Metagenome / Metatranscriptome Family F079409

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079409
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	58 residues
Representative Sequence	MAKYTLTKAGKDDKIFKEGFTISNTKPRYRIGSKETADKFNKGGVSIIPLSGNKKL
Number of Associated Samples	50
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	66.09 %
% of genes near scaffold ends (potentially truncated)	53.04 %
% of genes from short scaffolds (< 2000 bps)	86.96 %
Associated GOLD sequencing projects	33
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.15

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (74.783 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (100.000 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (100.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.81% β-sheet: 0.00% Coil/Unstructured: 76.19%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.15
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.15
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF00145	DNA_methylase	3.48
PF12161	HsdM_N	3.48
PF09556	RE_HaeIII	2.61
PF12844	HTH_19	1.74
PF05930	Phage_AlpA	1.74
PF09504	RE_Bsp6I	1.74
PF00589	Phage_integrase	1.74
PF01555	N6_N4_Mtase	0.87
PF04471	Mrr_cat	0.87
PF11074	DUF2779	0.87
PF13489	Methyltransf_23	0.87
PF11463	R-HINP1I	0.87
PF05559	DUF763	0.87
PF05656	DUF805	0.87
PF06114	Peptidase_M78	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	3.48
COG3311	DNA-binding transcriptional regulator AlpA	Transcription [K]	1.74
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.87
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.87
COG1415	Uncharacterized conserved protein, DUF763 domain	Function unknown [S]	0.87
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.87
COG3152	Uncharacterized membrane protein YhaH, DUF805 family	Function unknown [S]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.78 %
All Organisms	root	All Organisms	25.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.78 %
cellular organisms	root	All Organisms → cellular organisms	25.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.78 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	24.35 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	13.91 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.87 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.48 %
Candidatus Woesearchaeota	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota	0.87 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.78 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.61 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.61 %
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	1.74 %
Alphaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis	1.74 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.87 %
Gammaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis	0.87 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.78 %
Alphaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_39_49	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_39_49	2.61 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	2.61 %
Halieaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae	1.74 %
SAR116 cluster	clade	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster	1.74 %
Candidatus Thioglobus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus	0.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.87 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.78 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	2.61 %
Alphaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_39_49	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_39_49	2.61 %
unclassified Halieaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → unclassified Halieaceae	1.74 %
Candidatus Puniceispirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum	1.74 %
unclassified Candidatus Thioglobus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus → unclassified Candidatus Thioglobus	0.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.87 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.78 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2.61 %
Alphaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_39_49	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_39_49	2.61 %
unclassified Candidatus Puniceispirillum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → unclassified Candidatus Puniceispirillum	1.74 %
marine gamma proteobacterium HTCC2080	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → unclassified Halieaceae → marine gamma proteobacterium HTCC2080	1.74 %
Candidatus Thioglobus sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus → unclassified Candidatus Thioglobus → Candidatus Thioglobus sp.	0.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.87 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.78 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2.61 %
Alphaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_39_49	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_39_49	2.61 %
Candidatus Puniceispirillum sp. TMED52	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → unclassified Candidatus Puniceispirillum → Candidatus Puniceispirillum sp. TMED52	1.74 %
marine gamma proteobacterium HTCC2080	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → unclassified Halieaceae → marine gamma proteobacterium HTCC2080	1.74 %
Candidatus Thioglobus sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus → unclassified Candidatus Thioglobus → Candidatus Thioglobus sp.	0.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.87 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300016732\|Ga0182057_1248533	Not Available	503	Open in IMG/M
3300016751\|Ga0182062_1135810	Not Available	996	Open in IMG/M
3300016771\|Ga0182082_1135651	Not Available	594	Open in IMG/M
3300016781\|Ga0182063_1013630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	753	Open in IMG/M
3300016781\|Ga0182063_1384913	Not Available	565	Open in IMG/M
3300016787\|Ga0182080_1672892	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300017818\|Ga0181565_10092626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → unclassified Candidatus Puniceispirillum → Candidatus Puniceispirillum sp. TMED52	2148	Open in IMG/M
3300017818\|Ga0181565_10191512	Not Available	1410	Open in IMG/M
3300017818\|Ga0181565_10268325	Not Available	1154	Open in IMG/M
3300017818\|Ga0181565_10274879	Not Available	1137	Open in IMG/M
3300017818\|Ga0181565_10288676	Not Available	1104	Open in IMG/M
3300017818\|Ga0181565_10324006	Not Available	1030	Open in IMG/M
3300017818\|Ga0181565_10377976	Not Available	938	Open in IMG/M
3300017818\|Ga0181565_10428686	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300017818\|Ga0181565_10476188	Not Available	814	Open in IMG/M
3300017818\|Ga0181565_10719248	Not Available	632	Open in IMG/M
3300017818\|Ga0181565_10820048	Not Available	584	Open in IMG/M
3300017818\|Ga0181565_10852393	Not Available	570	Open in IMG/M
3300017818\|Ga0181565_10874314	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300017949\|Ga0181584_10129331	Not Available	1707	Open in IMG/M
3300017949\|Ga0181584_10315746	Not Available	996	Open in IMG/M
3300017951\|Ga0181577_10119569	All Organisms → cellular organisms → Bacteria → Proteobacteria	1811	Open in IMG/M
3300017951\|Ga0181577_10379126	Not Available	903	Open in IMG/M
3300017952\|Ga0181583_10108897	Not Available	1887	Open in IMG/M
3300017952\|Ga0181583_10563325	Not Available	690	Open in IMG/M
3300017952\|Ga0181583_10905783	Not Available	513	Open in IMG/M
3300017952\|Ga0181583_10931525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus → unclassified Candidatus Thioglobus → Candidatus Thioglobus sp.	504	Open in IMG/M
3300017956\|Ga0181580_10023015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → unclassified Halieaceae → marine gamma proteobacterium HTCC2080	4881	Open in IMG/M
3300017956\|Ga0181580_10411940	Not Available	898	Open in IMG/M
3300017957\|Ga0181571_10107774	All Organisms → cellular organisms → Bacteria	1869	Open in IMG/M
3300017957\|Ga0181571_10153337	Not Available	1516	Open in IMG/M
3300017957\|Ga0181571_10215859	Not Available	1237	Open in IMG/M
3300017957\|Ga0181571_10662404	Not Available	626	Open in IMG/M
3300017958\|Ga0181582_10139519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1703	Open in IMG/M
3300017962\|Ga0181581_10029719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3989	Open in IMG/M
3300017962\|Ga0181581_10249920	Not Available	1155	Open in IMG/M
3300017962\|Ga0181581_10327846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_39_49	977	Open in IMG/M
3300017962\|Ga0181581_10563336	Not Available	697	Open in IMG/M
3300017964\|Ga0181589_10032995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → unclassified Halieaceae → marine gamma proteobacterium HTCC2080	3964	Open in IMG/M
3300017964\|Ga0181589_10588410	Not Available	709	Open in IMG/M
3300017964\|Ga0181589_10771424	Not Available	598	Open in IMG/M
3300017967\|Ga0181590_10279743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1221	Open in IMG/M
3300017967\|Ga0181590_10415535	Not Available	953	Open in IMG/M
3300017967\|Ga0181590_10496313	Not Available	851	Open in IMG/M
3300017968\|Ga0181587_10300482	All Organisms → cellular organisms → Bacteria → Proteobacteria	1082	Open in IMG/M
3300017968\|Ga0181587_10518026	Not Available	772	Open in IMG/M
3300017969\|Ga0181585_10708808	Not Available	657	Open in IMG/M
3300017969\|Ga0181585_10861633	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300017985\|Ga0181576_10062536	Not Available	2525	Open in IMG/M
3300017985\|Ga0181576_10104383	Not Available	1903	Open in IMG/M
3300017985\|Ga0181576_10231074	Not Available	1198	Open in IMG/M
3300017985\|Ga0181576_10456551	Not Available	790	Open in IMG/M
3300017985\|Ga0181576_10694304	Not Available	609	Open in IMG/M
3300017985\|Ga0181576_10781659	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300017986\|Ga0181569_10140305	Not Available	1714	Open in IMG/M
3300017986\|Ga0181569_10244061	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1255	Open in IMG/M
3300017986\|Ga0181569_10560914	Not Available	767	Open in IMG/M
3300017986\|Ga0181569_10811731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_39_49	613	Open in IMG/M
3300018048\|Ga0181606_10370792	Not Available	772	Open in IMG/M
3300018049\|Ga0181572_10486954	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300018410\|Ga0181561_10410593	Not Available	614	Open in IMG/M
3300018417\|Ga0181558_10446872	Not Available	679	Open in IMG/M
3300018418\|Ga0181567_10002748	All Organisms → cellular organisms → Bacteria	13093	Open in IMG/M
3300018418\|Ga0181567_10053278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → unclassified Candidatus Puniceispirillum → Candidatus Puniceispirillum sp. TMED52	2832	Open in IMG/M
3300018418\|Ga0181567_10262496	Not Available	1169	Open in IMG/M
3300018418\|Ga0181567_10551644	Not Available	748	Open in IMG/M
3300018418\|Ga0181567_10553352	Not Available	747	Open in IMG/M
3300018418\|Ga0181567_10764726	Not Available	613	Open in IMG/M
3300018421\|Ga0181592_10477391	Not Available	866	Open in IMG/M
3300018421\|Ga0181592_10647509	Not Available	711	Open in IMG/M
3300018421\|Ga0181592_10650763	Not Available	709	Open in IMG/M
3300018424\|Ga0181591_10080004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2701	Open in IMG/M
3300018424\|Ga0181591_10298046	Not Available	1230	Open in IMG/M
3300018424\|Ga0181591_10892601	Not Available	610	Open in IMG/M
3300018426\|Ga0181566_10661435	Not Available	721	Open in IMG/M
3300018426\|Ga0181566_10805461	Not Available	641	Open in IMG/M
3300018428\|Ga0181568_10055151	All Organisms → cellular organisms → Bacteria → Proteobacteria	3366	Open in IMG/M
3300018876\|Ga0181564_10514999	Not Available	640	Open in IMG/M
3300019262\|Ga0182066_1058017	Not Available	704	Open in IMG/M
3300019262\|Ga0182066_1153218	Not Available	529	Open in IMG/M
3300019262\|Ga0182066_1179903	Not Available	545	Open in IMG/M
3300019262\|Ga0182066_1191254	Not Available	518	Open in IMG/M
3300019274\|Ga0182073_1584236	Not Available	561	Open in IMG/M
3300019276\|Ga0182067_1625712	Not Available	527	Open in IMG/M
3300020207\|Ga0181570_10015144	All Organisms → cellular organisms → Bacteria	4965	Open in IMG/M
3300020207\|Ga0181570_10151850	Not Available	1266	Open in IMG/M
3300020207\|Ga0181570_10382552	Not Available	679	Open in IMG/M
3300022934\|Ga0255781_10208681	Not Available	953	Open in IMG/M
3300022937\|Ga0255770_10011562	All Organisms → cellular organisms → Bacteria → Proteobacteria	6750	Open in IMG/M
3300022937\|Ga0255770_10349475	Not Available	662	Open in IMG/M
3300022937\|Ga0255770_10461285	Not Available	534	Open in IMG/M
3300022939\|Ga0255754_10148048	Not Available	1230	Open in IMG/M
3300023081\|Ga0255764_10374136	Not Available	626	Open in IMG/M
3300023084\|Ga0255778_10422562	Not Available	568	Open in IMG/M
3300023105\|Ga0255782_10062326	Not Available	2048	Open in IMG/M
3300023105\|Ga0255782_10366223	Not Available	654	Open in IMG/M
3300023108\|Ga0255784_10298910	Not Available	802	Open in IMG/M
3300023110\|Ga0255743_10113776	Not Available	1591	Open in IMG/M
3300023110\|Ga0255743_10215354	Not Available	1042	Open in IMG/M
3300023110\|Ga0255743_10245856	Not Available	952	Open in IMG/M
3300023115\|Ga0255760_10284378	Not Available	825	Open in IMG/M
3300023116\|Ga0255751_10250751	Not Available	953	Open in IMG/M
3300023116\|Ga0255751_10320811	Not Available	799	Open in IMG/M
3300023116\|Ga0255751_10378890	Not Available	707	Open in IMG/M
3300023119\|Ga0255762_10006579	All Organisms → cellular organisms → Bacteria	8495	Open in IMG/M
3300023119\|Ga0255762_10570163	Not Available	515	Open in IMG/M
3300023170\|Ga0255761_10044525	All Organisms → cellular organisms → Bacteria	3090	Open in IMG/M
3300023172\|Ga0255766_10310836	Not Available	798	Open in IMG/M
3300023175\|Ga0255777_10336994	Not Available	838	Open in IMG/M
3300023176\|Ga0255772_10347625	Not Available	766	Open in IMG/M
3300023176\|Ga0255772_10405439	Not Available	685	Open in IMG/M
3300023178\|Ga0255759_10784629	Not Available	514	Open in IMG/M
3300023180\|Ga0255768_10081714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_39_49	2234	Open in IMG/M
3300023180\|Ga0255768_10340998	Not Available	821	Open in IMG/M
3300023180\|Ga0255768_10494767	Not Available	621	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	100.00%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	100.00%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	100.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300016732	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101403AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016751	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101408BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016771	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071412BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016781	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101409CT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016787	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071411AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017957	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017958	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017962	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017964	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017968	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017985	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017986	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018048	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018049	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018410	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018417	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018418	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018426	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018428	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018876	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019262	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101412AT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019274	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071405CT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019276	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101413AT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020207	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101406AT metaG (spades assembly)	Environmental	Open in IMG/M
3300022934	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG	Environmental	Open in IMG/M
3300022937	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG	Environmental	Open in IMG/M
3300022939	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG	Environmental	Open in IMG/M
3300023081	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG	Environmental	Open in IMG/M
3300023084	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG	Environmental	Open in IMG/M
3300023105	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG	Environmental	Open in IMG/M
3300023108	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG	Environmental	Open in IMG/M
3300023110	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG	Environmental	Open in IMG/M
3300023115	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG	Environmental	Open in IMG/M
3300023116	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG	Environmental	Open in IMG/M
3300023119	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG	Environmental	Open in IMG/M
3300023170	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG	Environmental	Open in IMG/M
3300023172	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG	Environmental	Open in IMG/M
3300023175	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG	Environmental	Open in IMG/M
3300023176	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG	Environmental	Open in IMG/M
3300023178	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG	Environmental	Open in IMG/M
3300023180	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0182057_12485332	3300016732	Salt Marsh	MVKYTLTKAGKKDKIYKEGYTISNTKPRYRIGSKETADKFNKGGVQIIAISSRKK
Ga0182062_11358103	3300016751	Salt Marsh	GIVPKVLKQEVIMAKYTLIKAGKDDKIFKEGFTISKTKPRYRIGSKETADKFNKGGVSIIPLSGNKKL
Ga0182082_11356512	3300016771	Salt Marsh	MAKYTLTVADKDDKIYKEGFTITNTKPRYRIGSKETADKFNKGGVQIIAISSRKK
Ga0182063_10136301	3300016781	Salt Marsh	TKAGKEDKIFKEGFTLSNTKPRYRIGTKETADKFNKGGVQIITISSRKKEC
Ga0182063_13849132	3300016781	Salt Marsh	MAKYTLIKAGKDDKIFKEGFTISNTKPRYRIGSKETADKFNKGGVSIIPLSGNKKL
Ga0182080_16728923	3300016787	Salt Marsh	GIVPKVLKQEVIMTKYTLTIAGKDDKIYKEGFAVSNTKPRYRIGSKETADKFNKGGVSIIPLSRKKEL
Ga0181565_100926262	3300017818	Salt Marsh	MAKYTLTIAGKDDKIYKEGFTISNTKPRYRIGSKETADKFNKGGAQVIPIESKK
Ga0181565_101915122	3300017818	Salt Marsh	MAKYTLTKAGKDDKIFKEGFTISNTKPRYRIGSKETADKFNKGGAQVIPVESKNKG
Ga0181565_102683251	3300017818	Salt Marsh	MAKYTLTKAGKDDKIFKEDFTISNTKPRYRIGSKETADKFNKGGCQIIPLSRK
Ga0181565_102748792	3300017818	Salt Marsh	VPKVLKQEVIMAKYTLIKAGKDDKIFKEGFTISKTKPRYRIGSKETADKFNKGGVSIIPLSGNKKL
Ga0181565_102886761	3300017818	Salt Marsh	MAKYTLTKAGKQDKIFKEGFIISNTKQRYRIGSKETADKFNKGGVQIITISSRKR
Ga0181565_103240062	3300017818	Salt Marsh	MTKDTLTIAGNNDKIYKEGFNVSNTKPRYRIGSKETADKFNKGGVSIIPLSRKKEL
Ga0181565_103779761	3300017818	Salt Marsh	MAKYTLIKAGKDDKIFKEGFIISNTKPRYRIGSKETADKFNKGGVSIIP
Ga0181565_104286863	3300017818	Salt Marsh	MAKYTLTKAGKKDKIFKEGYTISNTKPRYRIGSKETADKFNKGGVQIIAISSRKK
Ga0181565_104761882	3300017818	Salt Marsh	MVPKVLKQEVKMAKYTLTKAGKDDEIFKEGFTISNIKPRYRIGSKETADKFNKGGAQVIPVESKK
Ga0181565_107192482	3300017818	Salt Marsh	MAKYTWSIAGKDDKIFKEGFTLSNTKPRYRIGSKETADKFNKGGAQVIPIESIDKVKER
Ga0181565_108200481	3300017818	Salt Marsh	MAKYTWSIAGKDDKIFKEGFTISNTNPRYRIGSKETADKFNKGGAQVIPIESKK
Ga0181565_108523932	3300017818	Salt Marsh	MAKFTWSIAGKNDKIFKEGFTISNTKPRYRIGSKETADKFNKGGVSIIPLLRKIEP
Ga0181565_108743142	3300017818	Salt Marsh	MAKYTLTIAGKDDKIFKEGFTVSNTKPRYRIGSKETADKFNSGGVSVIPLSRKGKNHK
Ga0181584_101293313	3300017949	Salt Marsh	MTKYTLTIAGNNDKIYKEGFNVSNTKPRYRIGSKETADKFNKGGVSIIPLSRKKEL
Ga0181584_103157463	3300017949	Salt Marsh	MAKYTLIKAGKDDKIFKEGFIISNTKPRYRIGSKETADKFNKGGVSIIPLLGKIKP
Ga0181577_101195693	3300017951	Salt Marsh	MAKFTWSIAGKDDKIFKEGFTISNTKPRYRIGSKETADKFNKGGVSIIPLSGNKKL
Ga0181577_103791261	3300017951	Salt Marsh	KEGFIISNTKPRYRIGSKETADKFNKGGVSIIPLLGKIKP
Ga0181583_101088973	3300017952	Salt Marsh	MAKYTWSIAGKDDKIYKEGFTISNTKPRYRIGSKETADKFNKGGAQVIPIEPKNKI
Ga0181583_105633252	3300017952	Salt Marsh	MAKYTLNKAGKDDKIFKKGFSLSNTKPRYRIGSKETADKFNKGGAQVIPIESKDKVKE
Ga0181583_109057831	3300017952	Salt Marsh	DKIYKEGFIISNTKPRYRIGSKETADKFNKGGVSIIPLLGKIKP
Ga0181583_109315251	3300017952	Salt Marsh	MAKYTLTKAGKDDEIFKEGFTISNIKPRYRIGSKETADKFNKGGAQVIPVESKNKG
Ga0181580_100230156	3300017956	Salt Marsh	MAKYTLTIAGKDDKIYKEGFTISNTKPRYRIGSKETADKFNKGGAQVIPIESKKV
Ga0181580_104119401	3300017956	Salt Marsh	MAKFTWSIAGKDDKIFKEGFIISNTKPRYRIGSKETADKFNKGGVSIIPLLGKIKP
Ga0181571_101077741	3300017957	Salt Marsh	AGKDDKIFKEGFIISNTKPRYRIGSKETADKFNKGGVSIIPLLGKIKP
Ga0181571_101533371	3300017957	Salt Marsh	AGKDDKIYKEGFTISNTKPRYRIGSKETADKFNKGGAQVIPIESKK
Ga0181571_102158594	3300017957	Salt Marsh	MTKYTLTIAGNDDKIYKEGFTVSNTKPRYRIGSKETADKFNKGGVSIIPLSRKKEL
Ga0181571_106624041	3300017957	Salt Marsh	MAKYTLTKAGKDDEIFKEGFTISNIKPRYRIGSKETADKFNKGGAQVIPVESKK
Ga0181582_101395193	3300017958	Salt Marsh	VPKVLKQEVIMAKYTLTKAGKEDKIFKEGYTISNTKPRYRIGSKETADKFNKGGVQIIAISSRKK
Ga0181581_100297196	3300017962	Salt Marsh	VRLGIVPKVLKQEVIMAKYTLTKAGKEDKIFKEGFTLSNTKPRYRIGTKETADKFNKGGVQIITISSRKKEC
Ga0181581_102499203	3300017962	Salt Marsh	MAKYTWSIAGKDDKIFKEGFTLSNTKPRYRIGSKETADKFNKGGVSIIPLSGNKKL
Ga0181581_103278461	3300017962	Salt Marsh	MAKYTWSIAGKDDKIFKEGFTISNTKPRYRIGSKETADKFNKGGAQVIPIESKDKVKKNV
Ga0181581_105633361	3300017962	Salt Marsh	MAKYTWSIAGKDDKIYKEGFTISNTKPRYRIGSKETADKFNKGGAQVIPIEPKK
Ga0181589_100329952	3300017964	Salt Marsh	MAKYTCSIAGKDVKTFKEGFTISNTKPRYRIGSKETADKFNKGGAQVIPIESKK
Ga0181589_105884102	3300017964	Salt Marsh	MAKFTWSIAGKNDKIFKEGFTISNIKPRYRIGSKETADKFNKDGVSIIPLSGN
Ga0181589_107714242	3300017964	Salt Marsh	VPKVLKQEVIMAKFTWSIAGKDDKIFKEGFTISNTKPRYRIGSKETADKFNKGGVSIIPLSGNKKL
Ga0181590_102797433	3300017967	Salt Marsh	MAKYTWSIAGKDDKIYKEGFTLSNTKPRNRIGSKETADKFNKGGVQIIAISSRKK
Ga0181590_104155353	3300017967	Salt Marsh	MTKYTLTIAGKDDKIYKEGFTVSNTKPRYRIGSKETADKFNKGGVSIIPLSRKKEL
Ga0181590_104963131	3300017967	Salt Marsh	KYTLIKAGKDDKIFKEGFIISNTKPRYRIGSKETADKFNKGGVSIIPLLGKIKP
Ga0181587_103004822	3300017968	Salt Marsh	MTKYTLIIAGKDDKIYKEGFAVSNTKPRYRIGSKETADKFNKGGVSIIPLSRKKEL
Ga0181587_105180262	3300017968	Salt Marsh	VPKVLKQEVIMAKYTLIKAGKDDKIFKEGFIISNTKPRYRIGSKETADKFNKGGVSIIPLSGNKKL
Ga0181585_107088082	3300017969	Salt Marsh	VPKVLKQEVIMAKFTWSIAGKNDKIFKEGFTISNIKPRYRIGSKETADKFNKDGVSIIPLSGNKKL
Ga0181585_108616332	3300017969	Salt Marsh	MAKYTWSIAGKDDKIFKEGFTVSNTKPRYRIGSKETADKFNSGGVSVIPLSRKGKNHK
Ga0181576_100625365	3300017985	Salt Marsh	GIVPKVLKQEVNMAKYTLTKAGKDDKIFKEGFTISKTKLRYRIGSKETADKFNKGGVQVIPIESKDKATR
Ga0181576_101043831	3300017985	Salt Marsh	MAKFTCSIAGKDNKLFKEGFTTSNTKPRYRIGSKETADKFNKGGAQIIPIKKKQLRNDVF
Ga0181576_102310742	3300017985	Salt Marsh	MAKYTLIKAGKDDKIFKEGFTISKTKPRYRIGSKETADKFNKGGVSIIPLSGNKKL
Ga0181576_104565513	3300017985	Salt Marsh	MAKFTWSIAGKDDKIFKEGFIISNTKPRYRIGSKETADKFNKGGVSIIPLSGNKKL
Ga0181576_106943041	3300017985	Salt Marsh	MAKYTWSIAGKDDKIFKEGFTLSNTKPRYRIGSKETADKFNKGGAQVIPIESIDKVKERIFV
Ga0181576_107816592	3300017985	Salt Marsh	GIVPKVLKQEVNMAKYTLTIAGKDDKIFKEGFTVSNTKPRYRIGSKETADKFNSGGVSVIPLSRKGKNHK
Ga0181569_101403054	3300017986	Salt Marsh	MAKYTLTKAGKQDKIFKEGFIISNTKQRYRIGSKETADKFNKGGVQIIAISSRKK
Ga0181569_102440611	3300017986	Salt Marsh	MAKYTWSIAGKDDKIFKEGFTISNTKPRNRIGSKETADKFNKGGAQIVPVKSKAKGLKLATQEE
Ga0181569_105609141	3300017986	Salt Marsh	MVPKVLKQEVKMAKYTLTKAGKDDEIFKEGFTTSNIKPRYRIGSKETADKFNKGGAQVIPVESKNKG
Ga0181569_108117312	3300017986	Salt Marsh	MAKYTWSIAGKDDKIFKEGFTISNTKPRYRIGSKETADKFNKGGAQVIPIE
Ga0181606_103707923	3300018048	Salt Marsh	MAKYTWSIAGKDDKIYKEGFTISNTKPRYRIGSKETADKFNKGGAQIVPVKSKAKGLKLATQKECDR
Ga0181572_104869542	3300018049	Salt Marsh	MAKYTLTISGKDDKIFKECFTVSNTKPRYRIGSKETADKFNSGGVSVIPLSRKGKNHK
Ga0181561_104105931	3300018410	Salt Marsh	MAKYTLTKAGKDDEIFKEGFTLSNTKPRYRIGSKETADKFNKGGCQIIPLSR
Ga0181558_104468723	3300018417	Salt Marsh	MAKYTWSIAGKDDKIFKEGFTISNTKPRYRIGSKETADKFNKGGAQVIPIEPKNKI
Ga0181567_100027481	3300018418	Salt Marsh	MAKYTLIVADKDDKIYKEGFTITNTKPRYRIGSKETADKFNKGGVQI
Ga0181567_100532785	3300018418	Salt Marsh	MAKYTLTIAGKDDKIYKEGFTISNTKPRHRIGSKETADKFNKGGAQVIPIESKK
Ga0181567_102624964	3300018418	Salt Marsh	LGIVPKVLKQEVIMAKYTLTKAGKQDKIFKEGFIISNTKQRYRIGSKETADKFNKGGVQIITLSSRKR
Ga0181567_105516441	3300018418	Salt Marsh	VHLGIVPKVLKQEVIMAKYTLIKAGKDDKIFKEGFIISNTKPRYRIGSKETADKFNKGGVSIIPLLGKIKP
Ga0181567_105533522	3300018418	Salt Marsh	MAKYTLTIAGKDDKIYKEGFTVSNNNSSKPKLKLGTQEDADKFNKGGVSIIPLSRKKKP
Ga0181567_107647261	3300018418	Salt Marsh	KQEVKMAKYTLTKAGKDDEIFKEGFTISNIKPRYRIGSKETADKFNKGGAQVIPVESKK
Ga0181592_104773914	3300018421	Salt Marsh	MAKYTWSIVGKDDKIFKEGFTISNTKPRYRIGSKETADKFNKGGAQVIPIEPKNKI
Ga0181592_106475092	3300018421	Salt Marsh	MAKYTLTKAGKDDKIFKEGFTISKKDNLKPRFKLGTQEGADKFNKGGVQVIPIRSKAKGLKFATQEEC
Ga0181592_106507632	3300018421	Salt Marsh	LGIVPKVLKQEVNMAKYTLTKAGKDDKIFKEGFTISNTKPRYRIGSKETADKFNKGGAQVIPVESKNKG
Ga0181591_100800044	3300018424	Salt Marsh	MAKYTLTVADKDDKIYKEGFTITNTKPRYRIGSKETADKFNKGGVQIITLNHKK
Ga0181591_102980463	3300018424	Salt Marsh	VLKQEVIMAKYTWSIAGKDDKIFKEGFTLSNTKPRYRIGSKETADKFNKGGVSIIPLSGNKKL
Ga0181591_108926011	3300018424	Salt Marsh	MTKYTLTKAGKGDKIFKEGFTISNTKPRYRIGSKETADKFNKGGAQVIPIESKDKVKKNVFVLGTQEE
Ga0181566_106614352	3300018426	Salt Marsh	EVKMAKYTLTKAGKDDEIFKEGFTISNIKPRYRIGSKETADKFNKGGAQVIPVESKK
Ga0181566_108054612	3300018426	Salt Marsh	MAKYTLIKAGKDDKIFKEGFTISNTKPRNRIGSKETADKFNKGGVSIIPLSGNKKL
Ga0181568_100551515	3300018428	Salt Marsh	MAKYTWSIAGKDDKIFKEGFTISNTKPRNRIGSKETADKFNKGGAQIVPVKSKAKGLKLA
Ga0181564_105149991	3300018876	Salt Marsh	MAKYTLTIAGKDDKIYKEGFTISNTKPRYRIGSKETADKFNKGGAQVIPI
Ga0182066_10580172	3300019262	Salt Marsh	MAKYTWSIAGKDDKIFKEGFTLSNTKPRYRIGSKETADKFNKGGAQVIPIESID
Ga0182066_11532182	3300019262	Salt Marsh	MAKYTLTKAGKDDEIFKEGFTISNIKPRYRIGSKETADKFNKGGVSIIPLSRKKEL
Ga0182066_11799032	3300019262	Salt Marsh	MAKYTLTKAGKDDKIFKEGFTISNTKPRYRIGSKETADKFNKGGVSIIPLSGNKKL
Ga0182066_11912542	3300019262	Salt Marsh	GIVPKVLKQEVNMAKYTLTVADKDDKIYKEGFTKSNTKPRYRIGSKETADKFNKGGVQIIAISSRKK
Ga0182073_15842362	3300019274	Salt Marsh	VRLGIVPKVLKQEVIMAKYTWSIAGKDDKIFKEDFTISNTKPRYRIGSKETADKFNKGGAQVIPIEPKNKI
Ga0182067_16257122	3300019276	Salt Marsh	GIVPKVLKQEVIMTKYTLTIAGNDDKIYKEGFTVSNTKPRYRIGSKETADKFNKGGVSIIPLSRKKEL
Ga0181570_100151442	3300020207	Salt Marsh	MAKYTWSIAGKDDKIFKEGFTISNTKPRYRIGSKETADKFNKGGVSIIPLSGNKKL
Ga0181570_101518503	3300020207	Salt Marsh	MAKYTLTIAGKDDKIYKEGSTISNTKPRYRIGSKETADKFNKGGAQVIPIESKDKVKR
Ga0181570_103825521	3300020207	Salt Marsh	MAKYTWSIAGKDDKIYKEGFTISHTKPRYRIGSKETADKFNKGGVQVIPIESKDKVKKNVFVLGTQE
Ga0255781_102086811	3300022934	Salt Marsh	LGIVPKVLKQEVIMAKFTWSIAGKDDKIFKEGFTISNTKPRYRIGSKETADKFNKGGVSIIPLSGNKKL
Ga0255770_100115624	3300022937	Salt Marsh	MAKYTLTKAGKEDKIFKEGFTLSNTKPRYRIGTKETADKFNKGGVQIITISSRKKEC
Ga0255770_103494751	3300022937	Salt Marsh	MTKYTLIIAGKDDKIYKEGFTVSNTKPRYRMGSKETADKFNKGGVSIIPLSRKKEL
Ga0255770_104612851	3300022937	Salt Marsh	MAKYTWSIAGKDDKIFKEGFTLPNTKPRYRIGSKETADKFNKGGAQVIPIESIDKVKERIFV
Ga0255754_101480481	3300022939	Salt Marsh	QEVNMAKYTLTIAGKDDKIYKEGFTISNTKPRYRIGSKETADKFNKGGAQVIPIESKK
Ga0255764_103741361	3300023081	Salt Marsh	MAKYTLTKAGKDDKIFKEGFTISKKDNLKPRFKLGTQEGADKFNKGGVQVIPI
Ga0255778_104225621	3300023084	Salt Marsh	RLGIVPKVLKQEVIMAKYTLIKAGKDDKIFKEGFTISKTKPRYRIGSKETADKFNKGGVSIIPLSGNKKL
Ga0255782_100623264	3300023105	Salt Marsh	MAKYTLTKAGKQDKIFKEGFIISNTKQRYRIGSKETADKFNKGGVQIITLSSRKR
Ga0255782_103662231	3300023105	Salt Marsh	MAKYTWSIAGKDDKIFKEGFTLPNTKPRYRIGSKETADKFNKGGAQVIPI
Ga0255784_102989101	3300023108	Salt Marsh	VPKVLKQEVIMAKYTWSIAGKDDKIFKEGFTISNTKPRYRIGSKETADKFNKGGAQVIPIEPKNKI
Ga0255743_101137763	3300023110	Salt Marsh	MAKYTWSIAGKDDKIFKEGFIISNTKPRYRIGSKETADKFNKGGVSIIPLLGKIKP
Ga0255743_102153541	3300023110	Salt Marsh	LVRLGIVPKVLKQEVIMAKYTWSIAGKDDKIFTEGFTISNTKPRNRIGSKETADKFNKGGVSIIPLSGNKKL
Ga0255743_102458561	3300023110	Salt Marsh	MAKYTLTKAGKQDKIFKEGFIISNTKQRYRIGSKETADKFNKGGV
Ga0255760_102843783	3300023115	Salt Marsh	LKQEVIMAKYTLIKAGKDDKIFKEGFIISNTKPRYRIGSKETADKFNKGGVSIIPLLGKIKP
Ga0255751_102507513	3300023116	Salt Marsh	GKDDKIYKEGFTVSNTKPRYRIGSKETADKFNKGGVSIIPLSRKKEL
Ga0255751_103208113	3300023116	Salt Marsh	EVIMAKYTWSIAGKDDKIFKEGFTISNTKPRYRIGSKETADKFNKGGVSIIPLLGKIKP
Ga0255751_103788901	3300023116	Salt Marsh	MAKYTLTKAGKDDKIFKVGFTISNTKPRCRIGSKETADKYNQGGCQIIPLSRKRKFS
Ga0255762_100065794	3300023119	Salt Marsh	MVKYTLTKAGKKDKIFKEGYTISNTKPRYRIGSKETADKFNKGGVQIIAISSRKK
Ga0255762_105701632	3300023119	Salt Marsh	MAKYTWSIAGKDDKIYKEGFTLSNTKPRNRIGSKETADKFNKGGVSIIPLSGNKKL
Ga0255761_100445254	3300023170	Salt Marsh	MAKYTWSIAGIGDKLYKEGFTISNTKPRNRIGSKETADKFNKGGVQIIAISSRKK
Ga0255766_103108362	3300023172	Salt Marsh	LVRLGIVPKVLKQEVNMAKYTLTKAGKDDKIFKEGFTISNTKPRYRIGSKETADKFNKGGAQVIPVESKNKG
Ga0255777_103369942	3300023175	Salt Marsh	MAKYTWSIAGKDDKIYKEGFIISNTKPRYRIGSKETADKFNKGGVSIIPLLGKIKP
Ga0255772_103476251	3300023176	Salt Marsh	TWSIAGKDDKIFKEGFIISNTKPRYRIGSKETADKFNKGGVSIIPLLGKIKP
Ga0255772_104054391	3300023176	Salt Marsh	MAKYTWSIAGKDDKIFKEGFTISNTKPRYRIGSKETADKFNKGGAQVIPIEPK
Ga0255759_107846292	3300023178	Salt Marsh	MAKYTWSIAGKDDKIFKEGFTISNTKPRYRIGSKETADKFNKGGVSIIPLSG
Ga0255768_100817141	3300023180	Salt Marsh	MAKYTWSIAGKDDKIFKEGFTISNTKPRYRIGSKETADKFNKGGAQVIPIESKDK
Ga0255768_103409983	3300023180	Salt Marsh	PKVLKQEVIMAKYTWSIAGKDDKIYKEGFIISNTKPRYRIGSKETADKFNKGGVSIIPLLGKIKP
Ga0255768_104947671	3300023180	Salt Marsh	MAKYTWSIAGKDDKIFKEGFTISNTKPRNRIGSKETADKFNKGGAQIVPVKSKA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079409

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences