Metagenome / Metatranscriptome Family F079738

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079738
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	106 residues
Representative Sequence	MTDEPIVAEPEQAGHSTPPRPAAEMDDVLDMVWPETGLQTGCRVSSRPKDTLGEDDLVELEVDFVKLSLTPLEFIQLASFLRMSIDGLLERHPGLQRAVVNAFDIRD
Number of Associated Samples	75
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.74 %
% of genes near scaffold ends (potentially truncated)	29.57 %
% of genes from short scaffolds (< 2000 bps)	80.87 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (32.174 % of family members)
Environment Ontology (ENVO)	Unclassified (32.174 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.391 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.70% β-sheet: 18.52% Coil/Unstructured: 57.78%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF13531	SBP_bac_11	4.35
PF00149	Metallophos	4.35
PF00696	AA_kinase	3.48
PF00291	PALP	1.74
PF09995	MPAB_Lcp_cat	1.74
PF02585	PIG-L	0.87
PF00106	adh_short	0.87
PF03880	DbpA	0.87
PF01212	Beta_elim_lyase	0.87
PF03459	TOBE	0.87
PF01628	HrcA	0.87
PF01261	AP_endonuc_2	0.87
PF13419	HAD_2	0.87
PF13328	HD_4	0.87
PF00528	BPD_transp_1	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0513	Superfamily II DNA and RNA helicase	Replication, recombination and repair [L]	2.61
COG1167	DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain	Transcription [K]	1.74
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.87
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	0.87
COG0112	Glycine/serine hydroxymethyltransferase	Amino acid transport and metabolism [E]	0.87
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.87
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.87
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.87
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.87
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.87
COG1003	Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain	Amino acid transport and metabolism [E]	0.87
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	0.87
COG1420	Transcriptional regulator of heat shock response	Transcription [K]	0.87
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.87
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.87
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.87
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.87
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.87
COG3033	Tryptophanase	Amino acid transport and metabolism [E]	0.87
COG4992	Acetylornithine/succinyldiaminopimelate/putrescine aminotransferase	Amino acid transport and metabolism [E]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	83.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.61 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	26.09 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.87 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	10.43 %
Thermomicrobia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	3.48 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	1.74 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.87 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	0.87 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia	10.43 %
Thermomicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales	1.74 %
Sphaerobacteridae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae	1.74 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	1.74 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	0.87 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.87 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	10.43 %
Methylocucumis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocucumis	1.74 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples	1.74 %
Sphaerobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales	1.74 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.87 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.87 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	10.43 %
Methylocucumis oryzae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocucumis → Methylocucumis oryzae	1.74 %
uncultured Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	1.74 %
Sphaerobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae	1.74 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.87 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.87 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	10.43 %
Sphaerobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae	1.74 %
Methylocucumis oryzae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocucumis → Methylocucumis oryzae	1.74 %
uncultured Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	1.74 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.87 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.87 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	10.43 %
Methylocucumis oryzae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocucumis → Methylocucumis oryzae	1.74 %
uncultured Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	1.74 %
Sphaerobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter	0.87 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.87 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.87 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	10.43 %
Methylocucumis oryzae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocucumis → Methylocucumis oryzae	1.74 %
uncultured Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	1.74 %
Sphaerobacter thermophilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter → Sphaerobacter thermophilus	0.87 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.87 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.87 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2355896	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1527	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_14445004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1257	Open in IMG/M
3300000787\|JGI11643J11755_11341933	All Organisms → cellular organisms → Bacteria → Terrabacteria group	682	Open in IMG/M
3300004463\|Ga0063356_100164251	All Organisms → cellular organisms → Bacteria	2557	Open in IMG/M
3300004480\|Ga0062592_101332588	All Organisms → cellular organisms → Bacteria → Terrabacteria group	679	Open in IMG/M
3300005329\|Ga0070683_100254205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter → Sphaerobacter thermophilus	1671	Open in IMG/M
3300005366\|Ga0070659_102128186	All Organisms → cellular organisms → Bacteria → Terrabacteria group	504	Open in IMG/M
3300005532\|Ga0070739_10037704	All Organisms → cellular organisms → Bacteria	3389	Open in IMG/M
3300006038\|Ga0075365_10295042	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300006051\|Ga0075364_10920213	All Organisms → cellular organisms → Bacteria → Terrabacteria group	595	Open in IMG/M
3300006092\|Ga0082021_1128712	All Organisms → cellular organisms → Bacteria	11732	Open in IMG/M
3300006845\|Ga0075421_102365841	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300006853\|Ga0075420_101043056	All Organisms → cellular organisms → Bacteria → Terrabacteria group	703	Open in IMG/M
3300006876\|Ga0079217_10320829	All Organisms → cellular organisms → Bacteria → Terrabacteria group	870	Open in IMG/M
3300006876\|Ga0079217_10335848	All Organisms → cellular organisms → Bacteria → Terrabacteria group	857	Open in IMG/M
3300006918\|Ga0079216_10115958	All Organisms → cellular organisms → Bacteria	1330	Open in IMG/M
3300006918\|Ga0079216_11524265	All Organisms → cellular organisms → Bacteria → Terrabacteria group	561	Open in IMG/M
3300007521\|Ga0105044_10120160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2874	Open in IMG/M
3300007790\|Ga0105679_10345619	All Organisms → cellular organisms → Bacteria	1487	Open in IMG/M
3300009147\|Ga0114129_12689030	All Organisms → cellular organisms → Bacteria → Terrabacteria group	593	Open in IMG/M
3300009147\|Ga0114129_13329729	All Organisms → cellular organisms → Bacteria → Terrabacteria group	519	Open in IMG/M
3300009789\|Ga0126307_10002932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	11603	Open in IMG/M
3300009789\|Ga0126307_10092836	All Organisms → cellular organisms → Bacteria	2387	Open in IMG/M
3300009789\|Ga0126307_10097479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocucumis → Methylocucumis oryzae	2328	Open in IMG/M
3300009789\|Ga0126307_10459808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1027	Open in IMG/M
3300009789\|Ga0126307_10627414	All Organisms → cellular organisms → Bacteria → Terrabacteria group	867	Open in IMG/M
3300009789\|Ga0126307_10792176	All Organisms → cellular organisms → Bacteria → Terrabacteria group	765	Open in IMG/M
3300009789\|Ga0126307_11550246	All Organisms → cellular organisms → Bacteria → Terrabacteria group	538	Open in IMG/M
3300009840\|Ga0126313_10120155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1954	Open in IMG/M
3300009840\|Ga0126313_10626565	All Organisms → cellular organisms → Bacteria → Terrabacteria group	868	Open in IMG/M
3300009840\|Ga0126313_10738730	All Organisms → cellular organisms → Bacteria → Terrabacteria group	798	Open in IMG/M
3300010037\|Ga0126304_10152502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1495	Open in IMG/M
3300010037\|Ga0126304_10397670	All Organisms → cellular organisms → Bacteria → Terrabacteria group	920	Open in IMG/M
3300010037\|Ga0126304_10787535	All Organisms → cellular organisms → Bacteria → Terrabacteria group	644	Open in IMG/M
3300010038\|Ga0126315_10312083	All Organisms → cellular organisms → Bacteria → Terrabacteria group	972	Open in IMG/M
3300010038\|Ga0126315_10475979	All Organisms → cellular organisms → Bacteria → Terrabacteria group	794	Open in IMG/M
3300010038\|Ga0126315_10476817	All Organisms → cellular organisms → Bacteria → Terrabacteria group	793	Open in IMG/M
3300010038\|Ga0126315_10616596	All Organisms → cellular organisms → Bacteria → Terrabacteria group	702	Open in IMG/M
3300010038\|Ga0126315_10663125	All Organisms → cellular organisms → Bacteria → Terrabacteria group	678	Open in IMG/M
3300010039\|Ga0126309_10314431	All Organisms → cellular organisms → Bacteria → Terrabacteria group	910	Open in IMG/M
3300010039\|Ga0126309_10342547	All Organisms → cellular organisms → Bacteria → Terrabacteria group	877	Open in IMG/M
3300010039\|Ga0126309_10549663	All Organisms → cellular organisms → Bacteria → Terrabacteria group	719	Open in IMG/M
3300010040\|Ga0126308_10092886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1835	Open in IMG/M
3300010040\|Ga0126308_10138905	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1525	Open in IMG/M
3300010041\|Ga0126312_10033755	All Organisms → cellular organisms → Bacteria	3417	Open in IMG/M
3300010041\|Ga0126312_10082838	All Organisms → cellular organisms → Bacteria	2176	Open in IMG/M
3300010041\|Ga0126312_10452252	All Organisms → cellular organisms → Bacteria → Terrabacteria group	916	Open in IMG/M
3300010042\|Ga0126314_10196601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1419	Open in IMG/M
3300010042\|Ga0126314_11472230	All Organisms → cellular organisms → Bacteria → Terrabacteria group	512	Open in IMG/M
3300010044\|Ga0126310_10082294	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1899	Open in IMG/M
3300010044\|Ga0126310_11004256	All Organisms → cellular organisms → Bacteria → Terrabacteria group	657	Open in IMG/M
3300010045\|Ga0126311_10285916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1236	Open in IMG/M
3300010045\|Ga0126311_10294761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1219	Open in IMG/M
3300010045\|Ga0126311_10786336	All Organisms → cellular organisms → Bacteria → Terrabacteria group	766	Open in IMG/M
3300010166\|Ga0126306_10107407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocucumis → Methylocucumis oryzae	2026	Open in IMG/M
3300010166\|Ga0126306_10277802	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1284	Open in IMG/M
3300010166\|Ga0126306_10481038	All Organisms → cellular organisms → Bacteria → Terrabacteria group	980	Open in IMG/M
3300010166\|Ga0126306_11254896	All Organisms → cellular organisms → Bacteria → Terrabacteria group	610	Open in IMG/M
3300010349\|Ga0116240_10999450	All Organisms → cellular organisms → Bacteria → Terrabacteria group	532	Open in IMG/M
3300010373\|Ga0134128_11134015	All Organisms → cellular organisms → Bacteria → Terrabacteria group	863	Open in IMG/M
3300012092\|Ga0136621_1166558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	879	Open in IMG/M
3300012212\|Ga0150985_110329420	All Organisms → cellular organisms → Bacteria → Terrabacteria group	546	Open in IMG/M
3300012212\|Ga0150985_111604374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1628	Open in IMG/M
3300012212\|Ga0150985_116268002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2826	Open in IMG/M
3300012469\|Ga0150984_108258571	All Organisms → cellular organisms → Bacteria	2701	Open in IMG/M
3300012679\|Ga0136616_10307562	All Organisms → cellular organisms → Bacteria → Terrabacteria group	722	Open in IMG/M
3300012680\|Ga0136612_10141007	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300012680\|Ga0136612_10590675	All Organisms → cellular organisms → Bacteria → Terrabacteria group	564	Open in IMG/M
3300012684\|Ga0136614_10044901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3332	Open in IMG/M
3300012911\|Ga0157301_10435164	All Organisms → cellular organisms → Bacteria → Terrabacteria group	517	Open in IMG/M
3300013024\|Ga0170682_1094621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	543	Open in IMG/M
3300014272\|Ga0075327_1224780	All Organisms → cellular organisms → Bacteria → Terrabacteria group	606	Open in IMG/M
3300017787\|Ga0183260_10037473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3638	Open in IMG/M
3300017787\|Ga0183260_10173548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1526	Open in IMG/M
3300017789\|Ga0136617_10030759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4789	Open in IMG/M
3300017789\|Ga0136617_11492718	All Organisms → cellular organisms → Bacteria → Terrabacteria group	503	Open in IMG/M
3300018422\|Ga0190265_11399004	All Organisms → cellular organisms → Bacteria → Terrabacteria group	815	Open in IMG/M
3300018432\|Ga0190275_10219935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1811	Open in IMG/M
3300018432\|Ga0190275_13063046	All Organisms → cellular organisms → Bacteria → Terrabacteria group	541	Open in IMG/M
3300018465\|Ga0190269_10250498	All Organisms → cellular organisms → Bacteria → Terrabacteria group	998	Open in IMG/M
3300018465\|Ga0190269_10912688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	650	Open in IMG/M
3300018466\|Ga0190268_11077530	All Organisms → cellular organisms → Bacteria → Terrabacteria group	651	Open in IMG/M
3300018877\|Ga0193600_1090315	All Organisms → cellular organisms → Bacteria → Terrabacteria group	724	Open in IMG/M
3300018910\|Ga0193598_1135865	All Organisms → cellular organisms → Bacteria → Terrabacteria group	558	Open in IMG/M
3300018933\|Ga0193614_1063344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	1040	Open in IMG/M
3300018939\|Ga0193593_1134588	All Organisms → cellular organisms → Bacteria → Terrabacteria group	604	Open in IMG/M
3300019356\|Ga0173481_10867163	All Organisms → cellular organisms → Bacteria → Terrabacteria group	506	Open in IMG/M
3300020070\|Ga0206356_10617054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	695	Open in IMG/M
3300025932\|Ga0207690_10792863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	783	Open in IMG/M
3300025944\|Ga0207661_10845655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	842	Open in IMG/M
3300027773\|Ga0209810_1047863	All Organisms → cellular organisms → Bacteria	2279	Open in IMG/M
3300027850\|Ga0209591_10102852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2515	Open in IMG/M
3300027886\|Ga0209486_11086670	All Organisms → cellular organisms → Bacteria → Terrabacteria group	542	Open in IMG/M
3300027909\|Ga0209382_11792573	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300028006\|Ga0247717_1045625	All Organisms → cellular organisms → Bacteria → Terrabacteria group	687	Open in IMG/M
3300028812\|Ga0247825_10894957	All Organisms → cellular organisms → Bacteria → Terrabacteria group	643	Open in IMG/M
3300030496\|Ga0268240_10152735	All Organisms → cellular organisms → Bacteria → Terrabacteria group	570	Open in IMG/M
3300031058\|Ga0308189_10128498	All Organisms → cellular organisms → Bacteria → Terrabacteria group	843	Open in IMG/M
3300031450\|Ga0272433_10000720	All Organisms → cellular organisms → Bacteria	66729	Open in IMG/M
3300031450\|Ga0272433_10012694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae	8813	Open in IMG/M
3300031454\|Ga0272427_1000411	All Organisms → cellular organisms → Bacteria	111504	Open in IMG/M
3300031454\|Ga0272427_1124692	All Organisms → cellular organisms → Bacteria → Terrabacteria group	868	Open in IMG/M
3300031473\|Ga0272434_1284245	All Organisms → cellular organisms → Bacteria → Terrabacteria group	728	Open in IMG/M
3300031473\|Ga0272434_1308253	All Organisms → cellular organisms → Bacteria → Terrabacteria group	667	Open in IMG/M
3300031548\|Ga0307408_100077659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2473	Open in IMG/M
3300031731\|Ga0307405_11091810	All Organisms → cellular organisms → Bacteria → Terrabacteria group	685	Open in IMG/M
3300031824\|Ga0307413_10445081	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1027	Open in IMG/M
3300031852\|Ga0307410_10507895	All Organisms → cellular organisms → Bacteria → Terrabacteria group	993	Open in IMG/M
3300031911\|Ga0307412_10303598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1263	Open in IMG/M
3300031995\|Ga0307409_100602046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1086	Open in IMG/M
3300031996\|Ga0308176_10788034	All Organisms → cellular organisms → Bacteria → Terrabacteria group	992	Open in IMG/M
3300032002\|Ga0307416_100003282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	9455	Open in IMG/M
3300032005\|Ga0307411_12103205	All Organisms → cellular organisms → Bacteria → Terrabacteria group	528	Open in IMG/M
3300032005\|Ga0307411_12203075	All Organisms → cellular organisms → Bacteria → Terrabacteria group	517	Open in IMG/M
3300034391\|Ga0334917_126632	All Organisms → cellular organisms → Bacteria → Terrabacteria group	502	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.26%
Host-Associated	Host-Associated	20.00%
Engineered	Engineered	1.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.70%
Plants	Host-Associated → Plants	20.00%
Aquatic	Environmental → Aquatic	9.57%
Wastewater	Engineered → Wastewater	1.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.78%
Freshwater	Environmental → Aquatic → Freshwater	9.57%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	5.22%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.48%
Roots	Host-Associated → Plants → Roots	1.74%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.87%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.87%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.17%
Ice	Environmental → Aquatic → Freshwater → Ice	9.57%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	5.22%
Sand	Environmental → Terrestrial → Soil → Sand	4.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.61%
Loam	Environmental → Terrestrial → Soil → Loam	1.74%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.74%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.87%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	0.87%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.87%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.87%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.87%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.17%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	7.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.22%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	5.22%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	4.35%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.61%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	1.74%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.74%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.87%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	0.87%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.87%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.87%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	32.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.70%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	7.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	7.83%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	5.22%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.35%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.35%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	3.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.61%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.61%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	1.74%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.74%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.74%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.87%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.87%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.87%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	0.87%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.87%
Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Rock	0.87%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.87%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.87%
Wastewater Treatment Plant	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater Treatment Plant	0.87%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006092	Activated sludge microbial communities from wastewater treatment plant in Ulu Pandan, Singapore	Engineered	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007521	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01	Environmental	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010349	AD_HKTAca	Engineered	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300012092	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ445A (23.06)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012679	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ299 (21.06)	Environmental	Open in IMG/M
3300012680	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300013024	Gypsum crust hypoendolithic microbial communities from the Atacama Desert, Chile - KM37, HE	Environmental	Open in IMG/M
3300014272	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1	Environmental	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018877	Soil crust microbial communities from Colorado Plateau, Utah, USA - late stage, 42 hrs after wetting v1	Environmental	Open in IMG/M
3300018910	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 18 hrs after wetting v1	Environmental	Open in IMG/M
3300018933	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 42 hrs v1	Environmental	Open in IMG/M
3300018939	Soil crust microbial communities from Colorado Plateau, Utah, USA - midlate stage, 9 hrs after wetting v1	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027850	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01 (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028006	Soil microbial communities from hillslope of Landscape Evolution Observatory, University of Arizona, Oracle, AZ, United States - 2-4-E_N	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031450	Rock endolithic microbial communities from Victoria Land, Antarctica - University Valley sud	Environmental	Open in IMG/M
3300031454	Rock endolithic microbial communities from Victoria Land, Antarctica - Siegfried Peak sud	Environmental	Open in IMG/M
3300031473	Rock endolithic microbial communities from Victoria Land, Antarctica - Trio Nunatak nord	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300034391	Biocrust microbial communities from Mojave Desert, California, United States - 13HMC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_23558962	3300000033	Soil	MTDEPIVARPEEAGDYTPPRPPAEMDDLLDMVWPETGLQTGCRVSSRPKDTLGEDDLVELEVDFLKLSLTPLEFIQLASFLRMSIDGLLERHPGLQRAVVNAFDIPD*
ICChiseqgaiiFebDRAFT_144450042	3300000363	Soil	MTDEPIVAEPDDGGGRTPPRPAAELDEILEMVWPETGLQTGCRVSRRPQDALGEDDVVELDIDFVKLSLSPLEFIQLAAFLRMSVDGLLDRHPGLQRAVVNAFDIQG*
JGI11643J11755_113419331	3300000787	Soil	MTDEPIVARPEEAGDYTPPRPPXEMDDLLDMVWPETGLQTGCRVSSRPKDTLGEDDLVELEVDFLKLSLTPLEFIQLASFLRMSIDGLLERHPGLQRAVVNAF
Ga0063356_1001642513	3300004463	Arabidopsis Thaliana Rhizosphere	MTDEPIVAEPDDGGGRTPPRPAAELDEVLEMVWPETGLQTGCRVSRRPQDALGEDDVVELDIDFVKLSLSPLEFIQLAAFLRMSVDGLLDRHPGLQRAVVNAFDIQG*
Ga0062592_1013325882	3300004480	Soil	MTDEPIIAEPENGDHGPLRAPAEMDDVLDMVWPETGLQTGCRVSSRPRNTLGEDDLVELEVDFVRLSLSPLEFIQLASFLRMSIDGLLERHPDLQRAVVNAFDIRD*
Ga0070683_1002542052	3300005329	Corn Rhizosphere	MTDDAIVVEPNEGATRQVRPPSPMDDMLDIVWPETGLQTGCRVSTRERDTLGEDDVVELEIDFVRLSLSPLEFIQLASFLRMSVDGLLERHPGLQRAVVNAFDIRG*
Ga0070659_1021281861	3300005366	Corn Rhizosphere	MTDDAIVVEPNEGATRPVRPPSPMDDMLDIVWPETGLQTGCRVSTRERDTLGEDDVVELEIDFVRLSLSPLEFIQLASFLRMSVDGLLERHPGLQRAVVNAFDIR
Ga0070739_100377042	3300005532	Surface Soil	MSEQPHRDRPEPATPAARDELTEVLDMIWPETGLQTTSRVTRRPKDQLSESDTVELQIDFLTLSLTPLEFIQLASFLRMSIDGLLDQHPSLQRAVVNAFDIRD*
Ga0075365_102950422	3300006038	Populus Endosphere	MEHEPITAEPRQASTRPAVRPVVPFAEMLDMVWPETGLQTSSRVSQRPRDTLGEDDVVELEIDFVRLALTPLEFIQLASFMRMTVDGLLEQHPGLQRAVVNAFDIRD*
Ga0075364_109202131	3300006051	Populus Endosphere	MEPEPIAAEPQRPSIRPEVRPASPLADILDMVWPETGLQTSSRVSQRPRDTLGEDDVVELEIDFVRLALTPLEFIQLASFLRMTVDGLLEQHPGLQRAVVNAFDIRD*
Ga0082021_112871211	3300006092	Wastewater Treatment Plant	MEPEPITAEPRHPATRPEVRPAAPFAEILDMDWPETGLRTSSRVSQRPRDTLGEDDVVELEIDFVRLSLTPLEFIQLASFLRMTVDGLLEQHPGLQRAVVNAFDIRD*
Ga0075421_1023658411	3300006845	Populus Rhizosphere	MICPVVFAAIHKEVGMTDEPIIAEPEDGVTRPPARPAADLDEVLEMVWPETGLQTGCRVSRRPIDALGEDDVVELDIDFVKLSLSPLEFIQFAAFLRLSVDGLLDRHPGLQRAVVNAFDIQG*
Ga0075420_1010430562	3300006853	Populus Rhizosphere	MICPVVFAAIHKEVGMTDEPIIAEPEDGVTRTPARPAADLDEVLEMVWPETGLQTGCRVSRRPIDALGEDDVVELDIDFVKLSLSPLEFIQFAAFLRLSVDGLLDRHPGLQRAVVNAFDIQG*
Ga0079217_103208292	3300006876	Agricultural Soil	MTDEPIVAEPEEGGRHTSPRAPAEMDDVIEMVWPETGLQTGCRVSSRLKDTIGEDDVVELVVDFVTLSLSPLEFIQLASFLRMSVDGLLDRHPGLQRAVVNAFDIRD*
Ga0079217_103358482	3300006876	Agricultural Soil	MTDEPIVAEPKEGGGHTSPRPPAEMDDVIDIVWPETGLQTGCRVSSRPKDTLGEDDVVELEIDFVTLSLSPLEFIQLASFLRMSVDGLLDRHPGLQRAVVNAFDIRD*
Ga0079216_101159582	3300006918	Agricultural Soil	MTDEPIVAEPEEGGGHTSPRPPAEMDDVIDIVWPETGLQTGCRVSSRPKDTLGEDDVVELEIDFVTLSLSPLEFIQLASFLRMSVDGLLDRHPSLQRAVVNAFDIRD*
