NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F079729

Metagenome / Metatranscriptome Family F079729

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F079729
Family Type Metagenome / Metatranscriptome
Number of Sequences 115
Average Sequence Length 45 residues
Representative Sequence PYTVRFMFPEPDGGALAKLTAMHIGNRQFYREFGWGEKSW
Number of Associated Samples 88
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 2.63 %
% of genes near scaffold ends (potentially truncated) 92.17 %
% of genes from short scaffolds (< 2000 bps) 93.04 %
Associated GOLD sequencing projects 85
AlphaFold2 3D model prediction Yes
3D model pTM-score0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (98.261 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(20.870 % of family members)
Environment Ontology (ENVO) Unclassified
(25.217 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(44.348 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 27.94%    β-sheet: 0.00%    Coil/Unstructured: 72.06%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 115 Family Scaffolds
PF00496SBP_bac_5 86.96
PF00989PAS 0.87
PF07883Cupin_2 0.87
PF00672HAMP 0.87
PF01494FAD_binding_3 0.87
PF13442Cytochrome_CBB3 0.87
PF00117GATase 0.87
PF01609DDE_Tnp_1 0.87
PF07310PAS_5 0.87
PF13700DUF4158 0.87

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 115 Family Scaffolds
COG06542-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductasesEnergy production and conversion [C] 1.74
COG0578Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 0.87
COG0644Dehydrogenase (flavoprotein)Energy production and conversion [C] 0.87
COG0665Glycine/D-amino acid oxidase (deaminating)Amino acid transport and metabolism [E] 0.87
COG3039Transposase and inactivated derivatives, IS5 familyMobilome: prophages, transposons [X] 0.87
COG3293TransposaseMobilome: prophages, transposons [X] 0.87
COG3385IS4 transposase InsGMobilome: prophages, transposons [X] 0.87
COG5388Uncharacterized conserved proteinFunction unknown [S] 0.87
COG5421TransposaseMobilome: prophages, transposons [X] 0.87
COG5433Predicted transposase YbfD/YdcC associated with H repeatsMobilome: prophages, transposons [X] 0.87
COG5659SRSO17 transposaseMobilome: prophages, transposons [X] 0.87

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.26 %
UnclassifiedrootN/A1.74 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2189573000|GPBTN7E01DJ7SHAll Organisms → cellular organisms → Bacteria520Open in IMG/M
3300002561|JGI25384J37096_10062494All Organisms → cellular organisms → Bacteria1385Open in IMG/M
3300003373|JGI25407J50210_10134757All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300003999|Ga0055469_10034563All Organisms → cellular organisms → Bacteria1255Open in IMG/M
3300005330|Ga0070690_101543124All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300005332|Ga0066388_100581128All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1746Open in IMG/M
3300005332|Ga0066388_103996296All Organisms → cellular organisms → Bacteria752Open in IMG/M
3300005332|Ga0066388_107937212All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria531Open in IMG/M
3300005336|Ga0070680_101946088All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300005445|Ga0070708_100495960All Organisms → cellular organisms → Bacteria1152Open in IMG/M
3300005468|Ga0070707_100605607All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → Bacillus infantis1058Open in IMG/M
3300005544|Ga0070686_100288795All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter xylanophilus1212Open in IMG/M
3300005557|Ga0066704_10903699All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300005576|Ga0066708_10776961All Organisms → cellular organisms → Bacteria602Open in IMG/M
3300005764|Ga0066903_100307686All Organisms → cellular organisms → Bacteria2515Open in IMG/M
3300005842|Ga0068858_102460824All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300005937|Ga0081455_10164690All Organisms → cellular organisms → Bacteria1695Open in IMG/M
3300006852|Ga0075433_10891368All Organisms → cellular organisms → Bacteria776Open in IMG/M
3300006853|Ga0075420_101539336All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300006854|Ga0075425_102062847All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300006854|Ga0075425_103088516All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300006880|Ga0075429_101956056All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300006904|Ga0075424_101361679All Organisms → cellular organisms → Bacteria754Open in IMG/M
3300006904|Ga0075424_102319300All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300006969|Ga0075419_10153816All Organisms → cellular organisms → Bacteria → Proteobacteria1506Open in IMG/M
3300006969|Ga0075419_11420669All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300007076|Ga0075435_101530407All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300009090|Ga0099827_10222207All Organisms → cellular organisms → Bacteria1578Open in IMG/M
3300009090|Ga0099827_10428595All Organisms → cellular organisms → Bacteria1132Open in IMG/M
3300009137|Ga0066709_102323617All Organisms → cellular organisms → Bacteria734Open in IMG/M
3300009147|Ga0114129_10439731All Organisms → cellular organisms → Bacteria1712Open in IMG/M
3300009147|Ga0114129_10598218All Organisms → cellular organisms → Bacteria1429Open in IMG/M
3300009147|Ga0114129_12328503All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300009162|Ga0075423_12178793All Organisms → cellular organisms → Bacteria602Open in IMG/M
3300009168|Ga0105104_10638561All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300009444|Ga0114945_10448894All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300010043|Ga0126380_10489760All Organisms → cellular organisms → Bacteria940Open in IMG/M
3300010043|Ga0126380_10696730All Organisms → cellular organisms → Bacteria816Open in IMG/M
3300010043|Ga0126380_12154170All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300010046|Ga0126384_11540177All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300010047|Ga0126382_10729702All Organisms → cellular organisms → Bacteria835Open in IMG/M
3300010336|Ga0134071_10063359All Organisms → cellular organisms → Bacteria1702Open in IMG/M
3300010359|Ga0126376_11728087All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300010359|Ga0126376_12813920All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300010359|Ga0126376_12840914All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300010360|Ga0126372_11212869All Organisms → cellular organisms → Bacteria779Open in IMG/M
3300010360|Ga0126372_11973985All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300010360|Ga0126372_13305208All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300010361|Ga0126378_11892003All Organisms → cellular organisms → Bacteria679Open in IMG/M
3300010362|Ga0126377_11128033All Organisms → cellular organisms → Bacteria → Proteobacteria853Open in IMG/M
3300010362|Ga0126377_11566036All Organisms → cellular organisms → Bacteria733Open in IMG/M
3300010366|Ga0126379_13311103All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300010398|Ga0126383_11794554All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300010398|Ga0126383_12743770All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300010398|Ga0126383_12792134All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300010398|Ga0126383_12836475All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300012189|Ga0137388_10781356All Organisms → cellular organisms → Bacteria885Open in IMG/M
3300012202|Ga0137363_11265964All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300012204|Ga0137374_10252158All Organisms → cellular organisms → Bacteria1479Open in IMG/M
3300012205|Ga0137362_10970327All Organisms → cellular organisms → Bacteria724Open in IMG/M
3300012207|Ga0137381_10575604All Organisms → cellular organisms → Bacteria981Open in IMG/M
3300012207|Ga0137381_11765608All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300012354|Ga0137366_10296371All Organisms → cellular organisms → Bacteria1191Open in IMG/M
3300012356|Ga0137371_11397511All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300012359|Ga0137385_11258206All Organisms → cellular organisms → Bacteria602Open in IMG/M
3300012361|Ga0137360_11329630All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300012361|Ga0137360_11415008All Organisms → cellular organisms → Bacteria598Open in IMG/M
3300012362|Ga0137361_10217815All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium1731Open in IMG/M
3300012582|Ga0137358_10838107All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300012925|Ga0137419_10233060All Organisms → cellular organisms → Bacteria1379Open in IMG/M
3300012927|Ga0137416_10802485All Organisms → cellular organisms → Bacteria832Open in IMG/M
3300012927|Ga0137416_11077870All Organisms → cellular organisms → Bacteria720Open in IMG/M
3300012929|Ga0137404_11783232All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300012948|Ga0126375_10448594All Organisms → cellular organisms → Bacteria947Open in IMG/M
3300012971|Ga0126369_11339429All Organisms → cellular organisms → Bacteria806Open in IMG/M
3300012977|Ga0134087_10060645All Organisms → cellular organisms → Bacteria1512Open in IMG/M
3300014150|Ga0134081_10031535All Organisms → cellular organisms → Bacteria1536Open in IMG/M
3300014263|Ga0075324_1075246All Organisms → cellular organisms → Bacteria694Open in IMG/M
3300014302|Ga0075310_1069599All Organisms → cellular organisms → Bacteria709Open in IMG/M
3300014310|Ga0075331_1097317All Organisms → cellular organisms → Bacteria686Open in IMG/M
3300015374|Ga0132255_103845485All Organisms → cellular organisms → Bacteria638Open in IMG/M
3300018074|Ga0184640_10391834All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300018079|Ga0184627_10125974All Organisms → cellular organisms → Bacteria1356Open in IMG/M
3300018082|Ga0184639_10218786All Organisms → cellular organisms → Bacteria1009Open in IMG/M
3300018082|Ga0184639_10286098All Organisms → cellular organisms → Bacteria868Open in IMG/M
3300018082|Ga0184639_10353784All Organisms → cellular organisms → Bacteria765Open in IMG/M
3300018433|Ga0066667_11443053All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300018466|Ga0190268_11732600All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300019233|Ga0184645_1117174All Organisms → cellular organisms → Bacteria896Open in IMG/M
3300022563|Ga0212128_10072148All Organisms → cellular organisms → Bacteria2226Open in IMG/M
3300025149|Ga0209827_10332347All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300025149|Ga0209827_10924088All Organisms → cellular organisms → Bacteria2834Open in IMG/M
3300025149|Ga0209827_11285285All Organisms → cellular organisms → Bacteria1328Open in IMG/M
3300025927|Ga0207687_10892927All Organisms → cellular organisms → Bacteria760Open in IMG/M
3300026324|Ga0209470_1024718All Organisms → cellular organisms → Bacteria3177Open in IMG/M
3300026534|Ga0256841_1211119All Organisms → cellular organisms → Bacteria713Open in IMG/M
3300027647|Ga0214468_1015433All Organisms → cellular organisms → Bacteria2121Open in IMG/M
3300027835|Ga0209515_10333179All Organisms → cellular organisms → Bacteria836Open in IMG/M
3300027846|Ga0209180_10693477All Organisms → cellular organisms → Bacteria554Open in IMG/M
(restricted) 3300027872|Ga0255058_10417872All Organisms → cellular organisms → Bacteria652Open in IMG/M
3300027882|Ga0209590_10626303All Organisms → cellular organisms → Bacteria691Open in IMG/M
3300027903|Ga0209488_10099294All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2180Open in IMG/M
3300027903|Ga0209488_10744293All Organisms → cellular organisms → Bacteria699Open in IMG/M
3300027907|Ga0207428_10297222All Organisms → cellular organisms → Bacteria1195Open in IMG/M
3300027950|Ga0209885_1042030All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300028536|Ga0137415_10683342All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium839Open in IMG/M
3300030904|Ga0308198_1053009All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300031114|Ga0308187_10051259All Organisms → cellular organisms → Bacteria1138Open in IMG/M
3300031114|Ga0308187_10430149All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300031229|Ga0299913_10945889All Organisms → cellular organisms → Bacteria830Open in IMG/M
3300031421|Ga0308194_10141185All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium734Open in IMG/M
3300031879|Ga0306919_10102029Not Available2020Open in IMG/M
3300032180|Ga0307471_100588524All Organisms → cellular organisms → Bacteria1271Open in IMG/M
3300033417|Ga0214471_10613289All Organisms → cellular organisms → Bacteria862Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil20.87%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil18.26%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere13.04%
Thermal SpringsEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs4.35%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment4.35%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.35%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.48%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.61%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil2.61%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands2.61%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.61%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.74%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.87%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.87%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater0.87%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.87%
Hydrothermal VentsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vents0.87%
SeawaterEnvironmental → Aquatic → Marine → Gulf → Unclassified → Seawater0.87%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.87%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.87%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.87%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.87%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.87%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.87%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.87%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.87%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere0.87%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.87%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2189573000Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)EnvironmentalOpen in IMG/M
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300003373Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1Host-AssociatedOpen in IMG/M
3300003999Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2EnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009168Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009444Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014263Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D1EnvironmentalOpen in IMG/M
3300014302Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D2EnvironmentalOpen in IMG/M
3300014310Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_TuleA_D1EnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018074Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2EnvironmentalOpen in IMG/M
3300018079Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1EnvironmentalOpen in IMG/M
3300018082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300019233Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022563OV2_combined assemblyEnvironmentalOpen in IMG/M
3300025149Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2 (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026534Hydrothermal vent microbial communities from Mid Atlantic Ridge, Atlantic Ocean - 356-308EnvironmentalOpen in IMG/M
3300027647Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38 HiSeqEnvironmentalOpen in IMG/M
3300027835Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027872 (restricted)Seawater microbial communities from Amundsen Gulf, Northwest Territories, Canada - Cases_109_9EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027950Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_40_50 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300030904Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031114Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031229Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38EnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033417Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
N55_054445402189573000Grass SoilQTVRSFPEPDGGALAKLSVMHIANRQFYRDVGWGETHW
JGI25384J37096_1006249413300002561Grasslands SoilIVDPQTIRFVFSEPDGGVLVKLSVMHIGNRQFYREVGWGEEHW*
JGI25407J50210_1013475723300003373Tabebuia Heterophylla RhizosphereVSPQIVRFIFPEPDGMALAKLSVMHIANRQFYREFGWDEKSW*
Ga0055469_1003456323300003999Natural And Restored WetlandsFKPGSRLEVLDAYTVRFVFPEPDGGALARLTLMHIGNRQFYREFGWDEKSW*
Ga0070690_10154312423300005330Switchgrass RhizosphereRNTVRFRFPEPDGVALVKLSVMHMASREFYRKAGWGEKHW*
Ga0066388_10058112833300005332Tropical Forest SoilQTVRFIFPEPDGGVLVKLNGLHIGNRQFHTELGWGEKHW*
Ga0066388_10399629623300005332Tropical Forest SoilNFQPGSRLEILDAQTVRFHFPQPDGAALIRLASLHIGNRQFYAELGWGEEHW*
Ga0066388_10793721213300005332Tropical Forest SoilIGPYTVRFVFPEPDGGALAKISFMHMGNRQFYRDVGWGTKDW*
Ga0070680_10194608813300005336Corn RhizosphereLLEQPHILGNFMNFKPGSKLEILNPYTVRFVFPELDGGALAKLTAMHIGNRQFYREFGWREKSW*
Ga0070708_10049596023300005445Corn, Switchgrass And Miscanthus RhizosphereEIIDPHTVRFVFPEPDGGAMARLVVMHMANRQFHSELGWGEKSW*
Ga0070707_10060560723300005468Corn, Switchgrass And Miscanthus RhizosphereLDPYLVRFVFSEPDGGALVKLSYMHIANRHFYRDLGWGEKSW*
Ga0070686_10028879523300005544Switchgrass RhizosphereRLEIVDPYTVRFVFPEPDGVALAKISIMHMANRQFYRDVGWGTEHW*
Ga0066704_1090369923300005557SoilTMDPYTVRFIFPEPDGGAMAKLASMHMANRQFYREVGWGEAHW*
Ga0066708_1077696123300005576SoilQFHFPEPDGAALVRLSALHIGNRQFHTELGWGEAHW*
Ga0066903_10030768653300005764Tropical Forest SoilTVQFHFPEPDGAALMRFAMLHMGNRQFHTELGWGEAHW*
Ga0068858_10246082423300005842Switchgrass RhizospherePHILGNFMNFKPGSKLEILNPYTVRFVFPELDGGALAKLTAMHIGNRQFYREFGWREKSW
Ga0081455_1016469013300005937Tabebuia Heterophylla RhizosphereHQSGPHWNFKPGSRLEIHDPYTVRFVFPEPDSGAMARFVLMHMANRQFHRELGWGERNW*
Ga0075433_1089136823300006852Populus RhizosphereLNPYTVRFRFPEPDGGALAKLSIMHIANRQFYREQGWGEKDW*
Ga0075420_10153933613300006853Populus RhizosphereFIFPEPDGGALVKLALAHIANRQFYRELGWGEKSW*
Ga0075425_10206284723300006854Populus RhizospherePYTVRFRFPEPDGGALAKLSIMHIANRQFYREQGWGEKDW*
Ga0075425_10308851613300006854Populus RhizosphereEIVDPYTVRFVFPEPDGAALIKLSSMHMGNRQFYAEHGWGEKHW*
Ga0075429_10195605613300006880Populus RhizosphereGARLETIDPYTVRFVFPEPDGGAVAKLTIMHIGNRQFYRESRWGEKSW*
Ga0075424_10136167923300006904Populus RhizosphereEIVDRQTVRFHFPEPDGVALLKISLLHMASREFYQKVGWGEQHW*
Ga0075424_10231930023300006904Populus RhizospherePYTVRFRFPELDGAALAKLSVMHIANRQFYREQGWGEKD*
Ga0075419_1015381613300006969Populus RhizosphereNWDESTRLEQPHRPGPYWNFTPGSRLEILDPYTVRFVFLEPDGGVMARLVLMHIGNRQFYHEFGWGEQSW*
Ga0075419_1142066923300006969Populus RhizosphereVRFVFPEPDGGALARLTLMHIGNRQFYREFGWDEKSW*
Ga0075435_10153040723300007076Populus RhizosphereGSRLEIIDPQTVRFVFPEPDGGALARLTLMHIGNRQFYSEFGWDEKSW*
Ga0099827_1022220733300009090Vadose Zone SoilNFPAGSKLEIITPQTVRFLFPAPDGGALAKLSIMHIANRQFYRDVGWGEAHW*
Ga0099827_1042859523300009090Vadose Zone SoilPGSRLEIVDPSTVRFVFPEPDGGALEKISIMHMANRQFYRDVGWGTEHW*
Ga0066709_10232361723300009137Grasslands SoilIDPYMVRFVFPEPDGGALHKLTHMHIANRQFYREFGWGEKRW*
Ga0114129_1043973133300009147Populus RhizosphereRHTVRFSFLEPDGAALVKLSTLHLGNRQFHRELGWGEKHW*
Ga0114129_1059821813300009147Populus RhizosphereNYMNFKPGSRLEILDPYTVRFVLPEPDGGAMAKLTSMHIGNRQFYGEFGWGEKSW*
Ga0114129_1232850323300009147Populus RhizosphereRIEIIDPYTVRFVFSEPDGMALGKLYWMHIANRQFYREFGWGEKHW*
Ga0075423_1217879323300009162Populus RhizosphereYMNFKPGSRLEILDPYTVRFVLPEPDGGAMAKLTSMHIGNRQFYGELGWGEKSW*
Ga0105104_1063856113300009168Freshwater SedimentTPQIVRFIFPEPDGGALEKLRAMHIGNRQFYRELGWGEKSW*
Ga0114945_1044889423300009444Thermal SpringsEIIDRYTVRFSFPEPDGAALVKLSIVHMGNRQFYRELGWGEKGW*
Ga0126380_1048976013300010043Tropical Forest SoilQRQPHISGQYMNFPAGSTLEILTPQTVRFRFAEPDGGALAKLSVMHIANRQFYRDVGWGETHW*
Ga0126380_1069673013300010043Tropical Forest SoilTVRFVLPEPDGGAMARLVQMHMPNRQFHREFGWGEKSW*
Ga0126380_1215417023300010043Tropical Forest SoilVFPEPDGGALARLTLMHIGNRQFYSEFGWDEKSW*
Ga0126384_1154017723300010046Tropical Forest SoilYFKPGSRVEIIGPYAVRFVFPEPDGGALAKISFMHMGNRQFYRDVGWGTRDW*
Ga0126382_1072970213300010047Tropical Forest SoilLEIIDPYTVRFVLPEPDGAAMARLVLTHMANRQFHRELGWEEKSW*
Ga0134071_1006335913300010336Grasslands SoilPHILGQYMNFKPGSKLEIVDPQTIRFVFSEPDGGVLVKLSVMHIGNRQFYREVGWGEEHW
Ga0126376_1172808713300010359Tropical Forest SoilGSRLEILDAHTVRFVFPAPDGGALHKLAHMHIANRQFYQEFGWGEKRW*
Ga0126376_1281392023300010359Tropical Forest SoilVRFHFPEPDGGALVRLSILHIGNRQFYRELGWGEAHW*
Ga0126376_1284091413300010359Tropical Forest SoilVRFIFPEPDGGALAKISLMHLGNRQFYRDVGWGTRDW*
Ga0126372_1121286913300010360Tropical Forest SoilVRFVFPEPDGGAVAKLTIMHVGNRQFYREVGWGEKSW*
Ga0126372_1197398513300010360Tropical Forest SoilMNFPAGSTLEVLTPQTVRFRFAVPDGGALAKLSVMHIANRQFYRDVGWGETHW*
Ga0126372_1330520823300010360Tropical Forest SoilVFGLEIIDAYTVRFVFPEPDGGALARLTLMHLGNRQFYREFGWGEKSW*
Ga0126378_1189200323300010361Tropical Forest SoilYTVRFVFPEPDGAALIKLSSMHMGNRQFYAEHGWGEKHW*
Ga0126377_1112803333300010362Tropical Forest SoilLEILDAQTVRFIFPTPDGAALAKLSAMHLGNRQFYRDMGWGEKHW*
Ga0126377_1156603613300010362Tropical Forest SoilRSGDYWNFKPGSRLEILDAHTVRFVLPEPDGGAMARLVQMHMPNRQFHREFGWGETSW*
Ga0126379_1331110323300010366Tropical Forest SoilRFVFPEPDGGVMAKLTIMHMANRQFYREVGWGEKSW*
Ga0126383_1179455423300010398Tropical Forest SoilQTLRFVFPEPDGGVLAKLSLLHIGNRQFYRDAGWG*
Ga0126383_1274377023300010398Tropical Forest SoilEIIDPYTVRFVFPEPDGCVLAKLTLMHMANRQFYRDVGWGEAHW*
Ga0126383_1279213423300010398Tropical Forest SoilHTVRFVFPEPDGGALVKLSILHIGNRQFYRELGWGEKHW*
Ga0126383_1283647523300010398Tropical Forest SoilMNFTPGSRLEILDAHTVRLVFPAPDGGALHKLAHMHIANRQFYQEFGWGEKRW*
Ga0137388_1078135613300012189Vadose Zone SoilIITPQTVRFLFPAPDGGALSKLSVMHIANRQFYRDVGWGETHW*
Ga0137363_1126596423300012202Vadose Zone SoilETIDPYTVRFVFPEPDGGAVAKLTIMHIGNRQFYGEFGWGEKSW*
Ga0137374_1025215833300012204Vadose Zone SoilFKSGSRLEIRDAQTVRFHFPEPDGAALVRLSILHMGNRQFYTELGWGEEHW*
Ga0137362_1097032723300012205Vadose Zone SoilTVRFVFPEPDGGALAKISIMHMANRQFYRDVGWGTEHW*
Ga0137381_1057560423300012207Vadose Zone SoilVDRYTVRILFPAPDGAALSKLAALHMANRQFYREHGWGEKQW*
Ga0137381_1176560823300012207Vadose Zone SoilLNAQTVRFHFPEPDGAALIRLASLHIGNRQFYAELGWGEEHW*
Ga0137366_1029637123300012354Vadose Zone SoilSHLEIIDPYTVRFVFPEPDGGALHKLTHMHIANRQFYREFGWGEKRW*
Ga0137371_1139751113300012356Vadose Zone SoilPYTVRFVFPEPDGGAMARLVIMHMANRQFHRELGWGEKSW*
Ga0137385_1125820623300012359Vadose Zone SoilFVFPEPDGAALIKLSSMHMGNRQFYAEHGWGEKHW*
Ga0137360_1132963023300012361Vadose Zone SoilGPYWNFKPGSRLEILDPHTVRFVFSEPDGGAMARLVLMHIGNRQFLHELGWGEKSW*
Ga0137360_1141500823300012361Vadose Zone SoilDPHTVRFVFPEPDGAALARLTLMHIGNRQFYHELGWGEASW*
Ga0137361_1021781513300012362Vadose Zone SoilVDPYTVRFVFPEPDGAALIKLSSMHMGNRQFYAEHGWGEKHW*
Ga0137358_1083810723300012582Vadose Zone SoilGSKLEIITPQTVRFLFSAADGGALAKLSLMHIANRQFYRDVGWGEKHW*
Ga0137419_1023306033300012925Vadose Zone SoilMNFKLGSLLEILDAQTVRFHFPEPDGAALVRLSMLHIGNRQFYTELGWGEAHW*
Ga0137416_1080248523300012927Vadose Zone SoilFIFPEPDGAALTKLSAMHLGNRQFYRDVGWGEKHW*
Ga0137416_1107787023300012927Vadose Zone SoilYTVRFIFPEPDGAVLTKFSIMHIGNRQFYREVGWGEKRW*
Ga0137404_1178323213300012929Vadose Zone SoilTIRFHFPEPDGAALARLSYIHIANRQFFREFGWGEKHW*
Ga0126375_1044859413300012948Tropical Forest SoilLTPQTVRFRFAAPDSGALAKFSLMHIANRQFYRDVGWGETHW*
Ga0126369_1133942923300012971Tropical Forest SoilMPGAYLNFQPGSRLEIVNAQTVRFHFREPDGGVLAKLVYLHIGNRQFYSEFGWGEESW*
Ga0134087_1006064513300012977Grasslands SoilTIRFHFAEPDGAALARLSYMHIANRQFFREFGWGEKHW*
Ga0134081_1003153513300014150Grasslands SoilRFHFAEPDGAALARLSYMHIANRQFFREFGWGEKHW*
Ga0075324_107524613300014263Natural And Restored WetlandsPYTVRFVFAEPDGGALAKLTIMHIGNREFYREFGWGEKSW*
Ga0075310_106959923300014302Natural And Restored WetlandsSRMEIIGSHTVRFIFPEPDGGALAKLTIMHIANRQFYQDVGWGTEHW*
Ga0075331_109731713300014310Natural And Restored WetlandsVRFIFPQPDGAALLKLSSMHIGNRQFYAEHGWGEKHW*
Ga0132255_10384548513300015374Arabidopsis RhizospherePYTVRFHFLEPDGGVLAKLVYMHIGNRQFLREFDWEEKGW*
Ga0184640_1039183413300018074Groundwater SedimentMNFKPGSRIEILDPYTVRFLFSEPDGAALIKIGWMHIGNREFYQKLGWGEKSW
Ga0184627_1012597413300018079Groundwater SedimentEILDPHTVRLVFPEPDGGALAKLSSVHIANRQFYRDFGWGEKSW
Ga0184639_1021878613300018082Groundwater SedimentPRTVRFVFSEPDGAALIKIAWMHIANRQFYREFGWGEKHW
Ga0184639_1028609823300018082Groundwater SedimentDPQTVRFVFPEPDGGALSKITFMHMTNRQFYRDVGWGTENW
Ga0184639_1035378423300018082Groundwater SedimentEIVDPQTIRFSFPAPDGGALVKIAVMHIANRQFYREVGWGEEHW
Ga0066667_1144305323300018433Grasslands SoilVNFKLGSRLEIRDAQTVRFHFPAPDGAALVRLSILHMGNRQFYTELGWGEEHW
Ga0190268_1173260013300018466SoilPYTVSFVFPETDGGALAKISMMHLANRQFYRDVGWGTEHW
Ga0184645_111717423300019233Groundwater SedimentMTFKPGSRLEIVTPQSVRFIFPEPDGGALAKLVVMHLGNRQFYRELGWGEKSW
Ga0212128_1007214843300022563Thermal SpringsMNFKPESRLEIRDPQTVRFVFSEPDGAALVKLMRMHLGNRQFYRDLGWREKGW
Ga0209827_1033234723300025149Thermal SpringsEVLDPYTVRFVFPEPDGAALAKLSLMHIANRQFYRDVGWGEKRW
Ga0209827_1092408813300025149Thermal SpringsRFVFPEPDGRALTKFRAMHMANRQFYREFGWGEKSW
Ga0209827_1128528513300025149Thermal SpringsPYTVRFMFPEPDGGALAKLTAMHIGNRQFYREFGWGEKSW
Ga0207684_1142814513300025910Corn, Switchgrass And Miscanthus RhizosphereRLKQPHIPGEFLNFKPGSKLEILDPYLVRFVFSEPDGGALVKLSYMHIANRHFYRDLGWGEKSW
Ga0207687_1089292713300025927Miscanthus RhizosphereGSKLEILNPYTVRFVFPELDGGALAKLTAMHIGNRQFYREFGWREKSW
Ga0209470_102471823300026324SoilMEIRDPYTIRFHFAEPDGAALARLSYMHIANRQFFREFGWGEKHW
Ga0256841_121111923300026534Hydrothermal VentsLQIIDPYTVRFRFPEPDGGALAKLTIMHMANRQFYHELGWGEKHW
Ga0214468_101543333300027647SoilNFKPGSKLEILDPYTVRFVFAEPDGGALAKLTIMHIGNREFYREFGWGEKSW
Ga0209515_1033317913300027835GroundwaterRLELIDPYTVRFVFPEPDGGALAKLTAMHIGNRQFYREFGWGEKSW
Ga0209180_1069347723300027846Vadose Zone SoilSRLEIIDPQTVRFIFPESDGAVLAKLSIMHIGNRQFYQELGWGERSW
(restricted) Ga0255058_1041787213300027872SeawaterQPHMLGSYMNFKPGSRLEIVDPYTIRFFFSEPDGGVIAKLIAMHIGNRQFYRELGWGEEH
Ga0209590_1062630323300027882Vadose Zone SoilRVEVIDPYTVRFVFPEPDGGALAKISFIHMGNRQFYRDVGWGTRDW
Ga0209488_1009929433300027903Vadose Zone SoilFHFPTPDGMALVKLSSMHIGSRQFWAEHGWGEQSW
Ga0209488_1074429323300027903Vadose Zone SoilGDYWNFKPGSRLEILDPHTVRFVLPEPDGGAMARLVQMHMPNRQFHREFGWGEKSW
Ga0207428_1029722213300027907Populus RhizosphereLGQPHISGAFMNFTPGSRLEILDAQTVRFIFPAPDGAALAKLSAMHLGNRQFYRDMGWGEKHW
Ga0209885_104203013300027950Groundwater SandDAHTVRFVFPEPDGAALARISFMHIGSRQFYRELGWGDKHW
Ga0137415_1068334223300028536Vadose Zone SoilFVFPEPDGAALARLTLMHIGNRQFYHELGWGEASW
Ga0308198_105300913300030904SoilDLYTVRFVFPEPDGGALAKISMMHMGNRQFYRDVGWGTKDW
Ga0308187_1005125923300031114SoilFIFPEPDGGAMAKLASMHMANSQFYREFGWGEKHW
Ga0308187_1043014913300031114SoilRFVFPEPDGGALVKLSNMHIANRQFYREFGWGEKSW
Ga0299913_1094588923300031229SoilGSRLEISDPYTIRFVLPEPDGGLLAKLSMLHIASRQFYRDFGWGEKSW
Ga0308194_1014118513300031421SoilRFVFPQPDGGALAKIGIMHMANRQFYRDVGWGTEHW
Ga0306919_1010202923300031879SoilFVFPEPDGGALHKLTHMHIANRQFYREFGWGEKRW
Ga0307471_10058852413300032180Hardwood Forest SoilKAGSRMEVIDPHTVRLVFSEPDGMALGKLTWMHIGNRQFYRELGWGEQHW
Ga0214471_1061328923300033417SoilPGSRLEVLDPYTVRFVFPEPDGGAMARLVNTHMANRQFHRDFGWGEKSW

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Bioinformatics & Integrated Biology Lab
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Biomedical Sciences Research Center "Alexander Fleming"
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