Metagenome Family F079373

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079373
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	82 residues
Representative Sequence	MKDTPSADPRDQAIRAALRDAATLAAMVVTEFRASYWGAERTVYVATLAAYVTDLGGRLEEAGTRDLVADFGGRRITVRFG
Number of Associated Samples	53
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	68.10 %
% of genes near scaffold ends (potentially truncated)	36.21 %
% of genes from short scaffolds (< 2000 bps)	87.07 %
Associated GOLD sequencing projects	41
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (67.241 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil (79.310 % of family members)
Environment Ontology (ENVO)	Unclassified (72.414 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (97.414 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.28% β-sheet: 12.84% Coil/Unstructured: 56.88%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF02195	ParBc	41.38
PF03288	Pox_D5	1.72
PF08706	D5_N	0.86
PF13191	AAA_16	0.86
PF13601	HTH_34	0.86
PF00355	Rieske	0.86
PF03237	Terminase_6N	0.86
PF08447	PAS_3	0.86
PF10604	Polyketide_cyc2	0.86
PF06439	3keto-disac_hyd	0.86
PF13683	rve_3	0.86
PF13649	Methyltransf_25	0.86
PF00563	EAL	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG3378	DNA primase, phage- or plasmid-associated	Mobilome: prophages, transposons [X]	1.72
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.86
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.86
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.86
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.86

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.10 %
Unclassified	root	N/A	31.90 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.24 %
Unclassified	root	N/A	31.90 %
Viruses	superkingdom	All Organisms → Viruses	0.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.24 %
Unclassified	root	N/A	31.90 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.86 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	57.76 %
Unclassified	root	N/A	31.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.72 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.86 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.86 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	46.55 %
Unclassified	root	N/A	31.90 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.72 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.86 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.86 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	41.38 %
Unclassified	root	N/A	31.90 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.72 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.86 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.86 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	41.38 %
Unclassified	root	N/A	31.90 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	6.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.72 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.86 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.86 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	41.38 %
Unclassified	root	N/A	31.90 %
Propionibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	6.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.72 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.86 %
unclassified Verrucomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales	0.86 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	41.38 %
Unclassified	root	N/A	31.90 %
unclassified Propionibacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → unclassified Propionibacteriaceae	6.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.72 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	0.86 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.86 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	41.38 %
Unclassified	root	N/A	31.90 %
Propionibacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → unclassified Propionibacteriaceae → Propionibacteriaceae bacterium	6.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.72 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	0.86 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908032\|Perma_A_C_ConsensusfromContig128945	Not Available	963	Open in IMG/M
2140918006\|ConsensusfromContig102319	Not Available	672	Open in IMG/M
3300001385\|JGI20193J14888_1010395	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1912	Open in IMG/M
3300001870\|JGI24129J20441_1081211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → unclassified Propionibacteriaceae → Propionibacteriaceae bacterium	622	Open in IMG/M
3300002068\|JGIcombinedJ21913_10069605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1442	Open in IMG/M
3300002068\|JGIcombinedJ21913_10226854	Not Available	618	Open in IMG/M
3300002069\|JGIcombinedJ21912_10082668	All Organisms → cellular organisms → Bacteria	1283	Open in IMG/M
3300002069\|JGIcombinedJ21912_10137455	Not Available	882	Open in IMG/M
3300002069\|JGIcombinedJ21912_10139915	All Organisms → cellular organisms → Bacteria → Terrabacteria group	870	Open in IMG/M
3300002071\|JGIcombinedJ21915_10218718	Not Available	673	Open in IMG/M
3300002071\|JGIcombinedJ21915_10273091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	579	Open in IMG/M
3300002071\|JGIcombinedJ21915_10300800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	543	Open in IMG/M
3300002538\|JGI24132J36420_10127739	All Organisms → cellular organisms → Bacteria → Terrabacteria group	666	Open in IMG/M
3300002538\|JGI24132J36420_10150952	Not Available	592	Open in IMG/M
3300002549\|JGI24130J36418_10003589	All Organisms → cellular organisms → Bacteria	5299	Open in IMG/M
3300002549\|JGI24130J36418_10037740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1348	Open in IMG/M
3300002549\|JGI24130J36418_10131601	Not Available	548	Open in IMG/M
3300002550\|JGI24131J36419_10093333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	757	Open in IMG/M
3300002564\|JGI24134J36421_10015012	All Organisms → cellular organisms → Bacteria	2505	Open in IMG/M
3300002564\|JGI24134J36421_10124324	Not Available	591	Open in IMG/M
3300002569\|JGI24136J36422_10027270	All Organisms → cellular organisms → Bacteria	1781	Open in IMG/M
3300002569\|JGI24136J36422_10032368	Not Available	1608	Open in IMG/M
3300005938\|Ga0066795_10224902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	557	Open in IMG/M
3300005947\|Ga0066794_10008953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2794	Open in IMG/M
3300005947\|Ga0066794_10227034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	561	Open in IMG/M
3300005980\|Ga0066798_10102455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	833	Open in IMG/M
3300006055\|Ga0097691_1012775	All Organisms → cellular organisms → Bacteria	4016	Open in IMG/M
3300006055\|Ga0097691_1021625	All Organisms → cellular organisms → Bacteria → Proteobacteria	2757	Open in IMG/M
3300006055\|Ga0097691_1201004	Not Available	513	Open in IMG/M
3300006055\|Ga0097691_1201541	Not Available	512	Open in IMG/M
3300006640\|Ga0075527_10113623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	754	Open in IMG/M
3300006795\|Ga0075520_1102557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1296	Open in IMG/M
3300006795\|Ga0075520_1178681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	911	Open in IMG/M
3300006795\|Ga0075520_1222458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	793	Open in IMG/M
3300006795\|Ga0075520_1280877	Not Available	687	Open in IMG/M
3300006795\|Ga0075520_1432118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	525	Open in IMG/M
3300006864\|Ga0066797_1026668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2024	Open in IMG/M
3300006950\|Ga0075524_10552569	Not Available	514	Open in IMG/M
3300009029\|Ga0066793_10030962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2975	Open in IMG/M
3300009029\|Ga0066793_10449927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	738	Open in IMG/M
3300014490\|Ga0182010_10035728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2317	Open in IMG/M
3300014494\|Ga0182017_10453467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	789	Open in IMG/M
3300014496\|Ga0182011_10530109	Not Available	755	Open in IMG/M
3300014498\|Ga0182019_10584470	Not Available	782	Open in IMG/M
3300014498\|Ga0182019_10813793	Not Available	669	Open in IMG/M
3300014498\|Ga0182019_10935197	Not Available	626	Open in IMG/M
3300014502\|Ga0182021_11716843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	756	Open in IMG/M
3300014502\|Ga0182021_12094703	Not Available	681	Open in IMG/M
3300014502\|Ga0182021_12224257	Not Available	660	Open in IMG/M
3300014502\|Ga0182021_13464922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → unclassified Propionibacteriaceae → Propionibacteriaceae bacterium	525	Open in IMG/M
3300014839\|Ga0182027_10565740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1229	Open in IMG/M
3300018055\|Ga0184616_10205094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	740	Open in IMG/M
3300025481\|Ga0208079_1003842	All Organisms → cellular organisms → Bacteria	6749	Open in IMG/M
3300025484\|Ga0208587_1014668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2680	Open in IMG/M
3300025484\|Ga0208587_1021987	All Organisms → cellular organisms → Bacteria → Proteobacteria	1966	Open in IMG/M
3300025484\|Ga0208587_1090987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → unclassified Propionibacteriaceae → Propionibacteriaceae bacterium	614	Open in IMG/M
3300025533\|Ga0208584_1022949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1686	Open in IMG/M
3300025533\|Ga0208584_1041746	Not Available	1207	Open in IMG/M
3300025548\|Ga0208716_1023127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1480	Open in IMG/M
3300025548\|Ga0208716_1089608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	616	Open in IMG/M
3300025553\|Ga0208080_1039401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → unclassified Propionibacteriaceae → Propionibacteriaceae bacterium	1320	Open in IMG/M
3300025553\|Ga0208080_1061831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	903	Open in IMG/M
3300025553\|Ga0208080_1119247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	521	Open in IMG/M
3300025581\|Ga0208355_1007839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3751	Open in IMG/M
3300025581\|Ga0208355_1045275	Not Available	1104	Open in IMG/M
3300025619\|Ga0207926_1111830	Not Available	653	Open in IMG/M
3300025650\|Ga0209385_1115895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	844	Open in IMG/M
3300025650\|Ga0209385_1189166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	579	Open in IMG/M
3300025692\|Ga0209744_1090639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1066	Open in IMG/M
3300025692\|Ga0209744_1182011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → unclassified Propionibacteriaceae → Propionibacteriaceae bacterium	654	Open in IMG/M
3300025692\|Ga0209744_1217502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	574	Open in IMG/M
3300025716\|Ga0209746_1216467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	500	Open in IMG/M
3300025725\|Ga0209638_1034478	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2224	Open in IMG/M
3300025725\|Ga0209638_1055835	All Organisms → cellular organisms → Bacteria	1586	Open in IMG/M
3300025725\|Ga0209638_1058913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1522	Open in IMG/M
3300025725\|Ga0209638_1068171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1367	Open in IMG/M
3300025725\|Ga0209638_1071746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1317	Open in IMG/M
3300025725\|Ga0209638_1179357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	656	Open in IMG/M
3300025739\|Ga0209745_1023363	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2577	Open in IMG/M
3300025739\|Ga0209745_1089566	Not Available	1046	Open in IMG/M
3300025739\|Ga0209745_1150119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → unclassified Propionibacteriaceae → Propionibacteriaceae bacterium	728	Open in IMG/M
3300025739\|Ga0209745_1191470	Not Available	614	Open in IMG/M
3300025750\|Ga0209747_1133438	Not Available	806	Open in IMG/M
3300025750\|Ga0209747_1133713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	805	Open in IMG/M
3300025750\|Ga0209747_1136237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → unclassified Propionibacteriaceae → Propionibacteriaceae bacterium	794	Open in IMG/M
3300025750\|Ga0209747_1188745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	631	Open in IMG/M
3300025750\|Ga0209747_1225230	Not Available	555	Open in IMG/M
3300025764\|Ga0209539_1225701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	677	Open in IMG/M
3300025836\|Ga0209748_1099394	Not Available	1122	Open in IMG/M
3300025846\|Ga0209538_1037655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2113	Open in IMG/M
3300025846\|Ga0209538_1320271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → unclassified Propionibacteriaceae → Propionibacteriaceae bacterium	539	Open in IMG/M
3300025852\|Ga0209124_10080811	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1350	Open in IMG/M
3300025852\|Ga0209124_10169158	Not Available	876	Open in IMG/M
3300025857\|Ga0209014_10119474	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1004	Open in IMG/M
3300025857\|Ga0209014_10151016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	850	Open in IMG/M
3300025857\|Ga0209014_10168091	Not Available	786	Open in IMG/M
3300025857\|Ga0209014_10233775	Not Available	620	Open in IMG/M
3300025857\|Ga0209014_10258124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	576	Open in IMG/M
3300025857\|Ga0209014_10265480	Not Available	564	Open in IMG/M
3300025864\|Ga0209429_10136589	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300025864\|Ga0209429_10168480	Not Available	910	Open in IMG/M
3300025864\|Ga0209429_10263037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	676	Open in IMG/M
3300025864\|Ga0209429_10341339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	564	Open in IMG/M
3300025865\|Ga0209226_10036917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2205	Open in IMG/M
3300025865\|Ga0209226_10119789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1191	Open in IMG/M
3300025865\|Ga0209226_10194182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	892	Open in IMG/M
3300025865\|Ga0209226_10272085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	720	Open in IMG/M
3300025865\|Ga0209226_10423122	Not Available	534	Open in IMG/M
3300025878\|Ga0209584_10287775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	631	Open in IMG/M
3300025888\|Ga0209540_10392274	Not Available	760	Open in IMG/M
3300025888\|Ga0209540_10577067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	574	Open in IMG/M
3300025888\|Ga0209540_10638589	Not Available	530	Open in IMG/M
3300025888\|Ga0209540_10677562	Not Available	506	Open in IMG/M
3300030613\|Ga0299915_10465184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	836	Open in IMG/M
3300031726\|Ga0302321_101668346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	737	Open in IMG/M
3300032053\|Ga0315284_11683312	Not Available	661	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.28%
Aquatic	Environmental → Aquatic	1.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.41%
Freshwater	Environmental → Aquatic → Freshwater	0.86%
Sediment	Environmental → Aquatic → Sediment	0.86%
Peat	Environmental → Terrestrial → Peat	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	15.52%
Lake	Environmental → Aquatic → Freshwater → Lake	0.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.86%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	81.03%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	15.52%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.86%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.86%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	79.31%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	9.48%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	4.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	1.72%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	1.72%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.86%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.86%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908032	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_all	Environmental	Open in IMG/M
2140918006	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P1	Environmental	Open in IMG/M
3300001385	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012	Environmental	Open in IMG/M
3300001870	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211	Environmental	Open in IMG/M
3300002068	Barrow Graham LP Ref core NGADG0004-212 (Barrow Graham LP Ref core NGADG0004-212,NGADG0011-311, ASSEMBLY_DATE=20131010)	Environmental	Open in IMG/M
3300002069	Barrow Graham LP Ref core NGADG0002-212 (Barrow Graham LP Ref core NGADG0002-212,NGADG0004-211, ASSEMBLY_DATE=20131010)	Environmental	Open in IMG/M
3300002071	Barrow Graham LP Ref core NGADG0011-312 (Barrow Graham LP Ref core NGADG0011-312,NGADG0011-212, ASSEMBLY_DATE=20131010)	Environmental	Open in IMG/M
3300002538	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-212	Environmental	Open in IMG/M
3300002549	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212	Environmental	Open in IMG/M
3300002550	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-211	Environmental	Open in IMG/M
3300002564	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-312	Environmental	Open in IMG/M
3300002569	Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212	Environmental	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300005947	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190	Environmental	Open in IMG/M
3300005980	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil leachate replicate DNA2013-203	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006640	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300006950	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300018055	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coex	Environmental	Open in IMG/M
3300025481	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025484	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025533	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025548	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025553	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025581	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025619	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025650	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)	Environmental	Open in IMG/M
3300025692	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-311 (SPAdes)	Environmental	Open in IMG/M
3300025716	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-211 (SPAdes)	Environmental	Open in IMG/M
3300025725	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 (SPAdes)	Environmental	Open in IMG/M
3300025739	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-312 (SPAdes)	Environmental	Open in IMG/M
3300025750	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-311 (SPAdes)	Environmental	Open in IMG/M
3300025764	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-312 (SPAdes)	Environmental	Open in IMG/M
3300025836	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 004-21A (SPAdes)	Environmental	Open in IMG/M
3300025846	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-211 (SPAdes)	Environmental	Open in IMG/M
3300025852	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-22A (SPAdes)	Environmental	Open in IMG/M
3300025857	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212 (SPAdes)	Environmental	Open in IMG/M
3300025864	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-212 (SPAdes)	Environmental	Open in IMG/M
3300025865	Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212 (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025888	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)	Environmental	Open in IMG/M
3300030613	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Perma_A_C_04141330	2124908032	Soil	MQDTPSADPRDQAIRAALRDAATLAAMVVTEFRASYWGAERTVYVATLAAYVTDLGGRLEEAGTRDLVADFGGRRITVRFS
P1_C_00517710	2140918006	Soil	MQDTPSADPRDQAIRAALRDAATLAAMVVTEFRASYWGAERTVYVATLAAYVTDLGGFLEEAGTTDLVADFGGRRITVRFS
JGI20193J14888_10103952	3300001385	Arctic Peat Soil	MKDTPSADPRDQAIRAALRDAATLAAMVVTEFRASYWGAERTVYVATLAAYVTDLGGRLEEAGTRDLVADFDGRRITVRFG*
JGI24129J20441_10812112	3300001870	Arctic Peat Soil	MKDTPSADPRDQAIRAALRDASTLAAMVVTEFRASYWGAERIVYVATLAAYVTDLGGRLEEAGTRDLVADFDGRRITVRFG*
JGIcombinedJ21913_100696052	3300002068	Arctic Peat Soil	MKDTPSADPRDQAIRAALRDAATLAAMVVTEFRASYWGAERTVYVATLAAYVTDLGGRLEEAGTRDLVADXGXRRITVRFG*
JGIcombinedJ21913_102268541	3300002068	Arctic Peat Soil	NICSMKDTPSADPRDQAILAALRDAATLAEMVATEFSASYWGAERTVYVATLAAYVTDLGGRLEEAGTRDLVADFDGRRITVRFG*
JGIcombinedJ21912_100826683	3300002069	Arctic Peat Soil	MKDTPSADPRDQAIRAALRDAATLAAMVVTEFRASYWGAERTVYVATLAAYVTDLGGRLEEAGTRDLVADF
JGIcombinedJ21912_101374552	3300002069	Arctic Peat Soil	MQDIPSADPRDQAIRAALRDASTLAAMVVTEFRASYWGAERTVYVATLAAYVTDLGGRLEEAGTRDLVADFGGRRITIRLG*
JGIcombinedJ21912_101399151	3300002069	Arctic Peat Soil	RDTPSADPRDQAILAALRDAATLAEMVATEFSATYWGAERTVYVATLAAYVTDLGGHLEEAGTRDLVADFDGRRITVRFG*
JGIcombinedJ21915_102187181	3300002071	Arctic Peat Soil	VMRYGSSGVVDYENICSMRDTPSADPRDQAILAALRDAATLAEMVATEFSASYWGAERTVYVATLAAYVTDLGGRLEEAGTRDLVADFDGRRITVRFG*
JGIcombinedJ21915_102730912	3300002071	Arctic Peat Soil	MKDTPSADPRDQAILAALRDAATLAEMVATEFTASYWGAERSVYVATLAAYVTDLGGHLEEAGARDLVADFGERRITVRFG*
JGIcombinedJ21915_103008002	3300002071	Arctic Peat Soil	MKDTPSVDPRDQAIRAALRDAATLAAMVVTEFRASYWGAERTVYLATLAAYVTDLGGRLEEAGTRDLVADFGG
JGI24132J36420_101277393	3300002538	Arctic Peat Soil	DQPSADPRDQAIRAALRDASSLAAMVATEFRATYWGTERAVYVATLAEYVTDLGGRLEEAGTRDVIADFGARRITVRFG*
JGI24132J36420_101509521	3300002538	Arctic Peat Soil	SCELGPPVLAVYENICSVQDESSNDPRDQAIRAALRDASTLAAMVVTELTASYWGAERSVYIATLAAYVVDLGGHLEEAGTRDLVADFGARRITVRFG*
JGI24130J36418_100035892	3300002549	Arctic Peat Soil	VQDESSNDPRDQAIRAALRDASTLAAMVVTELTASYWGAERSVYIATLAAYVVDLGGHLEEAGTRDLVADFGARRITVRFG*
JGI24130J36418_100377403	3300002549	Arctic Peat Soil	MRDTPSADPRDQAILAALRDAATLAEMVATEFSATYWGAERTVYVATLAAYVTDLGGHLEEAGTRDLVADFDGRRITVRFG*
JGI24130J36418_101316011	3300002549	Arctic Peat Soil	DTPSADPRDQAILAALRDAATLAEMVATEXXASYWGAERTVYVATLAAYVTDLGGRLEEAGTRDLVADFDGRRITVRFG*
JGI24131J36419_100933331	3300002550	Arctic Peat Soil	MRDTPSADLRDQAILAALRDAATLAEMVATEFSASYWGAERTVYVATLAAYVTDLGGRLEEAGTRDLVADFDGRRITVRFG*
JGI24134J36421_100150123	3300002564	Arctic Peat Soil	MKDTPSADPRDQAIRAALRDAATLAAMVVTELTASYWGAERSVYVATLAAYVIDLGGRLEEAGPKDLVADFGGRRITIRLG*
JGI24134J36421_101243241	3300002564	Arctic Peat Soil	MKDTPSVDPRDQAIRAALRDAATLAAMVVTEFRASYWGAERTVYLATLAAYVTDLGGRLEEAGTRDLVADFGGRRCAMPRPWRRWW*
JGI24136J36422_100272703	3300002569	Arctic Peat Soil	MKDTPSADPRDQAIRAALRDAATLAAMVVTEFRASYWGAERTVYMATLAAYVTDLGGHLEEAGTRDLVADFGGRRITVRFG*
JGI24136J36422_100323681	3300002569	Arctic Peat Soil	VVGYENICSMKDTPSADPRDQAIRAALRDAATLAAMVVTELTASYWGAERSVYVATLAAYVIDLGGRLEEAGPKDLVADFGGRRITIRLG*
Ga0066795_102249022	3300005938	Soil	MKDTPSADPRDQAIRAALRDAATLAAMVVTEFRASYWGAERTVYVATLAAYVTDLGGRLEEAGTRDLVADFGGRRITVRFG*
Ga0066794_100089533	3300005947	Soil	MKDTPSADPRDQAIRAALRDAATLAAMVVTEFRASYWGAERTVYMATLAAYVTDLGGRLEEAGTRDLVADFGQRRITVRFG*
Ga0066794_102270342	3300005947	Soil	MRDTPSADPRDQAILAALRDAATLAEMVATEFSASYWGAERTVYVATLAAYVTDLGGRLEEAGTRDLVADFDGRRITVRFG*
Ga0066798_101024552	3300005980	Soil	MKDTPSADPRDQAIRAALRDAATLAAMVVTEFRASYWGAERTVYMATLAAYVTDLGGHLEEAGTRDLVADF
Ga0097691_10127755	3300006055	Arctic Peat Soil	MKDTPSADPRDQAIRAALRDAATLAAMVVTEFRASYWGAERTVYVATLAAYVTDLGGRLEEAGTRDLVADFGERRITVRFG*
Ga0097691_10216252	3300006055	Arctic Peat Soil	VQDESSNDPRDQAIRAALRDASTLAAMVVTELTASYWGPERSVYIATLAAYVVDLGGRLEEAGPKDLVADVGGRRITIRLG*
Ga0097691_12010042	3300006055	Arctic Peat Soil	CSMRDTPPTDPRDQAIRASLRDASTLAAMVVTELRASYWGAERSVYVETLAAYVVDLGGRLDEAGPRDLVADFGGRRITIRLG*
Ga0097691_12015412	3300006055	Arctic Peat Soil	MQDIPSADPRDQAIRAALRDASTLAAMVVTEFRASYWGAERTVYVATLAAYVVDLGGHLEEAGPRDLIADFAGRRITIRLG*
Ga0075527_101136232	3300006640	Arctic Peat Soil	MKDTPSADPRDQAIRAALRDAATLAAMVVTEFRASYWGTERTVYVATLAAYVTDLGGRLEEAGTRDLVADFGGRRITVRFG*
Ga0075520_11025572	3300006795	Arctic Peat Soil	MKDTPSADPRDQAIRAALRDASTLAAMVVTEFRASYWGAERSVYIATLAAYVADLGGRLDEAGPKDLVADFGGRRITIRLG*
Ga0075520_11786812	3300006795	Arctic Peat Soil	MRDTPSADPRDQAILAALRDAATLAEMVATEFTASYWGAERAVYVATLATYVVDLGGHLEEAGPRDLVADFGGRRITVRLG*
Ga0075520_12224582	3300006795	Arctic Peat Soil	MRDIPSADPRDQAIRAALRDASTLAAMVVTEFRASYWGAERGVYVATLAAYVIDLGGQLEEVGAKDLVADFDGRRITIRLG*
Ga0075520_12808773	3300006795	Arctic Peat Soil	AIRAALRDASTLAAMVVTEFAASYWGAERAIYVATLAAYVVDLGGRLEEAGTRDLVADFGGRRITVRFG*
Ga0075520_14321181	3300006795	Arctic Peat Soil	MRDIPSADPRDQAIRAALRDASTLAAMVVTEFAASYWGAERSVYVATLAEYVTDLGGRLEEVGTRDLVADFDGRRITVRLG*
Ga0066797_10266682	3300006864	Soil	MKDTPSADPRDQAIRAALRDAATLAAMVVTEFRASYWGAERTVYMATLAAYVTDLGGRLEEAGTRDLVADFGERRITVRFG*
Ga0075524_105525692	3300006950	Arctic Peat Soil	PSADPRDQAIRAALRDAATLAAMVVTEFRASYWGAERTVYVATLAAYVTDLGGHLEEAGTRDLVADFGERRITIRFG*
Ga0066793_100309623	3300009029	Prmafrost Soil	MQDEPSADPRDQAIRAALHDAATLAGMVATEFRASYWGAEQAVYAATLAEYVTDLGGRLEEAGTRDLVADFGGRRIPVRFG*
Ga0066793_104499272	3300009029	Prmafrost Soil	MKDTPSADPRDQAIRAALRDASTLAAMVVTELTASYWGAERGIYVATLAAYVVDLGGRLEEAGAKELVANFDGRRITIR
Ga0182010_100357284	3300014490	Fen	MRDTPSVDPRDQAIRAALRDASSLAAMVVTELRASYWGAERAVYVATLEEYVTDLGGRLEEAGTRDLVADFGGRRMTIRFG*
Ga0182017_104534672	3300014494	Fen	MQDTPSADPRDQAILAALRDTATLAEMVATEFQASYWGAERSVYLATLASYVTDLGGHLEEAGPRDLVADFGGRRITARLG*
Ga0182011_105301091	3300014496	Fen	MRDTPSADPRDQAILAALRDAATLAEMVATEFQASYWGAERSVYVATLATYVVDLGGHLEEAGPRDLVADFGGRRITVRLG*
Ga0182019_105844701	3300014498	Fen	TSSTMRGAWSASSCELGPPAVAGYENICSMRDTPSADPRDQAIRAALRDASTLAAMVVTEFAASYWGAERAVYVATLEEYVTDLGGRLEEAGTRDLVADFGGRRITIRFG*
Ga0182019_108137931	3300014498	Fen	LSRYENIRSMQDAPSADPRDQAIKAALRDAASLATMVATEIRATYWGTDRSVYVATLAAYVVDLGGRLEEAGAKELVADFDGRRITIRFG*
Ga0182019_109351971	3300014498	Fen	VGRQPRTWATEGWSCEPAFRALSAYENICSMQDAPSVDPRDQAILAALRDAATLAEMVATEFSASYFGSERSVYVATLAAIVADLGGRLEEAGARDLVADFSGRRIAVRFG*
Ga0182021_117168431	3300014502	Fen	MQDTPSADPRDQAILAALRDAATLAEMVATEFQASYWGAERSVYVATLATYVVDLGGHLEEAGPRDLVADFGGRRITVRLG*
Ga0182021_120947032	3300014502	Fen	VGYENICSMQDLPSADLRDQAIRAALRDASTLAAMVVTELRASYWGAERTVYVATLASYVTDLGGSLEEAGARDLVADIGGRRITIRFG*
Ga0182021_122242571	3300014502	Fen	PGYENICSMQNRPSSHPRDHAIRAALRDASTLAAMVATEFTASYRGSERAVYPATLRGYVTDLGGRLEETRPGELVADFGTRRIALHLG*
Ga0182021_134649221	3300014502	Fen	QAIRAALRDASTLAAMVLTEFRASYFGSERSVYVATLAAIVADLGGRLEEAGQRDLVADFGGRRITVRFG*
Ga0182027_105657401	3300014839	Fen	MQDAPSVDPRDQAILAALRDAATLAEMVATEFSASYFGSERSVYVATLAAIVADLGGRLEEAGARDLVADFSGRRIAVRFG*
Ga0184616_102050942	3300018055	Groundwater Sediment	MKDTPSADPRDQAIRAALRDASTLAAMVASEFRASYWGAERAVYVATLAAYVTDLGGHLEEAGPKDLVADFGGRRVTVRFG
Ga0208079_10038424	3300025481	Arctic Peat Soil	MKDTPSADPRDQAIRAALRDAATLAAMVVTEFRASYWGAERTVYVATLAAYVTDLGGRLEEAGTRDLVADFDGRRITVRFG
Ga0208587_10146683	3300025484	Arctic Peat Soil	MKDTPSADPRDQAIRAALRDAATLAAMVVTEFRASYWGAERTVYVATLAAYVTDLGGRLEEAGTRDLVADFGERRITVRFG
Ga0208587_10219872	3300025484	Arctic Peat Soil	VQDESSNDPRDQAIRAALRDASTLAAMVVTELTASYWGAERSVYIATLAAYVVDLGGHLEEAGTRDLVADFGARRITVRFG
Ga0208587_10909871	3300025484	Arctic Peat Soil	GYHAVRSMQDAPSADLRDQAIRAALRDASTLAAMVVTELTASYWGPERSVYIATLAAYVVDLGGRLEEAGPKDLVADFGGRRITIRLG
Ga0208584_10229491	3300025533	Arctic Peat Soil	GPFEGPPGVVGYENICSMKDTPSADPRDQAIRAALRDAATLAAMVVTEFRASYWGAERTVYVTTLAAYVTDLGGRLEEGGTRDLVADFGGRRITVRLG
Ga0208584_10417463	3300025533	Arctic Peat Soil	MQDIPSADPRDQAIRAALRDASTLAAMVVTEFRASYWGAERTVYVATLAAYVTDLGGRLEEAGTRDLVADFGGRRITIRLG
Ga0208716_10231272	3300025548	Arctic Peat Soil	MKDTPSADPRDQAIRAALRDAATLAAMVVTEFRASYWGAERTVYVATLAAYVTDLGGRLEEAGTRDLVADFGGRRI
Ga0208716_10896081	3300025548	Arctic Peat Soil	MQNVPSADPRDQAIRAALRDASTLAAMVVTELTASYWGAERAVYIATLAAYVVDLGGRLEEAGPEDLVADFGGRRITIRLG
Ga0208080_10394013	3300025553	Arctic Peat Soil	MQDQPSADPRDQAIRAALRDASSLAAMVATEFRATYWGTERAVYVATLAEYVTDLGGRLEEAGTRDVIADFGARRITVRFG
Ga0208080_10618311	3300025553	Arctic Peat Soil	MRDTPSADLRDQAILAALRDAATLAEMVATEFSASYWGAERTVYVATLAAYVTDLGGRLEEAGTRDLVADFDGRRITVRFG
Ga0208080_11192471	3300025553	Arctic Peat Soil	MKDTPSADPRDQAIRAALRDAATLAAMVVTEFRASYWGAERTVYVATLAAYVTDLGGHLEEAGTRDL
Ga0208355_10078393	3300025581	Arctic Peat Soil	MKDTPSADPRDQAIRAALRDAATLAAMVVTEFRASYWGAERTVYMATLAAYVTDLGGRLEEAGTRDLVADFGERRITVRFG
Ga0208355_10452752	3300025581	Arctic Peat Soil	MCSMQDEPSADPRDQAIRAALRDAATLAGMLATEFKATYWGAERTVYVETLAAYVTDLGGHLEEAGTRDLVADFAGRRITVRFG
Ga0207926_11118303	3300025619	Arctic Peat Soil	QNMPSADHRDQAIRAALRDASTLAAMVATEFTATYRGYERTTYVSTLAGYVTDLGGHLDEADHGQLVADFGGRRITVRLG
Ga0209385_11158952	3300025650	Arctic Peat Soil	MKDTPSADPRDQAIRAALRDASTLAAMVVTEFRASYWGAERSVYIATLAAYVADLGGRLDEAGPKDLVADFGGRRITIRLG
Ga0209385_11891662	3300025650	Arctic Peat Soil	MRDIPSADPRDQAIRAALRDASTLAAMVVTEFRASYWGAERGVYVATLAAYVIDLGGQLEEVGAKDLVADFDGRRITIRLG
Ga0209744_10906392	3300025692	Arctic Peat Soil	MKDTPSVDPRDQAIRAALRDAATLAAMVVTEFRASYWGAERTVYLATLAAYVTDLGGRLEEAGTRDLVADFGGRRITVRFG
Ga0209744_11820111	3300025692	Arctic Peat Soil	KDTPSADPRDQAIRAALRDAATLAAMVVTELTASYWGAERSVYVATLAAYVIDLGGRLEEAGPKDLVADFGGRRITIRLG
Ga0209744_12175022	3300025692	Arctic Peat Soil	MQDTPSADPRDQAILAALRDAATLAAMVATEFTASYWGPERTLYVATLATYVTDLGGHLEEVGTRDLVADFGGRRITVRFG
Ga0209746_12164672	3300025716	Arctic Peat Soil	MRDTPSADPRDQAILAALRDAATLAEMVATEFIATYWGAERTVYVATMAAYVTDIGGRLEEAGTRDLVADFDGRRITVRFG
Ga0209638_10344782	3300025725	Arctic Peat Soil	IRAALRDASTLAAMVVTELTASYWGAERSVYIATLAAYVVDLGGHLEEAGTRDLVADFGARRITVRFG
Ga0209638_10558353	3300025725	Arctic Peat Soil	MKDTPSADPRDQAIRAALRDASTLAAMVVTEFRASYWGAERIVYVATLAAYVTDLGGRLEEAGTRDLVADFDGRRITVRFG
Ga0209638_10589132	3300025725	Arctic Peat Soil	MKDIPSADPRDHAIRAALRDAATMAAMVATELTASYWGVERAIYVATLAAYVVDLGGHLEEAGTRDLVADFGERRITVRFG
Ga0209638_10681711	3300025725	Arctic Peat Soil	MRDTPSADPRDQAILAALRDAATLAEMVATEFSASYWGAERTVYVATLAAYVTDLGGRLEEAGTRDLVADFDGRRITVRFG
Ga0209638_10717461	3300025725	Arctic Peat Soil	MRDTPSADPRDQAIRAALRDASTLAAMVVTEFTASYWGAERAVYVATLAEYVTDLGGRLEEVGTRDLVADFGGRRITVRLG
Ga0209638_11793571	3300025725	Arctic Peat Soil	MRDTPSTDPRDQAIRAALRDASTLAAMVVTELRASYWGAERSVYVETLAAYVVDLGGRLDEAGPRDLVADFGGRRITIR
Ga0209745_10233632	3300025739	Arctic Peat Soil	MRVTPSADPRDQAIRAALRDASTLAAMVVTELAASYWGAERSVYMATLAAYVVDLGGRLEEAGPKDLVADFGGRRITIRLG
Ga0209745_10895661	3300025739	Arctic Peat Soil	AIRAALRDAATLAAMVVTEFSASYGGAERTVYVATLAAYVTDLGGHLEEAGTRDLVADFDGRRITVPFG
Ga0209745_11501192	3300025739	Arctic Peat Soil	RIPSGPGPFEGPPGVVGYENICSMKDTPSADPRDQAIRAALRDAATLAAMVVTELTASYWGAERSVYVATLAAYVIDLGGRLEEAGPKDLVADFGGRRITIRLG
Ga0209745_11914701	3300025739	Arctic Peat Soil	RIPSGPGPFEGPPGVVGYENICSMKDTPSADPRDQAIRAALRDAATLAAMVVTEFRASYWGAERTVYVATLAAYVTDLGGRLEEAGTRDLVADFDGRRITVRFG
Ga0209747_11334382	3300025750	Arctic Peat Soil	QAIRAALRDAATLAAMVVTEFRASYWGAERTVYVATLAAYVTDLGGRLEEAGTRDLVADFGERRITVRFG
Ga0209747_11337131	3300025750	Arctic Peat Soil	MKDTPSADPRDQAIRAALRDAATLAAMVVTELTASYWGAERSVYMATLAAYVVDLGGRLEEAGPKDLVADFGGRRITIRLG
Ga0209747_11362372	3300025750	Arctic Peat Soil	MKDTPSADPRDQAIRAALRDAATLAAMVVTELTASYWGAERSVYVATLAAYVIDLGGRLEEAGPKDLVADFGGRRITIRLG
Ga0209747_11887452	3300025750	Arctic Peat Soil	MKDTPSADPRDQAIRAALRDAATLAAMVVTEFRASYWGTERAVYVATLAAYVTDLGGRLEEAGTRDLVADFGGRRITVRFG
Ga0209747_12252301	3300025750	Arctic Peat Soil	PSGPGPFEGPPGVVGYENICSMKDTPSADPRDQAIRAALRDAATLAAMVVTEFRASYWGAERTVYMATLAAYVTDLGGRLEEAGTRDLVADFDGRRITVRFG
Ga0209539_12257011	3300025764	Arctic Peat Soil	MKDTPSADPRDQAIRAALRDAATLAAMVVTEFSASYGGAERTVYVATLAAYVTDLGGHLEEAGTRDLVADFDGRRITVPFG
Ga0209748_10993943	3300025836	Arctic Peat Soil	MQDQPSADPRDQAIRAALRDASSLAAMVATEFGATYWGTERAVYVATLAEYVTDLGGRLEEAGTRDVIADFGARRITVRFG
Ga0209538_10376551	3300025846	Arctic Peat Soil	PSADPRDQAIRAALRDAATLAAMVVTEFRASYWGAERTVYVATLAAYVTDLGGRLEEAGTRDLVADFGERRITVRFG
Ga0209538_13202711	3300025846	Arctic Peat Soil	VPSADPRDQAIRAALRDASTLAAMVVTELTASYWGAERAVYIATLAAYVVDLGGRLEEAGPEDLVADFGGRRITIRLG
Ga0209124_100808112	3300025852	Arctic Peat Soil	MQDTPSADPCDQVIDAALRDVATLAGMVATEFLASYWGGEWTIYVATLAEYVTDLGGRLEEAGTRHLVADFGGRRITIRFG
Ga0209124_101691583	3300025852	Arctic Peat Soil	DQAIRAALRDASTLAAMVVTEFRASYWGAERTVYVATLAAYVTDLGGRLEEAGTRDLVADFGGRRITIRLG
Ga0209014_101194742	3300025857	Arctic Peat Soil	MCSMQDEPSADPRDQAIRAALRDAATLAGMLATEFKATYWGAERAVYVETLAAYVTDLGGHLEEAGTRDLVADFAGRRITVRFG
Ga0209014_101510162	3300025857	Arctic Peat Soil	MKDTPSADPRDQAIRAALRDASTLAAMVVTEFRASYWGAERSVYIATLAAYVADLGGRLDEAGPKDLVADFGGRRI
Ga0209014_101680911	3300025857	Arctic Peat Soil	MKDTSSADPRDQAIRAALRDAATLAAMVVTELRASYWGAERTVYVATLAAYVTDLGGHLEEVGTRDLVADFGGRRITIRFG
Ga0209014_102337751	3300025857	Arctic Peat Soil	MKDTRSADPRDQAIQAALRDAATLAAMVVTEFTASYWGAEPAVYVPTLAAYVTDLGGHLEEAGTRDLVAAFDGRRITVRFGTVSGAR
Ga0209014_102581242	3300025857	Arctic Peat Soil	MRDTPSADPRDQAIRAALRDASTLAAMVVTEFTASYWGAERAVYVATLAEYVTDLGGRLEEVGTRDLVADFGGHRITVRLG
Ga0209014_102654801	3300025857	Arctic Peat Soil	DTPSADPRDQAILAALRDAATLAEMVATEFSASYWGAERTVYVATLAAYVTDLGGRLEEAGTRDLVADFDGRRITVRFG
Ga0209429_101365891	3300025864	Arctic Peat Soil	MQNVPSADPRDQAIRAALRDASTLAAMVVTELTASCWGTERAVYVATLAAYVIDLGGCLEEAGPKDLVADFGGRRITIRLG
Ga0209429_101684801	3300025864	Arctic Peat Soil	RCPCVVGYENICSMQDASSADPRDQAIRAALRDASTLAAMVVTELTASYWGAERSVYVATLTAYVIDLGGRLEEAGPKDLVADFGGRRITIRLG
Ga0209429_102630371	3300025864	Arctic Peat Soil	MKDTPSADPRDQAIRAALRDAATLAAMVVTEFRASYWGAERTVYVATLAAYVTDLGGHLEEAGTRDLVADFGERRITIRFG
Ga0209429_103413392	3300025864	Arctic Peat Soil	MWSCEEGPPGIVGYENICSMKDTPSADPRDQAIRAALRDAATLAAMVVTEFRASYWGAERTVYMATLAAYVTDLGGRLEEAGTRDLVADFGGRRIT
Ga0209226_100369174	3300025865	Arctic Peat Soil	MQDEPSADPRDQAIRAALRDASSLAAMVATEFGATYWGAERAVYVATLAEYVTDLGGRLEEAGTRDVIADFGARRITVRFG
Ga0209226_101197893	3300025865	Arctic Peat Soil	MKDTPSADPRDQAIRAALRDAATLAAMVVTEFRASYWGAERTVYVTTLAAYVTDLGGHLEEVGTRDLVADFGERRITVRFG
Ga0209226_101941821	3300025865	Arctic Peat Soil	MQDTPSADPRDQAILAALRDAATLAEMVATEFTASYWGPERAVYLATLATYVTDLGGHLEEAGTRDLVADFGERRITVRFG
Ga0209226_102720852	3300025865	Arctic Peat Soil	MKDTPSADPRDQAILAALRDAATLAEMVATEFTASYWGAERSVYVATLAAYVTDLGGHLEEAGARDLVADFGERRITVRFG
Ga0209226_104231221	3300025865	Arctic Peat Soil	ICSVQDESSNDPRDQAIRAALRDASTLAAMVVTELTASYWGAERSVYIATLAAYVVDLGGHLEEAGTRDLVADFGARRITVRFG
Ga0209584_102877751	3300025878	Arctic Peat Soil	MKDTPSADPRDQAIRAALRDAATLAEMVATEFQASYWGAERSVYVATLATYVVDLGGHLEEAGPRDLVADFGGRRIT
Ga0209540_103922742	3300025888	Arctic Peat Soil	MQDQPSADPRDQAIRAALRDASSLAAMVATEFGATYWGAERAVYVATLAEYVTDLGGRLEEAGTRDVIADFGARRITVRFG
Ga0209540_105770671	3300025888	Arctic Peat Soil	MRDTPSADPRDQAIRAALRDASTLAAMVVTEFAASYWGAERAVYVATLAEYVTDLGGRLEEVGTRDLVADFDGRRITV
Ga0209540_106385891	3300025888	Arctic Peat Soil	AIRAALRDASTLAAMVVTEFRASYWGAERTVYVATLAAYVVDLGGHLEEAGPRDLIADFAGRRITIRLG
Ga0209540_106775621	3300025888	Arctic Peat Soil	MKDTPSADPRDQAIRAALRDAATLAAMVVTEFRASYWGAERTVYVTTLAAYVTDLGGRLEEGGTRDLVADFGGRRITVRLG
Ga0299915_104651842	3300030613	Soil	MRDTPSADPRDHAIRAALRDASTLASMVATEFTASYRGAERTVYVATLAAYVTDLGGRLEEEGTRDLVADFGGRRITVRLG
Ga0302321_1016683462	3300031726	Fen	MRDTPSADPRDQAILAALRDASTLAAMVVTELTASYWGTERATYVATLAAYVTDLGGRLEEAGPKDLVADFGGRRITIRFG
Ga0315284_116833121	3300032053	Sediment	VLSCEKSLPGVAGYENICAMQNAPSADPRDQAIRAALQDASTLASMVATDFTASYRGADRTAYLATLAGDVTDLGGRLEEVERGELVADFGGRQITVRFG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079373

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences