Metagenome / Metatranscriptome Family F079155

Basic Information
Family ID	F079155
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	41 residues
Representative Sequence	MRDPEIIETELMEISAIADDSIKLERIIAWCASHPDEVPF
Number of Associated Samples	106
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	68.10 %
% of genes near scaffold ends (potentially truncated)	93.10 %
% of genes from short scaffolds (< 2000 bps)	90.52 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Most Common Taxonomy
Group	Bacteria (81.897 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (9.483 % of family members)
Environment Ontology (ENVO)	Unclassified (22.414 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (35.345 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.65% β-sheet: 0.00% Coil/Unstructured: 57.35%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
a.102.3.2: Hyaluronate lyase-like catalytic, N-terminal domain	d1hn0a1	1hn0	0.74215
a.24.15.0: automated matches	d3gwla1	3gwl	0.71471
a.253.1.1: AF0941-like	d1yoza1	1yoz	0.70158
d.64.2.1: TM1457-like	d2idla1	2idl	0.69585
c.56.5.4: Bacterial dinuclear zinc exopeptidases	d1cg2a1	1cg2	0.69235

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF06283	ThuA	4.31
PF02687	FtsX	3.45
PF01546	Peptidase_M20	2.59
PF12543	DUF3738	2.59
PF02543	Carbam_trans_N	2.59
PF01436	NHL	1.72
PF04226	Transgly_assoc	1.72
PF01431	Peptidase_M13	1.72
PF00271	Helicase_C	1.72
PF06532	NrsF	1.72
PF13378	MR_MLE_C	1.72
PF00756	Esterase	0.86
PF01804	Penicil_amidase	0.86
PF00873	ACR_tran	0.86
PF02852	Pyr_redox_dim	0.86
PF00581	Rhodanese	0.86
PF03551	PadR	0.86
PF01177	Asp_Glu_race	0.86
PF02652	Lactate_perm	0.86
PF01156	IU_nuc_hydro	0.86
PF13620	CarboxypepD_reg	0.86
PF00135	COesterase	0.86
PF01165	Ribosomal_S21	0.86
PF01609	DDE_Tnp_1	0.86
PF00665	rve	0.86
PF01828	Peptidase_A4	0.86
PF13360	PQQ_2	0.86
PF11154	DUF2934	0.86
PF01180	DHO_dh	0.86
PF06974	WS_DGAT_C	0.86
PF01566	Nramp	0.86
PF08668	HDOD	0.86
PF13420	Acetyltransf_4	0.86
PF04008	Adenosine_kin	0.86
PF03328	HpcH_HpaI	0.86
PF08448	PAS_4	0.86
PF07589	PEP-CTERM	0.86
PF01022	HTH_5	0.86
PF02881	SRP54_N	0.86
PF00753	Lactamase_B	0.86
PF12704	MacB_PCD	0.86
PF08241	Methyltransf_11	0.86
PF00771	FHIPEP	0.86
PF01977	UbiD	0.86
PF12697	Abhydrolase_6	0.86
PF03306	AAL_decarboxy	0.86
PF10502	Peptidase_S26	0.86
PF13007	LZ_Tnp_IS66	0.86
PF13442	Cytochrome_CBB3	0.86
PF00326	Peptidase_S9	0.86
PF06439	3keto-disac_hyd	0.86
PF02515	CoA_transf_3	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG4813	Trehalose utilization protein	Carbohydrate transport and metabolism [G]	4.31
COG2192	Predicted carbamoyl transferase, NodU family	General function prediction only [R]	2.59
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	1.72
COG3590	Predicted metalloendopeptidase	Posttranslational modification, protein turnover, chaperones [O]	1.72
COG4944	Uncharacterized conserved protein	Function unknown [S]	1.72
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.86
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	0.86
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.86
COG0167	Dihydroorotate dehydrogenase	Nucleotide transport and metabolism [F]	0.86
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	0.86
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	0.86
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.86
COG1620	L-lactate permease	Energy production and conversion [C]	0.86
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.86
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.86
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.86
COG1839	Adenosine/AMP kinase	Nucleotide transport and metabolism [F]	0.86
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.86
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	0.86
COG1957	Inosine-uridine nucleoside N-ribohydrolase	Nucleotide transport and metabolism [F]	0.86
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.86
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	0.86
COG2301	Citrate lyase beta subunit	Carbohydrate transport and metabolism [G]	0.86
COG2366	Acyl-homoserine lactone (AHL) acylase PvdQ	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.86
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.86
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.86
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.86
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.86
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.86
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.86
COG3527	Alpha-acetolactate decarboxylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.86
COG3836	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	Carbohydrate transport and metabolism [G]	0.86
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.86
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.86
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.86
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.62 %
Unclassified	root	N/A	16.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.62 %
Unclassified	root	N/A	16.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.90 %
Unclassified	root	N/A	16.38 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	58.62 %
Unclassified	root	N/A	16.38 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	1.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.86 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.86 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.86 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	42.24 %
Unclassified	root	N/A	16.38 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.31 %
Candidatus Micrarchaeota	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Micrarchaeota	1.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.86 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.86 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.86 %

Name	Rank	Taxonomy	Distribution
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	36.21 %
Unclassified	root	N/A	16.38 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.31 %
unclassified Candidatus Micrarchaeota	no rank	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Micrarchaeota → unclassified Candidatus Micrarchaeota	1.72 %
Candidatus Brocadiia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia	0.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.86 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	19.83 %
Unclassified	root	N/A	16.38 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	11.21 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.31 %
Candidatus Micrarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Micrarchaeota → unclassified Candidatus Micrarchaeota → Candidatus Micrarchaeota archaeon	1.72 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	1.72 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.86 %
Candidatus Brocadiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales	0.86 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Paludibaculum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum	18.97 %
Unclassified	root	N/A	16.38 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	6.03 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	4.31 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.31 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1.72 %
Acidisarcina	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina	1.72 %
Candidatus Micrarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Micrarchaeota → unclassified Candidatus Micrarchaeota → Candidatus Micrarchaeota archaeon	1.72 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.86 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.86 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	0.86 %
Candidatus Scalinduaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Scalinduaceae	0.86 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Paludibaculum fermentans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	18.97 %
Unclassified	root	N/A	16.38 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	5.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.31 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	3.45 %
Acidisarcina polymorpha	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1.72 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1.72 %
Candidatus Micrarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Micrarchaeota → unclassified Candidatus Micrarchaeota → Candidatus Micrarchaeota archaeon	1.72 %
Granulicella sibirica	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella sibirica	0.86 %
unclassified Geodermatophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae	0.86 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.86 %
Candidatus Scalindua	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Scalinduaceae → Candidatus Scalindua	0.86 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Paludibaculum fermentans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	18.97 %
Unclassified	root	N/A	16.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.31 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	3.45 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1.72 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	1.72 %
Acidisarcina polymorpha	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1.72 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1.72 %
Candidatus Micrarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Micrarchaeota → unclassified Candidatus Micrarchaeota → Candidatus Micrarchaeota archaeon	1.72 %
Candidatus Scalindua rubra	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Scalinduaceae → Candidatus Scalindua → Candidatus Scalindua rubra	0.86 %
Geodermatophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	0.86 %
Granulicella sibirica	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella sibirica	0.86 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.86 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_102704478	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1267	Open in IMG/M
3300002568\|C688J35102_118760460	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	593	Open in IMG/M
3300004631\|Ga0058899_11836654	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	770	Open in IMG/M
3300005332\|Ga0066388_106819462	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M
3300005367\|Ga0070667_100882007	Not Available	832	Open in IMG/M
3300005435\|Ga0070714_101085224	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300005436\|Ga0070713_101945631	All Organisms → cellular organisms → Bacteria → Acidobacteria	570	Open in IMG/M
3300005531\|Ga0070738_10287873	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	694	Open in IMG/M
3300005534\|Ga0070735_10586035	Not Available	662	Open in IMG/M
3300005541\|Ga0070733_10660723	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	701	Open in IMG/M
3300005840\|Ga0068870_10677457	All Organisms → cellular organisms → Bacteria → Acidobacteria	709	Open in IMG/M
3300006028\|Ga0070717_11234100	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300006028\|Ga0070717_11463503	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300006052\|Ga0075029_100935965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300006162\|Ga0075030_100148936	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1894	Open in IMG/M
3300006172\|Ga0075018_10558528	Not Available	604	Open in IMG/M
3300006237\|Ga0097621_101091063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	749	Open in IMG/M
3300006358\|Ga0068871_102078520	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	541	Open in IMG/M
3300006852\|Ga0075433_11256371	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	642	Open in IMG/M
3300009098\|Ga0105245_10296069	All Organisms → cellular organisms → Bacteria	1586	Open in IMG/M
3300009177\|Ga0105248_10218534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	2146	Open in IMG/M
3300009177\|Ga0105248_11406743	All Organisms → cellular organisms → Bacteria → Acidobacteria	789	Open in IMG/M
3300009630\|Ga0116114_1021460	All Organisms → cellular organisms → Bacteria	1947	Open in IMG/M
3300009636\|Ga0116112_1235706	Not Available	504	Open in IMG/M
3300009698\|Ga0116216_10916301	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	524	Open in IMG/M
3300009700\|Ga0116217_10636224	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	663	Open in IMG/M
3300010379\|Ga0136449_100574696	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	1930	Open in IMG/M
3300011269\|Ga0137392_10819593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	768	Open in IMG/M
3300012210\|Ga0137378_11091888	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	712	Open in IMG/M
3300012359\|Ga0137385_10164820	Not Available	1946	Open in IMG/M
3300012960\|Ga0164301_11319384	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	586	Open in IMG/M
3300012971\|Ga0126369_10090977	All Organisms → cellular organisms → Bacteria	2736	Open in IMG/M
3300013306\|Ga0163162_12147979	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	641	Open in IMG/M
3300014158\|Ga0181521_10626060	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	501	Open in IMG/M
3300014167\|Ga0181528_10468848	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300014489\|Ga0182018_10590229	Not Available	583	Open in IMG/M
3300014490\|Ga0182010_10052092	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1953	Open in IMG/M
3300014492\|Ga0182013_10289360	All Organisms → cellular organisms → Bacteria → Acidobacteria	925	Open in IMG/M
3300014493\|Ga0182016_10228434	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	1180	Open in IMG/M
3300014494\|Ga0182017_10304568	All Organisms → cellular organisms → Bacteria → Acidobacteria	998	Open in IMG/M
3300014496\|Ga0182011_10774953	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300014498\|Ga0182019_10126287	Not Available	1596	Open in IMG/M
3300014499\|Ga0182012_10910724	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	554	Open in IMG/M
3300014502\|Ga0182021_13411567	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	529	Open in IMG/M
3300014838\|Ga0182030_10455489	Not Available	1301	Open in IMG/M
3300014839\|Ga0182027_10233646	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2112	Open in IMG/M
3300014839\|Ga0182027_10876214	Not Available	932	Open in IMG/M
3300014839\|Ga0182027_10988244	Not Available	863	Open in IMG/M
3300015374\|Ga0132255_104174290	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	613	Open in IMG/M
3300016371\|Ga0182034_10741654	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	837	Open in IMG/M
3300017935\|Ga0187848_10343846	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	618	Open in IMG/M
3300017988\|Ga0181520_10198894	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	1577	Open in IMG/M
3300017988\|Ga0181520_10924559	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300018005\|Ga0187878_1336769	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Scalinduaceae → Candidatus Scalindua → Candidatus Scalindua rubra	535	Open in IMG/M
3300018008\|Ga0187888_1278975	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300018019\|Ga0187874_10361761	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	587	Open in IMG/M
3300018026\|Ga0187857_10101092	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Micrarchaeota → unclassified Candidatus Micrarchaeota → Candidatus Micrarchaeota archaeon	1403	Open in IMG/M
3300018034\|Ga0187863_10463637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	708	Open in IMG/M
3300018083\|Ga0184628_10147023	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1226	Open in IMG/M
3300019787\|Ga0182031_1283902	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1772	Open in IMG/M
3300019788\|Ga0182028_1352796	All Organisms → cellular organisms → Bacteria	1596	Open in IMG/M
3300019788\|Ga0182028_1365491	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	2357	Open in IMG/M
3300021171\|Ga0210405_11173610	Not Available	570	Open in IMG/M
3300021377\|Ga0213874_10420961	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	523	Open in IMG/M
3300021478\|Ga0210402_10924133	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	799	Open in IMG/M
3300021559\|Ga0210409_11525351	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	544	Open in IMG/M
3300021560\|Ga0126371_13390963	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	538	Open in IMG/M
3300021861\|Ga0213853_10417587	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella sibirica	517	Open in IMG/M
3300023088\|Ga0224555_1199650	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	549	Open in IMG/M
3300023091\|Ga0224559_1077015	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1268	Open in IMG/M
3300025147\|Ga0209511_1156152	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300025473\|Ga0208190_1044628	All Organisms → cellular organisms → Bacteria → Acidobacteria	946	Open in IMG/M
3300025500\|Ga0208686_1088503	Not Available	669	Open in IMG/M
3300025922\|Ga0207646_11635980	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300025927\|Ga0207687_10308196	Not Available	1277	Open in IMG/M
3300025929\|Ga0207664_11977156	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300026035\|Ga0207703_11205001	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	728	Open in IMG/M
3300026088\|Ga0207641_11042307	Not Available	815	Open in IMG/M
3300026281\|Ga0209863_10008744	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3263	Open in IMG/M
3300027854\|Ga0209517_10684580	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	530	Open in IMG/M
3300027867\|Ga0209167_10042513	All Organisms → cellular organisms → Bacteria	2214	Open in IMG/M
3300027911\|Ga0209698_10215567	All Organisms → cellular organisms → Bacteria	1546	Open in IMG/M
3300027986\|Ga0209168_10146982	All Organisms → cellular organisms → Bacteria	1196	Open in IMG/M
3300030041\|Ga0302274_10316405	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	720	Open in IMG/M
3300030580\|Ga0311355_11760027	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300031236\|Ga0302324_102314898	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300031238\|Ga0265332_10150189	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	975	Open in IMG/M
3300031250\|Ga0265331_10360391	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	651	Open in IMG/M
3300031259\|Ga0302187_10120597	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Micrarchaeota → unclassified Candidatus Micrarchaeota → Candidatus Micrarchaeota archaeon	1463	Open in IMG/M
3300031708\|Ga0310686_110918791	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300031716\|Ga0310813_11787066	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	577	Open in IMG/M
3300031765\|Ga0318554_10842452	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	512	Open in IMG/M
3300031821\|Ga0318567_10193362	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	1135	Open in IMG/M
3300031938\|Ga0308175_101624424	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	723	Open in IMG/M
3300031938\|Ga0308175_101756299	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300031938\|Ga0308175_102683901	All Organisms → cellular organisms → Bacteria → Acidobacteria	557	Open in IMG/M
3300031939\|Ga0308174_10188127	Not Available	1566	Open in IMG/M
3300031996\|Ga0308176_10370802	All Organisms → cellular organisms → Bacteria	1419	Open in IMG/M
3300032067\|Ga0318524_10516629	Not Available	627	Open in IMG/M
3300032074\|Ga0308173_10694746	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300032076\|Ga0306924_10111029	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	3110	Open in IMG/M
3300032180\|Ga0307471_100073949	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	2958	Open in IMG/M
3300032770\|Ga0335085_12021046	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	584	Open in IMG/M
3300032782\|Ga0335082_11567268	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300032783\|Ga0335079_10565258	Not Available	1204	Open in IMG/M
3300032805\|Ga0335078_10159331	All Organisms → cellular organisms → Bacteria	3182	Open in IMG/M
3300032805\|Ga0335078_11736359	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300032895\|Ga0335074_11077671	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300032897\|Ga0335071_11634004	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300032897\|Ga0335071_12155645	Not Available	500	Open in IMG/M
3300032954\|Ga0335083_10079929	Not Available	3300	Open in IMG/M
3300033158\|Ga0335077_10053150	All Organisms → cellular organisms → Bacteria	4917	Open in IMG/M
3300033402\|Ga0326728_10391498	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	1194	Open in IMG/M
3300033513\|Ga0316628_102258581	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300033891\|Ga0334811_139611	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	603	Open in IMG/M
3300034965\|Ga0370497_0169754	All Organisms → cellular organisms → Bacteria → Acidobacteria	554	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.21%
Host-Associated	Host-Associated	13.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.24%
Aquatic	Environmental → Aquatic	18.97%
Plants	Host-Associated → Plants	13.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.34%
Freshwater	Environmental → Aquatic → Freshwater	13.79%
Peat	Environmental → Terrestrial → Peat	6.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.90%
Sediment	Environmental → Aquatic → Sediment	4.31%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.31%
Roots	Host-Associated → Plants → Roots	2.59%
Marine	Environmental → Aquatic → Marine	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	27.59%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	25.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.07%
Loam	Environmental → Terrestrial → Soil → Loam	7.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.31%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.45%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.59%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.72%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.86%
Ice	Environmental → Aquatic → Freshwater → Ice	0.86%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.66%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	14.66%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.34%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.90%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.31%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.72%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.72%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.86%
Glacier	Environmental → Aquatic → Freshwater → Ice → Glacier	0.86%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.86%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	9.48%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	8.62%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.17%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.31%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	4.31%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.45%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.45%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.45%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.59%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.59%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.72%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.72%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.72%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.86%
Glacier Valley	Environmental → Aquatic → Freshwater → Ice → Glacier → Glacier Valley	0.86%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.86%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.86%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.86%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.86%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.86%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.86%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.86%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.86%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.86%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009636	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental	Open in IMG/M
3300023091	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 30-34	Environmental	Open in IMG/M
3300025147	Glacier valley bacterial and archeal communities from Borup Fiord, Nunavut, Canada, to study Microbial Dark Matter (Phase II) - ?SSSS metaG (SPAdes)	Environmental	Open in IMG/M
3300025473	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10 (SPAdes)	Environmental	Open in IMG/M
3300025500	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300030041	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_1	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031238	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG	Host-Associated	Open in IMG/M
3300031250	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG	Host-Associated	Open in IMG/M
3300031259	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033891	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-1-D	Environmental	Open in IMG/M
3300034965	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_04D_17	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079155

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1027044782	3300001213	Wetland	MRDPEIIETELMEISAIADDTLKFERIIAWCASHPDEVPFALHQL
C688J35102_1187604602	3300002568	Soil	MRDPETIETELMEISAIADDTVKFERIIAWCATHPDEVPFA
Ga0058899_118366543	3300004631	Forest Soil	MRDREIIETELMEISAIADDAVKFERIVAWCAARPDEVPFALHQLL
Ga0066388_1068194621	3300005332	Tropical Forest Soil	VCHPGVSMRDAEIIETELMEISAIPEDAVKLERIIAWCATHPDEVPFAL
Ga0070667_1008820072	3300005367	Switchgrass Rhizosphere	MRDPQVIEAELVEIGAISDDSLKLERIIAWCATYPDEVPFAIRLLLDR*
Ga0070714_1010852242	3300005435	Agricultural Soil	MRDPETIETELMEISAIADDGVKLERIIAWCATHPDEVPFALHQ
Ga0070713_1019456311	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MLVFLMRDPETIETELMEISAIAEDTVKFERIVAWCVAHPDEIPFAL
Ga0070738_102878731	3300005531	Surface Soil	MRDPETIETDLMDIAAIADEGVKLERIIAWCAVHPDEIP
Ga0070735_105860351	3300005534	Surface Soil	MREPETIENELIEIGAIPDDLVKFERIVAWCAAHPDEVP
Ga0070733_106607231	3300005541	Surface Soil	MCHARVSMRDPEIIETELMEIGAVADDAVKLERIIAWCASHPDEVPFA
Ga0068870_106774571	3300005840	Miscanthus Rhizosphere	MLVCMRDPETIDTELMEISAITDDVLKLERIIAWCATHPDEVPFALHQF
Ga0070717_112341001	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VRRDEQIVEAELMEISAIQDDTIKLERIVAWCANYPDEIPF
Ga0070717_114635032	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRDPETIETELMEISSIADDLVKFERIIAWCASHP
Ga0075029_1009359651	3300006052	Watersheds	MRDLEIIETELMEISAIADDTIKLERIIAWCASHPDEVPFALHQL
Ga0075030_1001489363	3300006162	Watersheds	MRDLDTVESELFEISAIPEDGLKLERIIAWCATHPDEVPMAIHLLLVRRNAETPKE*
Ga0075018_105585281	3300006172	Watersheds	MRDLAVIEAELSEISAIQDDTLKLERIVAWSAAHPHEVPLALRFF
Ga0097621_1010910632	3300006237	Miscanthus Rhizosphere	MWHASSMRDPAVIEAELIEISAIADDTLKLERIIAWCATHPDE
Ga0068871_1020785201	3300006358	Miscanthus Rhizosphere	MRDPEVIEAELMEISGTADDTIKLERIIAWCASHPDEVP
Ga0075433_112563711	3300006852	Populus Rhizosphere	MRDAEIIETELMEISAIADDTVKFERIIAWCATHPDE
Ga0105245_102960693	3300009098	Miscanthus Rhizosphere	MRDLQVIEAELVEIGAISDDSLKLERIIAWCATYPDEVPFAIRLLLDR*
Ga0105248_102185343	3300009177	Switchgrass Rhizosphere	MRDPEIIETELMEISAIPDDLVKLERIIAWCASHPDEV
Ga0105248_114067432	3300009177	Switchgrass Rhizosphere	MLVCMRDPETIDTELMEISAITDDVLKLERIIAWCATHPD
Ga0116114_10214601	3300009630	Peatland	MRAPEVIETELMEISAIAEDTDKLERTIAWCATHPDEVPFALHQLL
Ga0116112_12357062	3300009636	Peatland	MRDPETIETELMEISAIAGDAVKLERIIAWCACHPDEVPF
Ga0116216_109163011	3300009698	Peatlands Soil	MRDPEIIETELMEISAIADDTLKFERIIAWCASHPD
Ga0116217_106362241	3300009700	Peatlands Soil	MRDSETIETELMEISAIADESIKLERIIAWCASHPDEVPFA
Ga0136449_1005746966	3300010379	Peatlands Soil	MRDPEIIETELMEISAIADDTLKFERIIAWCASHPDEVPFALHQF
Ga0137392_108195932	3300011269	Vadose Zone Soil	MRDPEIIENELMEISAIADDTIKLERIIAWCAAHPDEVPFALHHL
Ga0137378_110918881	3300012210	Vadose Zone Soil	MRDPEIIEAELIEISAMADDTLKLERIIAWCASHPDEVPFALHQLR
Ga0137385_101648202	3300012359	Vadose Zone Soil	MRDPEVIESELIEISAIADDTLKLERIIAWCASHPDEIPFA
Ga0164301_113193842	3300012960	Soil	MRDPEIIETELMEISAIADDTVKFERIIAWCAAHPDE
Ga0126369_100909773	3300012971	Tropical Forest Soil	MRDPAEIEKELMEISAIAEDGTKLEWIIAWCANHPDEVPFALKILMSRS*
Ga0163162_121479791	3300013306	Switchgrass Rhizosphere	MRDPEVIEAELMEISGTADDTIKLERIIAWCASHPD
Ga0181521_106260601	3300014158	Bog	MRDPETIETELMEISAIAEDTVKFERIVAWCATHPDEVPF
Ga0181528_104688483	3300014167	Bog	MRDSEIIETELMEIGAIPDDALKLERIISWCAMHPEEVPFALHQLLG
Ga0182018_105902292	3300014489	Palsa	MREPEQIEEELFEIAGMADDGTKLEQIIAWCATHPD
Ga0182010_100520921	3300014490	Fen	MRDADIIETELTEISAIADDTLRFERIIVWCASNPDDVPFA
Ga0182013_102893601	3300014492	Bog	MRDPETIETELMEIGAIADDTLKLERIIAWCASHPDEVPFALHQ
Ga0182016_102284341	3300014493	Bog	MRDLEIIEAELMEISAIADDSIKLERIIAWCASHPDEVP
Ga0182017_103045684	3300014494	Fen	MRDAETIETELMEISAIADDSVKLERIIAWCACYP
Ga0182011_107749532	3300014496	Fen	MRDPETIETELMEISAIADDAVKLERIIAWCSCHPD
Ga0182019_101262872	3300014498	Fen	MRDPEVIETELMEISAIADDSVKFERIVAWCATHPDEVPF
Ga0182012_109107242	3300014499	Bog	MRDPEIIETELMEISAIPDDTLKFERIIAWCASHPDEVPF
Ga0182021_134115672	3300014502	Fen	MRDLEIIEAELMEISAIADDSVKLERIIAWCASHP
Ga0182030_104554893	3300014838	Bog	MRDPETIEQELVGIGAIADDSTKLERIIAWCASHPD
Ga0182027_102336461	3300014839	Fen	MRDPESIETELMEISAIADDSVKFERIVVWCATHPDEVPFALHQLL
Ga0182027_108762142	3300014839	Fen	MRDPETIETELMEISAIADDAVKLERIIAWCSCHPDEVPFALHQLMN
Ga0182027_109882441	3300014839	Fen	MRDPETIETELMEISAIADDAVKLERIIAWCACHPDEVPFAL
Ga0132255_1041742901	3300015374	Arabidopsis Rhizosphere	MRDPEIIETDLMEISAIADDLVKFERIVAWCASHPDEVPF
Ga0182034_107416541	3300016371	Soil	VCHADFMRDPEIIDTELMEISAITDDVVKLERIIAWCASHPDEVPF
Ga0187848_103438461	3300017935	Peatland	MRDSEIIETELMEISAIAEDTVKFERIVAWCATHPDEVPFALHQ
Ga0181520_101988941	3300017988	Bog	MRDPEIIEAELMEISAIADDSIRFERIVAWCATYPDEVPFALHQWM
Ga0181520_109245592	3300017988	Bog	MRDPESIETELMEISAIADESIKLERIIAWCASYPDEVLFAL
Ga0187878_13367692	3300018005	Peatland	MRDPEIIETELMEISAIAEDTVKFERIVAWCATHPDEVP
Ga0187888_12789751	3300018008	Peatland	MRDSEIIETELMEISAIAEDTVKFERIVAWCATHPDEVPFAL
Ga0187874_103617611	3300018019	Peatland	MRDPEIIETELMEISAIAEDTTKFERIIAWCATHPDEVPFVLHQFM
Ga0187857_101010922	3300018026	Peatland	MRDPEIIETELMEISAIAEDTVKFERIVAWCATHPDEV
Ga0187863_104636371	3300018034	Peatland	MRDPEIIEAELVEISGIADDSVKLERIVTWCATHPDEVPFA
Ga0184628_101470231	3300018083	Groundwater Sediment	MRDPEIIETDLMEISSIADDLVKFERIVAWCASHPDEVPFA
Ga0182031_12839023	3300019787	Bog	MRDLEIIEAELMEISAIADDSIKLERIIAWCASHPDEVPVALH
Ga0182028_13527965	3300019788	Fen	MRDPEAIETELMEISAIADDSVKFERIVAWCATHPDEVPSPCIRSWA
Ga0182028_13654913	3300019788	Fen	MRDLEIIEAELMEISAIADDSIKLERIIAWCASHPTKSPSHCISS
Ga0210405_111736101	3300021171	Soil	MREPETIENELIEIGAIPDDLVKFERIVAWCAAHPDEVPF
Ga0213874_104209611	3300021377	Plant Roots	MRDPEIIEEELVEISAIADDTVKFDRIIAWCAAHPDEV
Ga0210402_109241331	3300021478	Soil	MRDPEVIESELIEISAIADDTLKLERIIAWCTAHPDEIPFALHQ
Ga0210409_115253511	3300021559	Soil	MRDPEIIENELMEISAIADDSLKLERIIAWCATHPNEVP
Ga0126371_133909632	3300021560	Tropical Forest Soil	MRDPETIETELMEISAIPDDLVKLERIVAWCAAHPDEVPF
Ga0213853_104175872	3300021861	Watersheds	MRQPDVIEAELAEISGIAEDETKFERIVAWVATHPD
Ga0224555_11996501	3300023088	Soil	MRDPETIETELMEISSIVDDAVKFERVVTWCATHPDEVPFALHQ
Ga0224559_10770152	3300023091	Soil	MRNPEIIETELMEISAIFDDTVKFERIIAWCASHPDE
Ga0209511_11561522	3300025147	Glacier Valley	MRDAEAIESELLEISAIPDDSNKLERIITWCATHPD
Ga0208190_10446282	3300025473	Peatland	MRDPEIIETELMEIGAIADDTLKLERIIAWCASHPD
Ga0208686_10885031	3300025500	Peatland	MRDPETIETELMEISAIADDAVKLERIIAWCACHPD
Ga0207646_116359802	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRDPEIIEAELVEISAIADDTIKFERIIAWCAAHPDEVAFALHQL
Ga0207687_103081961	3300025927	Miscanthus Rhizosphere	MRDLQVIEAELVEIGAISDDSLKLERIIAWCATYPDEVPFAIRLLLDR
Ga0207664_119771562	3300025929	Agricultural Soil	MRDPEIIEAELIEISAIADDSLKFERIVAWCTAHPDE
Ga0207703_112050012	3300026035	Switchgrass Rhizosphere	MLVFMRDTEIIETDLMEISAIADDSTKFERILAWCAAHPDEIP
Ga0207641_110423072	3300026088	Switchgrass Rhizosphere	MRDPQVIEAELVEIGAISDDSLKLERIIAWCATYPDEVPFAIRLLL
Ga0209863_100087441	3300026281	Prmafrost Soil	MRDPEIIETELMEISAIADDTVKLERIIAWCASHPDEVPFALHQLMG
Ga0209517_106845801	3300027854	Peatlands Soil	MGAPEIIETELMEISALAEDTVKFERIVAWCATHPDEVPFALHQL
Ga0209167_100425133	3300027867	Surface Soil	VCHAEVSMRDPEIIETELMEISAIADDTIKFERIIAWCASHPDEVPFA
Ga0209698_102155672	3300027911	Watersheds	MRDLDTVESELFEISAIPEDGLKLERIIAWCATHPDEVPMAIHLLLVRRNAETPKE
Ga0209168_101469821	3300027986	Surface Soil	MRDAEIIEAELMEISAIVDDTVKLERIIAWCASYPDEV
Ga0302274_103164051	3300030041	Bog	MRDLEIIEAELMEISAIADDSVKLERIIAWCASHPDE
Ga0311355_117600272	3300030580	Palsa	MRNPEVIEAELMEISAIADDSTKLERIVTWCATHPDEVPF
Ga0302324_1023148982	3300031236	Palsa	MRDSETIETELMEISAVADDTLKLERIIAWCASHPDEVPFALHQI
Ga0265332_101501892	3300031238	Rhizosphere	MRDPEIIETELMEISAIADDAVKLERIVAWCAMRPDEV
Ga0265331_103603911	3300031250	Rhizosphere	MRAPEIIETELMEISAIAEDTVKFERIVVWCATHP
Ga0302187_101205972	3300031259	Bog	MRDPEIIETELMEISAIAEDTVKFERIVAWCATHPDEVPF
Ga0310686_1109187911	3300031708	Soil	MRDPETIETELMSISAIADDSTKLERIIAWCATHPDEVPFALH
Ga0310813_117870661	3300031716	Soil	MRDPEVIEAELMEISGTADDTIKLERIIAWCASHPDEVPFALHQLL
Ga0318554_108424522	3300031765	Soil	MRDPETIETELMEISAIADDAVKLERIIAWCAAHPDEVPFA
Ga0318567_101933621	3300031821	Soil	MRDPEIIDTELMEISAITDDVVKLERIIAWCASHPDEVPF
Ga0308175_1016244243	3300031938	Soil	MRDPEVIENELMEISAIADESIKFERIVAWCASHPDEVPF
Ga0308175_1017562991	3300031938	Soil	MCHPKVAMRAPEIIEAELMEIGAIADDTIKLERIIAWCASHPD
Ga0308175_1026839011	3300031938	Soil	MRDPETIETELMEISAITDDVVKLERIIAWCAIHPDEV
Ga0308174_101881271	3300031939	Soil	MRDPEIIETELMEIGSIADDGVKLERLIAWCASHPDEV
Ga0308176_103708022	3300031996	Soil	MRDPEVIEAELMEISGIAEDENKLERIIAWCATHPDEVPFALKI
Ga0318524_105166292	3300032067	Soil	MRDAETIETELVEIAAIPDDLVKLERIITWCAVHPDEVPFAL
Ga0308173_106947462	3300032074	Soil	MRRDQQIVEAELMEISAIQDDSVKLERLVAWCANYPDEILFAL
Ga0306924_101110291	3300032076	Soil	MRDPEIIDTELMEISAIADDGVKLERLIAWCAAHP
Ga0307471_1000739493	3300032180	Hardwood Forest Soil	MRDPEIIEAELTEISAIADDTVKLERIIAWCATHPDEVAFALHQFM
Ga0335085_120210461	3300032770	Soil	MRDPEIIEGELIEISALADDTLKLERIIAWCAAHHDEIPFALHM
Ga0335082_115672681	3300032782	Soil	MRPPEVIEADLMEISAVLDDAVKLERIIAWCAAHPDEVPFAL
Ga0335079_105652581	3300032783	Soil	MRDPETIETELMEISAIADESIKLERIIAWCASHPDEVPFA
Ga0335078_101593311	3300032805	Soil	MRDSEIIETELMEISAIADDSIKLERIIAWCASHPDEVP
Ga0335078_117363592	3300032805	Soil	MRDPQIIDAELMEIAALADDTLKFERLVAWCASHP
Ga0335074_110776712	3300032895	Soil	MRDPQVIEEELIEIGAIADDTIKFERIVAWCATHPDEVPLALHMF
Ga0335071_116340043	3300032897	Soil	MRDPETIEAELMEISAIADDAVKLERIVAWCAWHPDEVPFAL
Ga0335071_121556451	3300032897	Soil	MRDPEIIETELMEISAIADDSIKLERIIAWCASHPDEVPF
Ga0335083_100799291	3300032954	Soil	MRPPEVIEADLMEISAVLDDAVKLERIIAWCAAHPD
Ga0335077_100531503	3300033158	Soil	MRDSEIIETELMEISAIADDSIKLERIIAWCASHPDEVPMPCISS
Ga0326728_103914981	3300033402	Peat Soil	MRDPETIETELMEIGAIAEDAVKLERIIAWCACHPD
Ga0316628_1022585811	3300033513	Soil	MRDPETIEPELMEISSIADDLGKFERVVAWCAAHPDEVPSPC
Ga0334811_139611_2_124	3300033891	Soil	MRDAEIVEAELMEISAIADDSIKFERIVAWCATYPEEVPFA
Ga0370497_0169754_1_123	3300034965	Untreated Peat Soil	MRDPETIDTELMEISAITDDVLKLERIITWCATHPDEVPFA

Hidden Markov Model


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