Metagenome Family F079451

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079451
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	60 residues
Representative Sequence	MSKGQWAFRPAALTRAIKAAEKAGKDVVGAKIDSVTGNFELRFQKSDASATQGEGNEWDQI
Number of Associated Samples	51
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	59.13 %
% of genes near scaffold ends (potentially truncated)	37.39 %
% of genes from short scaffolds (< 2000 bps)	90.43 %
Associated GOLD sequencing projects	44
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (70.435 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (26.956 % of family members)
Environment Ontology (ENVO)	Unclassified (55.652 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (80.870 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.61% β-sheet: 12.36% Coil/Unstructured: 73.03%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF00589	Phage_integrase	18.26
PF13356	Arm-DNA-bind_3	2.61
PF03457	HA	0.87
PF04226	Transgly_assoc	0.87
PF13493	DUF4118	0.87
PF04352	ProQ	0.87
PF02657	SufE	0.87
PF08734	GYD	0.87
PF01068	DNA_ligase_A_M	0.87
PF02518	HATPase_c	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.87
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.87
COG2166	Sulfur transfer protein SufE, Fe-S cluster assembly	Posttranslational modification, protein turnover, chaperones [O]	0.87
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.87
COG3109	sRNA-binding protein ProQ	Signal transduction mechanisms [T]	0.87
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.43 %
Unclassified	root	N/A	29.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.43 %
Unclassified	root	N/A	29.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.43 %
Unclassified	root	N/A	29.57 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	67.83 %
Unclassified	root	N/A	29.57 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	65.22 %
Unclassified	root	N/A	29.57 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.87 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.57 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	20.00 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.87 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.87 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.57 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	15.65 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.87 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.87 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.57 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.35 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.87 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.87 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.57 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.74 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.87 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.87 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.57 %
Bradyrhizobium sp. ARR65	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	1.74 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.87 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.87 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309004\|prs_FIHLEPW02SDXZX	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	507	Open in IMG/M
2070309004\|prs_FIHLEPW02TLFSE	Not Available	528	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10075782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	723	Open in IMG/M
3300005332\|Ga0066388_100187223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2683	Open in IMG/M
3300005332\|Ga0066388_100724409	Not Available	1598	Open in IMG/M
3300005332\|Ga0066388_101005411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1397	Open in IMG/M
3300005332\|Ga0066388_101816623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1084	Open in IMG/M
3300005332\|Ga0066388_102019405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1034	Open in IMG/M
3300005332\|Ga0066388_102050233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1027	Open in IMG/M
3300005332\|Ga0066388_102251638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	985	Open in IMG/M
3300005332\|Ga0066388_103275645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	827	Open in IMG/M
3300005332\|Ga0066388_107600768	Not Available	543	Open in IMG/M
3300005332\|Ga0066388_107655254	Not Available	541	Open in IMG/M
3300005332\|Ga0066388_107734911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	538	Open in IMG/M
3300005332\|Ga0066388_108737977	Not Available	503	Open in IMG/M
3300005568\|Ga0066703_10772085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	550	Open in IMG/M
3300005764\|Ga0066903_100473002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2108	Open in IMG/M
3300005764\|Ga0066903_100783689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1701	Open in IMG/M
3300005764\|Ga0066903_101076237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1479	Open in IMG/M
3300005764\|Ga0066903_101210019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1403	Open in IMG/M
3300005764\|Ga0066903_101880744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1146	Open in IMG/M
3300005764\|Ga0066903_102014478	All Organisms → cellular organisms → Bacteria → Proteobacteria	1109	Open in IMG/M
3300005764\|Ga0066903_102036925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1103	Open in IMG/M
3300005764\|Ga0066903_102244090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1053	Open in IMG/M
3300005764\|Ga0066903_102563299	Not Available	988	Open in IMG/M
3300005764\|Ga0066903_102762591	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300005764\|Ga0066903_103610634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	833	Open in IMG/M
3300005764\|Ga0066903_105913514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	642	Open in IMG/M
3300005764\|Ga0066903_106796935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	594	Open in IMG/M
3300005764\|Ga0066903_107193207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	576	Open in IMG/M
3300005764\|Ga0066903_108052617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	540	Open in IMG/M
3300005764\|Ga0066903_109149099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	500	Open in IMG/M
3300006041\|Ga0075023_100624982	Not Available	504	Open in IMG/M
3300010046\|Ga0126384_10226828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1496	Open in IMG/M
3300010046\|Ga0126384_10558857	Not Available	995	Open in IMG/M
3300010046\|Ga0126384_11359343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	661	Open in IMG/M
3300010047\|Ga0126382_11686356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	591	Open in IMG/M
3300010047\|Ga0126382_11937570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	559	Open in IMG/M
3300010048\|Ga0126373_10445719	Not Available	1328	Open in IMG/M
3300010048\|Ga0126373_10469506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1296	Open in IMG/M
3300010048\|Ga0126373_10599437	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1154	Open in IMG/M
3300010048\|Ga0126373_10894380	Not Available	952	Open in IMG/M
3300010359\|Ga0126376_12572852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	557	Open in IMG/M
3300010361\|Ga0126378_10640638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1176	Open in IMG/M
3300010376\|Ga0126381_100410810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1888	Open in IMG/M
3300010376\|Ga0126381_100909758	All Organisms → cellular organisms → Bacteria	1267	Open in IMG/M
3300010376\|Ga0126381_101206946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1093	Open in IMG/M
3300010376\|Ga0126381_101267533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1065	Open in IMG/M
3300010376\|Ga0126381_103598450	Not Available	608	Open in IMG/M
3300010376\|Ga0126381_105017782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	507	Open in IMG/M
3300010398\|Ga0126383_10051139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3442	Open in IMG/M
3300010398\|Ga0126383_13055968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	546	Open in IMG/M
3300012208\|Ga0137376_11806715	Not Available	501	Open in IMG/M
3300012211\|Ga0137377_10443747	Not Available	1236	Open in IMG/M
3300012948\|Ga0126375_11093255	Not Available	656	Open in IMG/M
3300012971\|Ga0126369_10579228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1190	Open in IMG/M
3300012971\|Ga0126369_10659527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1121	Open in IMG/M
3300012971\|Ga0126369_13361598	Not Available	524	Open in IMG/M
3300012971\|Ga0126369_13647182	Not Available	504	Open in IMG/M
3300016270\|Ga0182036_10198711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1468	Open in IMG/M
3300016270\|Ga0182036_10586042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	893	Open in IMG/M
3300016294\|Ga0182041_10111206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2036	Open in IMG/M
3300016294\|Ga0182041_10145643	All Organisms → cellular organisms → Bacteria → Proteobacteria	1820	Open in IMG/M
3300016294\|Ga0182041_10974992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	765	Open in IMG/M
3300016319\|Ga0182033_10096334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2164	Open in IMG/M
3300016319\|Ga0182033_10270843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1389	Open in IMG/M
3300016319\|Ga0182033_10434698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1116	Open in IMG/M
3300016319\|Ga0182033_10497091	Not Available	1047	Open in IMG/M
3300016341\|Ga0182035_10594734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	955	Open in IMG/M
3300016357\|Ga0182032_10213229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1478	Open in IMG/M
3300016357\|Ga0182032_10490971	Not Available	1008	Open in IMG/M
3300016387\|Ga0182040_10066372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2319	Open in IMG/M
3300016404\|Ga0182037_10136932	Not Available	1826	Open in IMG/M
3300016404\|Ga0182037_11784892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	549	Open in IMG/M
3300016422\|Ga0182039_10326155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1281	Open in IMG/M
3300019888\|Ga0193751_1000669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	25172	Open in IMG/M
3300021560\|Ga0126371_10087071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3080	Open in IMG/M
3300021560\|Ga0126371_10664469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1191	Open in IMG/M
3300021560\|Ga0126371_11238136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	882	Open in IMG/M
3300021560\|Ga0126371_11532255	Not Available	794	Open in IMG/M
3300021560\|Ga0126371_11558150	Not Available	788	Open in IMG/M
3300021560\|Ga0126371_12181597	Not Available	668	Open in IMG/M
3300021560\|Ga0126371_12322320	Not Available	648	Open in IMG/M
3300026866\|Ga0207786_118241	Not Available	563	Open in IMG/M
3300031231\|Ga0170824_108517852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2303	Open in IMG/M
3300031564\|Ga0318573_10418921	Not Available	720	Open in IMG/M
3300031572\|Ga0318515_10521905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	633	Open in IMG/M
3300031573\|Ga0310915_11016822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	578	Open in IMG/M
3300031719\|Ga0306917_10285206	Not Available	1273	Open in IMG/M
3300031744\|Ga0306918_10495425	Not Available	956	Open in IMG/M
3300031753\|Ga0307477_10220893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1315	Open in IMG/M
3300031833\|Ga0310917_10432275	Not Available	896	Open in IMG/M
3300031879\|Ga0306919_10695774	Not Available	783	Open in IMG/M
3300031880\|Ga0318544_10065259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1336	Open in IMG/M
3300031890\|Ga0306925_10086881	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3315	Open in IMG/M
3300031890\|Ga0306925_10392847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1487	Open in IMG/M
3300031897\|Ga0318520_10345639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	902	Open in IMG/M
3300031897\|Ga0318520_10385288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	855	Open in IMG/M
3300031912\|Ga0306921_12080870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	602	Open in IMG/M
3300031912\|Ga0306921_12663248	Not Available	515	Open in IMG/M
3300031942\|Ga0310916_10246871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1504	Open in IMG/M
3300031942\|Ga0310916_11032385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	685	Open in IMG/M
3300031945\|Ga0310913_11297620	Not Available	505	Open in IMG/M
3300031947\|Ga0310909_10531712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	985	Open in IMG/M
3300031954\|Ga0306926_12122706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	628	Open in IMG/M
3300031954\|Ga0306926_13027859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	501	Open in IMG/M
3300032059\|Ga0318533_10883671	Not Available	656	Open in IMG/M
3300032060\|Ga0318505_10638102	Not Available	500	Open in IMG/M
3300032063\|Ga0318504_10599298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	529	Open in IMG/M
3300032076\|Ga0306924_11181570	Not Available	829	Open in IMG/M
3300032094\|Ga0318540_10496987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	589	Open in IMG/M
3300032094\|Ga0318540_10648194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	509	Open in IMG/M
3300032261\|Ga0306920_100200111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2980	Open in IMG/M
3300032261\|Ga0306920_101824127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	857	Open in IMG/M
3300032261\|Ga0306920_104453880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	501	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.13%
Aquatic	Environmental → Aquatic	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.13%
Sediment	Environmental → Aquatic → Sediment	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.91%
Loam	Environmental → Terrestrial → Soil → Loam	25.22%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	41.74%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	25.22%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.87%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.87%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	26.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.22%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	25.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.91%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.74%
Green-Waste Compost	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Green-Waste Compost	1.74%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309004	Green-waste compost microbial communities at University of California, Davis, USA, from solid state bioreactor - Luquillo Rain Forest, Puerto Rico	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026866	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 76 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
prs_02313020	2070309004	Green-Waste Compost	MSKGQWAFRPAVLTRAIKAAEKAGKNVSGAEIDSITGKIELRFQQSGALLAETVNEWDGA
prs_03437050	2070309004	Green-Waste Compost	MSKGQWAFRPAVMTRAIKAAEKVGKVVIGTEIDSVTGKFELKFQTSGASPAETINEWDGA
AF_2010_repII_A001DRAFT_100757821	3300000793	Forest Soil	ISQENSMSKGQWAFRPAVLTRAIKAAEKAGKNVSGAEIDSITGKIELRFQQSGALLAETVNEWDGAE*
Ga0066388_1001872232	3300005332	Tropical Forest Soil	MSKGQWAFRPAVLTRAIKAAEKAGKNVLGAEIDSVTGKFELRFQQSGASPAETINEWDGAE*
Ga0066388_1007244093	3300005332	Tropical Forest Soil	MSKGQWAFRPAVLTRAIKAAEKAGKNVSGAEIDSVTGKFELRFQQSGASSAETVNEWDGAE*
Ga0066388_1010054112	3300005332	Tropical Forest Soil	MSKGQWAFRPAALTRAIKAAEKAGKIVVQVEIDSGSGNIELRFQQLGASATQREGNEWDQI*
Ga0066388_1018166231	3300005332	Tropical Forest Soil	MSKGRWPFRPGALARAIKAAEKAGKVVAGAKIDSVTGNFELRFQKSDAS
Ga0066388_1020194051	3300005332	Tropical Forest Soil	MSKGQWAFRPAVMMRAIKAAEKVGKVVIGTEIDSVTGKFELKFQTSDASATQGEGNEWDQI*
Ga0066388_1020502333	3300005332	Tropical Forest Soil	MSKGQWAFRPAVMTRAIKAAEKAGKVVVGTKIDSVAGTFELRFQKSDASATQGEGNEWDQI*
Ga0066388_1022516381	3300005332	Tropical Forest Soil	MSKGQWAFRPAVMTRAIKAAEKAGKNVVGAEIDSVSGKIELRFQQSGASPAETFNEWDGAE*
Ga0066388_1032756452	3300005332	Tropical Forest Soil	RPTALTRAIKAAEKAGKDVVGAKIDSVTGNFELRFQKSDASATQGEGNEWDQI*
Ga0066388_1076007681	3300005332	Tropical Forest Soil	MSKGRWAFRPAALTRAIKAAEKAGKDVVGARIDSVTGNFELRFQKSDASATQGEGNEWDQI*
Ga0066388_1076552542	3300005332	Tropical Forest Soil	MSKGQWAFRPAVMTRAIKAAEKAGKLVVGTKIDSVAGTFELRFQTSGASATQGEGNEWDQI*
Ga0066388_1077349111	3300005332	Tropical Forest Soil	MSKGQWAFRPAALTRAIKAAEKAGKDVVGAKIDSVTGSFELRFQKSDATATQGEGNEWDQI*
Ga0066388_1087379772	3300005332	Tropical Forest Soil	MSKSQWAFRPAALTRVIKAAEKAGQNVVGAEIDSMTGRIVLKFGKSGASPAETPDEWDRI
Ga0066703_107720852	3300005568	Soil	VMTRAIKAAEKAGKVVVGTEIDSVTGKFQLRFQTSDASATQGEGNEWDQI*
Ga0066903_1004730023	3300005764	Tropical Forest Soil	MSKGRWAFKPAALTSAIKAAEKAGKTVAMAEIDSTTGNIMLKFGESGASPAETADEWGRI
Ga0066903_1007836892	3300005764	Tropical Forest Soil	MSKGQWAFRPAVLTRAIKAAEKAGKVVVGTEIDSVSGKIELRFQTSGASATQEEGNEWDQI*
Ga0066903_1010762372	3300005764	Tropical Forest Soil	MSKGRWAFRPAALTRAIKAAEKAGKGVIAAEIDSVSGKFELRFQESSAPRAETVNEWDGAE*
Ga0066903_1012100193	3300005764	Tropical Forest Soil	AVMTRAIKAAEKAGKLVVGTKIDSVAGTFELRFQTSGASATQGEGNEWDQI*
Ga0066903_1018807442	3300005764	Tropical Forest Soil	MSKGQWAFRPVVMARAIRAAEKAGKNVVGAEIDSVSGKIELRFQKSGASPTETINEWDGAE*
Ga0066903_1020144782	3300005764	Tropical Forest Soil	MSKGRWAFRPAALTRAIKAAEKAGKNVVGAKIDSVTGNFELRFQKSDASATQGEGNEWDQI*
Ga0066903_1020369252	3300005764	Tropical Forest Soil	MSKGRWAFRPGALARAIKAAEKAGKVVVGAKIDSVTGNFELRFQKSDASATRGEGNEWDQI*
Ga0066903_1022440902	3300005764	Tropical Forest Soil	MSKGPWAFRPAVMTRAIKAAEKAGKNVVGAKIDSVTGNFELSFQKSDASATQGKGNEWDQI*
Ga0066903_1025632991	3300005764	Tropical Forest Soil	MSKGQWAFRPAALTRAIKAAEKAGKDVVGAEIDSVTGRFELRFQTSGAPATQGEGNE*
Ga0066903_1027625912	3300005764	Tropical Forest Soil	VLSRAIKAAEKAGKSVVEVEIDSVTGKIELRFQKSGASATQREGNEWDQI*
Ga0066903_1036106342	3300005764	Tropical Forest Soil	MSKGQWAFKPAALTRAIRAAEKAGKNVVRAEIDSVTGKIELRFQQSGASLAETVNEWDGAE*
Ga0066903_1059135142	3300005764	Tropical Forest Soil	MSKGQWAFRPAVLSRAIKAAEKTGKNVLGAEIDSVSGKIELKFQQSGASPAETVNEWDGAE*
Ga0066903_1067969351	3300005764	Tropical Forest Soil	TRAIKAAEKAGKDVVGAEIDSVSGKIELRFQKSGASATQREGNEWDQI*
Ga0066903_1071932071	3300005764	Tropical Forest Soil	RPAALTRAIKAAEKAGKNVVGAKIDSAAGKIELRFQESGASPAETPDEWDRI*
Ga0066903_1080526172	3300005764	Tropical Forest Soil	MSKGQWAFRPAALTRAIKAAEKAGKDVVGAEIDPVTRKILLKFHQSGASRAETVNEWDGAE*
Ga0066903_1091490991	3300005764	Tropical Forest Soil	MSKGRWAFRPAALTRAIKAAEKAGKDVVGAKIDSVTGNFELRFQKSDASATQGEGNEWDQI*
Ga0075023_1006249821	3300006041	Watersheds	MSKGQWAFRPAALTCVRAKIDSVTGKFELRFQQSGALRAETVNEWDGAE*
Ga0126384_102268281	3300010046	Tropical Forest Soil	GQWAFRPAALTRTIKAAEKAGKVVVGTKFDSVTGRFELRFQTSSASATQEEGNEWDQI*
Ga0126384_105588573	3300010046	Tropical Forest Soil	MSKGQWAFRPAVLSRAIKAAEKAGKSVVEVEIDSVTGKIELRFQKSGASATQREGNEWDQI*
Ga0126384_113593432	3300010046	Tropical Forest Soil	MSKGQWAFRPAALTRAIKAAEKAGKVVVGTEIDSVTGRFELRFLTSGASPAETTNEWDGAE*
Ga0126382_116863562	3300010047	Tropical Forest Soil	FRPAALTRAIKAAEKAGKDVVGAKIDSVTGNFELRFQKSDASATQGEGNEWDQI*
Ga0126382_119375702	3300010047	Tropical Forest Soil	SRAIKAAEKAGKSVIEVEIDSVTGKIELRFQKSGASATQREGNEWDQI*
Ga0126373_104457192	3300010048	Tropical Forest Soil	MSKGQWAFRPAALTRAIKAAEKAGKDVVGAKIDSVTGNFELRFQKSDASATQGEGNEWDQI*
Ga0126373_104695061	3300010048	Tropical Forest Soil	MSKGQWAFRPAVLTRAIKAAEKAGKNVSGAEIDSITGKIELRFQQSGALLAETVNEWDGAE*
Ga0126373_105994372	3300010048	Tropical Forest Soil	MSKGQWAFRPAVMTRAIKAAEKAGKLVVGTKIDSVVGTFELRFQTSGASATQGEGNEWDQI*
Ga0126373_108943801	3300010048	Tropical Forest Soil	MSKGRWAFRPAVLTRAIKAAEKAGKNVLGVEIDSVTGKIVLKFDQFGASPAETAEEWDRI
Ga0126376_125728521	3300010359	Tropical Forest Soil	TVFSQGIIQMSKGRWAFRPAALTRAIKAAEKAGKDVVGAKIDSVTGNFELRFQKSDASATQGEGNEWDQI*
Ga0126378_106406383	3300010361	Tropical Forest Soil	MSKGQWAFRSAALTRTIKAAEKAGKVVVGTKFDSVTGRFELGFQTSSASATQEEGNEWDQI*
Ga0126381_1004108102	3300010376	Tropical Forest Soil	MSKGRWPFRPGALARAIKAAEKAGKVVVGAKIDSVTGNFELRFQKSDASATRGEGNEWDQI*
Ga0126381_1009097583	3300010376	Tropical Forest Soil	NQMSKGQWAFRPAALTRTIKAAEKAGKVVVGIKFDSVTGRFELRFQTSSASATQEEGNEWDQI*
Ga0126381_1012069461	3300010376	Tropical Forest Soil	RIAHRPLCFFTGKSMSKGQWAFRPAVLTRAIKAAEKAGKSVLGAEIDSVTGKIELRFQQSGASLAETVNEWDGAE*
Ga0126381_1012675332	3300010376	Tropical Forest Soil	MSKGRWAFRPAVLTRAIKAAEKAGKNVLGVEIDSISGKIELRFQRSGASLAETVNEWDGAE*
Ga0126381_1035984502	3300010376	Tropical Forest Soil	LVALRLDLDFPAAAPFKQENSMSKGQWAFRPAVLTRAIKAAEKAGKDVLGAEIDSASGKIELRFQKSGASPAETINEWDGAE*
Ga0126381_1050177822	3300010376	Tropical Forest Soil	MSKGRWAFRPAALTRAIKAAEKAGKDVVGAEIDPVTRKILLKFHQSGASRAETVNEWDGAE*
Ga0126383_100511396	3300010398	Tropical Forest Soil	MSKGQWAFRPAALTRTIKAAEKAGKVVVGTKFDSVTGRFELRFQTSSASATQEEGNEWDQI*
Ga0126383_130559681	3300010398	Tropical Forest Soil	MSKGQWAFRPAALTRAIKAAEKAGKVVVGTEIDSVTGRFELRFQTSGASPAETTNEWDGAE*
Ga0137376_118067151	3300012208	Vadose Zone Soil	MTRAIKAAEKAGKVVVGTEIDSVTGKFQLRFQTSDASATQGEG
Ga0137377_104437474	3300012211	Vadose Zone Soil	MSKAQWAFRPAVLMRAIKAAEKAGKNVVGAEIDSASGKIELRFQKSGASPAETVNEWDGAE*
Ga0126375_110932552	3300012948	Tropical Forest Soil	IQMSKGQWAFRPAALTRAIKAAEKAGKVVVGTEIDSVTGRFELRFQTSGASPAETTNEWDGAE*
Ga0126369_105792282	3300012971	Tropical Forest Soil	QWAFRPAVLTRAIKAAEKAGKVVVGTEIDSVSGKIELRFQTSGASATQEEGNEWDQI*
Ga0126369_106595271	3300012971	Tropical Forest Soil	GRWAFRPAALTRAIKAAEKAGKDVVGARIDSVTGNFELRFQKSDASATQGEGNEWDQI*
Ga0126369_133615982	3300012971	Tropical Forest Soil	MSKGQWAFRPAVLTRAIKAAEKAGKNVSGAEIDSITGKIELRFQRSGALLAETVNEWDGAE*
Ga0126369_136471822	3300012971	Tropical Forest Soil	MSKGQWAFRPAVMTRAIKAAEKAGKDVVGAKIDSVTGNFELRFQKSDASATQGEGNEWDQI*
Ga0182036_101987112	3300016270	Soil	RQLRLLRFSYRKIQMSKGQWAFRPAVMTRAIKAAEKAGKLVVGTKIDSVAGTFELRFQTSGASATQGEGNEWDQI
Ga0182036_105860422	3300016270	Soil	MSKGQWAFRPAMLTRAIKAAEKAGKDVVGAEIDSVSGKIELRFQKLGASATQREGNEWDQ
Ga0182041_101112065	3300016294	Soil	RAIKAAEKAGKDVVGAEIDSASGKIELRFQNYGASAIQREGNEWDQI
Ga0182041_101456431	3300016294	Soil	IQMSKGRWAFRPAALTRAIKAAEKAGKDVVGAKIDSVTGNFELRFRKADASATQGEGNEWDQI
Ga0182041_109749922	3300016294	Soil	MSKGRWAFRPGTLTCAIKAAEKAGKDVVGAKIDSVTGNFELRFQKSDASATRGEVNEWDQ
Ga0182033_100963343	3300016319	Soil	MLTRAIKAAEKAGKDVVGAEIDSASGKIELRFQNYGASAIQREGNEWDQI
Ga0182033_102708433	3300016319	Soil	MSKGQWAFRPAVLTRAIKAAEKAGKNGFGAEIDSVTGKIELRFQQSGASLAETVNEWDGA
Ga0182033_104346982	3300016319	Soil	AFRPAALTRAIKAAEKAGKNVVGAKIDSVTGTFELRFQKSDASATQGEGNEWDQI
Ga0182033_104970911	3300016319	Soil	KGQWAFRPAALTRAIKAAEKAGKDVVGAKIDSVTGNFELRFQKSDASAAQGEGNEWDQI
Ga0182035_105947341	3300016341	Soil	LRLLRFSYRKIQMSKGQWAFRPAVMTRAIKAAEKAGKNVSGAEIDSITGKIELRFQQSGALLAETVNEWDGAE
Ga0182032_102132293	3300016357	Soil	QLPRRKWARIAPFIQEDSMSKGQWAFRPAALTRAIKAAEKAGKDVVGAKIDSVTGNFELRFQKADASATQGEGNEWDQI
Ga0182032_104909713	3300016357	Soil	FRAIKAAEKAGKDVVGVEIDSVSGKIELRFQRSGASLAAR
Ga0182040_100663723	3300016387	Soil	CRQLRLLRFSYRKIQMSKGQWAFRPAVMTRAIKAAEKAGKLVVGTKIDSVAGTFELRFQTSGASATQGEGNEWDQI
Ga0182037_101369323	3300016404	Soil	MLTRAIKAAEKAGKDVVGAEIDSVSGKIELRFQKSGASATQREGNEWDQI
Ga0182037_117848922	3300016404	Soil	IAPFIQEDSMSKGQWAFRPAALTRAIKAAEKAGKNVVGAEINSVTGKFELRFQKSGASPAETTNEWDGAE
Ga0182039_103261551	3300016422	Soil	KAAEKAGKNVVGATIDSVTGNFELRFQKSDASATQGEGNEWDQI
Ga0193751_100066911	3300019888	Soil	MSKAQWAFRPAVLTRAIKAAEKAGKNVVGAEIDSANGKIELRFQKSGALPAETVNEWDGA
Ga0126371_100870712	3300021560	Tropical Forest Soil	MSKGQWAFKPAALTRAIRAAEKAGKNVVRAEIDSVTGKIELRFQQSGASLAETVNEWDGA
Ga0126371_106644691	3300021560	Tropical Forest Soil	MSKGQWAFRPAVLTRAIKAAEKAGKVVVGTEIDSVSGKIELRFQTSGASATQEEGNEWDQ
Ga0126371_112381362	3300021560	Tropical Forest Soil	MSKGQWAFRPAVMTRAIKAAEKAGKLVVGTKIDSVAGTFELRFQTSGASATQGEGNEWDQ
Ga0126371_115322551	3300021560	Tropical Forest Soil	RRADGRPFTLGKNQMSKGQWAFRPAALARAIKAAEKAGKDVVGAEIDPVTRKILLKFHQSGASRAETVNEWDGAE
Ga0126371_115581502	3300021560	Tropical Forest Soil	MSKSRWAFRPAVLTRAIKAAEKAGKNVLEAEIDSVTGKIELRFQKSGASLAETVNEWDWA
Ga0126371_121815971	3300021560	Tropical Forest Soil	MSKGQWAFRPAVMTRAIKAAEKAGKDVVGAKIDSVTGNFELRFQKSDASATQGEGNEWDQ
Ga0126371_123223202	3300021560	Tropical Forest Soil	MSKGQWAFRPTEVTRAIKAAEKAGKTVAEADIDPSTGKIVLKFRESGASSDVNEWLEGAE
Ga0207786_1182411	3300026866	Tropical Forest Soil	MSKGQWAFRPAVLTRAIKAAEKAGKDVVGAEIDSVSGKIELRFQQFGASLAEIVNEWDGA
Ga0170824_1085178522	3300031231	Forest Soil	MSKAQWAFRPAVLMRAIKAAEKAGKNVVGAEIDSASGKIELRFQKSSASLAETVNEWDGA
Ga0318573_104189212	3300031564	Soil	MSKGQWAFRPAMLTRAIKAAEKAGKDVVGAEIDSASGKIELRFQNYGASAIQREGNEWDQ
Ga0318515_105219051	3300031572	Soil	QWAFRPAVMTRAIKAAEKAGKLVVGTKIDSVAGTFELRFQTSGASATQGEGNEWDQI
Ga0310915_110168222	3300031573	Soil	MSKGQWAFRPAALTRAIKAAEKAGKNVVGAKIDSVTGTFELRFQKSDASATQGEGNEWDQ
Ga0306917_102852061	3300031719	Soil	MSKGQWAFRPAALTRAIKAAEKAGKNVAVAKINSVSGKIELRFQESGASPAETVNEWDGA
Ga0306918_104954251	3300031744	Soil	MSKGQWAFRPAALISAIKAAEKAGKDVVGAEIDPVTRKILLKFHQSGASRAETVNEWDGA
Ga0307477_102208932	3300031753	Hardwood Forest Soil	MSKGQWAFRSAVLTRAIKAAEKAGKNVVGAEIDSVTGKFELRFQKCGALFVETVNEWDRA
Ga0310917_104322751	3300031833	Soil	TGKFQITKGQWAFRPAALTRAIKAAEKAGKDVVGAKIDSVTGNFELRFQKSDASATQGEGNEWDQI
Ga0306919_106957741	3300031879	Soil	MSKGQWAFRPAALTRAIKAAEKAGKNVVGAEINSVTGKFELRFQKSGASPAETTNEWDGA
Ga0318544_100652592	3300031880	Soil	MSKGQWAFRPAVMTRAIKAAEKAGKLVVGTKIDSVAGTFELRFQTSAASATQGEGNEWDQ
Ga0306925_100868813	3300031890	Soil	MSKGQWAFRPAVMTRAIKAAEKAGKLVVGTKIDSVAGTFELRFQTSSASATQGEGNEWDQ
Ga0306925_103928473	3300031890	Soil	MSKGQWAFRPAVLTRAIKAAEKAGKDVVGAEIDSVSGKIELRFQKLGASATQREGNEWDQ
Ga0318520_103456393	3300031897	Soil	MLTRAIKAAEKAGKDVVGAEIDSASGKIELRFQNYGASATQREGNEWDQI
Ga0318520_103852882	3300031897	Soil	MTRAIKAAEKAGKLVVGTKIDSVAGTFELRFQTSGASATQGEGNEWDQI
Ga0306921_120808702	3300031912	Soil	MSKGQWAFRPAMLTRAIKAAEKAGKSVVGAKIDSASGKIELRFHECGSTATQGEGNEWDR
Ga0306921_126632482	3300031912	Soil	QMSKGQWAFRPAVLTRAIKAAEKAGKNVFGAEIDSVTGKIELRFQQSGASLAETVNEWDGAE
Ga0310916_102468713	3300031942	Soil	MSKGRWAFRPAALTRAIKAAEKAGKNVVGAKIDSVTGNFELRFQKSDASAAQGEGNEWDQ
Ga0310916_110323852	3300031942	Soil	MSKGQWAFRPAALTRAIKAAEKAGKDVVGAKIDSVTGNFELRFQKSDASATQGEGNEWDQ
Ga0310913_112976202	3300031945	Soil	MSKGQWAFRPAALISAIKAAEKAGKDVVGAEIDPVTRKILLKFHQSGASRAETVNEWDG
Ga0310909_105317122	3300031947	Soil	MSKGQWAFRPAALTRAIKAAEKAGKNVVGAKIDSVTGNFELRFQKSDASAAQGEGNEWDQ
Ga0306926_121227062	3300031954	Soil	MSKGRWAFRPAALTRAIKAAEKAGKNVVGAKIDSVTGTFELRFQKSDASATQGEGNEWDQ
Ga0306926_130278592	3300031954	Soil	LRLLRFSYRKIQMSKGQWAFRPAALTRAIKAAEKAGKDVVGAKIDSVTGNFELRFQKSDASATQGEGNEWDQI
Ga0318533_108836711	3300032059	Soil	KLPIARRQYLRKIQMSKGQWAFRPAVLTRAIKAAEKAGKNVSGAEIDSITGKIELRFQQSGALLAETVNEWDGAE
Ga0318505_106381022	3300032060	Soil	MSKGQWAFRPAVMTRAIKAAEKAGKLVVGTKIDSVAGTFELRFQTSGASATQGEG
Ga0318504_105992981	3300032063	Soil	SKGQWAFRPAMLTRAIKAAEKAGKDVVGAEIDSASGKIELRFQNYGASAIQREGNEWDQI
Ga0306924_111815704	3300032076	Soil	MSKGRWAFRPAALTRAIKAAEKAGKNVVGAKIDSVTGNFELRFQKSDASATQGEGNEWDQ
Ga0318540_104969872	3300032094	Soil	MSKGQWAFRPAVLTRAIKAAEKAGKNVSGAEIDSITGKIELRFQQSGALLTETVNEWDGA
Ga0318540_106481942	3300032094	Soil	TRAIKAAEKAGKDVVGAKIDSVTGNFELRFQKSDASATQGEGNEWDQI
Ga0306920_1002001111	3300032261	Soil	SGKIQMSKGQWAFRPAVMTRAIKAAEKAGKLVVGTKIDSVAGTFELRFQTSGASATQGEGNEWDQI
Ga0306920_1018241271	3300032261	Soil	RQLRLLRFSYRKIQMSKGQWAFRPAVLTRAIKAAEKAGKNVSGAEIDSITGKIELRFQQSGALLAETVNEWDGAE
Ga0306920_1044538802	3300032261	Soil	MSKGRWAFRPGTLTCAIKAAEKAGKNVTGAEIDSVTGKFELRFERSGASTTQGEGNEWDQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079451

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences