Metagenome / Metatranscriptome Family F079100

Basic Information
Family ID	F079100
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	41 residues
Representative Sequence	GTHIKLENVNGRIEIHHAQDGRALSPVKDLSHRDKDDDDDSSI
Number of Associated Samples	97
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.28 %
% of genes from short scaffolds (< 2000 bps)	84.48 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Most Common Taxonomy
Group	Bacteria (94.828 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (13.793 % of family members)
Environment Ontology (ENVO)	Unclassified (30.172 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.172 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 18.31% Coil/Unstructured: 81.69%
Feature Viewer

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Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF08241	Methyltransf_11	58.62
PF13520	AA_permease_2	4.31
PF00202	Aminotran_3	2.59
PF14559	TPR_19	1.72
PF09364	XFP_N	0.86
PF02861	Clp_N	0.86
PF03738	GSP_synth	0.86
PF00441	Acyl-CoA_dh_1	0.86
PF07238	PilZ	0.86
PF05139	Erythro_esteras	0.86
PF13751	DDE_Tnp_1_6	0.86
PF03065	Glyco_hydro_57	0.86
PF13450	NAD_binding_8	0.86
PF10417	1-cysPrx_C	0.86
PF00561	Abhydrolase_1	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	0.86
COG0754	Glutathionylspermidine synthase, CHAP domain	Amino acid transport and metabolism [E]	0.86
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.86
COG2312	Erythromycin esterase homolog	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.86

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.83 %
Unclassified	root	N/A	5.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.83 %
Unclassified	root	N/A	5.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.83 %
Unclassified	root	N/A	5.17 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	41.38 %
Unclassified	root	N/A	5.17 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.76 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.17 %
Unclassified	root	N/A	5.17 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.17 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.17 %
Unclassified	root	N/A	5.17 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	1.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.17 %
Unclassified	root	N/A	5.17 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	4.31 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	1.72 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.86 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.17 %
Unclassified	root	N/A	5.17 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	4.31 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.72 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918007\|ConsensusfromContig84376	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300001084\|JGI12648J13191_1018213	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300001100\|JGI12703J13194_103709	All Organisms → cellular organisms → Bacteria → Acidobacteria	758	Open in IMG/M
3300001593\|JGI12635J15846_10333024	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300002245\|JGIcombinedJ26739_100389369	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300004082\|Ga0062384_100238088	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300004082\|Ga0062384_100415869	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300005436\|Ga0070713_101499838	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	654	Open in IMG/M
3300005439\|Ga0070711_100347643	All Organisms → cellular organisms → Bacteria → Acidobacteria	1192	Open in IMG/M
3300005541\|Ga0070733_10835562	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300005568\|Ga0066703_10703000	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300005602\|Ga0070762_10695309	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300005607\|Ga0070740_10436496	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300006052\|Ga0075029_100574537	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300006162\|Ga0075030_100510738	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300006162\|Ga0075030_101497964	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	528	Open in IMG/M
3300006173\|Ga0070716_100866999	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	704	Open in IMG/M
3300006176\|Ga0070765_101553771	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300006237\|Ga0097621_100787420	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300006755\|Ga0079222_11129636	All Organisms → cellular organisms → Bacteria → Acidobacteria	692	Open in IMG/M
3300009012\|Ga0066710_104192072	Not Available	539	Open in IMG/M
3300009552\|Ga0116138_1163513	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300009644\|Ga0116121_1166812	All Organisms → cellular organisms → Bacteria → Acidobacteria	697	Open in IMG/M
3300010359\|Ga0126376_12107001	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M
3300010366\|Ga0126379_13800040	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300010376\|Ga0126381_100241024	All Organisms → cellular organisms → Bacteria	2443	Open in IMG/M
3300010379\|Ga0136449_104545806	Not Available	509	Open in IMG/M
3300011120\|Ga0150983_11621500	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300011120\|Ga0150983_13982661	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	602	Open in IMG/M
3300011269\|Ga0137392_10471831	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300011271\|Ga0137393_11718402	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300014657\|Ga0181522_10759738	All Organisms → cellular organisms → Bacteria → Acidobacteria	593	Open in IMG/M
3300014658\|Ga0181519_10177762	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300015374\|Ga0132255_100005810	All Organisms → cellular organisms → Bacteria	13858	Open in IMG/M
3300015374\|Ga0132255_103728611	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300017823\|Ga0187818_10047460	All Organisms → cellular organisms → Bacteria → Acidobacteria	1845	Open in IMG/M
3300017929\|Ga0187849_1003818	All Organisms → cellular organisms → Bacteria	12922	Open in IMG/M
3300017936\|Ga0187821_10103841	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300017955\|Ga0187817_10220628	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300017955\|Ga0187817_10843843	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300017959\|Ga0187779_10939276	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300017975\|Ga0187782_10092095	All Organisms → cellular organisms → Bacteria	2227	Open in IMG/M
3300017975\|Ga0187782_10165352	All Organisms → cellular organisms → Bacteria → Acidobacteria	1650	Open in IMG/M
3300018034\|Ga0187863_10544767	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300018468\|Ga0066662_12470603	Not Available	547	Open in IMG/M
3300019241\|Ga0187793_1421550	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300019275\|Ga0187798_1871117	Not Available	554	Open in IMG/M
3300020579\|Ga0210407_11170014	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300020581\|Ga0210399_10009237	All Organisms → cellular organisms → Bacteria → Acidobacteria	7704	Open in IMG/M
3300021168\|Ga0210406_10576152	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300021180\|Ga0210396_10010366	All Organisms → cellular organisms → Bacteria → Acidobacteria	8766	Open in IMG/M
3300021181\|Ga0210388_11471693	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300021401\|Ga0210393_10538308	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300021401\|Ga0210393_11110797	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300021405\|Ga0210387_10108530	All Organisms → cellular organisms → Bacteria	2330	Open in IMG/M
3300021407\|Ga0210383_10267701	All Organisms → cellular organisms → Bacteria	1468	Open in IMG/M
3300021420\|Ga0210394_10467088	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300021433\|Ga0210391_10741252	All Organisms → cellular organisms → Bacteria → Acidobacteria	769	Open in IMG/M
3300021476\|Ga0187846_10393735	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300021477\|Ga0210398_10597439	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300021478\|Ga0210402_11025096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	752	Open in IMG/M
3300021559\|Ga0210409_10756424	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300021560\|Ga0126371_10367553	All Organisms → cellular organisms → Bacteria → Acidobacteria	1576	Open in IMG/M
3300022557\|Ga0212123_10043587	All Organisms → cellular organisms → Bacteria	4258	Open in IMG/M
3300022732\|Ga0224569_102358	All Organisms → cellular organisms → Bacteria	1539	Open in IMG/M
3300023056\|Ga0233357_1037182	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300025134\|Ga0207416_1029731	All Organisms → cellular organisms → Bacteria → Acidobacteria	2602	Open in IMG/M
3300025898\|Ga0207692_10271854	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300025928\|Ga0207700_10642682	All Organisms → cellular organisms → Bacteria → Acidobacteria	946	Open in IMG/M
3300027334\|Ga0209529_1055793	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300027605\|Ga0209329_1067071	All Organisms → cellular organisms → Bacteria → Acidobacteria	773	Open in IMG/M
3300027676\|Ga0209333_1016744	All Organisms → cellular organisms → Bacteria → Acidobacteria	2106	Open in IMG/M
3300027706\|Ga0209581_1261446	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	528	Open in IMG/M
3300027767\|Ga0209655_10099896	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300027853\|Ga0209274_10074155	All Organisms → cellular organisms → Bacteria → Acidobacteria	1648	Open in IMG/M
3300027853\|Ga0209274_10628986	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300027879\|Ga0209169_10079115	All Organisms → cellular organisms → Bacteria → Acidobacteria	1698	Open in IMG/M
3300027884\|Ga0209275_10225705	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300027884\|Ga0209275_10657410	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	603	Open in IMG/M
3300027895\|Ga0209624_10055038	All Organisms → cellular organisms → Bacteria → Acidobacteria	2551	Open in IMG/M
3300027895\|Ga0209624_10354631	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300027911\|Ga0209698_11256287	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	543	Open in IMG/M
3300028747\|Ga0302219_10404687	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300028773\|Ga0302234_10395456	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300028788\|Ga0302189_10392449	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300028906\|Ga0308309_10387776	All Organisms → cellular organisms → Bacteria	1196	Open in IMG/M
3300028906\|Ga0308309_11855757	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300029951\|Ga0311371_10025477	All Organisms → cellular organisms → Bacteria	10785	Open in IMG/M
3300029951\|Ga0311371_12202487	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300030007\|Ga0311338_11102351	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300030007\|Ga0311338_11150862	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300030007\|Ga0311338_11443247	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300030043\|Ga0302306_10428231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300030503\|Ga0311370_11541908	All Organisms → cellular organisms → Bacteria → Acidobacteria	692	Open in IMG/M
3300030503\|Ga0311370_11643150	All Organisms → cellular organisms → Bacteria → Acidobacteria	663	Open in IMG/M
3300030503\|Ga0311370_11959305	All Organisms → cellular organisms → Bacteria → Acidobacteria	587	Open in IMG/M
3300030524\|Ga0311357_10541769	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300030524\|Ga0311357_11710828	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300030737\|Ga0302310_10168007	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300030838\|Ga0311335_11113278	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	565	Open in IMG/M
3300031231\|Ga0170824_100936336	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300031234\|Ga0302325_10129670	All Organisms → cellular organisms → Bacteria → Acidobacteria	4595	Open in IMG/M
3300031234\|Ga0302325_13068230	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300031715\|Ga0307476_10456017	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300031718\|Ga0307474_10485317	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300031754\|Ga0307475_10136245	All Organisms → cellular organisms → Bacteria → Acidobacteria	1942	Open in IMG/M
3300031754\|Ga0307475_10957473	All Organisms → cellular organisms → Bacteria → Acidobacteria	674	Open in IMG/M
3300031823\|Ga0307478_10053713	All Organisms → cellular organisms → Bacteria → Acidobacteria	2996	Open in IMG/M
3300031941\|Ga0310912_10867799	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	695	Open in IMG/M
3300032160\|Ga0311301_11990027	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300032898\|Ga0335072_10194176	All Organisms → cellular organisms → Bacteria → Acidobacteria	2417	Open in IMG/M
3300033134\|Ga0335073_10801995	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300033158\|Ga0335077_10524978	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300033829\|Ga0334854_000072	All Organisms → cellular organisms → Bacteria → Acidobacteria	47481	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.55%
Host-Associated	Host-Associated	3.45%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.45%
Aquatic	Environmental → Aquatic	18.10%
Plants	Host-Associated → Plants	3.45%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.21%
Peat	Environmental → Terrestrial → Peat	16.38%
Freshwater	Environmental → Aquatic → Freshwater	12.07%
Sediment	Environmental → Aquatic → Sediment	4.31%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.72%
Cave	Environmental → Terrestrial → Cave	0.86%
Roots	Host-Associated → Plants → Roots	0.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.76%
Loam	Environmental → Terrestrial → Soil → Loam	21.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	16.38%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.07%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.31%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.72%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.86%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.24%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	16.38%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.31%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.59%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.72%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.86%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.86%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.86%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.79%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	13.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.48%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.31%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.45%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.45%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.59%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.59%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.59%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.59%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.59%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.72%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.72%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.72%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.72%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.72%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.72%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.86%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.86%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.86%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.86%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
3300001084	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1	Environmental	Open in IMG/M
3300001100	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005607	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019241	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019275	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022732	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU1	Host-Associated	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023056	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS2	Environmental	Open in IMG/M
3300025134	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027334	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A_all_C_01088940	2140918007	Soil	LGTGGTHIKLENVNGRIEIRHAQDGRALSPVKDLSHRDKDDDDDSI
JGI12648J13191_10182132	3300001084	Forest Soil	DLRGELGSGGPQIKLENVNGHIEIHHASDGRALSPAKDLNHGDDDDKI*
JGI12703J13194_1037092	3300001100	Forest Soil	RLENVNGRIEIRHASDGRALSPAKDLNHRDHDGDEDESEI*
JGI12635J15846_103330241	3300001593	Forest Soil	ELGSGGPQIKLENVNGHIEIHHASDGRALSPAKDLNHGDDDDKI*
JGIcombinedJ26739_1003893693	3300002245	Forest Soil	LGTGGTRIRLQNVNGRVQIHHAQDGRAMSPAKDLGHRDKDDDTI*
Ga0062384_1002380881	3300004082	Bog Forest Soil	GGPHIKLENVNGRIEIRHASDGRALSPVKDLSHRDKDDDEI*
Ga0062384_1004158692	3300004082	Bog Forest Soil	PRIKLENVNGRIEIRHASDGRALSPVKDLSHRDKDDDEI*
Ga0070713_1014998381	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	GSRIHLSDVNGRIEIRHAQDGRAMSPVKDRSHHDKDDDGSEI*
Ga0070711_1003476431	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	HIRLSDVNGRIDIHHAQDGHAMSPVKDLSRDSKKDDDDDSEI*
Ga0070733_108355621	3300005541	Surface Soil	NVNGRIEIHHAQDGRALSPVKDMNHGDKDEDDDDSSI*
Ga0066703_107030001	3300005568	Soil	SNVNGRIDIHHAQDGRAMSPVKDRNKHDKGDDDDTI*
Ga0070762_106953091	3300005602	Soil	GTHIKLENVNGRIEIHHAQDGRALSPVKDLSHRDKDDDDDSSI*
Ga0070740_104364961	3300005607	Surface Soil	NGGTHIRIENVNGHVEIHHAQDGHAMSPVKDRNHNDKDSDDDSEI*
Ga0075029_1005745372	3300006052	Watersheds	RISNVNGRVEVRHAQDGRALSPVKDLSHHNKDDDDDSSI*
Ga0075030_1005107381	3300006162	Watersheds	DVNGRIEIRHAQDGHAMSPVKDQNHHDKDDDDSEI*
Ga0075030_1014979642	3300006162	Watersheds	ELGSGGAHIRISNVNGRVEVRHAQDGRALSPVKDLSHHNKDDDDDSSI*
Ga0070716_1008669991	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	HLSDVNGRIEIRHAQDGRAMSPVKDRSHHDKDDDGSEI*
Ga0070765_1015537712	3300006176	Soil	GELGTGGPRIKLENVNGRIEIHHASDGRALSPVKDLGGRGDDEI*
Ga0097621_1007874202	3300006237	Miscanthus Rhizosphere	GTRIKLSNVNGRIDVHHAQDGRAMSPVKDRSQHDKDEDDDTI*
Ga0079222_111296361	3300006755	Agricultural Soil	GELGNGRVHIRLSDVNGRIEIHHAQDGHAMSPVKDLSRDSKDDDDSEI*
Ga0066710_1041920721	3300009012	Grasslands Soil	VNGRIEIRHASDNRALSPVKDLNRGSDSDRNEDDDSEI
Ga0116138_11635131	3300009552	Peatland	LGGGGMHIRLENVNGRIEVHHASDGRTLSPAKDLGQRDGDDDDDSKI*
Ga0116121_11668121	3300009644	Peatland	LKLENVNGHIEIRHASDGRALSPAKDLSHRDKDDDDDSEI*
Ga0126376_121070012	3300010359	Tropical Forest Soil	GNGGAHIKLSDVNGRVEIHHAQDGHSISPVKDRSRHDDDDDDSEI*
Ga0126379_138000402	3300010366	Tropical Forest Soil	LGNGGTHIKLNNVNGRIEIRHAQDGRAMSPVKDRGHHDNDDDDSTI*
Ga0126381_1002410243	3300010376	Tropical Forest Soil	GGTRIKVSSVNGRVAIHHAQDGRSLSPVKDRSHGGDDDSI*
Ga0136449_1045458061	3300010379	Peatlands Soil	GHIEIRHASDGRALSPVKDLSQRHRDSDDDDDSEI*
Ga0150983_116215002	3300011120	Forest Soil	VNGRIEIHHAQDGRAISPVKDLSHSDKDDDDDSI*
Ga0150983_139826611	3300011120	Forest Soil	VNGRIEIRHASDGRALSPVKDLNHRDRDNDDEDDSEI*
Ga0137392_104718312	3300011269	Vadose Zone Soil	GTRIELKNVNGRIEVRHAEDGRALSPVKDLSHQDRDKDDDDSEI*
Ga0137393_117184021	3300011271	Vadose Zone Soil	IELKNVNGRIEVRHAEDGRALSPVKDLSHRDQDDDHDDSEI*
Ga0181517_100302611	3300014160	Bog	NGRIEVHHASDGRTLSPAKDLGQRDGDDDDDSKI*
Ga0181522_107597381	3300014657	Bog	RIELKNVNGRIEVHHATDGRTLSPVKDLSHRDGDDKDDSEI*
Ga0181519_101777621	3300014658	Bog	NGRIEIHHAQDGRALSPAKDTGHHDKDDDDDSSI*
Ga0132255_1000058101	3300015374	Arabidopsis Rhizosphere	LSNVNGHVEIHHAQDGHAMSPVKDRSGHDKDDDDESKI*
Ga0132255_1037286111	3300015374	Arabidopsis Rhizosphere	KLSNVNGRIEVHHAQDGRAMSPVKDRSQHDKDDDDDTI*
Ga0187818_100474601	3300017823	Freshwater Sediment	THIRLQNVNGRIDIHHAQDGHALSPVRDLSHGDGDDDTI
Ga0187849_100381813	3300017929	Peatland	RIKLSNVNGRIEIRHASDGRVLSPAKDLGHRDKDDDDDREI
Ga0187821_101038412	3300017936	Freshwater Sediment	THIKLENVNGRIEIHHAQDGHAMSPVKDRNHGSHDDDDDSDI
Ga0187817_102206281	3300017955	Freshwater Sediment	IKLSNVNGRVEIHHAQDGRTMSPVKNRSQHDKDDDSEI
Ga0187817_108438432	3300017955	Freshwater Sediment	GGTHIRLKNVNGRIDIHHAQDGHALSPVKDLSHGDGDDDTI
Ga0187779_109392761	3300017959	Tropical Peatland	LGSGGARIHLSNVNGHIEIHHANDGRTMSPVKDLSREDRDDDDDSTI
Ga0187782_100920951	3300017975	Tropical Peatland	LGNGGTRIKLENVNGRISIHHAQDGRTLSPVKDLSHHDRDEDDDSQI
Ga0187782_101653521	3300017975	Tropical Peatland	RNVNGRVEIHHAQDGRAVSPVKDRNHHNDDDDSEI
Ga0187863_105447671	3300018034	Peatland	IKLENVNGHIEIRHASDGRALSPVKDLSHRDGDDDDDSKI
Ga0066662_124706032	3300018468	Grasslands Soil	GGGTRIKLSNVNGTIEIHHASDNRALSPVKDLNRNSDRDRDEDDDSEI
Ga0187793_14215502	3300019241	Peatland	SNVNGHIEVHHAQDGRALSPVKDLNHRDHDDDDDSEI
Ga0187798_18711172	3300019275	Peatland	HIKLSDVNGRIEIHHAQDGRALSPVKDLGRREHDSDDEDDSEI
Ga0210407_111700141	3300020579	Soil	HIKLADVNGRIEIRHAQDGRALSPVKDLGGRDKDDDDDSEI
Ga0210399_1000923710	3300020581	Soil	KLANVNGRIEVHHAQDGRALSPVKDLSHSDKDDEDDDSSI
Ga0210406_105761523	3300021168	Soil	ENVNGRIEIRHASDGRALSPVRDLSHRDKDDDDDSEI
Ga0210396_100103661	3300021180	Soil	DLRGELGTGGPRIKLENVNGRIEIRHASDGRALSPVKDLSRRDDDDEI
Ga0210388_114716932	3300021181	Soil	GAHISLKNVNGRIEIRHAQDGRAMSPVKDLGHRDDDDSI
Ga0210393_105383082	3300021401	Soil	GEVGSGGARIKLENVNGQVVIHHAQDGHSMSPVKDLSQHDGDDDDDSEI
Ga0210393_111107972	3300021401	Soil	GTGGAHIKLENVNGGIEIHHARDGKAISPVKDLSHHDHDDDDDSI
Ga0210387_101085304	3300021405	Soil	GPRIKLEDVNGHIEIRHASDGRTLSPVKDLSHRDHDNDGDDDSEM
Ga0210383_102677013	3300021407	Soil	LGSGGARIKLANVNGRIEIRHASDGRSLSPVKDLSHRDKDEDDDGEI
Ga0210394_104670882	3300021420	Soil	RGELGTGGTHIELKNVNGRIQIHHAQDGRALSPAKDLNHHDGDGDSI
Ga0210391_107412521	3300021433	Soil	LRGELGTGGPRINLENVNGRIEIHHASDGRALSPVKDLGGRGDDEI
Ga0187846_103937351	3300021476	Biofilm	DVNGRIEIRHAQDGHAMSPVKDRNHSDKDDDDSEI
Ga0210398_105974391	3300021477	Soil	LKNVNGRIAVHHASDGRTLSPVKDLSHRDGDDKDDSEI
Ga0210402_110250962	3300021478	Soil	VNGRIEIRHAQDGRALSPVKDMSGSDKDDDDDSSI
Ga0210409_107564242	3300021559	Soil	LRGELGTGGTRIKLEDVNGRIEIHHAQDGRALSPVKDLSHSDKDDDDDSI
Ga0126371_103675533	3300021560	Tropical Forest Soil	HIDLRNVNGRVEIRHAQDGRAISPVKDRNHHNDDDDSEI
Ga0212123_100435874	3300022557	Iron-Sulfur Acid Spring	DLSGELGSGGARIKLSDVNGRVEIHHAQDGHAISPVKDRSHRHDDDDDSEI
Ga0224569_1023583	3300022732	Rhizosphere	ELGNGGPHIKLENVNGRIEIRHASDGRALSPAKDLSHGDKDNGDDSEI
Ga0222622_106533282	3300022756	Groundwater Sediment	GPRIKLSNVNGTIEIRHASDNRTLSPVKDLNRGSDSDRDEDDDNEI
Ga0233357_10371821	3300023056	Soil	GTRIKLGNVNGRIEIHHAQDGRAMSPVKDLSHRDKDDDDTI
Ga0207416_10297313	3300025134	Iron-Sulfur Acid Spring	VARIKLSDVNGRVEIHHAQDGHAISPVKDRSHRHDDDDDSEI
Ga0207692_102718541	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	LSNVNGRIDVHHAQDGRAMSPVKDRSQHDKDEDDDTI
Ga0207700_106426823	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	RLSDVNGRIEIHHAQDGHAMSPVKDLSRDSKDDDDSEI
Ga0209529_10557931	3300027334	Forest Soil	GPRIKLSSVNGRIEIRHASDGRALSPAKDLSHHEKDDEDDSEI
Ga0209329_10670711	3300027605	Forest Soil	IRLENVNGRIEIRHASDGRALSPVKDLSHRDKDDDDDESEI
Ga0209333_10167443	3300027676	Forest Soil	KNVNGRIAVHHASDGRTLSPVKDLSHRDGDDKDDSEI
Ga0209581_12614461	3300027706	Surface Soil	GNGGTHIRIENVNGHVEIHHAQDGHAMSPVKDRNHNDKDSDDDSEI
Ga0209655_100998961	3300027767	Bog Forest Soil	NVNGRIEIRHASDGRALSPVKDLGDRDKDDDDSEI
Ga0209274_100741551	3300027853	Soil	GELGTGGAHIKLENVNGGIEIHHAQDGKAMSPVKDMSRRDHDGDDDTI
Ga0209274_106289862	3300027853	Soil	VNGRIEIRHASDGRALSPAKDLGHRDKDDDDDSEI
Ga0209169_100791153	3300027879	Soil	GGTQIKLDNVNGKIEIHHAQDGRSLSPVKDLGDRDEGDDSI
Ga0209275_102257052	3300027884	Soil	TRIELKNVNGRIAVHHASDGRTLSPVKDLSHRDGDDKDDSEI
Ga0209275_106574102	3300027884	Soil	GTHIKLENVNGRIEIHHAQDGRALSPVKDLSHRDKDDDDDSSI
Ga0209624_100550381	3300027895	Forest Soil	PRIKLETVNGRIEIRHASDGRALSPVKDLSGRDKDGDDEI
Ga0209624_103546312	3300027895	Forest Soil	GGPRIKLENVNGRIEIRHASDGRALSPVKDLSRRDDDDEI
Ga0209698_112562871	3300027911	Watersheds	SGGAHIRISNVNGRVEVRHAQDGRALSPVKDLSHHNKDDDDDSSI
Ga0302219_104046872	3300028747	Palsa	KLENVNGRINIRHAQDGRTMSPVKDRSHRDKDDDDDSEI
Ga0302234_103954562	3300028773	Palsa	LNNVNGRIEINHAQDGRALIPVKDLSHRDKDDDDDSI
Ga0302189_103924491	3300028788	Bog	GELGSGGPRIKLENVNGRIEIRHASDGRALSPAKDLNHRDKDDEDESEI
Ga0308309_103877762	3300028906	Soil	RGELGNGGPHIKLENVNGRIEIRHASDGRALSPAKDLSHGDKDDDDDSEI
Ga0308309_118557571	3300028906	Soil	KLESVNGHIEIHHASDGRTLSPVKDLNHRNGDDDDI
Ga0311371_1002547710	3300029951	Palsa	ENVNGRIEIRHASDGRALSPAKDLSHRDKDDDGSEI
Ga0311371_122024871	3300029951	Palsa	LEDVNGRIQIRHASDGRALSPVKDLSHRDKDDDDDSKI
Ga0311338_111023511	3300030007	Palsa	GPRVKLENVNGRINIRHASDGRALSPAKDLSHGDKDDDDDSKI
Ga0311338_111508622	3300030007	Palsa	RIKLANVNGHINIHHASDGRALSPVKDLSGRDDDDDSKI
Ga0311338_114432472	3300030007	Palsa	VKLENVNGRIDIRHASDGRALSPAKDLSHNDKDDDDDSKI
Ga0302306_104282311	3300030043	Palsa	IKLNNVNGRIEINHAQDGRALSPVKDLSHRDKDDDDDSI
Ga0311370_115419082	3300030503	Palsa	ARIKLEDVNGRIDIRHASDGRALSPVKDLSHGNDADDI
Ga0311370_116431502	3300030503	Palsa	GGPHIKLENVNGHISIHHAPDGRALSPAKDLNHGDDDDKI
Ga0311370_119593051	3300030503	Palsa	RLENVNGRIDVRHAQDGRALSPVKDLSHRDKDDDDDSEI
Ga0311357_105417691	3300030524	Palsa	GPHIKLENVNGRIEIRHASDGRALSPAKDLSHRDKDDDGSEI
Ga0311357_117108282	3300030524	Palsa	GGGARIKLEDVNGRIDIRHASDGRALSPVKDLSHGNDADDI
Ga0302310_101680073	3300030737	Palsa	ELGSGGPHIKLENVNGHISIHHAPDGRALSPAKDLNHGDDDDKI
Ga0311335_111132782	3300030838	Fen	TRIKLNNVNGRIEILHAGDGRALSPAKDNGNHDDDDTI
Ga0170824_1009363362	3300031231	Forest Soil	GSGGTHIKLADVNGRIEIRHAQDGRALSPVKDLGGRDKDDDDDSEI
Ga0302325_101296701	3300031234	Palsa	LENVNGRIDVRHAQDGRALSPVKDLSHRDKDDDDDSEI
Ga0302325_130682302	3300031234	Palsa	ELGNGGPRVKLENVNGRINIRHASDGRALSPAKDLSHGDKDDDDDSKI
Ga0307476_104560172	3300031715	Hardwood Forest Soil	SGGPRIKLENVNGHIEIHHASDGRALSPVKDLSHRDRDDDDEI
Ga0307474_104853172	3300031718	Hardwood Forest Soil	ARIRLENVNGRIEIRHASDGRALSPAKDLNHRDHDGDEDESEI
Ga0307475_101362451	3300031754	Hardwood Forest Soil	KLANVNGHIEIHHASDGRTLSPVRDLSHRDKDGDDDESEI
Ga0307475_109574731	3300031754	Hardwood Forest Soil	ANVNGGIEIHHAQDGRALSPVKDMNHNDKDDDDDSSI
Ga0307478_100537134	3300031823	Hardwood Forest Soil	GPRIKLENVNGHIEIHHASDGRALSPVKDLSHRDKDDDDEI
Ga0310912_108677992	3300031941	Soil	GKGGTRIHLSDVNGRIEIRHAQDGHAISPVKDRNHSDKDDDDSSI
Ga0311301_119900272	3300032160	Peatlands Soil	NVNGRIEIHHAQDGRALSPVKDLNHHDRDDDDDSEI
Ga0335072_101941763	3300032898	Soil	GKGGTRIKLSDVNGRVSIHHAQDGHAMSPVKDRGDRDDDDSEI
Ga0335073_108019952	3300033134	Soil	AHIHLSDVNGRIDIHHAQDGRAMSPVKDRGGDGKDDDEI
Ga0335077_105249783	3300033158	Soil	RIKISNVNGHIEIRHASDGHAMSPVKDRDKDDDDSEI
Ga0334854_000072_47329_47481	3300033829	Soil	RGELGNGGPRIKLENVNGRVKIRHASDGRALSPAKDLSRGDKDDDDDSEI

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079100

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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