRYPREARFYDQLRRTRRVYHVQAGHGLTGPWVSVYRL*
Ga0105248_126369092	3300009177	Switchgrass Rhizosphere	RIVGLALPGPGRPFDPDRDVARLRAEGVRYVFVTGAVADRVLAARDRYPREARFYDRLRMQEKRVYNVRAGHGLTGPWVSVYRL*
Ga0126313_101205854	3300009840	Serpentine Soil	GFDPLRNVRRLRSDGVRYVLVTGVVADRVLAAREQYPREARFYDDLATEAHRAYYVRSGHGLSGPWVAVYRL*
Ga0126308_108853622	3300010040	Serpentine Soil	AESSTPALDGFRVVPLHVPGPGFGFDPLRNVRRLRSDGVRYVLVTGVVADRVLAAREQYPREARFYDDLATEAHRAYYVRSGHGLSGPWVAVYRL*
Ga0126384_124025732	3300010046	Tropical Forest Soil	GLALPGPGRSFDPDRDVSRLRAEGVSYVLVTGAIADRVLAARGRYPREARFYDQLKRTSRVYHVQAGHGLTGPWVSVYRL*
Ga0134125_106090411	3300010371	Terrestrial Soil	LALPGPGRPYDPDRDVARLRSEGVRYALVTGAVADRVLAARDRYPREARFYDQLRVQGKRVYHVQAGHGLTGPWVSVYRL*
Ga0105239_108906181	3300010375	Corn Rhizosphere	HGWIVRHVPRDAVVAADSSTPALDGYRIVGLALPGPGRPFDPDRDVARLRAEGVRYVFVTGAVADRVLAARDRYPREARFYDRLRMQEKRVYHVRAGHGLTGPWVSVYRL*
Ga0105239_113017401	3300010375	Corn Rhizosphere	IGRRVLDLQLPGPGRSHDPNRSVARLRSRGVAYVLVTGAVADRVLAARDRYPQEARFYDDLRNRATRVYHVQSGHGLTGPWVSLYRL*
Ga0134124_123158902	3300010397	Terrestrial Soil	IVGLALPGPGRPFDPDRDVPRLRAEGVSYVLVTGAIADRVLAARDRYPREARFYDQLRRTRRVYHVQAGHGLTGPWVSVYRL*
Ga0134127_123733771	3300010399	Terrestrial Soil	VGLTLPGPGRPFDPDRDVARLRADGVRYVFVTGAVADRVLAARDRYPREARFYDRLRMQEKRVYHVRAGHGLTGPWVSVYRL*
Ga0134121_105521061	3300010401	Terrestrial Soil	DRDVARLRADGVRYVFVTGAVADRVLAARDRYPREARFYDKLRMQGKRVYHVQAGHGLTGPWVSVYRL*
Ga0134123_121502092	3300010403	Terrestrial Soil	VAAESSTPALDGYRVVGLALPGPGRPFDPDRDVARLRAEGVRYVLVTGAVADRVLAARDRYPREVRFYDQLRMQGKRVYHVRAGHGLTGPWVSVYRL*
Ga0137389_105225671	3300012096	Vadose Zone Soil	WIVAHVPEDSTVAEESSLPALPGYPTLPLLLPGPGRAFDPNRNVARLRARGVAYAVVTGAIADRVLAASDRYPRETRFYLDLRRSARRLYYVAPGHGLAGPWVAVYRL*
Ga0137377_115474191	3300012211	Vadose Zone Soil	AESSTPPLDGYPIVGLALPGPGRPFDPDRDVARLRAEGVDYALVTGAIADRVLAARDRYPREARFYDALRTQAKRVYHVEPGHGLAGPWVSVYRL*
Ga0137367_1000774011	3300012353	Vadose Zone Soil	RAWIEEHVPRGAKVAVESSTPPLQGFDVLPLQLPGPGRRFDPNRDVHNLQGEGVRYVLVTGVVANRVLAARSSYPKEARFYDDLARETHREYYVQAGGDLAGPWVAVYRL*
Ga0137367_104221001	3300012353	Vadose Zone Soil	RVLPLELPGPGRETDPNRSVARLEQRGVRYVLVTGAVADRVLSAPRRYPAEARFYAQLRSRATLEYYRGPGKGLEGPWIALFRLYS*
Ga0137371_106309872	3300012356	Vadose Zone Soil	AADSSTPPLTGYPVLPLQLPGPGRTTDPNRNVARLRARGVAYVIVTGAVADRVLAARERYPREVRFYEELRARARRLYYVQKGHGLTGPWLAVYRL*
Ga0137371_111194542	3300012356	Vadose Zone Soil	PRGATVATDSSTPSFAGYRIVGLALPGPGRPFDPDRSVSRLRAEGVGYVFVTGAIVDRVLAARDRYPREARFYGALQVQAKRVYHVQPGHGLAGPWVSVYRL*
Ga0136614_101870471	3300012684	Polar Desert Sand	PSTPPLPELRTVRLELPGPGREPDPRRDVERLRAEGVRYVLVTGAVADRVLAARSRYPRESRFYDQLRRAPRALYVEPGDALAGPWVALYTLAP*
Ga0157301_103814751	3300012911	Soil	ATVAAESSTPLLEGHPIVGLALPGPGRPFDPDRDIARLRAQGVHYALVTGAIADRVLAARDSYPKEAHFYDELRTRAKRVYHVEAGHGLTGPWVSLYRL*
Ga0164306_112807031	3300012988	Soil	LQLPGPGRPSDPNRDVGTLRRDGVRLVVVTGAVADRVLAARDRYPREARFYDDLRARTKRIYYVAPGDGRAGPWVAIYRL*
Ga0164306_114926061	3300012988	Soil	LKRKILPLLLPGPGRPFDPNRDVARLEREGIEYVLVTGAVADRVRAAAKHYPREVRFYDQLQRQAKRLYYVKPANGLAGPWVAVYRL*
Ga0164305_102460361	3300012989	Soil	PLQLPGPGRPSDPNRDVGTLRRDGVRLVVVTGAVADRVLAARDRYPREARFYDDLRARTKRIYYVAPGDGRAGPWVAIYRL*
Ga0164305_105416372	3300012989	Soil	LLKRKILPLLLPGPGRPSDPNRDLARLKREGIEYVLVTGAVADRVRAAAKHYPREVRFYDQLQRQAKRLYYVKPANGLAGPWVAVYRL*
Ga0157374_108888362	3300013296	Miscanthus Rhizosphere	DRDVARLRADGVRYVFVTGAVADRVLAARDRYPREARFYDKLRMQGKRVYHVRAGHGLTGPWVSVYRL*
Ga0120172_10140304	3300013765	Permafrost	GRPFDPDRDVARLRAEGVHYALVTGAIADRVLAARDRYPREARFYDALRTQAKRVYHVEPGHGLAGPWVSVYRL*
Ga0157380_131984251	3300014326	Switchgrass Rhizosphere	DGYRIVGLTLPGPGRPFDPDRDVARLRADGVRYVFVTGAVADRVLAARDRYPREARFYDKLRMQGKRVYHVQAGHGLTGPWVSVYRL*
Ga0157377_101120251	3300014745	Miscanthus Rhizosphere	PRDAAVAAESSTPELDGYRIVGLALPGPGRPFDPDRDVGRLRAEGVRYVLVTGAVADRVLAARDRYPREARFYDQLRMQGKRVYHVRAGHGLTGPWVSVYRL*
Ga0157376_102437773	3300014969	Miscanthus Rhizosphere	AWIVEHVPPHATVAAESSAPPLEGHPIVGLALPGPGRPFDPDRDIARLRAQGVHYALVTGTIADRVLAARDRYPKEAHFYDQLRTRAKRVYHVGPGDGLTGPWVSLYRL*
Ga0157376_105130853	3300014969	Miscanthus Rhizosphere	PRDAVVAADSSTPALDGYRIVGLALPGPGRPFDPDRDVARLRAEGVRYVFVTGAVADRVLAARDRYPREARFYDRLRMQEKRVYHVRAGHGLTGPWVSVYRL*
Ga0187777_106881981	3300017974	Tropical Peatland	AADSSTPPIGRRVLDLQLPGPGRPYDPNRDIATLRRDGIGYVLVTGAVADRVLAARSRYPREARFYDQLRTRARTVYHVEPTHGLTGPWVTLYRL
Ga0187773_109317142	3300018064	Tropical Peatland	PGPGRPSDPNRDVSRLRREGIRYVLVTGAVADRVMAAQKSYPREVRFYRQLQREARRLYYVRPVHGLAGPWVAVYRL
Ga0247668_11322551	3300024331	Soil	VLDLQLPGPGRPHDPNRNLARLRSKGVDYVLVTGAVADRVLAARDHYPQEARFYDDLRTRAKRVYHVQSGHGLTGPWVSLYRL
Ga0209431_109222722	3300025313	Soil	LALPGPAFSFDPDRDVARLRRLGVGYVLVTGAVADRVLAARERYPREARFYDQLRAGAERVYHGERGAGLNGPSVSLYRL
Ga0207642_105042431	3300025899	Miscanthus Rhizosphere	PHATVAAESSTPPLEGHPIVGLALPGPGRPFDPDRDIARLRAQGVHYALVTGAIADRVLAARDSYPKEAHFYDELRTRAKRVYHVEAGHGLTGPWVSLYRL
Ga0207646_109850911	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	HLPAGATVAAESSTPALDGHPIVGLALPGPGRPFDPDRYVPRLRAEGVSYVLVTGAIADRVLAARDRYPREARFYDQLRRTRRVYHVQAGHGLTGPWVSVYRL
Ga0207646_110725102	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	PGRAFDPNRNVARLRARGVGYAVVTGAIADRVLAARDRYPRETRFYLDLRRSARRLYYVAPGHGLAGPWVAVYRL
Ga0207690_104566961	3300025932	Corn Rhizosphere	GLALPGPGRPFDPDRDVARLRAEGVRYVLVTGAVADRVLAARDRYPREVRFYDQLRMQGKRVYHVRAGHGLTGPWVSVYRL
Ga0207689_104396581	3300025942	Miscanthus Rhizosphere	TPALDGYRIVGLALPGPGRPFDPDRDVGRLRTEGVRYVLVTGAVADRVLAARDRYPREVRFYDQLRMQGKRVYHVRAGHGLTGPWVSVYRL
Ga0207661_107439872	3300025944	Corn Rhizosphere	TPELDGYRIVALALPGPGRPFDPDRDVGRLRAEGVRYVLVTGAVADRVLAARDRYPREARFYDQLRMQGKRVYHVRAGHGLTGPWVSVYRL
Ga0207668_110623652	3300025972	Switchgrass Rhizosphere	EGHPIVGLALPGPGRPFDPDRDIARLRAQGVHYALVTGAIADRVLAARDSYPKEAHFYDELRTRAKRVYHVEAGHGLTGPWVSLYRL
Ga0207640_116748221	3300025981	Corn Rhizosphere	WIVRHVPRDAVVAAESSTPALDGYRIVGLTLPGPGRPFDPDRDVARLRADGVRYVFVTGAVADRVLAARDRYPREARFYDKLRMQGKRVYHVQAGHGLTGPWVSVYRL
Ga0207678_107618542	3300026067	Corn Rhizosphere	GPGRPFDPDRDVGRLRAEGVRYVLVTGAVADRVLAARDRYPREARFYDQLRMQGKRVYHVRAGHGLTGPWVSVYRL
Ga0207698_115700342	3300026142	Corn Rhizosphere	GFDATPLALPGPGRAPDPNRSFARARGEYVLVTGAVADRVLAARDRYPHEVRFYDQLRMQGKRVYHVRAGHGLTGPWVSVYRL
Ga0209152_102242271	3300026325	Soil	PLVGLALPGPGRPFDPDRNVRRLRRQGVAYVVVTGAIADRVLAARERYPREARFYADLRKSAKRVYYGKAGHGLTGPWIAVYRL
Ga0209590_105002761	3300027882	Vadose Zone Soil	GRAFDPNRDVARLRARGVAYAVVTGAIADRVLAARDRYPRETRFYLDLRRSARRLYYVAPGRGLAGPWVAVYRL
Ga0209062_11644601	3300027965	Surface Soil	AAESSTPPLPSARVVPLQLPGPGRPFDRNRDVARLRAEGVRYVLVTGAVADRVLAARSSYPREARFYDELRRDATVVYELRPGGSLGGPWVALYRL
Ga0247825_107699351	3300028812	Soil	AESSTPALDGYRIVGLALPGPGRPFDPDRDVGRLRTEGVHYVLVTGAVADRVLAARDRYPREVRFYDQLRMQGKRVYHVRAGHGLTGPWVSVYRL
Ga0307302_103197821	3300028814	Soil	RDVARLRAEGVRYALVTGVVADRVLAARDRYPREARFYDALRAQAKRVYHVQPGHGLAGPWVSVYRL
Ga0307312_103270153	3300028828	Soil	EGYRIVGLALPGPGRPFDPDRDVARLRAEGVRYALVTGAVADRVLAARDRYPRESRFYDALRTQAKRVYHVEPGHGLAGPWVSVYRL
Ga0272434_13209742	3300031473	Rock	VDPSTPVLEGMRVTALRLPGPGRPSDGRRDVSRLRALGVRYVLVTGAVTDRVLAARERYPAEARFYDALRRDHRQVYSLTPGDGLAGPWVAVYRL
Ga0318538_106703381	3300031546	Soil	VPGSARIAAESSTPPLAGRTVLPLLLPGPGRPFDPNRDVARLRSEGIQYVLVTGAVADRVLAARSHYPREARFYGQLRRETRRLYYVKAHDGLAGPWVAVYRL
Ga0318555_105364202	3300031640	Soil	KVLPLLLPGPGRPSDPNRDVARLKREGIRYVLVTGAVDDRVLAARKHYPREVRFYAQLQRLANRLYYVRAGHGLGGPWVAVYRL
Ga0318555_105677592	3300031640	Soil	RWILAHVPEDSAIAADSSTAPLVGYPVVPLQLPGPGRPTDPNRDVARLKAKGVAYVLVTGAVEDRVLAARDHYPREARFDDQLRTRAKRIYELRAGGDLTGPWVAVYRL
Ga0318542_101978072	3300031668	Soil	VLPLLLPGPGRPSDPNRDVARLRREGIRYVLVTGAVADRVLAARSHYPREVRFYLQLQRQGTRLYYVKPNHGLAGPWVAVYRL
Ga0318572_107167822	3300031681	Soil	PGRPSDPNRDVARLRREGIRYVLVTGAVADRVLAARSHYPREVRFYLQLQRQGTRLYYVKPNHGLAGPWVAVYRL
Ga0318502_101234461	3300031747	Soil	SSTLPLAGRPVLPLLLPGPGRPSDPNRDVARLRREGIRYVLVTGAVADRVLAARSHYPREVRFYLQLQRQGTRLYYVKPNHGLAGPWVAVYRL
Ga0318492_102262533	3300031748	Soil	SIVAQRWILAHVPEDSAIAADSSTAPLVGYPVVPLQLPGPGRPTDPNRDVARLKAKGVAYVLVTGAVEDRVLAARDHYPREARFDDQLKTRAKRIYELRAGGDLTGPWVAVYRL
Ga0318492_106007011	3300031748	Soil	STIAAESSTPPLPTLKVLPLLLPGPGRPSDPNRDVARLKHEGVRYVLVTGAVADRVLAARTRYPREVRFYAQLQRLANRLYYVRAGHGLGGPWVAVYRL
Ga0318554_106325062	3300031765	Soil	LPESARIAAESSTPPLAGRTVLPLLLPGPGRPSDPNRDVARLRTEGIQYVLVTGAVADRVLAARSHYPREARFYGQLQRETRRLYYVKAHDGLAGPWVAVYRL
Ga0318509_103806082	3300031768	Soil	VLPLLLPGPGRPSDPNRDVARLRTEGIQYVLVTGAVADRVLAARSHYPREARFYGQLQRETRRLYYVKAHDGLAGPWVAVYRL
Ga0318498_104549382	3300031778	Soil	TDSSTPTLVGYPVLPLQLPGPGRPTDPNRDVARLKAKGVAYVLVTGAVEDRVLAARDHYPREARFDDQLKTRAKRIYELRAGGDLTGPWVAVYRL
Ga0318529_102352272	3300031792	Soil	PGPGRPSDPNRDVARLRREGVKYVLVTGAVADRVLAARKHYPREVRFYAQLQRLANRLYYVKSGHGLGGPWVAVYRL
Ga0318548_103924852	3300031793	Soil	LLPGPGRPSDPNRDVARLKHEGVRYVLVTGAVADRVLAARTRYPREVRFYAQLQRLANRLYYVRAGHGLGGPWVAVYRL
Ga0318568_102879122	3300031819	Soil	LKVLPLLLPGPGRPSDPNRDVARLKREGIRYVLVTGAVADRVLAARKHYPREVRFYAQLQRLANRLYYVRAGHGLGGPWVAVYRL
Ga0326597_119742772	3300031965	Soil	SSTPPLDGYRIVGLALPGPGRSFDPDRDLRRLRAEGVQYALVTGAVADRVLAARDHYPREARFYDDLRMQAKRVYHVRPGHGLTGPWVSLYRL
Ga0318570_102163911	3300032054	Soil	PESARIAAESSTPPLAGRTVLPLLLPGPGRPSDPNRDVARLRTEGIQYVLVTGAVADRVLAARSHYPREARFYGQLQRETRRLYYVKAHDGLAGPWVAVYRL
Ga0318533_112882662	3300032059	Soil	PVSAPIAAESSTLPLAGRPVLPLLLPGPGRPSDPNRDVARLRREGIRYVLVTGAVADRVLAARSHYPREVRFYLQLQRQGTRLYYVKPNHGLAGPWVAVYRL
Ga0335080_103088921	3300032828	Soil	RSAPVATESSTAPLDGYHVLALELPGPARPFDIDRNVARLRAKGIRYVVITGAIADRVLAARDRYPREARFYDQLRREKRVYHVQPGNGLTGPWVAVYRL
Ga0335080_116606511	3300032828	Soil	GPGRTPDPNRDVARLRREGVRYVLVTGAIADRVLAAHADYPRETRFYAQLGRQKRVYDLEPGHRYGGPWVRLYRLYP
Ga0314868_018679_1_240	3300033758	Peatland	QLPGPGRPYDPNRDVARLRREGVDYVLVTGAVADRVLAARSRYPREARFYDQLRTQARTVYHLEPGHGLTGPWVTLYRL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079029

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences