Metagenome Family F079517

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079517
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	58 residues
Representative Sequence	MSIPVINVSPNLPLPPQQYDQHYFDALTKVLRLYFTSNDNVNQVISNQVSTNQALIWLGV
Number of Associated Samples	72
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	78.45 %
% of genes near scaffold ends (potentially truncated)	38.26 %
% of genes from short scaffolds (< 2000 bps)	69.57 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (60.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater (58.261 % of family members)
Environment Ontology (ENVO)	Unclassified (89.565 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (85.217 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.05% β-sheet: 0.00% Coil/Unstructured: 57.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF00182	Glyco_hydro_19	7.83
PF08291	Peptidase_M15_3	1.74
PF01507	PAPS_reduct	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG3179	Chitinase, GH19 family	Carbohydrate transport and metabolism [G]	7.83
COG3979	Chitodextrinase	Carbohydrate transport and metabolism [G]	7.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
All Organisms	root	All Organisms	40.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
cellular organisms	root	All Organisms → cellular organisms	26.96 %
Viruses	superkingdom	All Organisms → Viruses	13.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	26.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.83 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	5.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	13.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.96 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	5.22 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	13.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.83 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	5.22 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.74 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	13.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.83 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	5.22 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	1.74 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	13.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.83 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	5.22 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.87 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	13.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.83 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5.22 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.87 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
unclassified Verrucomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae	13.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.83 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5.22 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.87 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.00 %
Verrucomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	13.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.83 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5.22 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.87 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000162\|TB03JUN2009H_c016647	Not Available	891	Open in IMG/M
3300002091\|JGI24028J26656_1000606	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	10415	Open in IMG/M
3300002091\|JGI24028J26656_1002295	Not Available	3609	Open in IMG/M
3300002091\|JGI24028J26656_1003623	All Organisms → cellular organisms → Bacteria → Proteobacteria	2560	Open in IMG/M
3300002092\|JGI24218J26658_1010682	All Organisms → cellular organisms → Bacteria	1516	Open in IMG/M
3300002092\|JGI24218J26658_1013675	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1249	Open in IMG/M
3300002092\|JGI24218J26658_1034164	Not Available	608	Open in IMG/M
3300002098\|JGI24219J26650_1007798	Not Available	1968	Open in IMG/M
3300002098\|JGI24219J26650_1008611	Not Available	1814	Open in IMG/M
3300002307\|JGI24890J29729_1014660	Not Available	2035	Open in IMG/M
3300002933\|G310J44882_10007889	All Organisms → Viruses → Predicted Viral	3368	Open in IMG/M
3300003375\|JGI26470J50227_1001801	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7318	Open in IMG/M
3300003375\|JGI26470J50227_1003214	Not Available	4992	Open in IMG/M
3300003375\|JGI26470J50227_1008954	All Organisms → cellular organisms → Bacteria	2567	Open in IMG/M
3300003375\|JGI26470J50227_1014439	Not Available	1871	Open in IMG/M
3300003375\|JGI26470J50227_1019496	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	1511	Open in IMG/M
3300003375\|JGI26470J50227_1023396	Not Available	1319	Open in IMG/M
3300003375\|JGI26470J50227_1023832	Not Available	1301	Open in IMG/M
3300003375\|JGI26470J50227_1026760	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300003375\|JGI26470J50227_1027055	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	1179	Open in IMG/M
3300003375\|JGI26470J50227_1041173	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	855	Open in IMG/M
3300003375\|JGI26470J50227_1045779	Not Available	786	Open in IMG/M
3300003375\|JGI26470J50227_1058895	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	645	Open in IMG/M
3300003375\|JGI26470J50227_1064622	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	599	Open in IMG/M
3300003375\|JGI26470J50227_1066226	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	588	Open in IMG/M
3300003787\|Ga0007811_1000039	All Organisms → cellular organisms → Bacteria	20137	Open in IMG/M
3300003789\|Ga0007835_1005028	Not Available	1348	Open in IMG/M
3300003789\|Ga0007835_1006465	Not Available	1139	Open in IMG/M
3300003797\|Ga0007846_1006307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	1295	Open in IMG/M
3300003809\|Ga0007869_1007525	Not Available	1148	Open in IMG/M
3300003812\|Ga0007861_1022155	Not Available	535	Open in IMG/M
3300003813\|Ga0007879_1020576	Not Available	676	Open in IMG/M
3300003814\|Ga0007877_1003588	Not Available	2352	Open in IMG/M
3300003815\|Ga0007856_1001722	All Organisms → Viruses → Predicted Viral	2158	Open in IMG/M
3300004095\|Ga0007829_10048193	Not Available	826	Open in IMG/M
3300004684\|Ga0065168_1002070	All Organisms → cellular organisms → Bacteria	3331	Open in IMG/M
3300004685\|Ga0065177_1004554	All Organisms → Viruses → Predicted Viral	2537	Open in IMG/M
3300004686\|Ga0065173_1003960	Not Available	2751	Open in IMG/M
3300004686\|Ga0065173_1037349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	885	Open in IMG/M
3300004691\|Ga0065176_1009888	Not Available	874	Open in IMG/M
3300004694\|Ga0065170_1010907	All Organisms → cellular organisms → Bacteria → Proteobacteria	1221	Open in IMG/M
3300004694\|Ga0065170_1050526	Not Available	558	Open in IMG/M
3300004807\|Ga0007809_10087813	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	960	Open in IMG/M
3300004807\|Ga0007809_10229255	Not Available	531	Open in IMG/M
3300006071\|Ga0007876_1019078	Not Available	1937	Open in IMG/M
3300006071\|Ga0007876_1062341	All Organisms → cellular organisms → Bacteria → Proteobacteria	995	Open in IMG/M
3300006071\|Ga0007876_1076713	Not Available	880	Open in IMG/M
3300006072\|Ga0007881_1003748	Not Available	5195	Open in IMG/M
3300006103\|Ga0007813_1021687	Not Available	1502	Open in IMG/M
3300006104\|Ga0007882_10205694	Not Available	667	Open in IMG/M
3300006106\|Ga0007833_1083829	Not Available	568	Open in IMG/M
3300006110\|Ga0007871_1052937	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300006115\|Ga0007816_1087046	Not Available	690	Open in IMG/M
3300006119\|Ga0007866_1053169	Not Available	767	Open in IMG/M
3300006121\|Ga0007824_1009353	Not Available	2105	Open in IMG/M
3300006122\|Ga0007837_1028861	Not Available	942	Open in IMG/M
3300006123\|Ga0007852_1032275	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	1263	Open in IMG/M
3300006127\|Ga0007805_1036687	Not Available	1102	Open in IMG/M
3300009175\|Ga0073936_10231155	Not Available	1270	Open in IMG/M
3300009502\|Ga0114951_10212073	Not Available	1032	Open in IMG/M
3300013093\|Ga0164296_1070241	Not Available	1566	Open in IMG/M
3300013093\|Ga0164296_1241289	Not Available	687	Open in IMG/M
3300013093\|Ga0164296_1375017	Not Available	528	Open in IMG/M
3300020702\|Ga0214218_1013083	Not Available	875	Open in IMG/M
3300020727\|Ga0214246_1009963	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	1766	Open in IMG/M
3300020733\|Ga0214172_1000288	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	25528	Open in IMG/M
3300020735\|Ga0214219_1021040	Not Available	1071	Open in IMG/M
3300021131\|Ga0214206_1029440	Not Available	638	Open in IMG/M
3300021133\|Ga0214175_1037212	Not Available	592	Open in IMG/M
3300021139\|Ga0214166_1088233	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	621	Open in IMG/M
3300022555\|Ga0212088_10010856	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	14407	Open in IMG/M
3300022555\|Ga0212088_10032973	All Organisms → cellular organisms → Bacteria → Proteobacteria	6191	Open in IMG/M
3300022555\|Ga0212088_10146620	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	2005	Open in IMG/M
3300022602\|Ga0248169_102872	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	20515	Open in IMG/M
3300022602\|Ga0248169_110200	All Organisms → cellular organisms → Bacteria → Proteobacteria	7439	Open in IMG/M
3300025162\|Ga0209083_1010460	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5464	Open in IMG/M
3300025336\|Ga0208619_113599	Not Available	599	Open in IMG/M
3300025339\|Ga0208502_1010615	Not Available	792	Open in IMG/M
3300025339\|Ga0208502_1020371	Not Available	566	Open in IMG/M
3300025357\|Ga0208383_1001119	All Organisms → Viruses → Predicted Viral	4386	Open in IMG/M
3300025369\|Ga0208382_1014383	All Organisms → Viruses → Predicted Viral	1158	Open in IMG/M
3300025372\|Ga0207957_1001532	All Organisms → Viruses → Predicted Viral	4754	Open in IMG/M
3300025379\|Ga0208738_1004615	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	2619	Open in IMG/M
3300025382\|Ga0208256_1005186	Not Available	2255	Open in IMG/M
3300025382\|Ga0208256_1018210	Not Available	1061	Open in IMG/M
3300025383\|Ga0208250_1006708	All Organisms → Viruses → Predicted Viral	2326	Open in IMG/M
3300025387\|Ga0207959_1005801	All Organisms → Viruses → Predicted Viral	2370	Open in IMG/M
3300025389\|Ga0208257_1047253	Not Available	609	Open in IMG/M
3300025401\|Ga0207955_1007033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2407	Open in IMG/M
3300025407\|Ga0208378_1029204	Not Available	961	Open in IMG/M
3300025410\|Ga0208875_1078083	Not Available	501	Open in IMG/M
3300025410\|Ga0208875_1078234	Not Available	501	Open in IMG/M
3300025421\|Ga0207958_1030756	Not Available	837	Open in IMG/M
3300025429\|Ga0208500_1011608	Not Available	1290	Open in IMG/M
3300025470\|Ga0208389_1043689	Not Available	868	Open in IMG/M
3300025723\|Ga0208741_10167033	Not Available	522	Open in IMG/M
3300025785\|Ga0208498_1003943	Not Available	3800	Open in IMG/M
3300027708\|Ga0209188_1006436	All Organisms → cellular organisms → Bacteria → Proteobacteria	7322	Open in IMG/M
3300027896\|Ga0209777_10095058	Not Available	2553	Open in IMG/M
3300027896\|Ga0209777_10192632	Not Available	1645	Open in IMG/M
3300027896\|Ga0209777_10573891	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	820	Open in IMG/M
3300027896\|Ga0209777_10764769	Not Available	681	Open in IMG/M
3300027896\|Ga0209777_10927250	Not Available	601	Open in IMG/M
3300027896\|Ga0209777_11060781	Not Available	550	Open in IMG/M
3300027896\|Ga0209777_11083948	Not Available	542	Open in IMG/M
3300031759\|Ga0316219_1090270	Not Available	1186	Open in IMG/M
3300031759\|Ga0316219_1299044	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	552	Open in IMG/M
3300032117\|Ga0316218_1067952	All Organisms → Viruses → Predicted Viral	1465	Open in IMG/M
3300032665\|Ga0316221_1015410	Not Available	4005	Open in IMG/M
3300032665\|Ga0316221_1119657	Not Available	942	Open in IMG/M
3300032665\|Ga0316221_1214040	Not Available	635	Open in IMG/M
3300032677\|Ga0316227_1123929	Not Available	974	Open in IMG/M
3300032677\|Ga0316227_1152357	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	845	Open in IMG/M
3300032677\|Ga0316227_1192801	Not Available	719	Open in IMG/M
3300032753\|Ga0316224_1015230	Not Available	4034	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	100.00%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	89.57%
Lake	Environmental → Aquatic → Freshwater → Lake	10.43%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	66.09%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	13.04%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	10.43%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	6.96%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	3.48%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	58.26%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	13.04%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	7.83%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	6.09%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	4.35%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	3.48%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	3.48%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.74%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater	0.87%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000162	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 hypolimnion	Environmental	Open in IMG/M
3300002091	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-F8 metagenome	Environmental	Open in IMG/M
3300002092	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B6 metagenome	Environmental	Open in IMG/M
3300002098	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B7 metagenome	Environmental	Open in IMG/M
3300002307	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-C2 co-culture F-D7	Environmental	Open in IMG/M
3300002933	Combined Assembly of freshwater hypolimnion microbial communities from Trout Bog Lake, Wisconsin, USA	Environmental	Open in IMG/M
3300003375	Freshwater actinobacteria microbial communities from Trout Bog Lake, Wisconsin, USA - enrichment TB-E6	Environmental	Open in IMG/M
3300003787	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09	Environmental	Open in IMG/M
3300003789	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE28Sep08	Environmental	Open in IMG/M
3300003797	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE19Jun07	Environmental	Open in IMG/M
3300003809	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH03Jun09	Environmental	Open in IMG/M
3300003812	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH22Jun08	Environmental	Open in IMG/M
3300003813	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH15Jun09	Environmental	Open in IMG/M
3300003814	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Jul09	Environmental	Open in IMG/M
3300003815	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07	Environmental	Open in IMG/M
3300004095	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE03Jun09	Environmental	Open in IMG/M
3300004684	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE23Jun09 (version 2)	Environmental	Open in IMG/M
3300004685	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Jul08 (version 2)	Environmental	Open in IMG/M
3300004686	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Oct08 (version 2)	Environmental	Open in IMG/M
3300004691	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Jul07 (version 2)	Environmental	Open in IMG/M
3300004694	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE17Sep08 (version 2)	Environmental	Open in IMG/M
3300004807	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07	Environmental	Open in IMG/M
3300006071	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Aug09	Environmental	Open in IMG/M
3300006072	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09	Environmental	Open in IMG/M
3300006103	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29Jun09	Environmental	Open in IMG/M
3300006104	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09.1	Environmental	Open in IMG/M
3300006106	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Jul07	Environmental	Open in IMG/M
3300006110	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH08Jun09	Environmental	Open in IMG/M
3300006115	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jul09	Environmental	Open in IMG/M
3300006119	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Jul07	Environmental	Open in IMG/M
3300006121	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE05Oct08	Environmental	Open in IMG/M
3300006122	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE31Jul07	Environmental	Open in IMG/M
3300006123	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH28Sep08	Environmental	Open in IMG/M
3300006127	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE24Aug09	Environmental	Open in IMG/M
3300009175	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG	Environmental	Open in IMG/M
3300009502	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG	Environmental	Open in IMG/M
3300013093	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES057 metaG	Environmental	Open in IMG/M
3300020702	Freshwater microbial communities from Trout Bog Lake, WI - 12JUL2007 hypolimnion	Environmental	Open in IMG/M
3300020727	Freshwater microbial communities from Trout Bog Lake, WI - 29MAY2009 hypolimnion	Environmental	Open in IMG/M
3300020733	Freshwater microbial communities from Trout Bog Lake, WI - 12JUL2007 epilimnion	Environmental	Open in IMG/M
3300020735	Freshwater microbial communities from Trout Bog Lake, WI - 25JUL2007 hypolimnion	Environmental	Open in IMG/M
3300021131	Freshwater microbial communities from Trout Bog Lake, WI - 07JUL2009 epilimnion	Environmental	Open in IMG/M
3300021133	Freshwater microbial communities from Trout Bog Lake, WI - 09AUG2007 epilimnion	Environmental	Open in IMG/M
3300021139	Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 epilimnion	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300022602	Freshwater microbial communities from Trout Bog Lake, Vilas County, Wisconsin, United States - 30JULY2014 epilimnion	Environmental	Open in IMG/M
3300025162	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG (SPAdes)	Environmental	Open in IMG/M
3300025336	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025339	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025357	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Sep07 (SPAdes)	Environmental	Open in IMG/M
3300025369	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE28Sep08 (SPAdes)	Environmental	Open in IMG/M
3300025372	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025379	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025382	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH22Jun08 (SPAdes)	Environmental	Open in IMG/M
3300025383	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025387	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH20Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025389	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Sep07 (SPAdes)	Environmental	Open in IMG/M
3300025401	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025407	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE24Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025410	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH25Aug08 (SPAdes)	Environmental	Open in IMG/M
3300025421	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025429	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE17Sep08 (SPAdes)	Environmental	Open in IMG/M
3300025470	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025723	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE03Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025785	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE12Aug09 (SPAdes)	Environmental	Open in IMG/M
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300031759	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003P	Environmental	Open in IMG/M
3300032117	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003	Environmental	Open in IMG/M
3300032665	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18007	Environmental	Open in IMG/M
3300032677	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18019	Environmental	Open in IMG/M
3300032753	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18013	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB03JUN2009H_0166472	3300000162	Freshwater	MSIPVINVSPNLPLPPKEYDQAYLDNLTKVLRLYFTSNDNVNQIGMNQVSTNQTLIWLG
JGI24028J26656_10006067	3300002091	Lentic	MSIPIINVSPNLPLPPQQYDQAYFDTLTKVLRLYFVSNDNVNQVGMNQVSASQALIWLNL
JGI24028J26656_10022951	3300002091	Lentic	KGELVSIPVINVSPNLPVPPDKYDQAYFNALTKVLRLYFTNNDNIDQIGMAQVSTNQTLIWLNL*
JGI24028J26656_10036234	3300002091	Lentic	MSIPVINVSPNLPLPPQQYDQHYFDVLTKVLRLYFTSNDNINQIAVAQISSNQTLMWLGL
JGI24218J26658_10106823	3300002092	Lentic	MSIPIINVAPNLPLPPREYDQAYLDSLTKVLRLYFVSNDNVNQVGMNQVSSSQALIWLNL
JGI24218J26658_10136752	3300002092	Lentic	MSIPVINVAPNLPLPPKQYDQAYLDSLTKVLRLYFATNDNFNQVIANQVSSSQALIWLNX
JGI24218J26658_10341641	3300002092	Lentic	SVSPNLPQPPKEYDQLYFDTLTKVLRLYFVNNDNVNSVGMNQVSASQALIWLNL*
JGI24219J26650_10077982	3300002098	Lentic	MSIPVINVAPNLPLPPKQYDQAYLDSLTKVLRLYFATNDNFNQVIANQVSSSQALIWLNL
JGI24219J26650_10086111	3300002098	Lentic	KGELVSIPVINVSPNLPVPPDKYDQAYFNALTKVLRLYFTNNDNIDQIGMAQVSTNQTLIWLNX*
JGI24890J29729_10146603	3300002307	Lentic	LVSIPVINVSPNLPVPPDKYDQAYFNALTKVLRLYFTNNDNIDQIGMAQVSTNQTLIWLNL*
G310J44882_100078893	3300002933	Freshwater	MTIPVINVSPNLPLPPRAYDPVYLDNLTKVLRLYFASNDNVNQVGMNQVSTNQALIWLGL
JGI26470J50227_10018016	3300003375	Freshwater	MSIPVINVSPNLPLPPAEYDKQYLENLTKVLRLYFVSNDNVNQIGMNQVSTNQTLIWLGV
JGI26470J50227_10032143	3300003375	Freshwater	MSIPVINVSPNLPLPPKQYDQAYIDTLTKVLRLYFTSNDNVNQVISNQVSTNQTLIWLGV
JGI26470J50227_10089542	3300003375	Freshwater	MSIPIINVAPNLPLPPQTYDQHYFDALTKVLRLYFASNDNFNQVVSNQVATNQALIWLGV
JGI26470J50227_10144393	3300003375	Freshwater	MSIPVINVAPNLPLPPQQYDQHYFDALTKVLRLYFTSNDNVNXVISNQVSTNQALIWLGV
JGI26470J50227_10194962	3300003375	Freshwater	MSIPIINVAPNLPLPPAQYSQAYFDALTKVLRLYFASNDNFNQVISNQVSTNQALIWLGV
JGI26470J50227_10233962	3300003375	Freshwater	MSIPVINVSPNLPLPPQQYDQHYFDALTKVLRLYFTSNDNVNQVISNQVSTNQALIWLGV
JGI26470J50227_10238322	3300003375	Freshwater	MSIPVINVAPNLPQPTLQYDQQYFDILTKVLRLYFASNDNVNQVIANQVSSSQALIWLNL
JGI26470J50227_10267602	3300003375	Freshwater	MSIPVINVAPNLPLPSQTYDQHYFDTLTKVLRLYFASNDNVNQVISNQVSTNQALIWLGV
JGI26470J50227_10270553	3300003375	Freshwater	MSIPIINVAPNLPLPSQTYDQHYFDALTKVLRLYFASNDNFNQVVSNQVATNQALIWLGV
JGI26470J50227_10411732	3300003375	Freshwater	MSIPIINVAPNLPLPSQTYDQHYFDTLTKVLRLYFASNDNFNQVVSNQVATNQALIWLGV
JGI26470J50227_10457792	3300003375	Freshwater	MSIPVINVAPNLPLPSSEYDQHYLDNLTKVLRLYFVSNDNFNQVISNQVSTNQALIWLGV
JGI26470J50227_10588952	3300003375	Freshwater	MTIPVINVAPNLPLPPQQYDQAYFDTLTKVLRLYFVSNDNINQIGMNQVSTNQALIWLGV
JGI26470J50227_10646222	3300003375	Freshwater	MSIPIINVAPNLPQPPMQYDQQYFDILTKVLRLYFASNDNVNQVISNQVSSSQALIWLNL
JGI26470J50227_10662262	3300003375	Freshwater	MSIPVINVSPNLPLPPKEYDQAYFDTLTKVLRLYFVSNDNVNQIGMNQVSTNQTLIWLGV
Ga0007811_10000393	3300003787	Freshwater	MSIPVINVSPNLPLPSQQYDQQYFETLTKVLRLYFASNDNVNQVISNQVSTNQTLIWLGV
Ga0007835_10050282	3300003789	Freshwater	MIPNINVAPNLPLPPQEYDQAYFDILTKVLRLYFVSNDNINQIGMNQVSTNQAL
Ga0007835_10064652	3300003789	Freshwater	MSIPVINVSPNLPQPPQEYSQQYFDILTKVLRLYFVSNDNVNQVGMNQVSTNQTLIWLGV
Ga0007846_10063073	3300003797	Freshwater	NLPLPPAQYSQAYFDALTKVLRLYFASNDNFNQVISNQVSTNQALIWLGV*
Ga0007869_10075253	3300003809	Freshwater	MTIPVINVSPNLPLPPRAYDPVXLDNLTKVLRLYFASNDNVNQVGMXQVSTNQALIWLGL
Ga0007861_10221552	3300003812	Freshwater	MIPNINVSPNLPLPPPQYDQAYLDNLTKVLRLYFTSXDNVNQIGMNQVSTNQALIWLGV*
Ga0007879_10205761	3300003813	Freshwater	VINVAPNLPLPPHQYDQQYIDTLNKVLRLYFASNDNFNQVIANQVASNQAFIWLGL*
Ga0007877_10035881	3300003814	Freshwater	YMTIPVINVSPNLPLPPRAYDPVYLDNLTKVLRLYFASNDNVNQVGMNQVSTNQALIWLGL*
Ga0007856_10017223	3300003815	Freshwater	MTIPVIGVSPNLPLPPKEYDQAYLDNLTKVLRLYFVTNDNINQTGMAQVSSSQALIWLNL
Ga0007829_100481931	3300004095	Freshwater	MSIPIINVSPNLPLPPQTYDQQYFDALTKVLRLYFASNDNVNQVISNQVSTNQALIWLGV
Ga0065168_10020702	3300004684	Freshwater	MIPVINVAPNLPLPPHQYDQQYIDTLNKVLRLYFASNDNFNQVIANQVASNQAFIWLGL*
Ga0065177_10045542	3300004685	Freshwater	MIPNINVSPNLPLPPPQYDQAYLDNLTKVLRLYFTSNDNVNQIGMNQVSTNQALIWLGV*
Ga0065173_10039602	3300004686	Freshwater	MSIPVINVSPNLPLPSQQYDQQYFETLTKVLRLYFASNNNVNQVISNQVSTNQTLIWLGV
Ga0065173_10373493	3300004686	Freshwater	PIINVSPNLPLPPQTYDQQYFDALTKVLRLYFASNDNVNQVISNQVSTNQALIWLGV*
Ga0065176_10098881	3300004691	Freshwater	MSIPVINVSPNLPLPPQQYDQHYFDALTKVLRLYFTSNDNINQVISNQVSTNQALIWLGV
Ga0065170_10109072	3300004694	Freshwater	MSIPVINVAPNLPLPPQQYDQHYFDALTKVLRLYFASNDNVNQVGMNQVSTNQTLIWLGV
Ga0065170_10505261	3300004694	Freshwater	PLPPQQYDQHYLDALTKVLRLYFTSNDNVNQVISNQVSTNQTLIWLGV*
Ga0007809_100878132	3300004807	Freshwater	MSIPVINVSPNLPLPPQQYDQHYFDALTKVLRLYFTSNDNVNQVISNQVSTNQTLIWLGV
Ga0007809_102292552	3300004807	Freshwater	MSIPVINVAPNLPLPPQQYDQHYLDALTKVLRLYFTSNDNVNQVISNQVSTNQTLIWLGV
Ga0007876_10190782	3300006071	Freshwater	MIPIINVAPNLPLPPQQYDQHYFDALTKVLRLYFASNDNFNQVVANQVATNQAFIWLGL*
Ga0007876_10623412	3300006071	Freshwater	MSIPVINVAPNLPQPTLQYNQQYFDILTKVLRLYFASNDNVNQVIANQVSSSQALIWLNL
Ga0007876_10767132	3300006071	Freshwater	MSIPVINVSPNLPLPSQQYDQHYFDTLTKVLRLYFTSNDNVNQVISNQ
Ga0007881_10037483	3300006072	Freshwater	MIPNINVAPNLPLPPQEYDQAYFDILTKVLRLYFVSNDNINQIGMNQVSTNQALIWLGV*
Ga0007813_10216871	3300006103	Freshwater	MIPNINVAPNLPLPPQEYDQAYFDILTKVLRLYFVSNDNINQIGMNQVSTNQSLIWLGV*
Ga0007882_102056941	3300006104	Freshwater	EHMSIPIINVAPNLPLPPAQYSQAYFDALTKVLRLYFASNDNFNQVISNQVSTNQALIWLGV*
Ga0007833_10838291	3300006106	Freshwater	PVINVSPNLPLPPQQYDQHYFDALTKVLRLYFTSNDNINQVISNQVSTNQALIWLGV*
Ga0007871_10529372	3300006110	Freshwater	MSIPIINVAPNLPLPPAQYSQAYFDALTKVLRLYFVSNDNFNQVISNQVSTNQALIWLGV
Ga0007816_10870463	3300006115	Freshwater	MSIPIINVSPNLPLPPQTYDQQYFDALTKVLRLYFASNDNINQVISNQVSTNQALIWLGV
Ga0007866_10531692	3300006119	Freshwater	MIPNINVAPNLPLPPQEYDQAYFDILTKVLRLYFVSNDNINQIGMNQVSTNQALIW
Ga0007824_10093532	3300006121	Freshwater	MIPNINVAPNLPLPPQEYDQAYFDILTKVLRLYFVSNDNINQIGMNQVSTN
Ga0007837_10288611	3300006122	Freshwater	MSIPIINVAPNLPLPPAQYSQAYFDALTKVLRLYFASNDNFNQVISNQVSTNQALI
Ga0007852_10322751	3300006123	Freshwater	MSIPIINVAPNLPLPPQTYDQHYFDALTKVLRLYFASNDNFNQVVSNQVA
Ga0007805_10366871	3300006127	Freshwater	IPVINVAPNLPLPPHQYDQQYIDTLNKVLRLYFASNDNFNQVIANQVASNQAFIWLGL*
Ga0073936_102311551	3300009175	Freshwater Lake Hypolimnion	VLSVSPNLPQPPKEYDQLYFDTLTKVLRLYFVNNDNVNSVGMNQVSASQALIWLNL*
Ga0114951_102120732	3300009502	Freshwater	MSIPTINVSPNLPLPPQQYDQAYFDTLTKVLRLYFVSNDNVNQVGMNQVSASQALIWLNL
Ga0164296_10702413	3300013093	Freshwater	MTIPIQTVSPNLPLPTVQYSQDYFDTLTKVLRLYFKTNDNANAILVNQVSTNQTLIWLNPNL*
Ga0164296_12412893	3300013093	Freshwater	MSIPIINVAPNLPLPPQTYDQHYFDALTKVLRLYFASNDNFNQVVSNQVATNQTLIWLGV
Ga0164296_13750172	3300013093	Freshwater	MSIPVINVAPNLPLPPQQYDQHYFDALTKVLRLYFASNDNVNQIGMNQVSTNQTLIWLGV
Ga0214218_10130831	3300020702	Freshwater	ARKYMTIPVINVSPNLPLPPRAYDPVYLDNLTKVLRLYFASNDNVNQVGMNQVSTNQALIWLGL
Ga0214246_10099632	3300020727	Freshwater	MSIPVLSVSPNLPQPPKEYDQLYFDTLTKVLRLYFVNNDNVNSVGMNQVSANQALIWLNL
Ga0214172_100028826	3300020733	Freshwater	MSIPVINVAPNLPLPSSEYDQHYLDNLTKVLRLYFSSNDNVNQVISNQVSTNQALIWLGV
Ga0214219_10210403	3300020735	Freshwater	NLPLPPPQYDQAYLDNLTKVLRLYFTSNDNVNQIGMNQVSTNQALIWLGV
Ga0214206_10294402	3300021131	Freshwater	MSIPIINVSPNLPLPPQTYDQQYFDVLTKVLRLYFASNDNVNQVISNQVSTNQALIWLGV
Ga0214175_10372122	3300021133	Freshwater	PVINVAPNLPLPPQQYDQAYFDTLTKVLRLYFVSNDNINQIGMNQVSTNQALIWLGV
Ga0214166_10882332	3300021139	Freshwater	MSIPIINVSPNLPLPPKEYDQAYFDTLTKVLRLYFVSNDNVNQIGMNQVSTNQTLIWLGV
Ga0212088_100108566	3300022555	Freshwater Lake Hypolimnion	VSIPVINVSPNLPVPPDKYDQAYFNALTKVLRLYFTNNDNIDQIGMAQVSTNQTLIWLNL
Ga0212088_100329733	3300022555	Freshwater Lake Hypolimnion	MTIPVINVSPNLPLPSKEYDQAYFDTLTKVLRLYFVNNDNVNQIGMNQVSTNQALIWLNL
Ga0212088_101466203	3300022555	Freshwater Lake Hypolimnion	MSIPVINVAPNLPLPPKEYDQAYLDNLTKVLRLYFVSNDNVNQVGMNQVSSSQALIWLNL
Ga0248169_1028726	3300022602	Freshwater	MIPVINVSPNLPQPPMEYDQQYFDILTKVLRLYFASNDNINQVGMNQVSTNQALIWLGV
Ga0248169_1102006	3300022602	Freshwater	MSIPVINVSPNLPLPPKEYDQAYLDNLTKVLRLYFTSNDNVNQIGMNQVSTNQTLIWLGV
Ga0209083_10104601	3300025162	Freshwater	MSIPVLSVSPNLPQPPKEYDQLYFDTLAKVLRLYFVNNDNVNSVGMNQVSASQALIWLNL
Ga0208619_1135992	3300025336	Freshwater	MIPNINVAPNLPLPPQEYDQAYFDILTKVLRLYFVSNDNINQIGMNQVSTNQALIWLGV
Ga0208502_10106153	3300025339	Freshwater	PLPPQQYDQHYFDALTKVLRLYFTSNDNINQVISNQVSTNQALIWLGV
Ga0208502_10203712	3300025339	Freshwater	MSIPVINVSPNLPLPPQQYDQHYFDALTKVLRLYFTSNDNINQVISNQVSTNQ
Ga0208383_10011194	3300025357	Freshwater	MIPNINVSPNLPLPPPQYDQAYLDNLTKVLRLYFTSNDNVNQIGMNQVSTNQALIWLGV
Ga0208382_10143831	3300025369	Freshwater	MSIPVINVSPNLPLPPQQYDQHYFDALTKVLRLYFTSNDNINQVISNQV
Ga0207957_10015324	3300025372	Freshwater	MIPNINVSPNLPLPPPQYNQAYLDNLTKVLRLYFTSNDNVNQIGMNQVSTNQALIWLGV
Ga0208738_10046152	3300025379	Freshwater	MSIPVINVSPNLPLPPQQYDQQYLDTLTKVLRLYFASNDNINQVISNQVSTNQALIWLGV
Ga0208256_10051864	3300025382	Freshwater	INVSPNLPLPPRAYDPVYLDNLTKVLRLYFASNDNVNQVGMNQVSTNQALIWLGL
Ga0208256_10182102	3300025382	Freshwater	MSIPVINVAPNLPLPMAQYDQHYFDSLTKVLRLYFASNDNVNQVIANQVSSNQTLIWLNL
Ga0208250_10067082	3300025383	Freshwater	MIPIINVAPNLPLPPQQYDQHYFDALTKVLRLYFASNDNFNQVVANQVATNQAFIWLGL
Ga0207959_10058013	3300025387	Freshwater	MTIPVINVSPNLPLPPRAYDPVYLDNLTKVLRLYFASNDNVNQVGMNQVSTNQALI
Ga0208257_10472532	3300025389	Freshwater	MSIPVINVAPNLPLPMAQYDQHYFDSLTKVLRLYFASNDNVNQVIANQVSSNQTLIW
Ga0207955_10070333	3300025401	Freshwater	MSIPIINVAPNLPLPPAQYSQAYFDALTKVLRLYFASNDNFNQVISNQVSTNQ
Ga0208378_10292042	3300025407	Freshwater	MIPNINVSPNLPLPPPQYDQAYLDNLTKVLRLYFTSNDNVNQIGMNQVST
Ga0208875_10780831	3300025410	Freshwater	YTKDGYQIXRKKGEHMSIPVINVSPNLPLPPAEYDKQYLENLTKVLRLYFVSNDNVNQIGMNQVSTNQTLIWLGV
Ga0208875_10782342	3300025410	Freshwater	MSIPVINVSPNLPLPSQQYDQQYFETLTKVLRLYFASNDNVNQVISNQVST
Ga0207958_10307563	3300025421	Freshwater	NLPLPPQEYDQAYFDILTKVLRLYFVSNDNINQIGMNQVSTNQALIWLGV
Ga0208500_10116083	3300025429	Freshwater	PLPPQQYDQHYLDALTKVLRLYFTSNDNVNQVISNQVSTNQTLIWLGV
Ga0208389_10436892	3300025470	Freshwater	MSIPVINVSPNLPLPPKQYDQAYIDTLTKVLRLYFASNDNINQVISNQVSTNQALIWLGV
Ga0208741_101670332	3300025723	Freshwater	MIPNINVSPNLPLPPPQYDQAYFDILTKVLRLYFVSNDNINQIGMNQVSTNQSLIWLGV
Ga0208498_10039434	3300025785	Freshwater	EGQHMIPIINVAPNLPLPPQQYDQHYFDALTKVLRLYFASNDNFNQVVANQVATNQAFIWLGL
Ga0209188_10064364	3300027708	Freshwater Lake	MSIPVINVSPNLPLPPQEYDQHYFDILTKVLRLYFTSNDNINQVGMSQVSTSQALIWLNL
Ga0209777_100950582	3300027896	Freshwater Lake Sediment	MIPVINVSPNLPLPPAQYDQQYFDILTKVLRLYFVSNDNVNQVGMNQVSTNQALIWLGV
Ga0209777_101926323	3300027896	Freshwater Lake Sediment	MTIPVINPAPNLPLPPMQYDQFYLDNLTKVLRLYFASNDNVNQVGMNQVSTNQALIWLGV
Ga0209777_105738912	3300027896	Freshwater Lake Sediment	MSIPVINVAPNLPLPPQQYDQHYFDALTKVLRLYFTSNDNVNQVISNQVSTNQALIWLGV
Ga0209777_107647692	3300027896	Freshwater Lake Sediment	MTIPVINVAPNLPLPPKEYDQAYFDILTKVLRLYFTSNDNINQIGMNQVSTSQALIWLNL
Ga0209777_109272501	3300027896	Freshwater Lake Sediment	MSIPVINVAPNLPLPSQTYDQHYFDTLTKVLRLYFASNDNVNQVISNQVSTNQTLIWLGV
Ga0209777_110607811	3300027896	Freshwater Lake Sediment	MSIPIINVAPNLPLPPQTYDQHYFDALTKVLRLYFASNDNFNQVVSNQVSTSQTLIWLGV
Ga0209777_110839482	3300027896	Freshwater Lake Sediment	MSIPVINVAPNLPQPTLQYDQQYFDILTKVLRLYFASNDNVNQVISNQVSSSQALIWLNL
Ga0316219_10902701	3300031759	Freshwater	RKYMTIPVINVSPNLPLPPRAYDPVYLDNLTKVLRLYFASNDNVNQVGMNQVSTNQALIWLGL
Ga0316219_12990441	3300031759	Freshwater	MSIPVINVSPNLPLPPQQYDQHYLDALTKVLRLYFTSNDNVNQVISNQVSTNQTLIWLGV
Ga0316218_10679521	3300032117	Freshwater	MTIPVINVSPNLPLPPRAYDPVYLDNLTKILRLYFASNDNVNQVGMNQVSTNQALIWLGL
Ga0316221_10154102	3300032665	Freshwater	MSIPIINVSPNLPLPPQTYDQQYFDALTKVLRLYFANNDNVNQVISNQVSTNQALIWLGV
Ga0316221_11196572	3300032665	Freshwater	MSIPIINVAPNLPLPPAQYSQAYFDALTKVLRLYFASNDNFNQVISNQV
Ga0316221_12140402	3300032665	Freshwater	MSIPVINVSPNLPLPPQQYDQQYLDTLTKVLRLYFASNDNINQVISNQVSTNQALIWL
Ga0316227_11239292	3300032677	Freshwater	MSIPIINVAPNLPLPPAQYSQAYFDALTKVLRLYFASNDNFNQVISNQVSTNQALIW
Ga0316227_11523571	3300032677	Freshwater	MSIPIINVAPNLPLPSQTYDQHYFDALTKVLRLYFASNDNFNQVVSNQVATNQALIWL
Ga0316227_11928013	3300032677	Freshwater	TIPVINVSPNLPLPPRAYDPVYLDNLTKVLRLYFASNDNVNQVGMNQVSTNQALIWLGL
Ga0316224_10152304	3300032753	Freshwater	VSPNLPLPPAEYDKQYLENLTKVLRLYFVSNDNVNQIGMNQVSTNQTLIWLGV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079517

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences