Metagenome / Metatranscriptome Family F079169

Basic Information
Family ID	F079169
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	40 residues
Representative Sequence	MAKLPGAIQGARVVGERYVRSQRQQNPEGRMPLFDHLR
Number of Associated Samples	104
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	90.52 %
% of genes near scaffold ends (potentially truncated)	95.69 %
% of genes from short scaffolds (< 2000 bps)	96.55 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Most Common Taxonomy
Group	Bacteria (97.414 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (37.931 % of family members)
Environment Ontology (ENVO)	Unclassified (26.724 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (36.207 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.36% β-sheet: 0.00% Coil/Unstructured: 63.64%
Feature Viewer

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Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF02416	TatA_B_E	84.48
PF13280	WYL	5.17
PF00881	Nitroreductase	1.72
PF00106	adh_short	0.86
PF13359	DDE_Tnp_4	0.86
PF13489	Methyltransf_23	0.86
PF13751	DDE_Tnp_1_6	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG1826	Twin-arginine protein secretion pathway components TatA and TatB	Intracellular trafficking, secretion, and vesicular transport [U]	84.48

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.41 %
Unclassified	root	N/A	2.59 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.41 %
Unclassified	root	N/A	2.59 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.41 %
Unclassified	root	N/A	2.59 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	93.97 %
Unclassified	root	N/A	2.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	93.97 %
Unclassified	root	N/A	2.59 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	75.86 %
Unclassified	root	N/A	2.59 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.86 %

Name	Rank	Taxonomy	Distribution
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	56.03 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	4.31 %
Unclassified	root	N/A	2.59 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.72 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.86 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.86 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.86 %

Name	Rank	Taxonomy	Distribution
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	55.17 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	4.31 %
Unclassified	root	N/A	2.59 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.72 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.86 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.86 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.86 %
Sabulicella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sabulicella	0.86 %

Name	Rank	Taxonomy	Distribution
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	55.17 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	4.31 %
Unclassified	root	N/A	2.59 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.72 %
Sabulicella rubraurantiaca	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sabulicella → Sabulicella rubraurantiaca	0.86 %
unclassified Kribbellaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → unclassified Kribbellaceae	0.86 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.86 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.86 %

Name	Rank	Taxonomy	Distribution
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	55.17 %
Unclassified	root	N/A	2.59 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.72 %
Kribbellaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → unclassified Kribbellaceae → Kribbellaceae bacterium	0.86 %
Candidatus Frankia californiensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia californiensis	0.86 %
Streptomyces cellostaticus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces cellostaticus	0.86 %
Sabulicella rubraurantiaca	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sabulicella → Sabulicella rubraurantiaca	0.86 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004081\|Ga0063454_101003318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	672	Open in IMG/M
3300005343\|Ga0070687_100023577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	2926	Open in IMG/M
3300005356\|Ga0070674_100482050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1029	Open in IMG/M
3300005445\|Ga0070708_100518257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1124	Open in IMG/M
3300005455\|Ga0070663_101984114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	524	Open in IMG/M
3300005466\|Ga0070685_10331357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1035	Open in IMG/M
3300005541\|Ga0070733_10662038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	701	Open in IMG/M
3300005548\|Ga0070665_101846618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	610	Open in IMG/M
3300005602\|Ga0070762_11321720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	501	Open in IMG/M
3300005614\|Ga0068856_101252590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sabulicella → Sabulicella rubraurantiaca	757	Open in IMG/M
3300006172\|Ga0075018_10134621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1128	Open in IMG/M
3300006175\|Ga0070712_101613256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	567	Open in IMG/M
3300006861\|Ga0063777_1493079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	501	Open in IMG/M
3300007076\|Ga0075435_100544838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1004	Open in IMG/M
3300007076\|Ga0075435_100780035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	832	Open in IMG/M
3300009148\|Ga0105243_12451698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	560	Open in IMG/M
3300009672\|Ga0116215_1182027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia californiensis	928	Open in IMG/M
3300010146\|Ga0126320_1555167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	558	Open in IMG/M
3300010366\|Ga0126379_11250490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	849	Open in IMG/M
3300010371\|Ga0134125_12256328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	592	Open in IMG/M
3300010376\|Ga0126381_100795531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1357	Open in IMG/M
3300010865\|Ga0126346_1012170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	665	Open in IMG/M
3300010880\|Ga0126350_10330568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1142	Open in IMG/M
3300011120\|Ga0150983_13300330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	656	Open in IMG/M
3300012203\|Ga0137399_11598472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → unclassified Kribbellaceae → Kribbellaceae bacterium	540	Open in IMG/M
3300012208\|Ga0137376_11101075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	679	Open in IMG/M
3300012359\|Ga0137385_10632919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	897	Open in IMG/M
3300012685\|Ga0137397_10731382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	735	Open in IMG/M
3300012924\|Ga0137413_11840136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	501	Open in IMG/M
3300012944\|Ga0137410_11233946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	645	Open in IMG/M
3300012957\|Ga0164303_10525524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	763	Open in IMG/M
3300012960\|Ga0164301_10383695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	977	Open in IMG/M
3300012971\|Ga0126369_11998667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	668	Open in IMG/M
3300013059\|Ga0154012_112406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	525	Open in IMG/M
3300013100\|Ga0157373_10134071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1741	Open in IMG/M
3300013307\|Ga0157372_11980992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	669	Open in IMG/M
3300013308\|Ga0157375_13298257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	538	Open in IMG/M
3300014501\|Ga0182024_12167035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	609	Open in IMG/M
3300016294\|Ga0182041_10611720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	958	Open in IMG/M
3300016357\|Ga0182032_10360834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1165	Open in IMG/M
3300016445\|Ga0182038_11697023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	569	Open in IMG/M
3300017937\|Ga0187809_10200315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	708	Open in IMG/M
3300020075\|Ga0206349_1254172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	556	Open in IMG/M
3300020199\|Ga0179592_10296222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	719	Open in IMG/M
3300020199\|Ga0179592_10441545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	563	Open in IMG/M
3300020580\|Ga0210403_10404602	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300020581\|Ga0210399_10324982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1284	Open in IMG/M
3300020583\|Ga0210401_11386044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	560	Open in IMG/M
3300021178\|Ga0210408_10062260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces cellostaticus	2916	Open in IMG/M
3300021178\|Ga0210408_10541113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	924	Open in IMG/M
3300021178\|Ga0210408_11129840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	601	Open in IMG/M
3300021315\|Ga0179958_1256069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	538	Open in IMG/M
3300021433\|Ga0210391_10350433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1158	Open in IMG/M
3300021474\|Ga0210390_10314184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1327	Open in IMG/M
3300021559\|Ga0210409_10839927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	791	Open in IMG/M
3300021559\|Ga0210409_11438006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	565	Open in IMG/M
3300021860\|Ga0213851_1480362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	550	Open in IMG/M
3300022527\|Ga0242664_1113778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	568	Open in IMG/M
3300022528\|Ga0242669_1067113	Not Available	643	Open in IMG/M
3300022714\|Ga0242671_1105636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	541	Open in IMG/M
3300022714\|Ga0242671_1110070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	533	Open in IMG/M
3300022715\|Ga0242678_1087826	Not Available	503	Open in IMG/M
3300022722\|Ga0242657_1238146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	517	Open in IMG/M
3300025915\|Ga0207693_10426501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1037	Open in IMG/M
3300025918\|Ga0207662_10929232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	616	Open in IMG/M
3300025924\|Ga0207694_10976875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	716	Open in IMG/M
3300025937\|Ga0207669_11469764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	581	Open in IMG/M
3300025944\|Ga0207661_10312919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1410	Open in IMG/M
3300026078\|Ga0207702_10148964	Not Available	2127	Open in IMG/M
3300026310\|Ga0209239_1324918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	535	Open in IMG/M
3300026374\|Ga0257146_1043991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	724	Open in IMG/M
3300026557\|Ga0179587_10161126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1403	Open in IMG/M
3300026557\|Ga0179587_10210782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1234	Open in IMG/M
3300027330\|Ga0207777_1037026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	884	Open in IMG/M
3300027729\|Ga0209248_10050779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1273	Open in IMG/M
3300027889\|Ga0209380_10682699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	590	Open in IMG/M
3300028379\|Ga0268266_10723638	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300028380\|Ga0268265_12004293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	586	Open in IMG/M
3300028577\|Ga0265318_10055159	All Organisms → cellular organisms → Bacteria	1488	Open in IMG/M
3300029882\|Ga0311368_10431027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	964	Open in IMG/M
3300030626\|Ga0210291_11835185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	524	Open in IMG/M
3300030738\|Ga0265462_12344256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	529	Open in IMG/M
3300030741\|Ga0265459_12781437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	608	Open in IMG/M
3300030743\|Ga0265461_13538111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	529	Open in IMG/M
3300031236\|Ga0302324_102004609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	726	Open in IMG/M
3300031469\|Ga0170819_15182159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	512	Open in IMG/M
3300031543\|Ga0318516_10746121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	554	Open in IMG/M
3300031544\|Ga0318534_10147251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1358	Open in IMG/M
3300031564\|Ga0318573_10343873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	800	Open in IMG/M
3300031708\|Ga0310686_107037377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1913	Open in IMG/M
3300031713\|Ga0318496_10086330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1670	Open in IMG/M
3300031747\|Ga0318502_10526306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	709	Open in IMG/M
3300031771\|Ga0318546_10652840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	740	Open in IMG/M
3300031771\|Ga0318546_10671329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	729	Open in IMG/M
3300031771\|Ga0318546_11118245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	554	Open in IMG/M
3300031781\|Ga0318547_10800261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	587	Open in IMG/M
3300031795\|Ga0318557_10060095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1620	Open in IMG/M
3300031819\|Ga0318568_10763292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	600	Open in IMG/M
3300031821\|Ga0318567_10053312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2096	Open in IMG/M
3300031847\|Ga0310907_10563423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	617	Open in IMG/M
3300031860\|Ga0318495_10167173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	991	Open in IMG/M
3300031860\|Ga0318495_10368029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	635	Open in IMG/M
3300031897\|Ga0318520_10211859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1146	Open in IMG/M
3300032035\|Ga0310911_10241647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1033	Open in IMG/M
3300032043\|Ga0318556_10571842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	590	Open in IMG/M
3300032063\|Ga0318504_10341197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	711	Open in IMG/M
3300032065\|Ga0318513_10427862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	647	Open in IMG/M
3300032068\|Ga0318553_10520520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	623	Open in IMG/M
3300032068\|Ga0318553_10700041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	530	Open in IMG/M
3300032205\|Ga0307472_102172373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	559	Open in IMG/M
3300032829\|Ga0335070_12125190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	503	Open in IMG/M
3300032896\|Ga0335075_11238858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	643	Open in IMG/M
3300032897\|Ga0335071_10820664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	879	Open in IMG/M
3300032955\|Ga0335076_10793758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	829	Open in IMG/M
3300033290\|Ga0318519_10224443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1079	Open in IMG/M
3300033290\|Ga0318519_11061824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	504	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.21%
Host-Associated	Host-Associated	13.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.90%
Plants	Host-Associated → Plants	13.79%
Aquatic	Environmental → Aquatic	4.31%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.21%
Freshwater	Environmental → Aquatic → Freshwater	3.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.59%
Peat	Environmental → Terrestrial → Peat	1.72%
Sediment	Environmental → Aquatic → Sediment	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.52%
Loam	Environmental → Terrestrial → Soil → Loam	10.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.03%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.17%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.31%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.59%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.72%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.86%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	42.24%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.17%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.59%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.86%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.86%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.86%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.86%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.86%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.86%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.86%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	37.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.48%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.59%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.59%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.72%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.72%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.72%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.72%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.86%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.86%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.86%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.86%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.86%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.86%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.86%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.86%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.86%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.86%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006861	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300010146	Soil microbial communities from California, USA to study soil gas exchange rates - JR-CA-SND metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010865	Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013059	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300020075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021315	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_2_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022714	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022715	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027330	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028577	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG	Host-Associated	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030626	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO410-VDE110SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079169

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0063454_1010033181	3300004081	Soil	MAKLPGAIQGARVVGERYVRSQRQQNPEGRMPLFDHLRELRNR
Ga0070687_1000235771	3300005343	Switchgrass Rhizosphere	MAKLPGAIQGARVVGERYVRAQRRQNPEGRMPLFDHLRELRNRVVKMAK*
Ga0070674_1004820501	3300005356	Miscanthus Rhizosphere	MTKLPGAIAGARIVAERFVRSQRRQNPEGRMPLTDHIRELRDR
Ga0070708_1005182571	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAKLPGAIQGARVVGERYVRAQRRANPEGRMPLFDHLRELRNR
Ga0070663_1019841142	3300005455	Corn Rhizosphere	MTKLPGAIAGARIVAERFVRSQRRQNPEGRMPLTDHIREL
Ga0070685_103313572	3300005466	Switchgrass Rhizosphere	KLPGATQDARVVGERYVRSQRRANLEKWMPLFDHLRELRNRVVKMA*
Ga0070733_106620382	3300005541	Surface Soil	MTKLSGAIAGARIVGERFAHSQRQDLKNREGRMPLMDHI
Ga0070665_1018466183	3300005548	Switchgrass Rhizosphere	MAKLSGAIAGARIVGERFLRSQRQQNPEGRMPLTDH
Ga0070762_113217203	3300005602	Soil	MTKLPGAIADARIVGEQFVHSRRQQNPEGRMPLLDHIRELRNRV
Ga0068856_1012525901	3300005614	Corn Rhizosphere	MAKLPSAVAGARIVGERFVRSQRQQNPEGRIPLMDH
Ga0075018_101346214	3300006172	Watersheds	MTKLPGAIAGARVVGERFVHSRRQQNPEGRMPFMDHLRELRNR
Ga0070712_1016132562	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MAKLPGAIQGARVVGERYVRAQRRQNPEGRMPLFDHLRELR
Ga0063777_14930791	3300006861	Peatlands Soil	MAKLPGAIQGARIVGERFVHSQRQANPEGRMPLMD
Ga0075435_1005448383	3300007076	Populus Rhizosphere	MTKLPGAIAGARIAGERFARSRRQQNPEGRMPLLDHL
Ga0075435_1007800351	3300007076	Populus Rhizosphere	MAKLPGATQDARIAGERYARSQRRANPEGRMPLFDHLRELRNR
Ga0105243_124516982	3300009148	Miscanthus Rhizosphere	MTKLPGAIAGARVVGERFVHSRRQQNPEGRMPLMDHLRELRNR
Ga0116215_11820271	3300009672	Peatlands Soil	MTKLPGALAGARIAGERFARSRRQPNPEGRMPLADHAVGGRNDICGLRLGE
Ga0126320_15551672	3300010146	Soil	MAKLPGAIQGARVVGERYVRSQRQQNPEGRMPLFDHLR
Ga0126379_112504901	3300010366	Tropical Forest Soil	MAKLPGAIAGARGVGEHWVRSQRRANPEGRMPLLEHLRE
Ga0134125_122563282	3300010371	Terrestrial Soil	MATRPGALAGARIIGERFVHSRRQNPEGRMPLLDHLRELRNR
Ga0126381_1007955311	3300010376	Tropical Forest Soil	MATRPGALAGACIVGERFVHSRRQQNPEGRMPLLDHLRELRN
Ga0126346_10121703	3300010865	Boreal Forest Soil	MAKLPGAIQGARVVGERYVRAQRQQNPEGRMPLFDHLRELRNRVV
Ga0126350_103305683	3300010880	Boreal Forest Soil	MAKLPGAIQGARIVGEKFVRAQREQNPEGRMPLMDH
Ga0150983_133003302	3300011120	Forest Soil	MASKPSAIRGARIVGARYVRLKRRANPEGRMPLMDHLRELRNR
Ga0137399_115984721	3300012203	Vadose Zone Soil	MAKLPGACQDVRIVGERYVRSQRRANLEGRMPLFDHLRELPTGS*
Ga0137376_111010752	3300012208	Vadose Zone Soil	MAKLPGATQDARIVGERYVRSQRRANLEGRMPLFDHLRELPTGS*
Ga0137385_106329191	3300012359	Vadose Zone Soil	MATRPGALAGARIIGERFVRSRRQQNPEGRMPLLDH
Ga0137397_107313822	3300012685	Vadose Zone Soil	MTKLPGAIAGARIAGEHFARSQRQQNPENPEGRMPLMDHLRELR
Ga0137413_118401361	3300012924	Vadose Zone Soil	MAKLPGAIQGARVVGERYVRAQRQQNPEGRMPLFDHLREL
Ga0137410_112339462	3300012944	Vadose Zone Soil	MTKLPGAIAGARIVAERFVRSRRRQNPEGRMPLLDHVRELRDRVVKNGAR
Ga0164303_105255241	3300012957	Soil	MTKLPGAIAGARIVAERFVRSQRRQNPEGRMPLTDHIRELRDRVVKMALALAA
Ga0164301_103836951	3300012960	Soil	MTKLPGAIAGARIVAERFVRSQRRQNPEGRMPLTDHIRELRDRV
Ga0126369_119986672	3300012971	Tropical Forest Soil	MAKKASAVTGAKIVGQRYLRSKRQQNPEGRMPLMDHLRELRNRL
Ga0154012_1124062	3300013059	Corn, Switchgrass And Miscanthus Rhizosphere	MASKPSAIRGARVVGERYIRMKRRENPEGRMPLMDHLRELR
Ga0157373_101340714	3300013100	Corn Rhizosphere	MTKLPGAIAGARIVAERFVRSQRRQNPEGRMPLTDHIRELRDRVVKMAL
Ga0157372_119809921	3300013307	Corn Rhizosphere	MTKLPGAIAGARIVAERFVRSQRRQNPEGRMPLTDHIRELRDRVVKM
Ga0157375_132982572	3300013308	Miscanthus Rhizosphere	MTKLPGAIAGARIVAERFVRSQRRQNPEGRMPLTDHIR
Ga0182024_121670352	3300014501	Permafrost	MAKLPGAVQGARIVGERFVRSQREQNPDGRMPLMD
Ga0182041_106117201	3300016294	Soil	VLALRREAVMAKLPGAVQGARVVGERFVHSQRQQNPEGRMPLMDHI
Ga0182032_103608341	3300016357	Soil	MAKKASALAGAKIVGQRYVRSKRRQNPEGRMPLMDHL
Ga0182038_116970232	3300016445	Soil	MAKLPGAIQGARIVGERYVRSQRQANPEGRMPLFD
Ga0187809_102003151	3300017937	Freshwater Sediment	MATRPGALAGARIIGERFVHSQRQQNPEGRMPLLDHIR
Ga0206349_12541721	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	MAKLPGAIQGARVVGERYVRAQRRQNPEGRMPLFDHL
Ga0179592_102962222	3300020199	Vadose Zone Soil	MAKLPGAIQGARVVGERYVRAQRRQNPEGRMPLFDHLRELRNRVVKMAL
Ga0179592_104415451	3300020199	Vadose Zone Soil	MTKLPGAIAGARIAGERFARSRRQQNPEGRMPLTD
Ga0210403_104046021	3300020580	Soil	MATRPGALAGARIAGERFARSRRRQNPEGRMPLAGHLRELRTRVVKMTLA
Ga0210399_103249823	3300020581	Soil	MTKLPGAIAGARIVGERFVHSQRQDLKNPEGRMPLMDHI
Ga0210401_113860442	3300020583	Soil	MANVPGAVQGARIVGERFVRTRQRQNPEGRMPLMEH
Ga0210408_100622606	3300021178	Soil	MAELPGATQDARIADERYVRSQRRANPEGRMPLFDHLRELRNRVVTMAK
Ga0210408_105411131	3300021178	Soil	MAKLPGAIQGARVVGERYVRAQRRANPEGRMPLFDHLRELRK
Ga0210408_111298401	3300021178	Soil	MAKIPGAIQGARVVGERYVRAQRRANPEGRMPLFDHLRELRNRV
Ga0179958_12560692	3300021315	Vadose Zone Soil	MAKLPGAIQGARVVGERYVRAQRRQNPEGRMPLFDHLRELRNR
Ga0210391_103504333	3300021433	Soil	MTTLPGAVAGARILGERFARSRRQQNPEGRMPLLDH
Ga0210390_103141843	3300021474	Soil	MASKPSAIRGARVVGDRYLRFKRQANPDGRMPLFD
Ga0210409_108399273	3300021559	Soil	MAKLPGAIQGARVVGERYVRAQRRANPEGRMPLFDHL
Ga0210409_114380061	3300021559	Soil	MARLPGAIAGARIVGKRFARSRRQDPANPEGGMALMDHLREL
Ga0213851_14803622	3300021860	Watersheds	MAKLPGAIAGARVVGERYVRLQRQQNPEGRMPLMDHL
Ga0242664_11137781	3300022527	Soil	MARKPSAVQGAAIVGARYVKAKRQENPEGRMPLMEHL
Ga0242669_10671132	3300022528	Soil	MADKPSAVKGAAIVGQRYLRSKRQENPEGRMPLMEHLR
Ga0242671_11056361	3300022714	Soil	MAKLPGAIQGARVVGEKFVHAQRQQNPEGRMPLMDHIRELRNRV
Ga0242671_11100702	3300022714	Soil	MATKPSAIRGARVVGERYIRSKRRANPEGRMPLFDHLRELR
Ga0242678_10878262	3300022715	Soil	MADNPCAVKGAAIVGARYQRSKKQGNPEGRMPLLEHL
Ga0242657_12381461	3300022722	Soil	MAKLPGALQGARIVGEKFVHAQRQQNPEGRMPLMD
Ga0207693_104265011	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTKLPGAVAGARVVGERFVHFQRQQNPEGRMPFMDHLR
Ga0207662_109292323	3300025918	Switchgrass Rhizosphere	MTKLPGAIAGARIVAERFVRSQRRQNPEGRMPLTDHIRELRD
Ga0207694_109768751	3300025924	Corn Rhizosphere	MATRPGALAGARIIGERFVHSQRQQNPEGRMPLLDH
Ga0207669_114697641	3300025937	Miscanthus Rhizosphere	MTKLPGAIAGARIVAERFVRSQRRQNPEGRMPLTDHIRE
Ga0207661_103129191	3300025944	Corn Rhizosphere	MAKLPGAIQGARVVGERYVRAQRRQNPEGRMPLFDHLRELRNRIV
Ga0207702_101489641	3300026078	Corn Rhizosphere	MAKLPSAVAGARIVGERFVRSQRQQNPEGRIPLMD
Ga0209239_13249181	3300026310	Grasslands Soil	MAKLPGAVQGARIVGERYVRSQRRQNPEGRMPLFD
Ga0257146_10439913	3300026374	Soil	MATRPGALAGARIIGERFVRSRRQQNPEGRMPLLDHLRELRNR
Ga0179587_101611263	3300026557	Vadose Zone Soil	MAKLPGAIQGARVVGERYVRAQRRQNPEGRMPLFDHLRELRNRVVKMALA
Ga0179587_102107821	3300026557	Vadose Zone Soil	PEAVMAKLPGAIQGARVVGERYVRAQRRQNPEGRMPLFDHLRELPTGS
Ga0207777_10370261	3300027330	Tropical Forest Soil	MAKLSSTIAGARIVGERFIHSQRQQNPEGRMPLMDHLR
Ga0209248_100507791	3300027729	Bog Forest Soil	MATHPGAVAGARILGERFARSRQQQNPEGRMPLMDHLRELR
Ga0209380_106826991	3300027889	Soil	MAKLPSAIAGARIVGERFVHTQRQRNPEGRMPLMD
Ga0268266_107236384	3300028379	Switchgrass Rhizosphere	MTKLPGAIAGARVVGERFVHSRRQQNPEGRMPFMDHLREL
Ga0268265_120042932	3300028380	Switchgrass Rhizosphere	MTKLPGAIAGARIVAERFAHSQRQQNPEGRMPLTDHIRELRDHVVKMALALAAGM
Ga0265318_100551591	3300028577	Rhizosphere	MADKPSAIRGARILGERYARAKRRQNPEGRMPLFDHL
Ga0311368_104310273	3300029882	Palsa	MAKLPGAVQGARIVGERFVRSQRQQNPDGRMPLMDQ
Ga0210291_118351851	3300030626	Soil	MPSKPSAIKGARVVGERYLRTKRQVNPEGRMPLKWRKKKEM
Ga0265462_123442562	3300030738	Soil	MAKLPGALQGARIVGEHFVRSQRQANPEGRMPLMD
Ga0265459_127814371	3300030741	Soil	MAKLPGAIQGARIVGEKFVSAQRQNPEGRMPLMDHIRELRNRVVKM
Ga0265461_135381111	3300030743	Soil	MAKLPGAVEGARIGGERFERSQRQQNPEGRMPLMDH
Ga0302324_1020046092	3300031236	Palsa	MAKLPGALAGARIVGERFVHSRRQQNPTGGMPVVHHL
Ga0170819_151821592	3300031469	Forest Soil	MASKPSAIRGARIVGERFLRSQQRANPEGRMSLKLKM
Ga0318516_107461211	3300031543	Soil	MAKKASALAGAKIVGQRYVRSKRRQNPEGRMPLMDHLRELRN
Ga0318534_101472513	3300031544	Soil	MAKLPGAIQGARIVGERYVRAQRRANPEGRMPLFD
Ga0318573_103438733	3300031564	Soil	MAKLPGAIQGARIVGERFVRSQRRVNPEGRMPVMDH
Ga0310686_1070373771	3300031708	Soil	MTKLPGAIAGARILGERFVRSRRPPNPEGRMPLTDHIRELRNR
Ga0318496_100863301	3300031713	Soil	MAKLPGAIQGARIVGERYVSSRRRANPEGRMPLFD
Ga0318502_105263063	3300031747	Soil	MAKKASAVAGAKIVGERYLRSKRRQNPEGRMPLMD
Ga0318546_106528401	3300031771	Soil	MAKKASALSGAKIVGQRYVRSKRRQNPEGRMPLMDHLREL
Ga0318546_106713293	3300031771	Soil	MAKLPGAIQGARIVGERFVRSQRQVNPEGRMPVMDHI
Ga0318546_111182452	3300031771	Soil	MARLPGAIAGARIIGERCAHSRRQQDPEGRMPLLDHLGGLRNRVVKMAPALA
Ga0318547_108002611	3300031781	Soil	MAKLPGAIQGARIVGEHFVRSQRQANPEGRMPLMDHI
Ga0318557_100600951	3300031795	Soil	MAKKASALSGAKIVGQRYVRSKRRQNPEGRMPLMDHLRE
Ga0318568_107632921	3300031819	Soil	MAKLAGAVQGARIVGERFVRSRWQQNPEGRMPLMEHIRE
Ga0318567_100533123	3300031821	Soil	MAKKASALAGAKIVGQRYVRSKRRQNPEGRMPLMDHLR
Ga0310907_105634231	3300031847	Soil	MAKLPGAIQGARVVGERYVRAQRRQNPEGRMPLFDHLREL
Ga0318495_101671732	3300031860	Soil	MAKLPSALTGARIVGERFLHSQQQNPEGRMPLMEHLRELRNRIVT
Ga0318495_103680292	3300031860	Soil	MAKLPGAIQGARIVGQRYVRAQRRQNPEGRMPLFDHLRELRN
Ga0318520_102118593	3300031897	Soil	MAKKASALSGAKIVGQRYVRSKRRQNPEGRMPLMDHLR
Ga0310911_102416473	3300032035	Soil	MAKLPGAVQGARIVGEHFVRSQRRQNPEGRMPVMDHIR
Ga0318556_105718421	3300032043	Soil	MAKLPGALAGARIVGEHFVRSQRQANPEGRMPLMDHI
Ga0318504_103411973	3300032063	Soil	MAKLSSTIAGARIVGERFIRSQRQQNPEGRMPLMD
Ga0318513_104278622	3300032065	Soil	MAKKASALSGAKIVGQRYVRSKRRQNPEGRMPLMDHLRELRNRLI
Ga0318553_105205202	3300032068	Soil	MAKLPAAIAGARIIGERFVHSQRQQNPKGRMPLMDHIR
Ga0318553_107000412	3300032068	Soil	MATRPGALAGARITGERFVRSRRQQNPEGRMPLLDHL
Ga0307472_1021723731	3300032205	Hardwood Forest Soil	MTKLPGAIAGARIVAERFVHSQRQQNPEGRMPLTDHIRELRNRVVKI
Ga0335070_121251901	3300032829	Soil	VAKLPGAIQGARVVGERYVRSQRQKNPEGRMPLFDHLRELRNRVV
Ga0335075_112388583	3300032896	Soil	MVAKLPGAIQGARIVGERFVRSQRLANPEGRMPVMDHLR
Ga0335071_108206641	3300032897	Soil	MAKLPGAIQGARIVGERYVSARRQANPEGRMPLFD
Ga0335076_107937582	3300032955	Soil	VLALRREAVMAKLPGAVQGTRVVGERFVHSQRQQNHEGRMPLMDHIRELRNRVIKVALGLIA
Ga0318519_102244431	3300033290	Soil	MAKKASALSGAKIVGQRYVRSKRRQNPEGRMPLMDHLRELRN
Ga0318519_110618241	3300033290	Soil	MAKLPGAIQGARIVGERYVRAQRRANPEGRMPLFDD

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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