Metagenome Family F079727

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F079727
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	96 residues
Representative Sequence	MAVNFRSVLPALAWISTLGLAGLVSAQPPAPTADRPHLAKDAKEAMDFLGTWARVTSGEEYFKGATYVGSESCKGSGCHDQQLAEWRTTWHSKILTT
Number of Associated Samples	82
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	93.86 %
% of genes near scaffold ends (potentially truncated)	94.78 %
% of genes from short scaffolds (< 2000 bps)	86.09 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (50.435 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.913 % of family members)
Environment Ontology (ENVO)	Unclassified (61.739 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.130 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 54.40% β-sheet: 0.00% Coil/Unstructured: 45.60%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF07690	MFS_1	6.96
PF03466	LysR_substrate	5.22
PF06568	DUF1127	2.61
PF11379	DUF3182	1.74
PF13435	Cytochrome_C554	1.74
PF03401	TctC	0.87
PF02426	MIase	0.87
PF12679	ABC2_membrane_2	0.87
PF00140	Sigma70_r1_2	0.87
PF00078	RVT_1	0.87
PF00589	Phage_integrase	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG5457	Uncharacterized conserved protein YjiS, DUF1127 family	Function unknown [S]	2.61
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.87
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.87
COG4829	Muconolactone delta-isomerase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.43 %
Unclassified	root	N/A	49.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.43 %
Unclassified	root	N/A	49.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.43 %
Unclassified	root	N/A	49.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	36.52 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.57 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	29.57 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.74 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.57 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	16.52 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	6.09 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.74 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.57 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	7.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.35 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.48 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.74 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	1.74 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.87 %
Alsobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae	0.87 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.87 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.57 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	7.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.35 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.48 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.74 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.74 %
Alsobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter	0.87 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.87 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.87 %
unclassified Desulfobacterales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.57 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	7.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.35 %
Bradyrhizobium icense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	1.74 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.74 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.74 %
Desulfobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	0.87 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.87 %
unclassified Alsobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter → unclassified Alsobacter	0.87 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.87 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.57 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	7.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.35 %
Bradyrhizobium icense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	1.74 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.74 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.74 %
Bradyrhizobium sp. NAS80.1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	0.87 %
Archangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium	0.87 %
Rhizobium freirei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei	0.87 %
Alsobacter sp. SYSU M60028	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter → unclassified Alsobacter → Alsobacter sp. SYSU M60028	0.87 %
Desulfobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.57 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	7.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.35 %
Bradyrhizobium icense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	1.74 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.74 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.74 %
Archangium gephyra	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium → Archangium gephyra	0.87 %
Rhizobium freirei PRF 81	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 81	0.87 %
Bradyrhizobium sp. NAS80.1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	0.87 %
Alsobacter sp. SYSU M60028	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter → unclassified Alsobacter → Alsobacter sp. SYSU M60028	0.87 %
Desulfobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	0.87 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_108738392	Not Available	592	Open in IMG/M
3300004633\|Ga0066395_10127322	All Organisms → cellular organisms → Bacteria → Proteobacteria	1264	Open in IMG/M
3300005187\|Ga0066675_10734581	Not Available	743	Open in IMG/M
3300005332\|Ga0066388_105729861	Not Available	628	Open in IMG/M
3300005332\|Ga0066388_107121312	Not Available	562	Open in IMG/M
3300005440\|Ga0070705_101179728	Not Available	630	Open in IMG/M
3300005445\|Ga0070708_100674036	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300005713\|Ga0066905_100902270	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300005713\|Ga0066905_101048729	Not Available	721	Open in IMG/M
3300005713\|Ga0066905_101474121	Not Available	618	Open in IMG/M
3300005713\|Ga0066905_101987160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	539	Open in IMG/M
3300005764\|Ga0066903_103728255	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300005764\|Ga0066903_104842337	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300005764\|Ga0066903_107999050	Not Available	542	Open in IMG/M
3300006028\|Ga0070717_11120635	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium → Archangium gephyra	716	Open in IMG/M
3300006046\|Ga0066652_101349988	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300006852\|Ga0075433_11264670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	640	Open in IMG/M
3300006854\|Ga0075425_102418178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	583	Open in IMG/M
3300009012\|Ga0066710_102963815	Not Available	663	Open in IMG/M
3300010043\|Ga0126380_10135137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1551	Open in IMG/M
3300010046\|Ga0126384_10532923	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300010046\|Ga0126384_11410773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	650	Open in IMG/M
3300010047\|Ga0126382_10746383	Not Available	827	Open in IMG/M
3300010047\|Ga0126382_11934784	Not Available	559	Open in IMG/M
3300010358\|Ga0126370_10685126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	898	Open in IMG/M
3300010360\|Ga0126372_11273164	Not Available	763	Open in IMG/M
3300010366\|Ga0126379_10147049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	2189	Open in IMG/M
3300010366\|Ga0126379_11384290	Not Available	809	Open in IMG/M
3300010376\|Ga0126381_101253389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1071	Open in IMG/M
3300010398\|Ga0126383_10778796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1039	Open in IMG/M
3300010398\|Ga0126383_11497213	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300012202\|Ga0137363_11416310	Not Available	585	Open in IMG/M
3300012206\|Ga0137380_10067691	Not Available	3266	Open in IMG/M
3300012210\|Ga0137378_10657998	Not Available	958	Open in IMG/M
3300012350\|Ga0137372_10669908	Not Available	754	Open in IMG/M
3300012361\|Ga0137360_11183146	Not Available	661	Open in IMG/M
3300012362\|Ga0137361_11471363	Not Available	603	Open in IMG/M
3300012917\|Ga0137395_10106592	All Organisms → cellular organisms → Bacteria	1869	Open in IMG/M
3300012948\|Ga0126375_11497060	Not Available	577	Open in IMG/M
3300015357\|Ga0134072_10279070	Not Available	614	Open in IMG/M
3300016270\|Ga0182036_11428411	Not Available	580	Open in IMG/M
3300016270\|Ga0182036_11871455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	509	Open in IMG/M
3300016294\|Ga0182041_11723895	Not Available	580	Open in IMG/M
3300016341\|Ga0182035_10657746	Not Available	910	Open in IMG/M
3300016357\|Ga0182032_10241375	All Organisms → cellular organisms → Bacteria → Proteobacteria	1399	Open in IMG/M
3300016357\|Ga0182032_10893247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	755	Open in IMG/M
3300016371\|Ga0182034_10219607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1481	Open in IMG/M
3300016371\|Ga0182034_10680723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	873	Open in IMG/M
3300016371\|Ga0182034_11812305	Not Available	538	Open in IMG/M
3300016387\|Ga0182040_11347421	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300016404\|Ga0182037_11034719	All Organisms → cellular organisms → Bacteria → Proteobacteria	717	Open in IMG/M
3300016422\|Ga0182039_10320690	Not Available	1291	Open in IMG/M
3300016422\|Ga0182039_10550782	Not Available	1002	Open in IMG/M
3300016422\|Ga0182039_10602432	Not Available	960	Open in IMG/M
3300016422\|Ga0182039_12274012	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium	501	Open in IMG/M
3300016445\|Ga0182038_11292042	Not Available	652	Open in IMG/M
3300027655\|Ga0209388_1101618	Not Available	825	Open in IMG/M
3300027671\|Ga0209588_1212736	Not Available	599	Open in IMG/M
3300027846\|Ga0209180_10042428	All Organisms → cellular organisms → Bacteria	2489	Open in IMG/M
3300028819\|Ga0307296_10544684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	635	Open in IMG/M
3300031545\|Ga0318541_10027720	All Organisms → cellular organisms → Bacteria	2779	Open in IMG/M
3300031561\|Ga0318528_10145631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1260	Open in IMG/M
3300031573\|Ga0310915_10295421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1144	Open in IMG/M
3300031640\|Ga0318555_10721817	Not Available	538	Open in IMG/M
3300031713\|Ga0318496_10465279	Not Available	699	Open in IMG/M
3300031719\|Ga0306917_10084159	Not Available	2242	Open in IMG/M
3300031744\|Ga0306918_10192904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1531	Open in IMG/M
3300031744\|Ga0306918_10516577	Not Available	935	Open in IMG/M
3300031747\|Ga0318502_10615122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	654	Open in IMG/M
3300031751\|Ga0318494_10555974	Not Available	670	Open in IMG/M
3300031763\|Ga0318537_10017487	Not Available	2476	Open in IMG/M
3300031770\|Ga0318521_10093986	Not Available	1639	Open in IMG/M
3300031778\|Ga0318498_10101642	All Organisms → cellular organisms → Bacteria	1303	Open in IMG/M
3300031792\|Ga0318529_10075793	Not Available	1490	Open in IMG/M
3300031793\|Ga0318548_10648505	Not Available	513	Open in IMG/M
3300031797\|Ga0318550_10023337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2593	Open in IMG/M
3300031832\|Ga0318499_10059766	All Organisms → cellular organisms → Bacteria	1436	Open in IMG/M
3300031860\|Ga0318495_10068286	Not Available	1583	Open in IMG/M
3300031890\|Ga0306925_10338350	Not Available	1617	Open in IMG/M
3300031893\|Ga0318536_10080415	Not Available	1615	Open in IMG/M
3300031897\|Ga0318520_10052054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2156	Open in IMG/M
3300031910\|Ga0306923_10086892	All Organisms → cellular organisms → Bacteria → Proteobacteria	3513	Open in IMG/M
3300031910\|Ga0306923_10668340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1159	Open in IMG/M
3300031912\|Ga0306921_10012438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter → unclassified Alsobacter → Alsobacter sp. SYSU M60028	9126	Open in IMG/M
3300031912\|Ga0306921_10452014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1496	Open in IMG/M
3300031912\|Ga0306921_10708589	All Organisms → cellular organisms → Bacteria → Proteobacteria	1156	Open in IMG/M
3300031912\|Ga0306921_10952018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	971	Open in IMG/M
3300031941\|Ga0310912_10165346	Not Available	1677	Open in IMG/M
3300031941\|Ga0310912_10434943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1022	Open in IMG/M
3300031942\|Ga0310916_10265537	Not Available	1448	Open in IMG/M
3300031954\|Ga0306926_10934345	Not Available	1036	Open in IMG/M
3300031954\|Ga0306926_12245519	Not Available	606	Open in IMG/M
3300031959\|Ga0318530_10004213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4226	Open in IMG/M
3300032001\|Ga0306922_10337333	Not Available	1617	Open in IMG/M
3300032001\|Ga0306922_10719457	All Organisms → cellular organisms → Bacteria → Proteobacteria	1049	Open in IMG/M
3300032001\|Ga0306922_11134448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	799	Open in IMG/M
3300032025\|Ga0318507_10109477	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1158	Open in IMG/M
3300032035\|Ga0310911_10246077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1023	Open in IMG/M
3300032039\|Ga0318559_10112453	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1215	Open in IMG/M
3300032043\|Ga0318556_10125216	Not Available	1316	Open in IMG/M
3300032044\|Ga0318558_10070941	Not Available	1584	Open in IMG/M
3300032051\|Ga0318532_10013034	All Organisms → cellular organisms → Bacteria	2589	Open in IMG/M
3300032055\|Ga0318575_10270576	Not Available	858	Open in IMG/M
3300032059\|Ga0318533_10081806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2204	Open in IMG/M
3300032076\|Ga0306924_10341528	Not Available	1717	Open in IMG/M
3300032076\|Ga0306924_12416379	Not Available	529	Open in IMG/M
3300032261\|Ga0306920_100330260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 81	2270	Open in IMG/M
3300032261\|Ga0306920_100439900	Not Available	1937	Open in IMG/M
3300032261\|Ga0306920_100563465	Not Available	1687	Open in IMG/M
3300032261\|Ga0306920_101864583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	846	Open in IMG/M
3300032261\|Ga0306920_102476499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	714	Open in IMG/M
3300032261\|Ga0306920_103514105	Not Available	579	Open in IMG/M
3300033289\|Ga0310914_10388929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1262	Open in IMG/M
3300033290\|Ga0318519_10015146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	3308	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.26%
Host-Associated	Host-Associated	1.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.26%
Plants	Host-Associated → Plants	1.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	86.96%
Loam	Environmental → Terrestrial → Soil → Loam	11.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.74%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	61.74%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.70%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.30%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.61%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.87%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1087383921	3300000955	Soil	MAVNFRSVLPALACISMLGLAGLVSAQPPAPTADRPHLAKDAKEAMDFLATWARVTSGEEYFKSATYVGSESCKGSGCHDQQLAEWRLTWHSKIL
Ga0066395_101273222	3300004633	Tropical Forest Soil	MVVNFRSVAPALVWISTVGLAGLVSAQPPAPTADRPHLAKDAKEAMDFLGTWARITSGEEYFKGATYVGSEGCRGSGCHDKQLEEWRTTWHSKILTT
Ga0066675_107345811	3300005187	Soil	MAVNFRSFVAALACISMLGLVGLVSAQAPAPTADRPHLAKDTKEAMDFLATWARVTSGEEYFKGATYVGSEGCKGSGCHDQQIQEWRT
Ga0066388_1057298611	3300005332	Tropical Forest Soil	MAVNFRSVVPVLACISMLGLAGLVSAQPPAPTAGRPHLAKDAKEAMDFLATWARVTSGEEYFKGATYVGSESCKGSGCHDQQL
Ga0066388_1071213121	3300005332	Tropical Forest Soil	MAVNFRSVVPVLACISMLGVAGLVSAQPPAPTADRPHLAKDAKEAMDFLATWARVTSGEEYFKGATYVGSESCKGSGCHDQQLAEWRTTWHSKILTPP
Ga0070705_1011797281	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MVVNFRSVGPVLAWISTVGLAGLVSAQPPAPTSDRPHLAKDAKEAMDFLGTWARIMSGEEYFKGATYVGSDGCKGSGCHDQQIREWRTTWHSKILTTPSAETVKGDFNNA
Ga0070708_1006740361	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAVNFRSFVPALICISIGLAGLVSAQPPAPPADRPHLAKDAKEAMDFLATWVRVTSGEEFFKGATYVGSESCKGSGCHDQQIQEW
Ga0066905_1009022701	3300005713	Tropical Forest Soil	MAVNFRSVICFLACISMLGLAGRVSAQPPAPTTDRPHLAKDAKEAMDFLATWARVTSGEEHFKGATYVGSESCKGSGCHDQQLAEWRTTWHSKILTLPST
Ga0066905_1010487292	3300005713	Tropical Forest Soil	MAVNFRSVLPALAWISTLGLAGLVSAQPPAPTADRPHLAKDAKEAMDFLATWARVTSGEEFFKGATYVGSESCKGSGCHDQQLAEWRTTWHSKILTPPSA
Ga0066905_1014741212	3300005713	Tropical Forest Soil	MAVNFRSVVPVLACISMLGLAGLVSAQPPAPTADRPHLAKDAKEAMDFLATWARVTSGEEYFKGATYVGSESCKGSGCHDQQLAEWRTTWHSKI
Ga0066905_1019871602	3300005713	Tropical Forest Soil	MAVNFRSVVSFLACISMLGLAGLVSAQPPAPTADRPHLAKDAKEAMDFLATWARVTSGEEYFKGATYVGSESCKGSGCHDQQ
Ga0066903_1037282551	3300005764	Tropical Forest Soil	MAVNFRSVVSFLACISMLGLGGLVSAQPPSPTADRPHLAKDAKEAMDFLATWARVTSGEEYFKGATYVGSESCKGSGCHDQQ
Ga0066903_1048423371	3300005764	Tropical Forest Soil	VAVNFRSVISFLACISMLGLAGLVSAQPPSPPADRPHLAKDAKEAMDFLATWARVTSGEEFFKGATYVGSESCKGSGCHDQQLAEWRTTWHS
Ga0066903_1079990502	3300005764	Tropical Forest Soil	MAVNFRSVVPALACISMLGVAGLLSAQPPAPTTDRPHLAKDAKEAMDFLGTWARVTSGEEYFKGATYVGSESCKGSGCHDQQIQEW
Ga0070717_111206351	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MVVNFRSVAPVLACISMLGLAGLVSAQPPAPTADRPHLAKDAKEAMDFLATWARVTSGEEYFKGATYVGSEGCKGSGCHDQQIQEWRTTWHSKILTVPSAETVKGDFNNAIIPFQNVRAVAK
Ga0066652_1013499881	3300006046	Soil	MAVNFRSVLPALACISTLGLAAIVSAEAPAPTANRPFLARDAKEAMDFLDTWARITSGEEYFKGATYVGSEGCKGSGCHDQQIQEWRTTWHSKILTTPSA
Ga0075433_112646702	3300006852	Populus Rhizosphere	MAVNFRSVLPALACISTLGLAALVSAQAPAPTADRPHLAKDAKEAMDFLATWVRVTSGEEYFKGATYVGSEGCKGSGCHDQQIQEWRTTWHSKILTLPSAETVKGNF
Ga0075425_1024181782	3300006854	Populus Rhizosphere	MAVNFRSVLPALACISTLGLAALVSAQAPAPTADRPHLAKDAKEAMDFLATWVRVTSGEEYFKGATYVGSEGCKGSGCHDQQL
Ga0066710_1029638151	3300009012	Grasslands Soil	MVVNFRSVAPALAWISTVGLAGLVSAQPPAPTADRPHLAKDAKEAMDFLATWARVTSGEEYFKGATYVGSEGCKGSGCHD
Ga0126380_101351373	3300010043	Tropical Forest Soil	MVVNFRSIAPALAWLSTLGLAALVSAQPPAPTADRPHLAKDAKEAMDFLGTWARVTSGEEYFKGATYVGSESCKGGGCHDQQLAEWRTTW
Ga0126384_105329232	3300010046	Tropical Forest Soil	MLGLAGLVSAQPPAPTADRPHLAKDAKEAMDFLATWARVTSGEEFFKGATYVGSESCKGSGCHDQQLAEWRTTWHSKILT
Ga0126384_114107731	3300010046	Tropical Forest Soil	MAVNFRSVLPALAWISTLGLATLVSAQPPAPTADRPHLAKDAKEAMDFLATWARVTSGEEYFKGATYVGSESCKGSGCHDQQLAEWRTTWHSKILT
Ga0126382_107463832	3300010047	Tropical Forest Soil	MAVNFRSVVPVLACISMLGLAGLVSAQPPTSVADRPHLAKDAKEAMDFLATWARVTSGEEYFKGATYVGSESCKGSGCHDQQLAEWRTTWHSKILT
Ga0126382_119347841	3300010047	Tropical Forest Soil	MVVNFHSVAPVLAWISTVGLAGLVSAQAPAPTADRPHLAKDAKEAMDFLGTWARVTSGEEYFKGATYVGSESCKGSG
Ga0126370_106851262	3300010358	Tropical Forest Soil	MAVNFRSVLPALAWISTLGLAGLVSAQPPTADRPHLAKDAKEAMDFLGTWARVTSGEEYFKGATYVGSESCNGSGC
Ga0126372_112731642	3300010360	Tropical Forest Soil	MAVNFRSVLPALAWISTFGLAGLVSAQPPAPTADRPHLAKDAKEAMDFLGTWARVASGEEYFKGATYVGSESCKGSGCHDQQVEEWRTTWHSKILTTPSVETVKGDFNNAVIPFQN
Ga0126379_101470491	3300010366	Tropical Forest Soil	MAVNFRSVVPVLVCSSMLGLAGLVSAQPPTSVADRPHLAKDAKEAMDFLATWARVSSGEEYFKDATYVGSEGCKGSGCHDKQIEEWRTTWHSKI
Ga0126379_113842901	3300010366	Tropical Forest Soil	MAVNFRSVLPTLAWISTLGLAGLVSAQPPAPTADRPHLAKDAKEAMDFLGTWARVTSGEEYFNGATYVGSESCKGSGCHDQQIEEWRTT
Ga0126381_1012533891	3300010376	Tropical Forest Soil	MVVNFRSVAPVLAWISTVGLAGLVSAQAPAPTADRPHLAKDAKEAMDFLATWARVTSGEEYFKGATYVGSEGCKGSGCHDQQIQEWRTTWHSKILT
Ga0126383_107787962	3300010398	Tropical Forest Soil	MLGLAGLVSAQAPAPTADRPHLAKDAKEAMDFLATWARVTSGEEYFKGATYVGSESCKGSGCHDQQIQEWRVTWHSKILTPPSAETVTGNFNNAVIPFQNVRAVAKGH
Ga0126383_114972131	3300010398	Tropical Forest Soil	MVVNLRSVAPALAWISTLGLAGLVLAQPPAPTGDRPHLAKDAKEAMDFLATWSRVTSGEEYFKGATYVGSESCKGSGCHDQQIQEWRTTWHSKI
Ga0137363_114163101	3300012202	Vadose Zone Soil	MAVNFRSFVPALICISIGLAGLVSAQPPAPPADRPHLAKDAKEAMDFLATWVRVTSGEEYFKGATYVGSEGCRGSGCHDKQIEEWRTTWHSKILTTP
Ga0137380_100676911	3300012206	Vadose Zone Soil	MAVNFRSVVSFLACISMLGVVGLVSAQAPAPTADRPHLAKDAKEAMDFLATWVRVTSGEEYFKGATYVGSEGCKGSGCHDQQIQE
Ga0137378_106579981	3300012210	Vadose Zone Soil	MVVNFRSVAPALAWISTVGLAGLVSAQPPAPTADRPHLAKDAKEAMDFLATWVRGTSGEEYFKGATYVGSEGCKGSGCHDQQIREWRTT
Ga0137372_106699081	3300012350	Vadose Zone Soil	MVVNFRSVAPALAWISTVGLAGLVSAQPPAPTADRPHLAKDAKEAMDFLATWVRVTSGEEYFKGATYVGNEGCKGSGCHDQQIQE
Ga0137360_111831461	3300012361	Vadose Zone Soil	MVVNFRSVGPVLAWISTVGLAGLVSAQPPAPTSDRPHLAKDAKEAMDFLATWARITSGEDYFKGATYVGSEGCKGSGCHDQQIQEWRTTWHSKILTLPSTETVTGNF
Ga0137361_114713631	3300012362	Vadose Zone Soil	MVLSAGSQAMVVNFRSVAPALAWISTLGLAGLVSAQPPAPTADRPHLAKDAKEAMDFLATWVRVTSGEEYFKGATYVGSEGCRGSGCHDKQIEEWRTTWHSKILTTPSVETVKGDFNNAVIPFQNIRAVAKG
Ga0137395_101065923	3300012917	Vadose Zone Soil	MAGSSAMAVNFRSVLPALTGISTLGLAALVSAQAPAPTADRPHLAKDAKEAMDFLATWVRVTSGEEYFKGATYVGSEGCKGSGCHDQQIQEWRTTWHSKILTTPSAETVKGDF
Ga0126375_114970601	3300012948	Tropical Forest Soil	MAVNYRSVVLFLACISMLGAAGLVSAQPPATADRPHLAKDAKEAMDFLATWVRVTSGEEYFKGATYVGSESCRGSGCHDQQIQEWRTTWHSKILRVPS
Ga0134072_102790701	3300015357	Grasslands Soil	MILKLRSFGLLFACTTGLAVAGVVSAQPPAPTADRPHLAKDAKQAMDFLATWARITSSEEYFKDATYVGSEGCKGSGCHDQQVQEWRTTWHSKIL
Ga0182036_114284111	3300016270	Soil	MVVNFHSVAPVLAWISTVSLAGLVSAQAPAPTADRPHLAKDAKEAMDFLATWARVTSGEEHFKGATYVGSESCKGSGCHDQQLAEWRTTWHSKILTLPSTETVTGNFNN
Ga0182036_118714552	3300016270	Soil	MAVNFRSVLPALAWISTLGLAGLVSAQPPAPTADRPHLAKDAKEAMDFLGTWARVTSGEEYFKGATYVGSEGCRGSGCHDQQLAEWRTTWHSKIL
Ga0182041_117238951	3300016294	Soil	MVVNFRSVAPALVWISTVGLAGLVSAQQPAPTADRPHLAKDAKEAMDFLGTWARITSGEEYFKGATYVGSESCRGSGCHDQQIQEWRTTWHSKILRVPSAETVTGDFNNAVIP
Ga0182035_106577461	3300016341	Soil	MAVNFRSVVPVLACISMLGVAGLVSAQPPAPTADRPHLAKDAKEAMDFLATWARVTSGEEFFKGATYVGSESCKGSGCHDQQLAEWRTTWHSK
Ga0182032_102413752	3300016357	Soil	MVVNFRSVAPALVWISTVGLAGLVSAQQPAPTADRPHLAKDAKEAMDFLGTWARITSGEEYFKGATYVGSEGCKGSGCHDQQIQE
Ga0182032_108932472	3300016357	Soil	MAVNFRSVLPALACILTLGLAGLVSAQPPAPTTDRPHLAKDAREAMDFLATWARVTSGEEHFKGATYVGSESCKGSGCHDQQ
Ga0182034_102196072	3300016371	Soil	MAVNFRSVLPALAWISTLGLASLVSAQPPAPTADRPHLAKDAKEAMDFLGTWARVTSGEDYFKGATYVGSDGCKGSGCHDQQLSEWRTTWHSKILTTPSAETVK
Ga0182034_106807231	3300016371	Soil	MAVNFRSVLPALACILTLGLAGLVSAQPPAPTTDRPHLAKDAREAMDFLATWARVTSGEEHFKGATYVGSESCKGSGCHDQQL
Ga0182034_118123051	3300016371	Soil	MAVNFRSVVPVLACISILGLAGLVSAQPPAPTADRPHLAKDAKEAMDFLATWARVTSGEEFFKGATYVGSESCKGSGCHDQQLAEWRT
Ga0182040_113474211	3300016387	Soil	MVVNLRSVAPALAWISTLGLAGLVSAQPPAPTADRPHLAKDAKEAMDFLATWARVTSGEEYFKGATYVGSEGCKGSGCHDQQLAEWRTT
Ga0182037_110347191	3300016404	Soil	MAVNFRSVLPALAWISTLGLAGLVSAQPPTADRPHLAKDAKEAMDFLGTWARVTSGEEYFKGATYVGSESCKGSGCHDKQLEEWRTTWHSKILTTPSVETVKGDFN
Ga0182039_103206902	3300016422	Soil	MVVNFHSVAPVLAWISTVSLAGLVSAQAPAPTADRPHLAKDAKEAMDFLATWARVTSGEEHFKGATYVGSESCKGSGCHDQQL
Ga0182039_105507821	3300016422	Soil	MAVNFRSVVPVLACISILGLAGLVSAQPPAPTADRPHLAKDAKEAMDFLATWARVTSGEEFFKGATYVGSESCKGSGCHDQQLAEWRNDLAFENPHAAFR
Ga0182039_106024322	3300016422	Soil	MAVNFRSVVPVLAWIAMMGVAGLVSAQPPAPTADRPHLAKDAKEAMDFLATWARVTSGEEYFKGATYVGSESCKGSGCHDQQLA
Ga0182039_122740121	3300016422	Soil	MVIESRAFVLAIACISALGLAGLASAQPAAPTNNRPYLAKDAKEAMDFLGTWLRITSGEDYFKGATYVGSEGCKGCHDQQLAEWRTTWHSKILTT
Ga0182038_112920422	3300016445	Soil	MAVNFRSVISFLACTSMLGLGGLVSAQPPAPTADRPHLAKDAKEAMDFLATWARVTSGEEFFKGATYVGSESCKGSGCHDQQLAEWRTTWHSKILTPPSAETVKGDFN
Ga0209388_11016182	3300027655	Vadose Zone Soil	MAVNFRSVLPALTGISTLGLAALVSAQAPAPTADRPHLAKDAKEAMDFLATWVRVTSGEEYFKGATYVGSEGCKGSGCHDQQIQEWRTTWHSKILT
Ga0209588_12127361	3300027671	Vadose Zone Soil	MAVNFRSVLPALACISTLGLAAIVSAEAPAPTANRPFLARDAKEAMDFLDTWARITSGEEYFKGATYVGSEGCKGSGCHDQQIQEWRTTWHSKILTT
Ga0209180_100424283	3300027846	Vadose Zone Soil	MAVNFRSVLPALTGISTLGLAALVSAQAPAPTADRPHLAKDAKEAMDFLATWVRVTSGEEYFKGATYVGSEGCKGSGCHDQQIQEWRT
Ga0307296_105446841	3300028819	Soil	MAVNFRSFVPALACISMLGLAGLVSAQPPAPTADRPHLAMDAKEAMDFLATWARITSGEEYFKGATYVGSEGCKGSGCHDKQLEEWRTTWHSKILTPPSAETVKGDFNNAVIPFQNIRAVAKG
Ga0318541_100277201	3300031545	Soil	MAVNFRSVLPALAWISTLGLASLVSAQPPAPTADRPHLAKDAKEAMDFLGTWARVTSGEDYFKGATYVGSDGCKGSGCHDQQLSEWRTTWHSKILTTPSAE
Ga0318528_101456312	3300031561	Soil	MAVNFRSVLPALAWISTLGLASLVSAQPPASTADRPHLAKDAKEAMDFLGTWARVSSGEEYFKGATYVGSESCKGSGCHDQQLAEWRTTWHSKILTTPSAETVKGDFNNA
Ga0310915_102954211	3300031573	Soil	MAVNFRSVLPALAWISTLGLAGLVSAQPPTADRPHLAKDAKEAMDFLGTWARVTSGEEYFKGATYVGSESCKGSGCHDKQLEEWRTTWHSKILTTPSVETVKGDFNNAVIPFQ
Ga0318555_107218171	3300031640	Soil	MVVNFHSVAPVLAWISTVSLAGLVSAQAPAPTADRPHLAKDAKEAMDFLATWARVTSGEEHFKGATYVGSESCKGSGCHDQQLAEWRTTWHSKILTLPST
Ga0318496_104652791	3300031713	Soil	MAVNFRSVVPVLAWIAMMGVAGLVSAQPPAPTADRPHLAKDAKEAMDFLATWARVTSGEEYFKGATYVGSESCKGSGCHDQQLAEWRTTWHSKILTPPSV
Ga0306917_100841593	3300031719	Soil	MAVNFRSVVPVLAWIAMMGVAGLVSAQPPAPTADRPHLAKDAKEAMDFLATWARVTSGEEYFKGATYVGSESCKGSGCHD
Ga0306918_101929042	3300031744	Soil	MAVNFRSVLPALAWISTLGLASLVSAQPPAPTADRPHLAKDAKEAMDFLGTWARVTSGEEYFKGATYVGSESCKGSGCHDQQLSEWRTTWHSKILTTPSAETV
Ga0306918_105165772	3300031744	Soil	MAVNFRSVVPVLACISMLGVAGLVSAQPPAPTADRPHLAKDAKEAMDFLATWARVTSGEEYFKGATYVGSESCKGSGCHD
Ga0318502_106151221	3300031747	Soil	MAVNFRSVLPALAWISTLGLAGLVSAQPPAPTADRPHLAKDAKEAMDFLGTWARVTSGEEYFKGATYVGSESCKGSGCHDQQLAEWRTTWHSKILTTPS
Ga0318494_105559741	3300031751	Soil	MVVSDGSQAVVVNFRSVAPALAWIATVVLAGLVSAQPPAPTADRPHLAKDAKEAMDFLGTWARVTSGEEYFKGATYVGSESCKGSGCHDQQIQEWRTTWHSKILRVPSAETVTGDFNNAVIPFQNIR
Ga0318537_100174871	3300031763	Soil	MAVNFRSVVPVLACISILGLAGLVSAQPPAPTADRPHLAKDAKEAMDFLATWARVTSGEEFFKGATYVGSEGCKGSGCHDQQLAEWR
Ga0318521_100939864	3300031770	Soil	MAVNFRSVVPVLACISILGLAGLVSAQPPAPTADRPHLAKDAKEAMDFLATWARVTSGEEFFKGATYVGSEGCKGSGCHDQ
Ga0318498_101016422	3300031778	Soil	MAVNFRSVLPALAWISTLGLAGLVSAQPPAPTADRPHLAKDAKEAMDFLGTWARVTSGEEYFKGATYVGSESCKGSGCHDQQLAEWRTTWHSKILTT
Ga0318529_100757931	3300031792	Soil	MAVNFRSVVPVLAWIAMMGVAGLVSAQPPAPTADRPHLAKDAKEAMDFLATWARVTSGEEYFKGATYVGSESCKGSGCHDQQLAEWRTT
Ga0318548_106485051	3300031793	Soil	MAVNFRSVLPALAWISTLGLASLVSAQPPAPTADRPHLAKDAKEAMDFLGTWARVTSGEDYFKGATYVGSDGCKGSGCHDQQLSEWRTTWHSKI
Ga0318550_100233371	3300031797	Soil	MAVNFRSVLPALAWISTLGLAGLVSAQPPAPTADRPHLAKDAKEAMDFLGTWARVTSGEEYFKGATYVGSESCKGSGCHDQQLAEWRTTWHSKILTTPSVET
Ga0318499_100597662	3300031832	Soil	MAVNFRSVLPALAWISTLGLAGLVSAQPPAPTADRPHLAKDAKEAMDFLGTWARVTSGEEYFKGATYVGSESCKGSGCHDQ
Ga0318495_100682861	3300031860	Soil	MAVNFRSVVPVLAWIAMMGVAGLVSAQPPAPTADRPHLAKDAKEAMDFLATWARVTSGEEYFKGATYVGSESCKGSGCHDQQLAEWRTTWHSKILTPPSVET
Ga0306925_103383503	3300031890	Soil	MVVNFHSVAPVLAWISTVSLAGLVSAQAPAPTADRPHLAKDAKEAMDFLATWARVTSGEEHFKGATYVGSESCKGSGCHDQQLAEWRTTWHSK
Ga0318536_100804152	3300031893	Soil	MAVNFRSVVPVLASIAMMGVAGLVSAQPPAPTADRPHLAKDAKEAMDFLATWARVTSGEEYFKGATYVGSESCKGSGCHDQQLAEWRTTWHSKILTPPSA
Ga0318536_103717171	3300031893	Soil	MVVSDGSQAVVVNFRSVAPALAWIATVVLAGLVSAQPPAPTADRPHLAKDAKEAMDFLGTWARVTSGEEYFKGATYVGSESCKGSGCHDQQIQEWRTTWHSKILRVPSAETVTGDFNNAVIPFQNIRAVAKGHD
Ga0318520_100520541	3300031897	Soil	MAVNFRSVLPALAWISTLGLASLVSAQPPAPTADRPHLAKDAKEAMDFLGTWARVTSGEEYFKGATYVGSESCKGSGCHDQQLSEWRTT
Ga0306923_100868921	3300031910	Soil	MVVNFHSVAPVLAWISTVSLAGLVSAQAPAPTADRPHLAKDAKEAMDFLATWARVTSGEEHFKGATYVGSESCKGSGCHDQQLAE
Ga0306923_106683401	3300031910	Soil	MAVNFRSVLPALACILTLGLAGLVSAQPPAPTTDRPHLAKDAREAMDFLATWARVTSGEEHFKGATYVGSESCKGSGCHDQQLAE
Ga0306921_100124382	3300031912	Soil	MAVNFRSVVPVLACISMLGVAGLVSAQPPAPTADRPHLAKDAKEAMDFLATWARVTSGEEFFKGATYVGSESCKGSGCHDQQLAEWRNDLAFENPHAAFR
Ga0306921_104520143	3300031912	Soil	MAVNFRSVLPALACILTLGLAGLVSAQPPAPTTDRPHLAKDAREAMDFLATWARVTSGEEHFKGATYVGSESCKGSGCHDQQLAEWRTTWHSKILTLPSTETVTGNFNNAVIPFQNVR
Ga0306921_107085891	3300031912	Soil	MVVNFRSVAPALVWISTVGLAGLVSAQQPAPTADRPHLAKDAKEAMDFLGTWARITSGEDNFKGATYVGSEGCKGSGCHDQQIQE
Ga0306921_109520182	3300031912	Soil	MAVNFRSVLPALAWISTLGLAGLVSAQPPAPTADRPHLAKDAKEAMDFLGTWARVTSGEEYFKGATYVGSESCKGSGCHD
Ga0310912_101653461	3300031941	Soil	MVVNFHSVAPVLAWISTVSLAGLVSAQAPAPTADRPHLAKDAKEAMDFLATWARVTSGEEHFKGATYVGSESCKGSGCHDQ
Ga0310912_104349431	3300031941	Soil	MAVNFRSVLPALAWISTLGLAGLVSAQPPTADRPHLAKDAKEAMDFLGTWARVTSGEEYFKGATYVGSESCKGSGCHDKQLEEWRT
Ga0310916_102655372	3300031942	Soil	MAVNFRSVVPVLAWIAMMGVAGLVSAQPPAPTADRPHLAKDAKEAMDFLATWARVTSGEEYFKGATYVGSESCKGSGCHDQQLAEWRTTWHSKILTPPS
Ga0306926_109343453	3300031954	Soil	MVVNFRSVAPALVWISTVGLAGLVSAQPPAPTADRPHLAKDAKEAMDFLGTWARITSGEEYFKGATYVGSEGCKGSGCHDQQIQEWRTTWHSKILTPPSVETVK
Ga0306926_122455192	3300031954	Soil	MVVNFRSVAPALAWISTLGLAGLVLAQPPAPPTDRPHLAKDAKEAMDFLGTWARVTSGEEYFKGATYVGSEGCKGSGCHDKQIEEWRTTWHSKILTPPSAETVKGDFNNAVIPF
Ga0318530_100042135	3300031959	Soil	MAVNFRSVPPALAWISTLGLAGLVSAQPPAPTADRPHLAKDAKEAMDFLGTWARVTSGEEYFKGATYVGSEGCRGSGCHDQQLAEWRTTWHSKILTTPSAETVKGDFNNAVIPFQNIRAVAKGH
Ga0306922_103373331	3300032001	Soil	MVVNFHSVAPVLAWISTVSLAGLVSAQAPAPTADRPHLAKDAKEAMDFLATWARVTSGEEHFKGATYVGSESCKGSGCHDQQLAEWRTTWHSKILT
Ga0306922_107194571	3300032001	Soil	RSVAPALVWISTVGLAGLVSAQPPAPTADRPHLAKDAKEAMDFLGTWARITSGEDNFKGATYVGSEGCKGSGCHDQQIQE
Ga0306922_111344482	3300032001	Soil	VAVNFRSVLPALAWISTLGLASLVSAQPPASTADRPHLAKDAKEAMDFLGTWARVSSGEEYFKGATYVGSESCKGSGCHD
Ga0318507_101094772	3300032025	Soil	MAVNFRSVVPVLAWIAMMGVAGLVSAQPPAPTADRPHLAKDAKEAMDFLATWARVTSGEEYFKGATYVGSESCKGSGCHDQQLAEWRTTWHSKILTPPSVETVK
Ga0310911_102460771	3300032035	Soil	MAVNFRSVISFLACTSMLGLGGLVSAQPPAPTADRPHLAKDAKEAMDFLATWARVTSGEEFFKGATYVGSESCKGSGCHDQQLAEWRTTWHSKILTPPS
Ga0318559_101124531	3300032039	Soil	MAVNFRSVVPVLAWIAMMGVAGLVSAQPPAPTADRPHLAKDAKEAMDFLATWARVTSGEEYFKGATYVGSESCKGSGCHDQQLAEWRTTWHSKILTTPSVETVKGD
Ga0318556_101252161	3300032043	Soil	MAVNFRSVVPVLACISILGLAGLVSAQPPAPTADRPHLAKDAKEAMDFLATWARVTSGEEYFKGATYVGSESCKGSGCHDQQLA
Ga0318558_100709412	3300032044	Soil	MAVNFRSVVPVLAWIAMMGVAGLVSAQPPAPTADRPHLAKDAKEAMDFLATWARVTSGEEYFKGATYVGSESCKGSGCHDQQLAEWRTTWHSKILTTPSVE
Ga0318532_100130343	3300032051	Soil	MAVNFRSVISFLACTSMLGLGGLVSAQPPAPTADRPHLAKDAKEAMDFLATWARVTSGEEFFKGATYVGSESCKGSGCHDQQLAEWRTT
Ga0318575_102705761	3300032055	Soil	MAVNFRSVVPVLAWIAMMGVAGLVSAQPPAPTADRPHLAKDAKEAMDFLATWARVTSGEEFFKGATYVGSEGCKGSGCHDQQLAEWRTTWHSKILTPPSAETVK
Ga0318533_100818061	3300032059	Soil	MAVNFRSVLPALAWISTLGLASLVSAQPPAPTADRPHLAKDAKEAMDFLGTWARVTSGEEYFKGATYVGSESCKGSGCHDQQLSEWRTTWHSKILTTPSAETVKGDFNN
Ga0306924_103415281	3300032076	Soil	MAVNFRSVVPVLACISMLGVAGLVSAQPPAPTADRPHLAKDAKEAMDFLATWARVTSGEEFFKGATYVGSESCKGSGCHDQQLAEWRNDL
Ga0306924_124163792	3300032076	Soil	MLGLAGLVLAQPPAPTADRLHLAKDAKEAMDFLGTWARVTSGEEYFKGATYVGSEGCRGSGCHDQQLAEWRTTWHSKILTT
Ga0306920_1003302601	3300032261	Soil	MVVNFHSVAPVLAWISTVSLAGLVSAQAPAPTADRPHLAKDAKEAMDFLATWARVTSGEEHFKGATYVGSESCKGSGCHDQQLAEWRTTWHSKILTLPSTETVTGN
Ga0306920_1004399004	3300032261	Soil	MVVNFRSVAPALVWISTVGLAGLVSAQPPAPTADRPHLAKDAKEAMDFLGTWARITSGEDNFKGATYVGSEGCKGSGCHDQQIQEWRTTWHSKILTPPSVET
Ga0306920_1005634651	3300032261	Soil	MAVNFRSVVPVLACISMLGVAGLVSAQPPAPTADRPHLAKDAKEAMDFLATWARVTSGEEFFKGATYVGSESCKGSGCHDQQLAEWRTTWHSKILTPPSVETVKGDF
Ga0306920_1018645832	3300032261	Soil	VAVNFRSVLPALAWISTLGLASLVSAQPPASTADRPHLAKDAKEAMDFLGTWARVSSGEEYFKGATYVGSESCKGSGCHDQQLAEWRTTWHSK
Ga0306920_1024764992	3300032261	Soil	MAVNFRSVLPALACILTLGLAGLVSAQPPAPTTDRPHLAKDAREAMDFLATWARVTSGEEHFKGATYVGSESCKGSGCHD
Ga0306920_1035141051	3300032261	Soil	MVVNLRSVAPALAWISTLGLAGLVSAQPPAPTADRPHLAKDAKEAMDFLATWARVTSGEEYFKGATYVGSEGCKGSGCHDQQIQEWR
Ga0310914_103889293	3300033289	Soil	MVVTGGQAMVVNFRSVAPALAWISTLGLAGLVLAQPPAPPTDRPHLAKDAKEAMDFLGTWARVTSGEEYFKGATYVGSEGCKGSGCHDKQIEEWRTTWHSKILTPPSAETVK
Ga0318519_100151461	3300033290	Soil	MVVNFHSVAPVLAWISTVSLAGLVSAQAPAPTADRPHLAKDAKEAMDFLATWARVTSGEEHFKGATYVGSESCKGSGCHDQQLAEWRTTWHSKILTLPSTETVTGNFNNAVIP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079727

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences