Metagenome Family F079448

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079448
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	71 residues
Representative Sequence	MSISNAIIGLILLALAVAGAWRWYDNHVRAQSKNQMMETAAGDVRETAECHLEAFKLRPGLTETDLEVQAAFMD
Number of Associated Samples	62
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	82.61 %
% of genes near scaffold ends (potentially truncated)	90.43 %
% of genes from short scaffolds (< 2000 bps)	95.65 %
Associated GOLD sequencing projects	55
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (71.304 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.913 % of family members)
Environment Ontology (ENVO)	Unclassified (66.957 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.087 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 62.75% β-sheet: 0.00% Coil/Unstructured: 37.25%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF00239	Resolvase	1.74
PF01527	HTH_Tnp_1	1.74
PF04828	GFA	0.87
PF09834	DUF2061	0.87
PF13358	DDE_3	0.87
PF00005	ABC_tran	0.87
PF00753	Lactamase_B	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.74
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	1.74
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.30 %
All Organisms	root	All Organisms	28.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.30 %
cellular organisms	root	All Organisms → cellular organisms	28.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.30 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	24.35 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.30 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.74 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.87 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.30 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.70 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	6.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.87 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.30 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.09 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.61 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.87 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.30 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.09 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.61 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.87 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.30 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.09 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.74 %
unclassified Burkholderia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → unclassified Burkholderia	0.87 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.87 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.30 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.09 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.74 %
Burkholderia sp. Ch1-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → unclassified Burkholderia → Burkholderia sp. Ch1-1	0.87 %
Bradyrhizobium sp. ERR14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ERR14	0.87 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004268\|Ga0066398_10109994	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300005332\|Ga0066388_105438972	Not Available	645	Open in IMG/M
3300005332\|Ga0066388_105556642	Not Available	638	Open in IMG/M
3300005332\|Ga0066388_106223340	Not Available	602	Open in IMG/M
3300005764\|Ga0066903_101160301	All Organisms → cellular organisms → Bacteria	1430	Open in IMG/M
3300005764\|Ga0066903_103007281	Not Available	913	Open in IMG/M
3300005764\|Ga0066903_103172240	Not Available	889	Open in IMG/M
3300005764\|Ga0066903_104973109	Not Available	705	Open in IMG/M
3300005764\|Ga0066903_105865274	Not Available	644	Open in IMG/M
3300005764\|Ga0066903_106533873	Not Available	607	Open in IMG/M
3300005764\|Ga0066903_108281066	Not Available	532	Open in IMG/M
3300010046\|Ga0126384_11088173	Not Available	732	Open in IMG/M
3300010046\|Ga0126384_11182947	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300010047\|Ga0126382_11886414	Not Available	565	Open in IMG/M
3300010048\|Ga0126373_12094157	Not Available	628	Open in IMG/M
3300010358\|Ga0126370_11597121	Not Available	624	Open in IMG/M
3300010359\|Ga0126376_12498576	Not Available	564	Open in IMG/M
3300010360\|Ga0126372_10271129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1471	Open in IMG/M
3300010360\|Ga0126372_11945915	Not Available	634	Open in IMG/M
3300010361\|Ga0126378_10193721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	2105	Open in IMG/M
3300010361\|Ga0126378_12130979	Not Available	639	Open in IMG/M
3300010361\|Ga0126378_13465518	Not Available	500	Open in IMG/M
3300010362\|Ga0126377_11019232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	894	Open in IMG/M
3300010366\|Ga0126379_11834527	Not Available	710	Open in IMG/M
3300010366\|Ga0126379_12687217	Not Available	595	Open in IMG/M
3300010366\|Ga0126379_12715691	Not Available	592	Open in IMG/M
3300010376\|Ga0126381_100175549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → unclassified Burkholderia → Burkholderia sp. Ch1-1	2841	Open in IMG/M
3300010376\|Ga0126381_101763098	Not Available	894	Open in IMG/M
3300010398\|Ga0126383_11715204	Not Available	717	Open in IMG/M
3300010398\|Ga0126383_11921065	Not Available	680	Open in IMG/M
3300010398\|Ga0126383_13196432	Not Available	535	Open in IMG/M
3300010398\|Ga0126383_13349258	All Organisms → cellular organisms → Bacteria → Proteobacteria	523	Open in IMG/M
3300010398\|Ga0126383_13570531	Not Available	508	Open in IMG/M
3300012971\|Ga0126369_10789878	Not Available	1031	Open in IMG/M
3300012971\|Ga0126369_12023841	Not Available	664	Open in IMG/M
3300012971\|Ga0126369_12595982	Not Available	591	Open in IMG/M
3300016270\|Ga0182036_10121588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1813	Open in IMG/M
3300016270\|Ga0182036_10137773	Not Available	1720	Open in IMG/M
3300016270\|Ga0182036_11379451	Not Available	590	Open in IMG/M
3300016319\|Ga0182033_10626477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	936	Open in IMG/M
3300016319\|Ga0182033_11839881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ERR14	550	Open in IMG/M
3300016319\|Ga0182033_11960149	Not Available	533	Open in IMG/M
3300016341\|Ga0182035_11114857	Not Available	702	Open in IMG/M
3300016341\|Ga0182035_11408671	Not Available	626	Open in IMG/M
3300016341\|Ga0182035_11696401	Not Available	571	Open in IMG/M
3300016341\|Ga0182035_12114223	Not Available	511	Open in IMG/M
3300016357\|Ga0182032_10852681	Not Available	772	Open in IMG/M
3300016357\|Ga0182032_11755638	Not Available	542	Open in IMG/M
3300016371\|Ga0182034_10591368	Not Available	935	Open in IMG/M
3300016371\|Ga0182034_10690525	Not Available	867	Open in IMG/M
3300016371\|Ga0182034_10970842	Not Available	733	Open in IMG/M
3300016387\|Ga0182040_10755417	Not Available	798	Open in IMG/M
3300016387\|Ga0182040_11889224	Not Available	512	Open in IMG/M
3300016422\|Ga0182039_10983998	Not Available	756	Open in IMG/M
3300016422\|Ga0182039_11014956	Not Available	744	Open in IMG/M
3300016445\|Ga0182038_10069072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2445	Open in IMG/M
3300016445\|Ga0182038_10329006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1259	Open in IMG/M
3300021560\|Ga0126371_13550963	Not Available	526	Open in IMG/M
3300027548\|Ga0209523_1027861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1124	Open in IMG/M
3300031544\|Ga0318534_10857621	Not Available	509	Open in IMG/M
3300031561\|Ga0318528_10282138	Not Available	891	Open in IMG/M
3300031572\|Ga0318515_10610378	Not Available	579	Open in IMG/M
3300031573\|Ga0310915_10114837	Not Available	1833	Open in IMG/M
3300031573\|Ga0310915_10514174	Not Available	850	Open in IMG/M
3300031573\|Ga0310915_10906646	Not Available	617	Open in IMG/M
3300031668\|Ga0318542_10270036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	867	Open in IMG/M
3300031679\|Ga0318561_10247035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	973	Open in IMG/M
3300031681\|Ga0318572_10540922	Not Available	694	Open in IMG/M
3300031719\|Ga0306917_10135490	Not Available	1811	Open in IMG/M
3300031719\|Ga0306917_11173731	Not Available	596	Open in IMG/M
3300031723\|Ga0318493_10259041	Not Available	931	Open in IMG/M
3300031736\|Ga0318501_10221732	Not Available	994	Open in IMG/M
3300031736\|Ga0318501_10266287	Not Available	909	Open in IMG/M
3300031736\|Ga0318501_10294054	Not Available	866	Open in IMG/M
3300031744\|Ga0306918_10409987	Not Available	1056	Open in IMG/M
3300031744\|Ga0306918_11539441	Not Available	508	Open in IMG/M
3300031751\|Ga0318494_10414179	Not Available	782	Open in IMG/M
3300031763\|Ga0318537_10275032	Not Available	624	Open in IMG/M
3300031770\|Ga0318521_10293577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	955	Open in IMG/M
3300031780\|Ga0318508_1050904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1094	Open in IMG/M
3300031782\|Ga0318552_10166284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1111	Open in IMG/M
3300031795\|Ga0318557_10135626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1107	Open in IMG/M
3300031797\|Ga0318550_10342003	Not Available	725	Open in IMG/M
3300031797\|Ga0318550_10486333	Not Available	596	Open in IMG/M
3300031821\|Ga0318567_10166530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1223	Open in IMG/M
3300031846\|Ga0318512_10173373	Not Available	1048	Open in IMG/M
3300031879\|Ga0306919_10223029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1409	Open in IMG/M
3300031879\|Ga0306919_11326128	Not Available	544	Open in IMG/M
3300031890\|Ga0306925_10151414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2496	Open in IMG/M
3300031890\|Ga0306925_10797104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	980	Open in IMG/M
3300031890\|Ga0306925_10899605	Not Available	910	Open in IMG/M
3300031890\|Ga0306925_11292813	Not Available	725	Open in IMG/M
3300031910\|Ga0306923_10928902	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300031910\|Ga0306923_11677924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	657	Open in IMG/M
3300031912\|Ga0306921_10678877	Not Available	1185	Open in IMG/M
3300031941\|Ga0310912_10243144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1383	Open in IMG/M
3300031942\|Ga0310916_10598204	Not Available	937	Open in IMG/M
3300031946\|Ga0310910_10109588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2062	Open in IMG/M
3300031946\|Ga0310910_10396999	Not Available	1092	Open in IMG/M
3300031946\|Ga0310910_11243955	Not Available	576	Open in IMG/M
3300031946\|Ga0310910_11385256	Not Available	541	Open in IMG/M
3300031946\|Ga0310910_11544560	Not Available	508	Open in IMG/M
3300031954\|Ga0306926_11087193	Not Available	946	Open in IMG/M
3300031981\|Ga0318531_10157781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1017	Open in IMG/M
3300031981\|Ga0318531_10239128	Not Available	819	Open in IMG/M
3300032001\|Ga0306922_10977131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	875	Open in IMG/M
3300032001\|Ga0306922_12362696	Not Available	508	Open in IMG/M
3300032035\|Ga0310911_10070493	Not Available	1865	Open in IMG/M
3300032041\|Ga0318549_10526456	Not Available	531	Open in IMG/M
3300032044\|Ga0318558_10116010	All Organisms → cellular organisms → Bacteria → Proteobacteria	1266	Open in IMG/M
3300032066\|Ga0318514_10514018	Not Available	637	Open in IMG/M
3300032076\|Ga0306924_10418762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1532	Open in IMG/M
3300032090\|Ga0318518_10302668	Not Available	821	Open in IMG/M
3300033289\|Ga0310914_10884383	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300033289\|Ga0310914_11460669	Not Available	587	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.57%
Loam	Environmental → Terrestrial → Soil → Loam	10.43%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	66.96%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.43%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.04%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	22.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066398_101099941	3300004268	Tropical Forest Soil	MRISNTVIALILLALAVAGAWRWYEARSKNQKMEAAAQDVRETAECHLEAFKL
Ga0066388_1054389722	3300005332	Tropical Forest Soil	MSISNAIIGLILLALAVAGAWRWYDNHVRAQSKNQMMETAAGDVRETAECHLEAFKLRPGLTETDLEVQA
Ga0066388_1055566422	3300005332	Tropical Forest Soil	MRISNTIIALILLALAVAGAWGWYEAQSKNQKMETAAQDVRETAECHLEAFKLRPGLTET
Ga0066388_1062233403	3300005332	Tropical Forest Soil	MWIGNTIIGLILLALAVAGAWRWYDSHVRAQSKNQMMETAARDVRETAECHLEAFKLRPGLVPRLRLLPIAVDR*
Ga0066903_1011603011	3300005764	Tropical Forest Soil	MLTSFKNTIIGLILLALAVAGAWSWYDSHLKSQSKDQTMETAERDVRDTAECHL
Ga0066903_1030072812	3300005764	Tropical Forest Soil	MLTTSFKNTIIGLILLAIAVAGAWSWYDSYLKSQSKDQAMETAGRDVRDTAECHLEAFKLRPGLTETDVEIQA
Ga0066903_1031722401	3300005764	Tropical Forest Soil	MWIGNTIIGLILLALAVAGAWRWYEAQNKNQKMETAAQDIRETAECHLEAFKLRPGLTDTDLEVQAAFMDICMEARGYVLLPSCNPNEPTQ*
Ga0066903_1049731092	3300005764	Tropical Forest Soil	MSISNAIIGLILFALAVAGAWRWYDNRVRAQSKNQMTETAARDVRETAECHLEAFKLRP
Ga0066903_1058652742	3300005764	Tropical Forest Soil	MAKWIGNTVIALIFLALAVAGAWRWYDSHVKSQSKDQIVETAGRDVRETAECHLEAFKLRPGLEETDVEIQAAFMDICMAARGYVFLPSC
Ga0066903_1065338731	3300005764	Tropical Forest Soil	MWIGNTIIGLILLALAVAGAWRWYDAQSKNQKMETAAQDVRETAECHLEAFKLRPGLTETDLEVQ
Ga0066903_1082810661	3300005764	Tropical Forest Soil	MLTSFKNTMIGLILLALAVAGAWSWYDSHLKSQSKDQTMETAERDVRDTAECHLEAFKL
Ga0126384_110881732	3300010046	Tropical Forest Soil	MIIGLILLALAVASAWSWYDSHLKSQSKDQTMETAERDVRDTAECHLEAFKLRPGLTETDVEIQAAFMDICMEAR
Ga0126384_111829472	3300010046	Tropical Forest Soil	MWIGNTIIGLILLALAVAGAWRWYEAQNKNQKMKTAAQDVRETAECHLEAFKLR
Ga0126382_118864143	3300010047	Tropical Forest Soil	MRISNTIVALILFALAIAGAWRWYEAQSKNQKMETAAQDVRETAECHLE
Ga0126373_120941571	3300010048	Tropical Forest Soil	MRISNTIIALILLALAVAGAWGWYEAQSKNQKMETAAQDVRETAECHLEAFKLRPG
Ga0126370_115971212	3300010358	Tropical Forest Soil	MRTSNTIIALILLALAVAGAWRWYEAQSKNQKMETAAQDVRETAECHLEAFKLRPGLTET
Ga0126376_124985761	3300010359	Tropical Forest Soil	MSISNAIIGLILLALAVAGAWRWYDNHVRAQSKNQMMETAAGDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYIFLP
Ga0126372_102711291	3300010360	Tropical Forest Soil	MWISNTIIGLILFALAIAGAGRWYEAQSKNQMMETAARDVRETAECHLEAFKLRPGLTESDLEVQAAF
Ga0126372_119459152	3300010360	Tropical Forest Soil	MRISNTIIALILLALAVAGAWGWYEAQSKNQKMETAAQDVRETAECHLEAFKLR
Ga0126378_101937213	3300010361	Tropical Forest Soil	MRTSNTIIALILLALAVAGAWRWYEAQSKNQKMETAAQDVRETAECHLEAFKLRPGL
Ga0126378_121309792	3300010361	Tropical Forest Soil	MWISNAIIGLILLALAVAGAWRWYDSHVRAQSKDQMMETAARDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYIFLPGC
Ga0126378_134655181	3300010361	Tropical Forest Soil	MRISNTIIALILLALAVAGAWGWYEAQSKNQKMETAAQDVRETAECHLEAFKLRP
Ga0126377_110192321	3300010362	Tropical Forest Soil	ASGGKALGWEMWIGSTIIGLILLALAVAGAWSWYDSHLKSQSKDQMVETAERDVRETAECHLEAFKSRPGSTETDLEVQAAFMDICMEARGYMFSSILHRGNPQ*
Ga0126379_118345272	3300010366	Tropical Forest Soil	MGNVIGNTIIALILSALAVAGAWRWYDSHVRAQSKDQVMETAARDVRETAECHLEAFKLRPGLTEMDLEVQAAFMDICMVAR*
Ga0126379_126872171	3300010366	Tropical Forest Soil	MLTTSFKNTIIGLILLALAAAGAWHWYDSQMKAQSKDQMMETAERDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEA
Ga0126379_127156912	3300010366	Tropical Forest Soil	MLTTIGLVLLALAIAGAWSWYDSRLKSQSKDQTMATAERDVRETAECHLEAFKLRPGLTETDVEIQAAFMDICMEARGYVFLRGCT
Ga0126381_1001755495	3300010376	Tropical Forest Soil	MWIRNTIMGLILLALAVAGAWRWYDSYVQVQSKNELMETATRDVGETAECHLETFKLRPGLTETDFELQAAFMDFCMEARGYVFLP
Ga0126381_1017630981	3300010376	Tropical Forest Soil	MRTSNTIIALILLALAVAGAWRWYEAQSKNQKMETAAQDVRETAECHLEA
Ga0126383_117152042	3300010398	Tropical Forest Soil	MSISNAIIGLILLALAVAGAWRWYDSHVRAQSKDQMMETAARDVRETAECHLEAFKLRPG
Ga0126383_119210652	3300010398	Tropical Forest Soil	MWIGNTIIALILLALAVAGAWRWYDSHVRAQSKDQVMETAARDVRETAECHLEAFKLRPGLTEMDLEVQA
Ga0126383_131964321	3300010398	Tropical Forest Soil	MWIGNTIIALILLALAVAGAWRWYDSHMRAQTKNQVAETASQDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMAAR
Ga0126383_133492581	3300010398	Tropical Forest Soil	MWISNTIIGLVLLALAVAGAWRWYDSHVRAQSKNQMTETAARDVRETAECHL
Ga0126383_135705311	3300010398	Tropical Forest Soil	MRTSNTIIALILLALAVAGAWRWYEAQSKNQKMETAAQDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGY
Ga0126369_107898783	3300012971	Tropical Forest Soil	MRISNTIIALILLALAVAGAWGWYEAQSKNQKMETAAQDVRETAECHL
Ga0126369_120238411	3300012971	Tropical Forest Soil	MSISNAIIGLILLALAVAGAWRWYDNHVRAQSKNQMMETAAGDVRETAECHLEAFKLRPGLTETDLEVQAAFM
Ga0126369_125959822	3300012971	Tropical Forest Soil	MLTSFKNTIIGLILLALAVVGAWSWYDSHLKSQSKDQTMETAERDVPDTAECH
Ga0182036_101215885	3300016270	Soil	MSISNAIIGLILFALAVAGAWRWYDNRVRAQSKNQMTETAAGDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICM
Ga0182036_101377731	3300016270	Soil	MWIGNTIIGLILLALAVAGAWRWYEAQSKNQKMEAAAQVVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYVF
Ga0182036_113794512	3300016270	Soil	MSISNAIIGLILLALAVAGAWRWYDNHVRAQSKNQMMETAAGDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICM
Ga0182033_106264771	3300016319	Soil	MWISNTIIALILLALALAGAWRWYDSHLKADSKNQMLETASRDVRETAECHLEAFKLRPG
Ga0182033_118398811	3300016319	Soil	MRTSNTIIALILLALAVAGVWRWYEAQSKNQKMETAAQDVRETAECYLEAFKLRPGLTETDLEVQAAFMDICMEAR
Ga0182033_119601492	3300016319	Soil	MWTGNTIIALILLALAAAGAWRWYEAQSKNQKMETTAQDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEA
Ga0182035_111148572	3300016341	Soil	LGWEIRISNTIIALILLALAVAGAWGWYEAQSKNQEMETAAQDVRETAECHLEAFKLRPGLTE
Ga0182035_114086711	3300016341	Soil	LILLALAIAGAWRWYDSHLKSQSKEMETAAREVRETAECQLEAFKLRPGLTETDLEVQAAFMDICMAARGYVFLPDCTETTQAARYLCKRSY
Ga0182035_116964011	3300016341	Soil	LILLALAIAGAWRWYDSHVKSQSKEMETAAREVRETAECQLEAFKLRP
Ga0182035_121142231	3300016341	Soil	VWIGNTIIASILLALAIAGAWRWYDSHVKSQSKEMETAARDVRETAECYLEAFK
Ga0182032_108526811	3300016357	Soil	LGWGMWIGNTIIGLILLALAVAGAWRWYEAQSKNQKMEAAAQVVRETAECHLEAFKLRPGLTETDLEVQAAFMDICME
Ga0182032_117556381	3300016357	Soil	LILLAVAVAGAWRWYEAQSKNQKMETAAQVVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEA
Ga0182034_105913683	3300016371	Soil	MSISNAIIGLILLALAVAGAWRWYDNHVRAQSKNQMTETAARDVRETAECHLEAFKLRPG
Ga0182034_106905251	3300016371	Soil	LGWGMWIGNTIIGLILLALAVAGAWRWYEAQSKNQKMEAAAQVVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARRY
Ga0182034_109708423	3300016371	Soil	MSISNAIIGLILFALAVAGAWRWYDNRVRAQSKNQMTETAAGDVRETAECHLEAFKLRPGLTETDLEVQAAF
Ga0182040_107554172	3300016387	Soil	MSISNAIIGLILLALAVAGAWRWYDNRVLAQSESEVTERGAGDVRETAECHLEAFKLRPGLTETDLEVHAAFMDICME
Ga0182040_118892241	3300016387	Soil	LILLAVAVAGAWRWYEAQSKNQKMETTAQDVREAAECHLEAFKLRPGL
Ga0182039_109839981	3300016422	Soil	MRTSNTIIALILLALALAGAWRWYEAQSKNQKMETAAQDVRETAECHLEAFKLR
Ga0182039_110149562	3300016422	Soil	LIFLALAIAGAWRWYDSHVKSQSKEMETAAREVRETAECQLEAFKLRPGLTETDLEVQAAFMDICMAARGYVFLPDCTETTQAARYLCKRSY
Ga0182038_100690721	3300016445	Soil	MRTSNTIIALILLALAVAGVWRWYEAQSKNQKMETAAQDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICME
Ga0182038_103290061	3300016445	Soil	MSISNAIIGLILLALAVAGAWRWYDNHVRAQSKNQMMETAAGDVRETAECHLEAFKLRPGLTETDLEVQAAFMD
Ga0126371_135509631	3300021560	Tropical Forest Soil	MRTSNTIIALILLALALAGAWRWYEAQSKNQKMETAAQDVRETA
Ga0209523_10278613	3300027548	Forest Soil	MWIGNTIIALILLALAIASAWRWYDSHVKSQNKDQVMETAVRDVRETAECHLEAFKL
Ga0318534_108576211	3300031544	Soil	MSISNAIIGLILLALAVAGAWRWYDNHVRAQSKNQMMETAAGDVRETAECHLEAFKLRP
Ga0318528_102821383	3300031561	Soil	MSISNAIIGLILLALAVAGAWRWYDNHVRAQSKNQMMETAAGDVRETAECHLE
Ga0318515_106103782	3300031572	Soil	MSISNAIIGLILFALAVAGAWRWYDNRVRAQSKNQMTETAAGDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYI
Ga0310915_101148374	3300031573	Soil	MWIGNTIIGLILLALAVAGAWRWYEAQSKNQKMEAAAQVVRETAECHLEAFKLRPGLTETDLEVQAA
Ga0310915_105141741	3300031573	Soil	NSSEQGPGGGEKVWIGNTIIALILLALAIAGAWRWYDSHVKSQSKEMETAAREVRETAECQLEAFKLRPGLTETDLEVQAAFMDICMAARGYVFLPDCTETTQAARYLCKRSY
Ga0310915_109066461	3300031573	Soil	MWIGSTIIGLILLALAVAGAWSWYESHLKSQSKDQMVETAERDVRETAECHLEAFMSRPGSTETDLEVQAAFMDICMEARGYVFL
Ga0318542_102700361	3300031668	Soil	MSISNAIIGLILFALAVAGAWRWYDNRVRAQSKNQMTETAARDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICME
Ga0318561_102470353	3300031679	Soil	MSISNAIIGLILFALAVAGAWRWYDNRVRAQSKNQMTETAARDVRETAECHLEAFK
Ga0318572_105409221	3300031681	Soil	VWIGNTIIASILLALAIAGAWRWYDSHVKSQSKEMETAAREVRETAECQLEAFKLRPGLTETDLEVQAAFMDICMAARGYVFLPDCTETTQAARYLCKRSY
Ga0306917_101354901	3300031719	Soil	MRTSNTIIALILLALALAGAWRWYEAQSKNQKMETAAQDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICM
Ga0306917_111737311	3300031719	Soil	MSISNAIIGLILFALAVAGAWRWYDNRVRAQSKNQMTETAAGDVRETAECHLEAFKLRPGLTETDLEVQAAFM
Ga0318493_102590411	3300031723	Soil	MSISNAIIGLILLALAVAGAWRWYDNHVRAQSKNQMMETAAGDVRETAECHLEAFKLRPGLTETDLEVHAAFMD
Ga0318501_102217323	3300031736	Soil	MSISNAIIGLILLALAVAGAWRWYDNHVRAQSKNQMMETAAGDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEA
Ga0318501_102662871	3300031736	Soil	LILLALAIAGAWRWYDSHVKSQSKEMETAAREVRETAECQLEAFKLRPGLTETDLEVQAAFMDICMAARGYVFLPDCTETTQAARYLCKRSY
Ga0318501_102940541	3300031736	Soil	MRTSNTIIALILLALALAGAWRWYEAQSKNQKMETAAQDVRETAECHMEAFKLRPGLTETDLEV
Ga0306918_104099871	3300031744	Soil	MSISNAIIGLILLALAVAGAWRWYDNHVRAQSKNQMMETAAGDVRETAECHLEAFKLRPGLTETDLEV
Ga0306918_115394411	3300031744	Soil	ASGQALGWEMWIGNTIVGVILLALAVAGAWRWYESHLKAQSKNQLVETAARDVRETAECHLEAFTLRPGLTEPDFEVQAVFTDICMKARG
Ga0318494_104141791	3300031751	Soil	MSISNAIIGLILFALAVAGAWRWYDNRVRAQSKNQMTETAARDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARG
Ga0318537_102750322	3300031763	Soil	LGWGMWIGNTIIGLILLALAVAGAWRWYEAQSKNQKMEAAAQVVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYVFL
Ga0318521_102935771	3300031770	Soil	MSISNAIIGLILFALAVAGAWRWYDNRVRAQSKNQMTETAARDVRETAECHLEAFKLRPGLTETDLKVQAAFMDICME
Ga0318508_10509042	3300031780	Soil	MWISNTIIALILLALALAGAWRWYDSHLKADSKNQMLETASRDVRETAECHLEAFKLRPGLTETDL
Ga0318552_101662843	3300031782	Soil	MWIGNAIIGLILLALAVAGAWSWYDSHVKSQSKDQMVETAERDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMAAR
Ga0318557_101356261	3300031795	Soil	MSISNAIIGLILFALAVAGAWRWYDNRVRAQSKNQMTETAAGDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICME
Ga0318550_103420031	3300031797	Soil	LGWGMWIGNTIIGLILLALAVAGAWRWYEAQSKNQKMEAAAQVVRETAECHLEAFKLRPGLTETDLEVQAAFMDIC
Ga0318550_104863331	3300031797	Soil	IGNTIIALILLALAIAGAWRWYDSHVKSQSKEMETAAREVRETAECQLEAFKLRPGLTETDLEVQAAFMDICMAARGYVFLPDCTETTQAARYLCKRSY
Ga0318567_101665301	3300031821	Soil	MSISNAIIGLILLALAVAGAWRWYDNHVRAQSKNQMMETAAGDVRETAECHLEAFKLRPGLTETDLQVQAAFMDICME
Ga0318512_101733731	3300031846	Soil	MSISNAIIGLILLALAVAGAWRWYDNHVRAQSKNQMMETAAGDVRETAECHLEAFKLRPGLTETDLEVHAAFMDICMEARGYIFLPGCTA
Ga0306919_102230291	3300031879	Soil	MSISNAIIGLILFALAVAGAWRWYDNRVRAQSKNQMTETAAGDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEA
Ga0306919_113261281	3300031879	Soil	LILLAVAVAGAWRWYEAQSKNQKMETAAQVVRETAECHLEAFKLRPGLTETDLEVQAAFMDICM
Ga0306925_101514141	3300031890	Soil	LAISLILLAVAVAGAWRWYEAQSKNQKMETAAQVVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYVFLPSCNPN
Ga0306925_107971041	3300031890	Soil	MSISNAIIGLILFALAVAGAWRWYDNRVRAQSKNQMTETAARDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYI
Ga0306925_108996053	3300031890	Soil	MSISNAIIGLILLALAVAGAWRWYDNHVRAQSKNQMMETAAGDVRETAECHLEAFKLRPGLTETDLEVQAAF
Ga0306925_112928132	3300031890	Soil	LILLALAIAGAWRWYDSHVKSQSKEMETAAREVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMAARGYVFLPDCTETTQAARYLCKRSY
Ga0306923_109289021	3300031910	Soil	MLTSFKNTIIGLILLALAVAGAWSWYDSHLKSPSKDQTMETAERDVRDTAECHLEAFKLRPGLTETDVEIQAAF
Ga0306923_116779241	3300031910	Soil	VWIGNTIIASILLALAIAGAWRWYDSHVKSQSKEMETAARDVRETAECYLEAFKLRPG
Ga0306921_106788773	3300031912	Soil	MSISNAIIGLILLALAVAGAWRWYDNHVRAQSKNQMMETAAGDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMKA
Ga0310912_102431443	3300031941	Soil	MSISNAIIGLILFALAVAGAWRWYDNRVRAQSKNQMTETAARDVRETAECHLEAFKLRPGLTETDLEV
Ga0310916_105982043	3300031942	Soil	MSISNAIIGLILLALAVAGAWRWYDNHVRAQSKNQMMETAAGDVRETAECHLEAFKLRPGLTETD
Ga0310910_101095885	3300031946	Soil	MSISNAIIGLILFALAVAGAWRWYDNRVRAQSKNQMTETAAGDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYIFLP
Ga0310910_103969991	3300031946	Soil	MSISNAIIGLILLALAVAGAWRWYDNHVRAQSKNQMMETAAGDVRETAECHLEAFKLRPGLTETDLQVQ
Ga0310910_112439551	3300031946	Soil	LILLAVAVAGAWRWYEAQSKNQKMETAAQVVRETAECHLEA
Ga0310910_113852562	3300031946	Soil	MWIGSTIIGLILLALAVAGAWSWYESHLKSQSKDQMVETAERDVRETAECHLEAFMSRPGSTETDLEVQAAFMDIVW
Ga0310910_115445602	3300031946	Soil	MSISNAIIGLILLALAVAGAWRWYDNHVRAQSKNQMMETAAGDVRETAECHLEAFKLRPGLTETDLE
Ga0306926_110871933	3300031954	Soil	MSISNAIIFLILLALAVAGAWRWYDNHVRAQSKNQMMETAAGDVRETAECHLEAFKLRPGLTETDLEVQAAF
Ga0318531_101577813	3300031981	Soil	MSISNAIIGLILLALAVAGAWRWYDNHVRAQSKNQMMETAAGDVRETAECHLEAFKLRPG
Ga0318531_102391281	3300031981	Soil	MSISNAIIGLILFALAFAGAWRWYDNRVRAQSKNQMTETAARDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYI
Ga0306922_109771312	3300032001	Soil	VWIGNTIIASILLALAIAGAWRWYDSHVKSQSKEMETAARDVRETAECYLEAFKLRPGLTETDLE
Ga0306922_123626961	3300032001	Soil	MCAWISNTIIGLILLALAVAGAWRWYDSHVQAQSKNQMMETAAQEVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYVFV
Ga0310911_100704934	3300032035	Soil	MWIGNTIIGLILLALAVAGAWRWYEAQSKNQKMEAAAQVVRETAECHLEAFKLRP
Ga0318549_105264561	3300032041	Soil	LILLAVAVAGAWRWYEAQSKNQKMETAAQVVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEAR
Ga0318558_101160104	3300032044	Soil	VWIGNTIIASILLALAIAGAWRWYDSHVKSQSKEMETAARDVRETAECYLEAFKLRPGLTETDLEVQAAFMDICMAARGYVFLPDCTETTQAARYLCKRSY
Ga0318514_105140181	3300032066	Soil	MSISNAIIGLILLALAVAGAWRWYDNHVRAQSKNQMMETAAGDVRETAECHLEAFKLRPGLTETDLEVHAAFMDICMEARGYIFL
Ga0306924_104187621	3300032076	Soil	MSISNAIIGLILLALAVAGAWRWYDNHVRAQSKNQMMETAAGDVRETAECHLEAFKLRPGLTETDLQVQAAFMDICMEARGY
Ga0318518_103026681	3300032090	Soil	MSISNAIIGLILLALAVAGAWRWYDNHVRAQSKNQMMETAAGDVRETAECHLEAFKLRPGLTETDLEVQ
Ga0310914_108843831	3300033289	Soil	MLTSFKNTIIGLILLALAVAGAWSWYDGHLKSQSKDQTMETAERDVRDTAECHLEAF
Ga0310914_114606691	3300033289	Soil	MLTSFKNTIIGLILLAIAVAGAWGWYDSHLKSHSKDQMVETAERDVRETAECHLE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079448

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences