Metagenome Family F079334

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079334
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	81 residues
Representative Sequence	MEPTMDSTQIEEIWTSISHYVPERQKLDCAVDFVKTLVDQGIDSDVLKAAMEYDEKLTEAITIVLEDEADDAYGDDDNWRED
Number of Associated Samples	90
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	68.42 %
% of genes near scaffold ends (potentially truncated)	36.21 %
% of genes from short scaffolds (< 2000 bps)	77.59 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (56.034 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (25.862 % of family members)
Environment Ontology (ENVO)	Unclassified (61.207 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (94.828 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.73% β-sheet: 0.00% Coil/Unstructured: 47.27%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF00154	RecA	22.41
PF05050	Methyltransf_21	6.03
PF13671	AAA_33	5.17
PF13419	HAD_2	1.72
PF01458	SUFBD	1.72
PF03796	DnaB_C	0.86
PF06941	NT5C	0.86
PF06414	Zeta_toxin	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	22.41
COG0719	Fe-S cluster assembly scaffold protein SufB	Posttranslational modification, protein turnover, chaperones [O]	1.72
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	0.86
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	0.86
COG4502	5'(3')-deoxyribonucleotidase	Nucleotide transport and metabolism [F]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.03 %
All Organisms	root	All Organisms	43.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.03 %
cellular organisms	root	All Organisms → cellular organisms	22.41 %
Viruses	superkingdom	All Organisms → Viruses	21.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.03 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	22.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	18.10 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	2.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	18.10 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	12.07 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.45 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	2.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	18.10 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	12.07 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.59 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	2.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	18.10 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	12.07 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2.59 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	18.10 %
Verrucomicrobia bacterium TMED56	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	12.07 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	2.59 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	18.10 %
Verrucomicrobia bacterium TMED56	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	12.07 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	2.59 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.59 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000101\|DelMOSum2010_c10072390	All Organisms → Viruses → Predicted Viral	1576	Open in IMG/M
3300000115\|DelMOSum2011_c10001340	All Organisms → cellular organisms → Bacteria	16453	Open in IMG/M
3300000117\|DelMOWin2010_c10208939	Not Available	595	Open in IMG/M
3300001344\|JGI20152J14361_10115361	Not Available	515	Open in IMG/M
3300001346\|JGI20151J14362_10074434	All Organisms → Viruses → Predicted Viral	1300	Open in IMG/M
3300001450\|JGI24006J15134_10015809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3570	Open in IMG/M
3300001450\|JGI24006J15134_10018833	Not Available	3212	Open in IMG/M
3300001460\|JGI24003J15210_10027199	Not Available	2115	Open in IMG/M
3300001460\|JGI24003J15210_10031907	Not Available	1911	Open in IMG/M
3300001460\|JGI24003J15210_10127229	Not Available	685	Open in IMG/M
3300001589\|JGI24005J15628_10022426	Not Available	2717	Open in IMG/M
3300001948\|GOS2228_1022669	Not Available	1368	Open in IMG/M
3300001955\|GOS2237_1045147	All Organisms → cellular organisms → Bacteria	1714	Open in IMG/M
3300003477\|nap3_10049328	Not Available	948	Open in IMG/M
3300004097\|Ga0055584_100588877	All Organisms → Viruses → Predicted Viral	1161	Open in IMG/M
3300004097\|Ga0055584_102155817	Not Available	569	Open in IMG/M
3300005512\|Ga0074648_1015025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4715	Open in IMG/M
3300006029\|Ga0075466_1068244	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1011	Open in IMG/M
3300006869\|Ga0075477_10348682	Not Available	582	Open in IMG/M
3300007229\|Ga0075468_10000233	All Organisms → cellular organisms → Bacteria	20923	Open in IMG/M
3300007538\|Ga0099851_1082516	All Organisms → Viruses → Predicted Viral	1237	Open in IMG/M
3300007539\|Ga0099849_1312572	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	565	Open in IMG/M
3300007541\|Ga0099848_1025965	All Organisms → Viruses → Predicted Viral	2467	Open in IMG/M
3300007541\|Ga0099848_1186855	Not Available	749	Open in IMG/M
3300009071\|Ga0115566_10137718	All Organisms → Viruses → Predicted Viral	1534	Open in IMG/M
3300009071\|Ga0115566_10770566	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	530	Open in IMG/M
3300009172\|Ga0114995_10572320	Not Available	617	Open in IMG/M
3300009420\|Ga0114994_11133945	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	504	Open in IMG/M
3300009423\|Ga0115548_1077232	All Organisms → Viruses → Predicted Viral	1120	Open in IMG/M
3300009472\|Ga0115554_1046242	All Organisms → Viruses → Predicted Viral	1995	Open in IMG/M
3300009703\|Ga0114933_10171671	Not Available	1483	Open in IMG/M
3300009703\|Ga0114933_10644059	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	681	Open in IMG/M
3300009703\|Ga0114933_10767921	Not Available	616	Open in IMG/M
3300009705\|Ga0115000_10761402	Not Available	596	Open in IMG/M
3300010300\|Ga0129351_1176673	Not Available	835	Open in IMG/M
3300010318\|Ga0136656_1165813	Not Available	751	Open in IMG/M
3300010318\|Ga0136656_1279510	Not Available	545	Open in IMG/M
3300010354\|Ga0129333_11314762	Not Available	597	Open in IMG/M
3300010883\|Ga0133547_11705564	Not Available	1170	Open in IMG/M
3300011013\|Ga0114934_10465857	Not Available	560	Open in IMG/M
3300012919\|Ga0160422_10910553	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	567	Open in IMG/M
3300012928\|Ga0163110_10225679	Not Available	1339	Open in IMG/M
3300012952\|Ga0163180_10426782	Not Available	975	Open in IMG/M
3300012953\|Ga0163179_10510777	Not Available	995	Open in IMG/M
3300012954\|Ga0163111_11732966	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	624	Open in IMG/M
3300017697\|Ga0180120_10189243	Not Available	857	Open in IMG/M
3300017734\|Ga0187222_1136858	Not Available	546	Open in IMG/M
3300017748\|Ga0181393_1148866	Not Available	584	Open in IMG/M
3300017765\|Ga0181413_1157656	Not Available	684	Open in IMG/M
3300017818\|Ga0181565_10116337	All Organisms → Viruses → Predicted Viral	1885	Open in IMG/M
3300017818\|Ga0181565_10931069	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	541	Open in IMG/M
3300017824\|Ga0181552_10144590	All Organisms → Viruses → Predicted Viral	1273	Open in IMG/M
3300017949\|Ga0181584_10400810	Not Available	859	Open in IMG/M
3300017949\|Ga0181584_10757888	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	577	Open in IMG/M
3300017952\|Ga0181583_10112027	All Organisms → Viruses → Predicted Viral	1856	Open in IMG/M
3300017956\|Ga0181580_10058482	All Organisms → Viruses → Predicted Viral	2899	Open in IMG/M
3300017957\|Ga0181571_10753562	Not Available	579	Open in IMG/M
3300017958\|Ga0181582_10568430	Not Available	697	Open in IMG/M
3300017958\|Ga0181582_10811132	Not Available	556	Open in IMG/M
3300017964\|Ga0181589_10661638	Not Available	658	Open in IMG/M
3300017964\|Ga0181589_10827705	Not Available	572	Open in IMG/M
3300017967\|Ga0181590_10028985	All Organisms → Viruses → Predicted Viral	4461	Open in IMG/M
3300017967\|Ga0181590_10240276	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	1342	Open in IMG/M
3300017967\|Ga0181590_10551637	Not Available	795	Open in IMG/M
3300017967\|Ga0181590_10669611	Not Available	702	Open in IMG/M
3300017967\|Ga0181590_10980618	Not Available	552	Open in IMG/M
3300017969\|Ga0181585_10290566	Not Available	1141	Open in IMG/M
3300017986\|Ga0181569_11040918	Not Available	527	Open in IMG/M
3300018049\|Ga0181572_10292199	All Organisms → Viruses → Predicted Viral	1037	Open in IMG/M
3300018413\|Ga0181560_10134232	All Organisms → Viruses → Predicted Viral	1269	Open in IMG/M
3300018415\|Ga0181559_10099338	All Organisms → Viruses → Predicted Viral	1787	Open in IMG/M
3300018416\|Ga0181553_10034015	Not Available	3562	Open in IMG/M
3300018421\|Ga0181592_10410538	Not Available	954	Open in IMG/M
3300018424\|Ga0181591_11061352	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	547	Open in IMG/M
3300020056\|Ga0181574_10105028	Not Available	1916	Open in IMG/M
3300020207\|Ga0181570_10434090	Not Available	621	Open in IMG/M
3300020266\|Ga0211519_1001987	All Organisms → cellular organisms → Bacteria	7047	Open in IMG/M
3300020266\|Ga0211519_1096168	Not Available	521	Open in IMG/M
3300020281\|Ga0211483_10028103	Not Available	1857	Open in IMG/M
3300020337\|Ga0211508_1106165	Not Available	638	Open in IMG/M
3300020374\|Ga0211477_10021616	All Organisms → Viruses → Predicted Viral	2854	Open in IMG/M
3300020374\|Ga0211477_10089708	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	1145	Open in IMG/M
3300020381\|Ga0211476_10137416	Not Available	892	Open in IMG/M
3300020397\|Ga0211583_10127839	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300020428\|Ga0211521_10457811	Not Available	553	Open in IMG/M
3300020436\|Ga0211708_10027187	All Organisms → Viruses → Predicted Viral	2177	Open in IMG/M
3300020438\|Ga0211576_10275884	Not Available	878	Open in IMG/M
3300020438\|Ga0211576_10324130	Not Available	797	Open in IMG/M
3300020442\|Ga0211559_10234289	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	863	Open in IMG/M
3300020451\|Ga0211473_10341098	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	768	Open in IMG/M
3300020463\|Ga0211676_10285979	Not Available	947	Open in IMG/M
3300020468\|Ga0211475_10163093	Not Available	1133	Open in IMG/M
3300021960\|Ga0222715_10336427	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	845	Open in IMG/M
3300021961\|Ga0222714_10196184	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300022200\|Ga0196901_1108126	Not Available	963	Open in IMG/M
3300022200\|Ga0196901_1170484	Not Available	714	Open in IMG/M
3300022925\|Ga0255773_10036855	All Organisms → Viruses	3078	Open in IMG/M
3300022928\|Ga0255758_10115902	All Organisms → Viruses → Predicted Viral	1384	Open in IMG/M
3300023087\|Ga0255774_10389135	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	632	Open in IMG/M
3300024346\|Ga0244775_10513549	Not Available	978	Open in IMG/M
3300025120\|Ga0209535_1000690	Not Available	23589	Open in IMG/M
3300025120\|Ga0209535_1005860	Not Available	7477	Open in IMG/M
3300025120\|Ga0209535_1013450	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	4448	Open in IMG/M
3300025168\|Ga0209337_1007344	All Organisms → cellular organisms → Bacteria	7305	Open in IMG/M
3300025590\|Ga0209195_1080185	Not Available	754	Open in IMG/M
3300025626\|Ga0209716_1178195	Not Available	527	Open in IMG/M
3300025632\|Ga0209194_1013718	All Organisms → Viruses → Predicted Viral	3012	Open in IMG/M
3300025696\|Ga0209532_1051432	All Organisms → Viruses → Predicted Viral	1655	Open in IMG/M
3300025806\|Ga0208545_1000948	Not Available	13260	Open in IMG/M
3300027780\|Ga0209502_10309449	Not Available	677	Open in IMG/M
3300029448\|Ga0183755_1010915	All Organisms → cellular organisms → Bacteria → Proteobacteria	3564	Open in IMG/M
3300029448\|Ga0183755_1010946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3556	Open in IMG/M
3300029448\|Ga0183755_1065755	Not Available	834	Open in IMG/M
3300031519\|Ga0307488_10005953	All Organisms → cellular organisms → Bacteria	10067	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.14%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.86%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	27.59%
Unclassified	Environmental → Aquatic → Marine → Unclassified	20.69%
Oceanic	Environmental → Aquatic → Marine → Oceanic	17.24%
Coastal	Environmental → Aquatic → Marine → Coastal	13.79%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	7.76%
Pelagic	Environmental → Aquatic → Marine → Pelagic	6.03%
Volcanic	Environmental → Aquatic → Marine → Volcanic	3.45%
Strait	Environmental → Aquatic → Marine → Strait	2.59%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.86%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	25.86%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	20.69%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	14.66%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	13.79%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	7.76%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	6.03%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	3.45%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	2.59%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	2.59%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.72%
Epilimnion	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion	0.86%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	25.86%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	18.10%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	12.93%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	8.62%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	6.03%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	4.31%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	4.31%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	3.45%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	2.59%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	2.59%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.72%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	1.72%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.72%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.72%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	0.86%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	0.86%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.86%
Estuarine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Estuarine	0.86%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000101	Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010	Environmental	Open in IMG/M
3300000115	Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011	Environmental	Open in IMG/M
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300001344	Pelagic Microbial community sample from North Sea - COGITO 998_met_02	Environmental	Open in IMG/M
3300001346	Pelagic Microbial community sample from North Sea - COGITO 998_met_01	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300001589	Marine viral communities from the Pacific Ocean - LP-40	Environmental	Open in IMG/M
3300001948	Marine microbial communities from Chesapeake Bay, Maryland, USA - GS012	Environmental	Open in IMG/M
3300001955	Marine microbial communities from Gulf of Panama, Panama - GS021	Environmental	Open in IMG/M
3300003477	Estuarine microbial communities from the Sarno estuary, Gulf of Naples, Italy - Sample Station 3	Environmental	Open in IMG/M
3300004097	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG	Environmental	Open in IMG/M
3300005512	Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_water	Environmental	Open in IMG/M
3300006029	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA	Environmental	Open in IMG/M
3300006869	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA	Environmental	Open in IMG/M
3300007229	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300007541	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009423	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423	Environmental	Open in IMG/M
3300009472	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404	Environmental	Open in IMG/M
3300009703	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaG	Environmental	Open in IMG/M
3300009705	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128	Environmental	Open in IMG/M
3300010300	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNA	Environmental	Open in IMG/M
3300010318	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNA	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300011013	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaG	Environmental	Open in IMG/M
3300012919	Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaG	Environmental	Open in IMG/M
3300012928	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG	Environmental	Open in IMG/M
3300012952	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017734	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24 (version 2)	Environmental	Open in IMG/M
3300017748	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21	Environmental	Open in IMG/M
3300017765	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017824	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017957	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017958	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017964	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017986	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018049	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018413	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018415	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018416	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020056	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101410AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020207	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101406AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020266	Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX556082-ERR598951)	Environmental	Open in IMG/M
3300020281	Marine microbial communities from Tara Oceans - TARA_A100001035 (ERX556022-ERR599116)	Environmental	Open in IMG/M
3300020337	Marine microbial communities from Tara Oceans - TARA_E500000075 (ERX289009-ERR315861)	Environmental	Open in IMG/M
3300020374	Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291766-ERR318618)	Environmental	Open in IMG/M
3300020381	Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291769-ERR318620)	Environmental	Open in IMG/M
3300020397	Marine microbial communities from Tara Oceans - TARA_B100000123 (ERX556052-ERR599075)	Environmental	Open in IMG/M
3300020428	Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)	Environmental	Open in IMG/M
3300020436	Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984)	Environmental	Open in IMG/M
3300020438	Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)	Environmental	Open in IMG/M
3300020442	Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)	Environmental	Open in IMG/M
3300020451	Marine microbial communities from Tara Oceans - TARA_B100001778 (ERX555927-ERR598996)	Environmental	Open in IMG/M
3300020463	Marine microbial communities from Tara Oceans - TARA_B100001057 (ERX555988-ERR599050)	Environmental	Open in IMG/M
3300020468	Marine microbial communities from Tara Oceans - TARA_A100000164 (ERX555914-ERR598993)	Environmental	Open in IMG/M
3300020471	Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX556063-ERR599002)	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300022200	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)	Environmental	Open in IMG/M
3300022925	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG	Environmental	Open in IMG/M
3300022928	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG	Environmental	Open in IMG/M
3300023087	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300025120	Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)	Environmental	Open in IMG/M
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental	Open in IMG/M
3300025590	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420 (SPAdes)	Environmental	Open in IMG/M
3300025626	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531 (SPAdes)	Environmental	Open in IMG/M
3300025632	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413 (SPAdes)	Environmental	Open in IMG/M
3300025696	Pelagic Microbial community sample from North Sea - COGITO 998_met_02 (SPAdes)	Environmental	Open in IMG/M
3300025806	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027780	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90 (SPAdes)	Environmental	Open in IMG/M
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2010_100723901	3300000101	Marine	MQNSMEQEQIEEIWTTVSHYITDRQKLDCAVDFVKTLVDQGVSIRTLKAAQEYDEKLTEAIDIVLEDTEDD
DelMOSum2011_100013409	3300000115	Marine	MQNSMEQEQIEEIWTTVSHYITDRQKLDCAVDFVKTLVDQGVSIRTLKAAQEYDEKLTEAIDIVLEDTEDDEEADTSNYYENE*
DelMOWin2010_102089391	3300000117	Marine	MQNSMEQEQIEEIWTTVSHYITDRQKLDCAVDFVKTLVDQGVSIRTLKAAQEYDEKLTEAIDIVLEDT
JGI20152J14361_101153611	3300001344	Pelagic Marine	TISHYVPERQKLDCAVDFVKTLVDQSIDYQILKASMEYDEKLTEAIKIVLEDEADDAYGNGNVDNWHEE*
JGI20151J14362_100744343	3300001346	Pelagic Marine	QRKMEQTMDSTQIEELWTTVSHYVPERHKLDCAVDFVKTLVDQGIDSEVLKGAMEYDEKLTEAITIVLEDEAEDAYGDDDNWRED*
JGI24006J15134_100158097	3300001450	Marine	MEQIMDSTQIEEIWTSVSHYIPERQKIDCAVDYVKTLLDHGIESSTLKAAMEYDEKLTEAIKIVLEDEIDDSYGADNHDENNWHEE*
JGI24006J15134_100188335	3300001450	Marine	MQNSMEQEQIEEIWTTVSHYITDRQKLDCAVDFVKTLVDQGVPIRTLKAAQEYDEKLTEAIDIVLEDTEDDEEADTSNYYENE*
JGI24003J15210_100271993	3300001460	Marine	MEQTMDSAQIEEIWTTVTHYIPERQKLDCAVDFVKTLVDQGVDMRTLKAAQEYDEKLTEAITIVLQDADDDEFVDTEFYEDR*
JGI24003J15210_100319072	3300001460	Marine	MEQTMDSTHIEEIWTTVTHYIPERQKLDCAVDFVKTLVDQGVDMRTLKAAQEYDEKLTEAITIVLQDADDDEFVDTEFYEDR*
JGI24003J15210_101272292	3300001460	Marine	MXNSMEQEQIEEIWTTVSHYITDRQKLDCAVDFVKTLVDQGVSIRTLKAAQEYDEKLTEAIDIVLEDTEDDEEADTSNYYENE*
JGI24005J15628_100224261	3300001589	Marine	MQNSMEQEQIEEIWTTVSHYITDRQKLDCAVDFVKTLVDQGVSIRTLKAAQEYDEKLTEAIDIVLEDTEDDEEAD
GOS2228_10226692	3300001948	Marine	MQNSMDHEQIEEIWTTISHYVTERQKLDCAVDYVKTLLDQGVSIKTLKAAQEYDDKLTEAIEIVLEDTEDDEYVDTDNYYEDE*
GOS2237_10451473	3300001955	Marine	MEQTMDSTQIEEIWTTVSHYIPERQKLDCAVDFVKTLVDQGVESKVLKAAQEYDEKLTEAITIVLEDAEEDEYADTSNYYEDE*
nap3_100493282	3300003477	Estuarine	MQNSMDHEQIEEIWTTVSHYVTERQKLDCAVNFVKVLVDQGVDIKTLRAAQEYDEKLTEAVNIVLEDTEDNEEVEVSNYYDEDE*
Ga0055584_1005888773	3300004097	Pelagic Marine	MEQTMDSTQIEEIWTTISHYVPERQKLDCAVDFVKTLVDQSIDYQILKASMEYDEKLTEAIKIVLEDEADDAYGNGNVDNWHEE*
Ga0055584_1021558172	3300004097	Pelagic Marine	MEQTMDSTQIEELWTTVSHYVPERHKLDCAVDFVKTLVDQGIDSEVLKGAMEYDEKLTEAITIVLEDEAEDAYGDDDNWRED*
Ga0074648_10150252	3300005512	Saline Water And Sediment	MQNSMDHEQIEEIWTSISHYVTERQKLDCAVDYVKTLLDQGVSIKTLKAAQEYDDKLTEAIEIVLKGIEDDEDVDVSNYYDDEDE*
Ga0075466_10682442	3300006029	Aqueous	MTLLILKPNPRNQRMQNSMEQEQIEEIWTTVSHYITDRQKLDCAVDFVKTLVDQGVSIRTLKAAQEYDEKLTEAIDIVLEDTEDDEEADTSNYYENE*
Ga0075477_103486821	3300006869	Aqueous	MTLLKLKPNLRNQRMQNSMDHEQIEEIWTTISHYVTERQKLDCAVDYVKTLVDQGISIKTLRAAQEYDDKLTEAIEIV
Ga0075468_100002339	3300007229	Aqueous	MEQEQIEEIWTTVSHYITDRQKLDCAVDFVKTLVDQGVSIRTLKAAQEYDEKLTEAIDIVLEDTEDDEEADTSNYYENE*
Ga0099851_10825162	3300007538	Aqueous	MQNNMNHEQIEEIWTTISHYVTERQKLDCAVDYVKTLLDQGVPSKTLKAAQEYDDKLTEAIEIVLEDADDEEYVDTDNYYEDE*
Ga0099849_13125722	3300007539	Aqueous	MDHEQIEEIWTSISHYVTDRQKLDCAVDYVKTLLDQGVPSKTLKAAQEYDDKLTEAIEIVLEDADDEEYVDTDNYYEDE*
Ga0099848_10259656	3300007541	Aqueous	MDHEQIEEIWTTISHYVTERQKLDCAVDYVKTLLDQGISIKTLKAAQEYDDKLTEAIEIVLEDTEDDEYVDTDNYYEDE*
Ga0099848_11868552	3300007541	Aqueous	MQNSMDHEQIEEIWTTISHYVTDRQKLDCAVDYVKTLVDQGISIKTLKAAQEYDDKLTEAIEIVLEDTEDDEYVDTDNYYEDE*
Ga0115566_101377182	3300009071	Pelagic Marine	MDSTQIEEIWTTISHYVPERQKLDCAVDFVKTLVDQSIDYQILKASMEYDEKLTEAIKIVLEDEADDAYGNGNVDNWHEE*
Ga0115566_107705662	3300009071	Pelagic Marine	MDSTQIEELWTTVSHYVPERHKLDCAVDFVKTLVDQGIDSEVLKGAMEYDEKLTEAITIVLEDEAEDAY
Ga0114995_105723201	3300009172	Marine	SMEQEQIEEIWTTVSHYITDRQKLDCAVDFVKTLVDQGVSIRTLKAAQEYDEKLTEAIDIVLEDTEDDEEADTSNYYENE*
Ga0114994_111339452	3300009420	Marine	MDSTHIEEIWTTISHYVPERQKLDCAVDFVKTLVDQGVPIRTLKAAQEYDDKLTEAIDIVLEDTEDDEEADTSNYYENE*
Ga0115548_10772322	3300009423	Pelagic Marine	MDSTQIEEIWTTISHYVPERQKLDCAVDFVKTLVDQSIDYQILKASMEYDEKLTEAIKIVLEDEADD
Ga0115554_10462423	3300009472	Pelagic Marine	MDSTQIEEIWTTISHYVPERQKLDCAVDFVKTLVDQGIDSEVLKGAMEYDEKLTEAITIVLEDEAEDAYGDDDNWRED*
Ga0114933_101716712	3300009703	Deep Subsurface	MQNSMDHEQIEEIWTTVSHYVTERQKLDCAVNFVKVLVDQGVDIKTLRAAQEYDEKLTEAVNIVLEDTEDNEEVDVSNYYDEDE*
Ga0114933_106440592	3300009703	Deep Subsurface	MDSNLVEEIWTSISHYVPERQKIDCAVDYVKTLIDQGVEHSTLKAAMEYDEKLTEGIKIVLADEVDDSYGLEDNEDEN
Ga0114933_107679212	3300009703	Deep Subsurface	MTSEQIETIWSSISHYVPERQKLDCAIDYIKTLVDHGADSSVIRGSMEIDEKLTEAIKIVLEDEADDVLNTSEYGYEEQ*
Ga0115000_107614021	3300009705	Marine	VSHYITDRQKLDCAVDFVKTLVDQGVSIRTLKAAQEYDEKLTEAIDIVLEDTEDDEEADTSNYYENE*
Ga0129351_11766733	3300010300	Freshwater To Marine Saline Gradient	SHYVTERQKLDCAVDYVKTLVDQGISIKTLKAAQEYDDKLTEAIEIVLEDTEDDEYVDTDNYYEDE*
Ga0136656_11658132	3300010318	Freshwater To Marine Saline Gradient	MQNSMDHEQIEEIWTTISHYVTERQKLDCAVDYVKTLVDQGISIKTLKAAQEYDDKLTEAIEIVLEDVEDDEDVDVSNYYNDEDE*
Ga0136656_12795101	3300010318	Freshwater To Marine Saline Gradient	QIEEIWTTISHYVTERQKLDCAVDYVKTLVDQGISIKTLKAAQEYDDKLTEAIEIVLEDTEDDEYVDTDNYYEDE*
Ga0129333_113147622	3300010354	Freshwater To Marine Saline Gradient	MQNSMDHEQIEEIWTTISHYVTERQKLDCAVDYVKTLVDQGISIKTLKAAQEYDDKLTEAIEIVLEDTE
Ga0133547_117055641	3300010883	Marine	MHNSMEQEQIEEIWTTVSHYITDRQKLDCAVDFVKTLVDQGVPIRTLKAAQEYDDKLTEAIDIVLEDTEDDEEADTSNYYENE*
Ga0114934_104658572	3300011013	Deep Subsurface	MDSTQIEELWTTVSHYLTERQKLDCAVDFVKTLVDQGVSIKTLKAAQEYDDKLTEAITIVLEDAEDDEYVDTGNYYEDE*
Ga0160422_109105532	3300012919	Seawater	MDSNLVEEIWTSISHYVPERQKLDCAVDYVKTLIDQGVEHSTLKAAMEYDEKLTEAIKIVLADEVDDSYGLEDNADENNWHEE*
Ga0163110_102256793	3300012928	Surface Seawater	MDHEQIEEIWTTVSHYVTERQKLDCAVNFVKVLVDQGVDIKTLRAAQEYDEKLTEAVNIVLEDTEDNEEVDVSNYYDEDE*
Ga0163180_104267822	3300012952	Seawater	MDSTQIEEIWTTVSHYIPERQKLDCAVDFVKTLVDQGVESKVLKAAQEYDEKLTEAITIVLEDAEEDEYADTSNYYEDE*
Ga0163179_105107771	3300012953	Seawater	MDSNLVEEIWTSISHYVPERQKIDCAVDYVKTLIDQGVEHSTLKAAMEYDEKLTEGIKIVLADEVDDSYGLEDNEDENNWHEE*
Ga0163111_117329662	3300012954	Surface Seawater	MDSAQIEEIWTTVSHYVPERQKLDCGVDFVKTLVDQGIDSEVLKAAMEYDEKLTEAITIVLEDEADDAYGDDDDNWQLECVDPDSWSG
Ga0180120_101892432	3300017697	Freshwater To Marine Saline Gradient	MEQTMDSTHIEEIWTTISHYVPERQKLDCAVDFVKTLVDQSIDYQILKASMEYDEKLTEAIKIVLEDEADDAYGNGNVDNWHEE
Ga0187222_11368582	3300017734	Seawater	MEQTMDSTHIEEIWTTVTHYIPERQKLDCAVDFVKTLVDQGVDMRTLKAAQEYDEKLTEAITIVLQDADD
Ga0181393_11488661	3300017748	Seawater	MEQTMDSTHIEEIWTTVTHYIPERQKLDCAVDFVKTLVDQGVDMRTLKAAQEYDEKLTEAITIVLQDADDDEFVDTEFYE
Ga0181413_11576561	3300017765	Seawater	MEQTMDSTHIEEIWTTVTHYIPERQKLDCAVDFVKTLVDQGVDMRTLKAAQEYDEKLTEAITIVLQDADDDEFVDTEFYED
Ga0181565_101163372	3300017818	Salt Marsh	MEHYMDSTQIEELWTTVSHYVPERQKLDCAVDFVKTLVDQGIDSEVLKGAMEYDEKLTEAIKIVLEDEAEDAYGDADNWHEE
Ga0181565_109310692	3300017818	Salt Marsh	MTLAISQTRRQHKMEPTMDSTQIEEIWTSISHYVPERQKLDCAVDFVKTLVDQGIDSDVLKAAMEYDEKLTEAITIVLEDEADDAYGDDNNWRED
Ga0181552_101445902	3300017824	Salt Marsh	MEPTMDSTQIEEIWTSISHYVPERQKLDCAVDFVKTLVDQGIDSDVLKAAMEYDEKLTEAITIVLEDEADDAYGDDNNWRED
Ga0181584_104008101	3300017949	Salt Marsh	MEPTMDSTQIEEIWTSISHYVPERQKLDCAVDFVKTLVDQGIDSDVLKAAMEYDEKLTEAITIVLEDEVDDAYGDDDENWRED
Ga0181584_107578882	3300017949	Salt Marsh	MEHYMDSTQIEELWTTVSHYVPERQKLDCAVDFVKTLVDQGIDSEVLKGAMEYDEKLTEAITIVLEDEAEDAYGDDDNWHEE
Ga0181583_101120273	3300017952	Salt Marsh	MEHYMDSTQIEELWTTVSHYVPERQKLDCAVDFVKTLVDQGIDSEVLKGAMEYDEKLTEAITIVLEDEAEDAYGAADNWHEDE
Ga0181580_100584821	3300017956	Salt Marsh	LWTTVSHYVPERQKLDCAVDFVKTLVDQGIDSEVLKGAMEYDEKLTEAITIVLEDEAEDAYGAADNWHEDE
Ga0181571_107535621	3300017957	Salt Marsh	MTLTIHQPRSQRKMEHYMDSTQIEELWTTVSHYVPERQKIDCAVDFVKTLIDQGIDSEVLKGAMEYDEKLTEAITIVLEDEAEDAYGAADNWH
Ga0181582_105684302	3300017958	Salt Marsh	MTLVRSQHRRQQQMEHYMDSTQIEEIWTSISHYVPERQKLDCAVDFVKTLVDQGIDSDVLKAAMEYDEKLTEAITIVLEDEVDDAYGDDDENWRED
Ga0181582_108111322	3300017958	Salt Marsh	MTLTIHQPRSQRKMEHYMDSTQIEEIWTSISHYIPERQKLDCGVDFVKTLVDQGVENKVLKAAQEYDEKLTEAITIVLEDAE
Ga0181589_106616382	3300017964	Salt Marsh	HKMEPTMDSTQIEEIWTSISHYVPERQKLDCAVDFVKTLVDQGIDSDVLKAAMEYDEKLTEAITIVLEDEADDAYGDDDNWRED
Ga0181589_108277052	3300017964	Salt Marsh	MEPTMDSTQIEEIWTSISHYVPERQKLDCAVDFVKTLVDQGIDSDVLKGAMEYDEKLTEAITIVLEDEADDAYGDDDNWRED
Ga0181590_100289858	3300017967	Salt Marsh	MEHYMDSTQIEELWTTVSHYVPERQKIDCAVDFVKTLIDQGIDSEVLKGAMEYDEKLTEAITIVLEDEAEDAYGDDDNWHEE
Ga0181590_102402761	3300017967	Salt Marsh	KMEPTMDSTQIEEIWTSISHYIPERQKLDCGVDFVKTLVDQGIDSAVLKGAMEYDEKLTEAITIVLEDEADDAYGDDDNWRED
Ga0181590_105516372	3300017967	Salt Marsh	MEPTMDSTQIEEIWTSISHYVPERQKLDCAVDFVKTLVDQGIDSDVLKAAMEYDEKLTEAITIVLEDEADDAYGDDDNWRED
Ga0181590_106696112	3300017967	Salt Marsh	MQNSMDHEQIEEIWTTISHYVTERQKLDCAVDYVKTLVDQGISIKTLKAAQEYDDKLTEAIEIVLEDTEDDEYVDTDNYYEDE
Ga0181590_109806182	3300017967	Salt Marsh	EHYMDSTQIEEIWTSISHYVPERQKLDCAVDFVKTLVDQGIDSDVLKGAMEYDEKLTEAITIVLEDEADDAYGDDDNWRED
Ga0181585_102905662	3300017969	Salt Marsh	MEHYMDSTQIEEIWTSISHYIPERQKLDCGVDFVKTLVDQGIDSAVLKGAMEYDEKLTEAITIVLEDEADDAYGDDDNWRED
Ga0181569_110409182	3300017986	Salt Marsh	TQIEEIWTSISHYVPERQKLDCAVDFVKTLVDQGIDSDVLKAAMEYDEKLTEAITIVLEDEADDAYGDDNNWRED
Ga0181572_102921992	3300018049	Salt Marsh	MTLTIHQPRSQRKMEHYMDSTQIEELWTTVSHYVPERQKIDCAVDFVKTLIDQGIDSEVLKGAMEYDEKLTEAITIVLEDEAEDAYGAADNWHEDE
Ga0181560_101342321	3300018413	Salt Marsh	EELWTTVSHYVPERQKLDCAVDFVKTLIDQGIDSEVLKGAMEYDEKLTEAITIVLEDEAEDAYGAADNWHEE
Ga0181559_100993382	3300018415	Salt Marsh	MTLTIHQPRSQRKMEHYMDSTQIEELWTTVSHYVPERQKLDCAVDFVKTLVDQGIDSEVLKGAMEYDEKLTEAITIVLEDEAEDAYGDDDNWHEE
Ga0181553_100340154	3300018416	Salt Marsh	MEHYMDSTQIEELWTTVSHYVPERQKIDCAVDFVKTLIDQGIDSEVLKGAMEYDEKLTEAITIVLEDEAEDAYGAADNWHEDE
Ga0181592_104105382	3300018421	Salt Marsh	MEQTMDSAHIEEIWTSVSHYVSERQKLDCAVDFVKTLVDQGVSIKTLKAAQEYDDKLSEAITIVLEDAEDDEYVDTDNYYEDQ
Ga0181591_110613522	3300018424	Salt Marsh	MTLVRSQPRRQQQMEHYMDSTQIEEIWTSISHYIPERQKLDCGVDFVKTLVDQGIDSAVLKGAMEYDEKLTEAITIVLEDEADDAYGDDDNWRED
Ga0181574_101050283	3300020056	Salt Marsh	MEHYMDSTQIEELWTTVSHYVPERQKIDCAVDFVKTLIDQGIDSEVLKGAMEYDEKLTEAIKIVLEDEAEDAYGDDDNWHEE
Ga0181570_104340902	3300020207	Salt Marsh	MEHYMDSTQIEELWTTVSHYVPERQKIDCAVDFVKTLIDQGIDSEVLKGAMEYDEKLTEAITIVLEDEAEDAYGDDDNW
Ga0211519_100198711	3300020266	Marine	MQNSMDHEQIEEIWTTVSHYVTERQKLDCAVNFVKVLVDQGVDIKTLRAAQEYDEKLTEAVNIVLEDTEDNEEVDVSNYYDEDE
Ga0211519_10961682	3300020266	Marine	IQRKMEHTMDSTQIEEIWTTVSHYIPERQKLDCAVDFVKTLVDQGVESKVLKAAQEYDEKLTEAITIVLEDAEEDEYADTSNYYEDE
Ga0211483_100281033	3300020281	Marine	MEQTMDSTQIEELWTTVSHYVTERQKLDCAVDFVKTLVDQGVSIKTLKAAQEYDDKLTEAITIVLEDAEDDEYVDTDNYYEDE
Ga0211508_11061651	3300020337	Marine	VSHYVTERQKLDCAVNFVKVLVDQGVDIKTLRAAQEYDEKLTEAVNIVLEDTEDNEEVDVSNYYDEDE
Ga0211477_100216162	3300020374	Marine	MEPQMDSNLVEEIWTSISHYVPERQKIDCAVDYVKTLIDQGVEHSTLKAAMEYDEKLTEGIKIVLADEVDDSYGLEDNEDENNWHEE
Ga0211477_100897082	3300020374	Marine	MEQMTSEQIETIWSSISHYVPERQKLDCAIDYIKTLVDHGADSSVIRGSMEIDEKLTEAIKIVLEDEADDVLNTSEYGYEEQ
Ga0211476_101374162	3300020381	Marine	MTLTIHQPRSQRKMEQTMDSTQIEELWTTVSHYVPERQKLDCSVDFVKTLVDQGIDSEVLKGAMEYDEKLTEAIKIVLEDEAEDAYGDDDNWHEE
Ga0211583_101278393	3300020397	Marine	TRSQQKMEQAMDSNLVEEIWTSISHYVPERQKVDCAVDYVKTLIDQGVDNSTLKAAMEYDEKLTEAIKIVLEDEVDDSYGLEDHADENNWHEE
Ga0211521_104578112	3300020428	Marine	MEQTMDSTQIEELWTTVSHYVPERQKLDCSVDFVKTLVDQGIDSEVLKGAMEYDEKLTEAIKIVLEDEAEDAYGDDDNWHEE
Ga0211708_100271872	3300020436	Marine	MTLLTQLNRIQRKMEQIMDSTQIEEIWTTVSHYVPERQKLDCAVDFVKTLIDQGTDSEVLKAAMEYDEKLTEAIKIVLEDEADDAYGDDDNWHEE
Ga0211576_102758843	3300020438	Marine	HNSMEQEQIEEIWTTVSHYITDRQKLDCAVDFVKTLVDQGVSIRTLKAAQEYDEKLTEAIDIVLEDTEDDEEADTSNYYENE
Ga0211576_103241302	3300020438	Marine	MEQTMDSTHIEEIWTTVTHYIPERQKLDCAVDFVKTLVDQGVDMRTLKAAQEYDEKLTEAITIVLQDADDDEFVDTEFYEDR
Ga0211559_102342892	3300020442	Marine	MDSTQIEEIWTTVSHYVPERQKLDCAVDFVKTLIDQGVENKVLKAAQEYDEKLTEAITIVLEDAEDDEYADTSNYYEDE
Ga0211473_103410982	3300020451	Marine	MEPQMDSNLVEEIWTSISHYVPERQKLDCAVDYVKTLIDQGVEHSTLKAAMEYDEKLTEAIKIVLEDEVDDSYGLEDNADENNWHEE
Ga0211676_102859792	3300020463	Marine	MEQMDSTQIEEIWTTVSHYLPERQKLDCAVDFVKTLIDQGTDSEVLRAAMEYDEKLTEAIKIVLEDEADDAYSDNDNWHEE
Ga0211475_100916034	3300020468	Marine	HYIPERQKLDCAVDFVKTLVDQGVESKVLKAAQEYDEKLTEAITIVLEDAEEDEYADTSNYYEDE
Ga0211475_101630931	3300020468	Marine	MEQMTSEQIETIWSSISHYVPERQKLDCAIDYIKTLVDHGADSSVIRGSMEIDEKLTEAIKIVLEDEAD
Ga0211614_105284051	3300020471	Marine	SEQIETIWSSISHYVPERQKLDCAIDYVKTLVDQGADSSVIRGSMEIDEKLTEAIRIVLEDEAEDVLNTTEYGYEDQ
Ga0222715_103364271	3300021960	Estuarine Water	MQNSMDHEQIEEIWTTISHYVTERQKLDCAVDYVKTLVDQGISIKTLRAAQEYDDKLTEAIEIVLEDTEDDEYVDTDNYYEDE
Ga0222714_101961843	3300021961	Estuarine Water	TTISHYVTERQKLDCAVDYVKTLVDQGISIKTLRAAQEYDDKLTEAIEIVLEDTEDDEYVDTDNYYEDE
Ga0196901_11081262	3300022200	Aqueous	MQNNMNHEQIEEIWTTISHYVTERQKLDCAVDYVKTLLDQGVPSKTLKAAQEYDDKLTEAIEIVLEDADDEEYVDTDNYYEDE
Ga0196901_11704841	3300022200	Aqueous	SMDHEQIEEIWTTISHYVTDRQKLDCAVDYVKTLLDQGVSPKTLKAAQEYDDKLTEAIEIVLEDTEDDEYVDTDNYYEDE
Ga0255773_100368551	3300022925	Salt Marsh	MEHYMDSTQIEELWTTVSHYVPERQKLDCAVDFVKTLVDQGIDSEVLKGAMEYDEKLTEAITIVLEDEAEDAYGDDDN
Ga0255758_101159022	3300022928	Salt Marsh	MEHYMDSTQIEELWTTVSHYVPERQKLDCAVDFVKTLVDQGIDSEVLKGAMEYDEKLTEAIKIVLEDEAEDAYGDDDNWHEE
Ga0255774_103891352	3300023087	Salt Marsh	MEHYMDSTQIEELWTTVSHYVPERQKIDCAVDFVKTLIDQGIDSEVLKGAMEYDEKLTEAITIVLEDEAEDAYGAADNW
Ga0244775_105135492	3300024346	Estuarine	MTLLILKTNPRNQRMHNSMEQEQIEEIWTTVSHYITDRQKLDCAVDFVKTLVDQGVSIRTLKAAQEYDEKLTEAIDIVLEDTEDDEEADTSNYYENE
Ga0209535_10006902	3300025120	Marine	MEQTMDSAQIEEIWTTVTHYIPERQKLDCAVDFVKTLVDQGVDMRTLKAAQEYDEKLTEAITIVLQDADDDEFVDTEFYEDR
Ga0209535_10058608	3300025120	Marine	MEQIMDSTQIEEIWTSVSHYIPERQKIDCAVDYVKTLLDHGIESSTLKAAMEYDEKLTEAIKIVLEDEIDDSYGADNHDENNWHEE
Ga0209535_10134503	3300025120	Marine	MQNSMEQEQIEEIWTTVSHYITDRQKLDCAVDFVKTLVDQGVSIRTLKAAQEYDEKLTEAIDIVLEDTEDDEEADTSNYYENE
Ga0209337_10073449	3300025168	Marine	MTLLILKPNPRNQRMQNSMEQEQIEEIWTTVSHYITDRQKLDCAVDFVKTLVDQGVPIRTLKAAQEYDDKLTEAIDIVLEDTEDDEEADTSNYYENE
Ga0209195_10801851	3300025590	Pelagic Marine	TTISHYVPERQKLDCAVDFVKTLVDQSIDYQILKASMEYDEKLTEAIKIVLEDEADDAYGNGNVDNWHEE
Ga0209716_11781952	3300025626	Pelagic Marine	MEQTMDSTQIEEIWTTISHYVPERQKLDCAVDFVKTLVDQSIDYQILKASMEYDEKLTEAIKIVLEDEADDAY
Ga0209194_10137184	3300025632	Pelagic Marine	MEQTMDSTQIEEIWTTISHYVPERQKLDCAVDFVKTLVDQSIDYQILKASMEYDEKLTEAIKIVLEDEADDAYGNGNVDNWHEE
Ga0209532_10514322	3300025696	Pelagic Marine	MEQTMDSTQIEELWTTVSHYVPERHKLDCAVDFVKTLVDQGIDSEVLKGAMEYDEKLTEAITIVLEDEAEDAYGDDDNWRED
Ga0208545_10009489	3300025806	Aqueous	MTLLILKPNPRNQRMQNSMEQEQIEEIWTTVSHYITDRQKLDCAVDFVKTLVDQGVSIRTLKAAQEYDEKLTEAIDIVLEDTEDDEEADTSNYYENE
Ga0209502_103094492	3300027780	Marine	MTFLILKPNPRNQRMQNSMEQEQIEEIWTTVSHYITDRQKLDCAVDFVKTLVDQGVSIRTLKAAQEYDEKLTEAIDIVLEDTEDDEEADTSNYYENE
Ga0183755_10109156	3300029448	Marine	MEPTMDSTQIEELWTTVSHYLTERQKLDCAVDFVKTLVDQGVSIKTLKAAQEYDDKLTEAITIVLEDAEDDEYVDTGNYYEDE
Ga0183755_10109462	3300029448	Marine	MDSTQIEEIWTTVSHYIPERQKLDCAVDFVKTLVDQGVESKVLKAAQEYDEKLTEAITIVLEDAEEDEYADTSNYYEDE
Ga0183755_10657551	3300029448	Marine	EEIWTSISHYVPERQKIDCAVDYVKTLIDQGVEHSTLKAAMEYDEKLTEGIKIVLADEVDDSYGLEDNEDENNWHEE
Ga0307488_100059533	3300031519	Sackhole Brine	MHNSMEQEQIEEIWTTVSHYITDRQKLDCAVDFVKTLVDQGVPIRTLKAAQEYDDKLTEAIDIVLEDTEDDEEADTSNYYENE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079334

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences