NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F079133

Metagenome / Metatranscriptome Family F079133

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F079133
Family Type Metagenome / Metatranscriptome
Number of Sequences 116
Average Sequence Length 85 residues
Representative Sequence LTADEICLTLPADDAFHGVAHLVLGGLAARLNLSFETLEDLELALDALLERPSDGREVTVRVLVEDGELRTTVGPFAAVRAE
Number of Associated Samples 103
Number of Associated Scaffolds 116

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 97.41 %
% of genes near scaffold ends (potentially truncated) 98.28 %
% of genes from short scaffolds (< 2000 bps) 96.55 %
Associated GOLD sequencing projects 96
AlphaFold2 3D model prediction Yes
3D model pTM-score0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (99.138 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(26.724 % of family members)
Environment Ontology (ENVO) Unclassified
(27.586 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(56.034 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 33.64%    β-sheet: 21.82%    Coil/Unstructured: 44.55%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.58
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 116 Family Scaffolds
PF03054tRNA_Me_trans 95.69
PF03330DPBB_1 1.72

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 116 Family Scaffolds
COG0482tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domainTranslation, ribosomal structure and biogenesis [J] 95.69

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.14 %
UnclassifiedrootN/A0.86 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459007|GKWS7RC02IRBDAAll Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia517Open in IMG/M
3300000880|AL20A1W_1071715All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1809Open in IMG/M
3300004114|Ga0062593_101097918All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria825Open in IMG/M
3300004479|Ga0062595_101531320All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300004480|Ga0062592_102372190All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300005187|Ga0066675_10620791All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria812Open in IMG/M
3300005187|Ga0066675_11289497All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300005330|Ga0070690_100514491All Organisms → cellular organisms → Bacteria898Open in IMG/M
3300005334|Ga0068869_101177598All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria673Open in IMG/M
3300005337|Ga0070682_100930871All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria716Open in IMG/M
3300005366|Ga0070659_101935159All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia529Open in IMG/M
3300005447|Ga0066689_10336665All Organisms → cellular organisms → Bacteria940Open in IMG/M
3300005447|Ga0066689_10467187All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria793Open in IMG/M
3300005526|Ga0073909_10582013All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium551Open in IMG/M
3300005530|Ga0070679_101597664All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria600Open in IMG/M
3300005545|Ga0070695_100392032All Organisms → cellular organisms → Bacteria1050Open in IMG/M
3300005569|Ga0066705_10431737All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria825Open in IMG/M
3300005587|Ga0066654_10558054All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria631Open in IMG/M
3300005598|Ga0066706_10758959All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria768Open in IMG/M
3300005614|Ga0068856_101963299All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia596Open in IMG/M
3300005617|Ga0068859_100268607All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1797Open in IMG/M
3300005764|Ga0066903_102274385All Organisms → cellular organisms → Bacteria1047Open in IMG/M
3300005841|Ga0068863_100951834All Organisms → cellular organisms → Bacteria860Open in IMG/M
3300006031|Ga0066651_10611494All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales580Open in IMG/M
3300006173|Ga0070716_100117246All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1661Open in IMG/M
3300006173|Ga0070716_101529969All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales546Open in IMG/M
3300006791|Ga0066653_10312073All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria792Open in IMG/M
3300006796|Ga0066665_10144154All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1801Open in IMG/M
3300006796|Ga0066665_11130406All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria597Open in IMG/M
3300006800|Ga0066660_10946204All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300006806|Ga0079220_10278342All Organisms → cellular organisms → Bacteria1020Open in IMG/M
3300006854|Ga0075425_101002213All Organisms → cellular organisms → Bacteria953Open in IMG/M
3300009012|Ga0066710_100618068Not Available1645Open in IMG/M
3300009038|Ga0099829_10828060All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria768Open in IMG/M
3300009094|Ga0111539_13535230All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria501Open in IMG/M
3300009098|Ga0105245_10171502All Organisms → cellular organisms → Bacteria2066Open in IMG/M
3300009098|Ga0105245_11851600All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria656Open in IMG/M
3300009551|Ga0105238_10565731All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1142Open in IMG/M
3300009807|Ga0105061_1026565All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria799Open in IMG/M
3300009811|Ga0105084_1087044All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria580Open in IMG/M
3300009840|Ga0126313_10397927All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1092Open in IMG/M
3300010046|Ga0126384_10734255All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria878Open in IMG/M
3300010136|Ga0127447_1124512All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria503Open in IMG/M
3300010325|Ga0134064_10054946All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1228Open in IMG/M
3300010362|Ga0126377_10703527All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1063Open in IMG/M
3300010364|Ga0134066_10160966All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium713Open in IMG/M
3300010371|Ga0134125_11402679All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria761Open in IMG/M
3300010371|Ga0134125_11933741All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria641Open in IMG/M
3300012096|Ga0137389_10873281All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria772Open in IMG/M
3300012208|Ga0137376_11260118All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium629Open in IMG/M
3300012285|Ga0137370_10641759All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria659Open in IMG/M
3300012285|Ga0137370_11018314All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria509Open in IMG/M
3300012349|Ga0137387_11098867All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria566Open in IMG/M
3300012350|Ga0137372_11006009All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria581Open in IMG/M
3300012685|Ga0137397_11320645All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria512Open in IMG/M
3300012923|Ga0137359_11710338All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria516Open in IMG/M
3300012930|Ga0137407_10524424All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1108Open in IMG/M
3300012951|Ga0164300_10910519All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria557Open in IMG/M
3300012955|Ga0164298_10175209All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1230Open in IMG/M
3300012955|Ga0164298_10683758All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria717Open in IMG/M
3300012961|Ga0164302_11673961All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria532Open in IMG/M
3300014157|Ga0134078_10274313All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium716Open in IMG/M
3300014968|Ga0157379_11653902All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria626Open in IMG/M
3300015200|Ga0173480_11185330All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria515Open in IMG/M
3300015357|Ga0134072_10215464All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium673Open in IMG/M
3300017656|Ga0134112_10521418All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria506Open in IMG/M
3300017659|Ga0134083_10412550All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria591Open in IMG/M
3300018027|Ga0184605_10334521All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria684Open in IMG/M
3300018054|Ga0184621_10031914All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1687Open in IMG/M
3300018066|Ga0184617_1054269All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1028Open in IMG/M
3300018076|Ga0184609_10498763All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria555Open in IMG/M
3300018482|Ga0066669_10090260All Organisms → cellular organisms → Bacteria2093Open in IMG/M
3300019361|Ga0173482_10430494All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium622Open in IMG/M
3300020012|Ga0193732_1036001All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria853Open in IMG/M
3300020015|Ga0193734_1041378All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria857Open in IMG/M
3300020022|Ga0193733_1133367All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria681Open in IMG/M
3300021073|Ga0210378_10047004All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1703Open in IMG/M
3300021080|Ga0210382_10408255All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria601Open in IMG/M
3300021951|Ga0222624_1562094All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria657Open in IMG/M
3300022694|Ga0222623_10340267All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria574Open in IMG/M
3300025898|Ga0207692_11076509All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria532Open in IMG/M
3300025927|Ga0207687_10933955All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria743Open in IMG/M
3300025936|Ga0207670_10114566All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1949Open in IMG/M
3300025939|Ga0207665_10381533All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1070Open in IMG/M
3300026078|Ga0207702_12332134All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria523Open in IMG/M
3300026335|Ga0209804_1134889All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1114Open in IMG/M
3300026527|Ga0209059_1346199All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria504Open in IMG/M
3300026538|Ga0209056_10207263All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1429Open in IMG/M
3300026547|Ga0209156_10470681All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria519Open in IMG/M
3300026550|Ga0209474_10671316All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria535Open in IMG/M
3300026552|Ga0209577_10830768All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria517Open in IMG/M
3300027862|Ga0209701_10580714All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria598Open in IMG/M
3300027907|Ga0207428_11236673All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria519Open in IMG/M
3300027957|Ga0209857_1091503All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria509Open in IMG/M
3300028710|Ga0307322_10003468All Organisms → cellular organisms → Bacteria3320Open in IMG/M
3300028710|Ga0307322_10017330All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1638Open in IMG/M
3300028713|Ga0307303_10019808All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1279Open in IMG/M
3300028713|Ga0307303_10020296All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1267Open in IMG/M
3300028754|Ga0307297_10401395All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria507Open in IMG/M
3300028755|Ga0307316_10272266All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria617Open in IMG/M
3300028787|Ga0307323_10070569All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1241Open in IMG/M
3300028807|Ga0307305_10173178All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria995Open in IMG/M
3300028810|Ga0307294_10038609All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1346Open in IMG/M
3300028810|Ga0307294_10270255All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria609Open in IMG/M
3300028811|Ga0307292_10132272All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria999Open in IMG/M
3300028814|Ga0307302_10239761All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium888Open in IMG/M
3300028814|Ga0307302_10577173All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria559Open in IMG/M
3300028824|Ga0307310_10030057All Organisms → cellular organisms → Bacteria2180Open in IMG/M
3300028828|Ga0307312_10404611All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria896Open in IMG/M
3300028878|Ga0307278_10355444All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria646Open in IMG/M
3300028878|Ga0307278_10475863All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria546Open in IMG/M
3300028880|Ga0307300_10077960All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium974Open in IMG/M
3300028881|Ga0307277_10279917All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria738Open in IMG/M
3300031199|Ga0307495_10146038All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria607Open in IMG/M
3300031421|Ga0308194_10255323All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria590Open in IMG/M
3300031716|Ga0310813_11647150All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium600Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil26.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil15.52%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil9.48%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil6.03%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.31%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.45%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.59%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.59%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand2.59%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.59%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.59%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.72%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.72%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.72%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.72%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.72%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.72%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.72%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.86%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.86%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.86%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.86%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.86%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.86%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.86%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.86%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.86%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.86%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.86%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459007Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 10-21cmEnvironmentalOpen in IMG/M
3300000880Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-65cm-20A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009807Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10EnvironmentalOpen in IMG/M
3300009811Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010136Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300020012Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1EnvironmentalOpen in IMG/M
3300020015Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1EnvironmentalOpen in IMG/M
3300020022Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021951Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)EnvironmentalOpen in IMG/M
3300026527Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027957Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20 (SPAdes)EnvironmentalOpen in IMG/M
3300028710Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380EnvironmentalOpen in IMG/M
3300028713Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184EnvironmentalOpen in IMG/M
3300028754Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157EnvironmentalOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028810Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151EnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300028880Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300031199Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_SEnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
L02_057027102170459007Grass SoilVIADEIRLTLPADDAFYGVAHLVLGGLAARLNLTFENLEDLELALDSLLERRRDGREVTLRVLVEDGEFRMIVGPSRQCARSSRKAGWTR
AL20A1W_107171513300000880PermafrostLFVLPKGPDWRDTLTADEICLTLPADDAFHGVAHLVLGGLAARLNLSFETLEDLELALDALLESPNDGREVTVRVFVEDGELRTIVGPFTSVRAELGEGGANSLN
Ga0062593_10109791823300004114SoilLNGDQISLTLPADEAFHRVAHLVLGGLAVRLDLTYERLEDLELAVDALLERHADGQDVTLVVRVLDGALQTSVGPLESVREELQHGRGETLDLGRILGTVC
Ga0062595_10153132013300004479SoilVSGDEIWLTLPADEAFHGVAHLVLGGLAVRLDLTYEDLQDLELALDTLLERSNDDGDVTLLVQVGDGNVRAVVGPFSSLRAELEANGGD
Ga0062592_10237219013300004480SoilLSGDEIQLTLPGDESFHRVAHLVLGGLAVRLNLTFENLEDLELALDALLERTQADDEIQLRVRVLDGELQTVVGPFASVRAELEQGGDALTL
Ga0066675_1062079113300005187SoilVSGDEIWLTLPADEAFHGVAHLVLGGLAVRLDLTYEDLQDLELALDTLLERSNDDGDVTLLVQVGDGNVRAVVGPFSSLRAELEA
Ga0066675_1128949713300005187SoilVSGDEICLTLPADEAFHGVAHLVLGGLAVRLDLTYENLQDLELALDALLERSSEDGDVTVLVRVGDGAVHTVVGPFS
Ga0070690_10051449113300005330Switchgrass RhizosphereLSVDEICLKLPADDAFHGVAHLVLGGLAVRLDLTFEYLEDLELALDALLDRPSAGDELTVRVLVADGELRTIVGPFTSLRAEYEDVGGAQDLNLHRILSA
Ga0068869_10117759823300005334Miscanthus RhizosphereLSVDEICLKLPADDAFHGVAHLVLGGLAVRLDLTFEYLEDLELALDALLDRPSAGDELTVRVLVADGELRTIVGPFTSLRAEY
Ga0070682_10093087113300005337Corn RhizosphereLRVDEITLTLPADDAFRRVAHLVLGGLAVRLDLTYESLEDLELALDTLLERSPDDEDVTVRVRVDGDELRTIV
Ga0070659_10193515913300005366Corn RhizosphereLSVDEISLTLPADNAFHGVAHLVLGGLAVRLDLTLEHLEDLELALDALLERTASDGDVTVRVRVLDQELKTSVGPFM
Ga0066689_1033666523300005447SoilVSGDEIHLTLPADEAFHGVAHLVLGGLAVRLDLTYEDLQDLELGLDALLERSSDDGDVTLLLRVGDGTIQTIVGPFSSLRTELEADSVGDSLNLKR
Ga0066689_1046718713300005447SoilVSGDEICLTLPADEAFHGVAHLVLGGLAVRLDLTYENLQDLELALDALLERSSEDGDVTVLVRVGDGAVHTVVGP
Ga0073909_1058201313300005526Surface SoilVDEITLTLPADDAFRRVAHLVLGGLAVRLDLTYESLEDLELALDTLLERSPDDEDVTVRVRVDG
Ga0070679_10159766423300005530Corn RhizosphereLSVDEICLKLPADDAFHGVAHLVLGGLAVRLDLTFEYLEDLELALDALLDRPSAGDELTVRVLVADGEL
Ga0070695_10039203223300005545Corn, Switchgrass And Miscanthus RhizosphereLSVDEICLKLPADDAFHGVAHLVLGGLAVRLDLTFEYLEDLELALDALLDRPSAGDELTVRVLVADGELRTIV
Ga0066705_1043173713300005569SoilLSGDEISLTLPADEAFHRVAHLVLGGLAVRLDLTFEHLEDLELALDALLERPLTDEVLTLRVRMLDGELRTTVGPFAALRTELERGGIESL
Ga0066654_1055805423300005587SoilVDEIALTLPADEAFSGVAHLVLGGLAVRLGLTVEILEDLELALDALLDRSENASENELTIQVRVGDTEMQTIVGPYHDDIRKELEHDGG
Ga0066706_1075895923300005598SoilVDEIALTLPADEAFSGVAHLVLGGLAVRLGLTVEILEDLELALDALLDRSENASENELTIQVRVGDTEMQT
Ga0068856_10196329913300005614Corn RhizosphereLSGDEIQLRLPADEAFHSVAHLVLGGLAVRLNLTFENLEDLELALDALLERARPDDGVTLRVHVLDGELRTVVGPFTSVRAELEQGGQ
Ga0068859_10026860713300005617Switchgrass RhizosphereLSVDEICLKLPADDAFHGVAHLVLGGLAVRLDLTFEYLEDLELALDALLDRPSAGDELTVRVLVADGELRTIVGPFTSLRAEYEDVGGAQDLNLHRIL
Ga0066903_10227438513300005764Tropical Forest SoilMTGDEIVLTLPADDDFRRVAHLVLGGLAARIDLTFEHLEDLKLALDGLLERRGDDGDITLAVRLEDDALAASIGPFVPEML
Ga0068863_10095183423300005841Switchgrass RhizosphereLSVDEICLKLPADDAFHGVAHLVLGGLAVRLDLTFEYLEDLELALDALLDRPSAGDELTVRVLVAD
Ga0066651_1061149423300006031SoilVSGDEIQLTLPADDAFHHVAHLVLGGLAARLNISVESLEDLELALDALLERAQTDDGVTLRVRVLDGELRTVVGPFASVRSEL
Ga0070716_10011724623300006173Corn, Switchgrass And Miscanthus RhizosphereLSGDEIQLTLPADEAFHGVAHLVLGGLAVRLNLTFENLEDLELALDALLERAQMDNGVSLRVRLLDGELR
Ga0070716_10152996923300006173Corn, Switchgrass And Miscanthus RhizosphereVIADEIRLTLPADDAFYGVAHLVLGGLAARLNLTFENLEDLELALDSLLERRNDGREVTLRVLVEDGELRMIIGPFTAVRAELEEGGVDSLNLNRIL
Ga0066653_1031207313300006791SoilLSGDEIQLMLPADEAFHRVAHLVMGGLAVRLNLTFESLEDLELALDALLERAKTDEGVTLRVRVLDGELKTLVGPFASVRAELEQGSAASLNLSRIL
Ga0066665_1014415413300006796SoilVIADEIRLTLPADDAFHGVAHLVLGGLAARLNLSFENLEDLGLALDSLLERPSDGREVTLRVLVEDGELRMIVGPFTAVRAELGEGGADSLN
Ga0066665_1113040613300006796SoilVSGDEICLTLPADEAFHGVAHLVLGGLAVRLDLTYEDLQDLELALDALLERSSEDGEVTLLLRVGDGTIHTVVGPFSSLRAELAEDGVGD
Ga0066660_1094620413300006800SoilMSGDEIRLTLPADEAFHGVAHLVLGGLAVRLDLTYQDLQDLELAFDTLLERSNEDGDVTLVVHVGNGTVRTVVGPFSS
Ga0079220_1027834223300006806Agricultural SoilMSGDQIELTLPGDEAFHGVAHLVLGGLAVRQNLSFESLEDLELALDALLERVQGDDGVILQMRILDGELHTKVGPFAHVRAEL
Ga0075425_10100221323300006854Populus RhizosphereLSGDEIQLRLPADEAFHSVAHLVLGGLAVRLNLTFENLEDLELALDALLERARSDDGVTLRVHVLDGELRTVVGPFTSVRAELEQGGQDALNLSRI
Ga0066710_10061806813300009012Grasslands SoilVDEISLTLPADEAFHRVAHLVLAGLAARLDFTFETLEDLELALDALLERFGDTEEVELRVRVHDGEL
Ga0099829_1082806013300009038Vadose Zone SoilVSADEICLTLPADDAFHSVAHLVLGGLAMRLDLTMETLEDLELALDTLLDRCEGSGGDEVTVRVRVD
Ga0111539_1353523023300009094Populus RhizosphereVSGDEIQLTLPADDAFHHVAHLVLGGLAARLNLSVESLEDLELALDALLEHAQTDDGVTLRVRVLDGELRTVVGPFASVRSELEQGD
Ga0105245_1017150233300009098Miscanthus RhizosphereLSVDEISLTLPADDAFHGVAHLVLGGLAVRLDLTLEHLEDLELALDALLERTASDGDVTVRVRVLEQELKTSVGPFSSVRHELESSDQLNLARII
Ga0105245_1185160023300009098Miscanthus RhizosphereMDELRVDEITLTLPADDAFRRVAHLVLGGLAVRLDLTYESLEDLELALDTLLERTPDEEDVTVLVRVEG
Ga0105238_1056573123300009551Corn RhizosphereLSVDEICLKLPADDAFHGVAHLVLGGLAVRLDLTFEYLEDLELALDALLDRPSAGDELTVRVLVADGELRTIVGPF
Ga0105061_102656513300009807Groundwater SandMSGDEISLTLPADDAFHSVAHLVLGGLAVRLDLTFENLEDLELAIDALLERSTDGTDVTLLVRVLDGELQAVVGPFDAVRSELEEGGEESLN
Ga0105084_108704413300009811Groundwater SandMSGDEISLTLPADDAFHSVAHLVLGGLAVRLDLTFENLEDLELAIDALLERSTDGTDVTLLVRVLDGELQAVVGPFDAVRSELEEGGEESLNLRRIL
Ga0126313_1039792713300009840Serpentine SoilMGDEISLTLPADEAFHGVAHLVLGELAVRLDLTFEHLEDLELALDTLLKQAVREDEVTVRVHVLDGELRTVVGPFAGVRTQLDQGGD
Ga0126384_1073425513300010046Tropical Forest SoilLSVDEIQLTLPSDEAFQRVAHLVLGGLAVRLNLTFESLEDLELALDALLERAKTDEDIVLRVQVLDGELHTIVGPFASVRMELEQGGA
Ga0127447_112451213300010136Grasslands SoilVSGDEIQLTLPADVAFHGVAHLVLGGLAVRLDLTYEDLQDLELALDTLLDWSNDEGDVTLVVHVDDGSVRAVVGPFDSLRRELEGDGGDSLD
Ga0134064_1005494623300010325Grasslands SoilLSGDEIQLMLPADEAFHRVAHLVMGGLAVRLNLTFESLEDLELALDALLERAKTDDGVTLRVRVLDGELKTLVGPFAAVRAEL
Ga0126377_1070352723300010362Tropical Forest SoilLSGDEIQLTLPADEAFHRVAHLVLGGLAVRLNLTFESLEDLELALDALLGRTRTNDGITLRVHVLDGELRTVVGPFSS
Ga0134066_1016096623300010364Grasslands SoilLSGDEIQLMLPADEAFHRVAHLVMGGLAVRLNLTFESLEDLELALDALLERAKTDDGVTLRVRVLDGELKTLVGPFASVRAELEQGSAASLNLSRIL
Ga0134125_1140267913300010371Terrestrial SoilLRVDEITLTLPADDAFRRVAHLVLGGLAVRLDLTYESLEDLELALDTLLERSPDDEDVTVRVRVDGDEL
Ga0134125_1193374113300010371Terrestrial SoilLEGHVTADEICLTLPADDAFHGVAHLVLGGLAARLNLSFETLEDLELALDALLERPNDGREVTVRVFVEDGELRTIVGPFTSVRADLEEGGTSS
Ga0137389_1087328123300012096Vadose Zone SoilVSADEICLTLPADDAFHSVAHLVLGGLAVRLNVTYENLEDLELALDALLERPSSGGEVTLRVLVEDGELRTIVGPFTSVRAELE
Ga0137376_1126011823300012208Vadose Zone SoilVSGDEICLTLPADEAFHGVAHLVLGGLAVRLDLTYENLQDLELALDALLERSSEDGDVTVLVRVGDGAVHTVVGPF
Ga0137370_1064175913300012285Vadose Zone SoilLSGDEISLTLPADEAFHRVAHLVLGGFALRQDLTYENLEDLELALDPLLERTQGQEAVIVRIRIGHGELRTTGGPFAAMRPGLDRAGA
Ga0137370_1101831413300012285Vadose Zone SoilVVADEISLMLPADDAFHGVAHLVLGGLAARLNLSFEHLEDLELALDSLLERPSDGREVTLRVVVEDRVLRTIVGPFSSVRADLED
Ga0137387_1109886713300012349Vadose Zone SoilVIADEIRLTLPADDAFHSVAHLVLGGLAARLNLTFENLEDLELALDSLLESPSDGREVTLRVLVEDGELRMIVGPFSSVRAELEEGGADSLNLRRILGAVCDS
Ga0137372_1100600923300012350Vadose Zone SoilMDEIALTLPADEAFHSVAHLVLGGLAVRLDLTVEMLEELALALEALLQRSEEAYGDEVVIRVRVGDEEMRTIVGPFRENIRDEL
Ga0137397_1132064523300012685Vadose Zone SoilLTADEICLTLPADDAFHGVAHLVLGGLAARLNLSFETLEDLELALDALLERPSDGREVTVRVLVEDGELRTTVGPFAAVRAE
Ga0137359_1171033813300012923Vadose Zone SoilVIADEICLTLPADEAFHSVAHLVLGGLAARLNLSFEHLEDLELALDSLLERPSDGREVTLRAVVEDRVLRTIVGPFS
Ga0137407_1052442413300012930Vadose Zone SoilVIADEIRLTLPADDAFYGVAHLVLGGLAARLNLTFENLEDLELALDSLLEGRNDGGEVTLRVLVEDGELRMIIGPFTTVRAELEEGA
Ga0164300_1091051923300012951SoilMSGDQIELTLPGDEAFHGVAHLVLGGLAVRQNLSFESLEDLELALDALLERVQGDDGVMLQMRILDGELHTKVGPFADVRAELEQGDAGALNLSRILS
Ga0164298_1017520923300012955SoilMSGDQIELTLPGDEAFHGVAHLVLGGLAVRQNLSFESLEDLELALDALLERVQGDDGVMLQMRILDGELHTKVG
Ga0164298_1068375823300012955SoilLVADEICLTLPADDAFYSVAHLVLGGLAARLNVSYEHLEDLELALDALLERQNDGGEVTLRVIVEDGELRTIVGPFTAVRAELEEGGTTSLNLSRILGAVC
Ga0164302_1167396113300012961SoilLSGDEIQLTLPADEAFHRVAHLVLGGLAVRLNLSFESLEDLELALDALLERAQTADEVTLRVHVLDGELRTVVGPFASVRAELGQGGD
Ga0134078_1027431313300014157Grasslands SoilLSGDEIQLMLPADEAFHRVAHLVMGGLAVRLNLTFESLEDLELALDALLQRTQSDDGVTLRVRVLDGELQTVVGPFAAVRAEL
Ga0157379_1165390223300014968Switchgrass RhizosphereLTDDEIRLTLPADDAFHSVAHLVLGGLAARLNLSFENLEDLELALDALLERPNDGHEVTFHVLVDDGELRMVVGPFTSVRAELGEGGANSLNLGRILDAVSDSV
Ga0173480_1118533023300015200SoilLSGDEIQLTLPADDAFHHVAHLVLGGLAARLNLSVESLEDLELALDALLEHAQTDDGVTLRVRVLDGELRTVVGPFASVRSELEQGDADAL
Ga0134072_1021546423300015357Grasslands SoilLSGDEISLTLPADEAFHRVAHLVLGGLAVRLDLTFEHIEDLEIALDALLERPLTDEALTLRVRMLDVELRTTVGPFAALRTELERGGVDSL
Ga0134112_1052141813300017656Grasslands SoilLSGDEISLTLPADEAFHRVAHLVLGGLAVRLDLTFEHLEDLELALDALLQRKSGEGETTLRVQVLDGELRTTVGPFAAV
Ga0134083_1041255023300017659Grasslands SoilMDEISLTLPADEAFHRVAHLVVGGLAARLDLTFETLEDLELALDALLERLEDAGEVELRVRVHEGGLRTIVGPFRSVRAELEQTGDDSLGLSRILETVCDRVEI
Ga0184605_1033452113300018027Groundwater SedimentLIADEICLTLPADDAFHGVAHLVLGGLAARLNLSFEKLEDLELALDALLERPNDGREVTLRVFVDDSELRTIVGPF
Ga0184621_1003191413300018054Groundwater SedimentLSVDEICLTLPADDAFHGVAHLVVGGLAVRLDLTFEHLEDLELALDTLLDRPSAGDELTVRVLVADGELRTIVGPFTSLRAEYEQ
Ga0184617_105426913300018066Groundwater SedimentLSVDEICLTLPADDAFHGVAHLVVGGLAVRLDLTFEHLEDLELALDTLLDRPSAGDELTVRVLVADGELRTIVGPFTSLRAEYEQAGGAEDLNL
Ga0184609_1049876313300018076Groundwater SedimentLTADEICLTLPADDAFHGVAHLVLGGLAARLNLSFETLEDLELALDTLLERPSDGREMTVRVLVEDGELR
Ga0066669_1009026013300018482Grasslands SoilVSGDEIQLTLPADDAFHHVAHLVLGGLAARLNISVESLEDLELALDALLERAQTDDGVTLRVRVLDGELHTVVGPFASVRSELEQGDADALNL
Ga0173482_1043049423300019361SoilLSGDEIQLTLPADDAFHHVAHLVLGGLAARLNLSVESLEDLELALDALLEHAQTDDGVTLRVRVLDGELRTVVGPFASVRSELEQ
Ga0193732_103600123300020012SoilLTADEICLTLPADDAFHGVAHLVLGGLAARLNLSFETLEDLELALDALLERPNDGREVTVRVFVEDGELRTIVGPFTSVRADLEEDGT
Ga0193734_104137813300020015SoilLSVDEICLTLPADDAFHGVAHLVLGGLAVRLDLTFEYLEDLELALDALLDRPSAGDELTVRVLVADGELRTIVGPFTSLRAEYEDVG
Ga0193733_113336713300020022SoilLSVDEICLTLPADDAFHGVAHLVVGGLAVRLDLTFEHLEDLELALDTLLDRPSAGDELTVRVLVADGELRTIVGPFTSLRAD
Ga0210378_1004700423300021073Groundwater SedimentLSVDEICLTLPADDAFHGVAHLVVGGLAVRLDLTFEHLEDLELALDTLLDRPSAGDELTVRVLVADGELRTIVGPFTSLRAEYEQAGGAEDLNLH
Ga0210382_1040825513300021080Groundwater SedimentLFVLPKGPDWRDTLTADEICLTLPADDAFHGVAHLVLGGLAARLNVSFETLEDLELALDALLESPNDGREVTVRVLVEDRELRTIVGPFTSVRAELGEGG
Ga0222624_156209413300021951Groundwater SedimentLTVDEICLTLPADDAFHGVAHLVLGGLAARLNLSFETLEDLELALDALLERPSDGREVTVRVLVEDGELRTTVGPFTAVRAELGEGG
Ga0222623_1034026713300022694Groundwater SedimentLTADEICLTLPADDAFHGVAHLVLGGLAARLNLSFETLEDLELALDTLLERPSDGREMTVRVLVEDGELRTIVGPFTAVRAELGE
Ga0207692_1107650923300025898Corn, Switchgrass And Miscanthus RhizosphereLSGDEIQLTLPADEAFHGVAHLVLGGLAVRLNLTFENLEDLELALDALLERAQTDNGVSLRVRLLDGELQTTVGPFSSVRAELEDGGGDALTLSRILGA
Ga0207687_1093395513300025927Miscanthus RhizosphereMDELRVDEITLTLPADDAFRRVAHLVLGGLAVRLDLTYESLEDLELALDTLLERTPDEEDVTVLV
Ga0207670_1011456613300025936Switchgrass RhizosphereLSVDEICLKLPADDAFHGVAHLVLGGLAVRLDLTFEYLEDLELALDALLDRPSAGDELTVRVLVADGELRTIVGPFTSLRAEYEDVGGAQDLNLHRILSAV
Ga0207665_1038153313300025939Corn, Switchgrass And Miscanthus RhizosphereVIADEIRLTLPADDAFYGVAHLVLGGLAARLNLTFENLEDLELALDSLLERRNDGREVTLRVLVEDGELRMIIGPFTAVRAELEEGGVDSLNLNRILGAVC
Ga0207702_1233213413300026078Corn RhizosphereLSGDEIQLRLPADEAFHSVAHLVLGGLAVRLNLTFENLEDLELALDALLERARPDDGVTLRVHVLDGELRTVVGPFTSVRAELEQGGQDALNLARILS
Ga0209804_113488913300026335SoilLSGDEISLTLPDDEAFHRVAHLVVGGLAVRLDLTFEHLEDLELALDALLRRPLTEDVLTLRVQVLDGELRT
Ga0209059_134619923300026527SoilLSGDEISLTLPDDEAFHRVAHLVVGGLAVRLDLTFEHLEDLELALDALLRRPLTEDVLTLRVQVLDGELRTTLG
Ga0209056_1020726323300026538SoilVITDEIRLTLPADDAFDGVAYLVLGGLAARLNLTFENLEDLELALDSLLERRGDGTEVTLRVLVEDGELRMIIGPFTAVRAEFEEGGVDSL
Ga0209156_1047068123300026547SoilVSGDEICLTLPADEAFHGVAHLVLGGLAVRLDLTYEDLQDLELALDALLERSSEDGEVTLLLRVGDG
Ga0209474_1067131623300026550SoilLSGDEISLTLPADEAFHRVAHLVLGGLAVRLDLTFEHIEDLEIALDALLERPLTDEALTLRVRMLDGELRTTVGPFA
Ga0209577_1083076823300026552SoilMSGDEIRLTLPADEAFHGVAHLVLGGLAVRLDLTYEDLQDLELALDTLLERSNEDGDVTLVVHVGNGTVRTVVGPFSS
Ga0209701_1058071423300027862Vadose Zone SoilVTADEIRLTLPADDAFHSVAHLVLGGLAARLNLTFENLEDLELALDALLERPSDGREVTLRVLVEDGELRTIVG
Ga0207428_1123667313300027907Populus RhizosphereVSGDEIQLTLPADDAFHHVAHLVLGGLAARLNLSVESLEDLELALDALLEHAQTDDGVTLRVRVLDGELRTVVGPFASVRSELEQGDADALDLSRILGAVCD
Ga0209857_109150323300027957Groundwater SandLSGDEISLTLPPDEAFHSVAHLVLGGLAVRLDLSYEHLEDLELAVDALLERSEDTRDVTLLVRVLDGELQTVVGPFTSVRNELE
Ga0307322_1000346833300028710SoilLSVDEICLTLPADDAFHGVAHLVLGGLAVRLDLTFEYLEDLELALDALLDRPSAGDELTVRVLVADGELRTIVGPFTSLRAEYEDVGGAEDLNLHRILSGLRCSRDRGS
Ga0307322_1001733023300028710SoilVIADEIRLTLPADDAFHGVAHLVLGGLAARLNLTFENLEDLELALDSLLERPSDGREVTLRVLVEDGELRMIVGP
Ga0307303_1001980823300028713SoilLSVDEICLTLPADDAFHGVAHLVLGGLAVRLDLTFEYLEDLELALDALLDRPSAGDELTVRVLVADGELRTI
Ga0307303_1002029623300028713SoilLTADEICLTLPADDAFHGVAHLVLGGLAARLNLSFETLEDLELALDALLERPNDGREVTVRVFVDDGELRTIVGPFISVRADLEEGGTNS
Ga0307297_1040139513300028754SoilLTADEICLTLPADDAFHGVAHLVLGGLAARLNLSFETLEDLELALDALLERPNDGREVTVRVFVEDGELRTIVGPFASVRADLEEGWTNSLNL
Ga0307316_1027226623300028755SoilLSGDEISLTLPADEAFHRVAHLVLGGFALRQDLTFENLEDLELALDALLERTQGEEPVNVRIRIVDGELRTTVGPFAALRAELDRDGTDALNLSRILAAVC
Ga0307323_1007056923300028787SoilLSGDEISLTLPADEAFHRVAHLVLGGFALRQDLTFENLEDLELALDALLERTQGEEPVNVRIRIVDGELRTTV
Ga0307305_1017317813300028807SoilLTADEICLTLPADDAFHGVAHLVLGGLAARLNLSFETLEDLELALDTLLERPSDGREMTVRVLVEDGELRTIVGPFTAVRAELGEGGTNSLNLGRIL
Ga0307294_1003860913300028810SoilVIADEIRLTLPADDAFHGVAHLVLGGLAARLNLTFENLEDLELALDSLLERPSDGREVTLRVLVEDGELRMIVGPFTAVRAELGEGGADSLNLGRILDAVCDSV
Ga0307294_1027025513300028810SoilLSGDEISLTLPADEAFHRVAHLVLGGFALRLDLTFENLEDLELALDALLERTQGEEPVNVRIRIVDGELRTTVGPFAALRAELD
Ga0307292_1013227213300028811SoilVVADEICLTLPADDAFHGVAHLVLGGLAARLNLSFEHLEDLELALDSLLERPSDGREVTLRVIVEDHMLRTIVGPFSSVRAELEEGGTTSLNLGRILRAV
Ga0307302_1023976123300028814SoilMSGDEISLTLPADDAFHSVAHLVLGGLAVRLDLTFENLEDLELAIDALLEHSTQGTNVTMLVRVLDGE
Ga0307302_1057717313300028814SoilLTADEICLTLPADDAFHGVAHLVLGGLAARLNLSFETLEDLELALDTLLERPNDGREMTVRVLVEDGELRTIVGPF
Ga0307310_1003005713300028824SoilMSGDEISLTLPADEAFHPVAHLVLGGLAVRLDLTFESLEDLELAIDALLERFGAGQGVTLLVRVLDGGL
Ga0307312_1040461113300028828SoilLTADEICLTLPADDAFHGVAHLVLGGLAARLNLSFETLEDLELALDTLLERPSDGREMTVRVLVEDGELRTIIGPFTAVRAELGEG
Ga0307278_1035544423300028878SoilMSGDEISLTLPADDAFHSVAHLVLGGLAVRLDLTFENLEDLELAIDALLEHSTQGTNVTMLVRVLDGELQTIVGPFEAVRSE
Ga0307278_1047586313300028878SoilVIADEICLTLPADDAFHGVAHLVLGGLAARLNLTFENLEDLELALDSLLERPSDGREVTLRVLVADSELRMVVGPFAAVRAEFEEGG
Ga0307300_1007796023300028880SoilLSGDEISLTLPADEAFHRVAHLVLGGFALRLDLTFENLEDLELALDALLERTQGEGPVNVRVRIVDGE
Ga0307277_1027991713300028881SoilLSVDEICLTLPADDAFHGVAHLVLGGLAVRLDLTFEYLEDLELALDALLDRPSAGDELTVRVLVAD
Ga0307495_1014603823300031199SoilLTADEICLTLPADDAFHGVAHLVLGGLAARLNLSFETLEDLELALDTLLERPSDGREMTVRVLVEDGELRTIVGPFTAVRAELGEGGTNSLNLG
Ga0308194_1025532313300031421SoilLSGDEISLTLPADEAFHRVAHLVLGGFALRLDLTFENLEDLELALDALLERTQGEGPVNVRVRIVDGELQTT
Ga0310813_1164715023300031716SoilLSGDEIQLRLPADEAFHSVAHLVLGGLAVRLNLTFENLEDLELALDALLERARPDDGVTLRVHVLDGELRT

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.