Ga0079216_115242651	3300006918	Agricultural Soil	MTDEPIVAEPENGGDSTPPRPPAEMDDVLDMVWPETGLQTGCRVSSRPKDTLGEDDLVELEVDFVTLSLSPLEFIQLASFLRMSIDGLLERHPGL
Ga0105044_101201603	3300007521	Freshwater	MTDEPIVAEPEDQNRRPQPRLRAEMDEMLDMVWPETGLQTGARVSLRAKDALGEDDVVELDIDFVKLSLSPLEFIQLASFLRMTVDGLLDRHPGLQRAVVNAFDIRE*
Ga0105679_103456191	3300007790	Soil	MVDEPIVAELGEGEIRTPPRPATEMEDVLDMVWPETGLQTGCRVSVRPKDALSEDDVVELEIDFVRLSLSPLEFIQLASFLRMSIDGLLDRHPGLQRAVVNAFDIPD*
Ga0114129_126890301	3300009147	Populus Rhizosphere	MTDEPIVAEPGAGAGQRPTRPLASLEEVLEMVWPETGLQTGCRVSRRPQDALGEDDVIELAVDFVTLSLSPLEFIQLASFMRMSVDGLLDRHPGLQQAVVNAFDIRS*
Ga0114129_133297291	3300009147	Populus Rhizosphere	MTDDEPIVAEPEERGSRVPIRPPAAMEDVLDMVWPETGLQTGCRISSRPKDTLGEDDVVELDIDFVKLSLSPLEFIQLASFLRMSIDGLLERHP
Ga0126307_100029324	3300009789	Serpentine Soil	MTDERIIAEPEESGNSTPPRPAAELDDVLDMVWPETGLQTGCRVSSRPKDTLGEDDLVELEVDFVKLSLTPLEFIQLASFLRMSVDGLLERHPGLQRAVVNAFDIRD*
Ga0126307_100928362	3300009789	Serpentine Soil	MTDEPIVAEPEDGRVSTPLRPTAEMDDVLDMVWPETGLQTGCRVSSRPKDTLGEDDLVELEVDFVTLSLTPLEFIQLASFLRMSIDGLLERHPELQRAVVNAFDIRD*
Ga0126307_100974791	3300009789	Serpentine Soil	VLEVPIVAEPSGENDTSARPAEMEDVLDIVWPETGLQTGCRVSSRPRDTLGEDDLVELEIDFVKLTLSPLEFIQLASFLRMSIDELLERHPGLQRAVVNAFDIRD*
Ga0126307_104598082	3300009789	Serpentine Soil	MTDKPIGAEPGEGGRTPLRPPAEMDNVLDMVWPETGLQTGCRVSSRAKDTLGEDDLIELEVDFVTLSLSPLEFIQLASFLRMSIDGLLERHPGLQRAVVNAFDIR
Ga0126307_106274142	3300009789	Serpentine Soil	MTDGLIVAEPEEVGNSTPPRPAAEMDDVLDMVWPETGLQTGCRVSSRPKDTLGEDDLVELEIDFLKLSLTPLEFIQLASFLRMSVDGLLERHPGLQRAVVNAFDIRD*
Ga0126307_107921761	3300009789	Serpentine Soil	MTDGPIVAEPEEAGDYTPPRPQAEMDDLLDMVWPETGLQTGCRVSSRPKDTLGEDDLVELEVDFVKLSLTPLEFIQLASFMRMSIDGLLERHPGLQRAVVNAFDIPD*
Ga0126307_115502461	3300009789	Serpentine Soil	MTDEPIVAEPEQGGRHTSPRAPAELDDVIEMVWPETGLQTGCRVSSRPKDTLGEDDVVELEVDFVTLSLSPLEFIQLASFLRMSVDGLLDRHPGLQRAVVNAFDIRD*
Ga0126313_101201551	3300009840	Serpentine Soil	MTDEPIVARPEEAGDYTPPRPPAEMDDLLDMVWPETGLQTGCRVSSRPKDTLGEDDLVELEVDFVKLSLTPLEFIQLASFLRMSIDGLLERHPGLQRAVVNAFDIPD*
Ga0126313_106265652	3300009840	Serpentine Soil	MTDKPIGAEPGEGGHTPLRPPAEMDNVLDMVWPETGLQTGCRVSSRAKDTLGEDDLIELEVDFVTLSLSPLEFIQLASFLRMSIDGLLERHPGLQRAVVNAFDIRD*
Ga0126313_107387301	3300009840	Serpentine Soil	MVDEPIVAEPKDGGDHTPPRPATEMDDVLDMVWPETGLQTGCRVSSRPINRLGEDDVVELEVDFVRLSLSPLEFIQLASFLRMSIDGLLERHPGLQRAVVNAFDIRD*
Ga0126304_101525022	3300010037	Serpentine Soil	RHLVSPQESPMTDGPIVAEPEEAGDYTPPRPQAEMDDLLDMVWPETGLQTGCRVSSRPKDTLGEDDLVELEVDFVKLSLTPLEFIQLASFLRMSIDGLLERHPGLQRAVVNAFDIPD*
Ga0126304_103976701	3300010037	Serpentine Soil	MTDEPIVAEPDQRGNRVPVRAAAAMDDVLDMVWPETGLQTGCRVSSRPKDTLGEDDVVELDIDFVKLSLSPLEFIQLASFLRMSIDGLLERHPGMQRAVVNAFDIPD*
Ga0126304_107875351	3300010037	Serpentine Soil	VAEPEEGGGPVLPRLPTEMDDVIDMVWPETGLQTGCRVSSRPKDTLGEDDVVELEVDFIRLSLSPLEFIQLASFLRMSIDGLLERHPGLQRAVVNAFDIRD*
Ga0126315_103120831	3300010038	Serpentine Soil	MTDEPIVAEPEEGGRTPLRPPAEMDDVLDMVWPETGLQTGCRVSSRAKDTLGEDDLIELEVDFVTLSLSPLEFIQLASFLRMSIDGLLERHPGLQRAVVNAFDIRD*
Ga0126315_104759791	3300010038	Serpentine Soil	DERIIAEPEESGNSTPPRPAAELDDVLDMVWPETGLQTGCRVSSRPKDTLGDDDLVELEIDFVKLSLTPLEFIQLASFLRMSVDGLLERHPGLQRAVVNAFDIRD*
Ga0126315_104768172	3300010038	Serpentine Soil	MSDEPIVAEPEEGRVYTPPRPAVEMDDVLDMVWPETGLQTGCRVSSRPKDTLGEDDLVELEVDFVTLSLSPLEFIQLASFLRMSIDGLLERHPELQRAVVNAFDIRD*
Ga0126315_106165962	3300010038	Serpentine Soil	MVDEPIVAEPKDGGDHTPPRPATEMDDVLDMVWPETGLQTGCRVSSRPKNRLGEDDVVELEVDFVRLSLSPLEFIQLASFLRMSIDGLLERHPGLQRAVVNAFDIHD*
Ga0126315_106631251	3300010038	Serpentine Soil	RHLNSPRESQMTDEPIVAEPEDGRVSTPLRPTAEMDDVLDMVWPETGLQTGCRVSSRPKDTLGEDDLVELEVDFVTLSLTPLEFIQLASFLRMSIDGLLERHPELQRAVVNAFDIRD*
Ga0126309_103144311	3300010039	Serpentine Soil	MTDKPIGAEPGEGGRTPLRPPAEMDNVLDMVWPETGLQTGCRVSSRAKDTLGEDDLIELEVDFVTLSLSPLEFIQLASFLRMSIDGLLERHPGLQRAVVNAFDIRD*
Ga0126309_103425471	3300010039	Serpentine Soil	RPAVEMDVVLDIVWPETGLQTGCRVSSRPKDTLGEDDVVELEVDFVKLSLTPLEFIQLASFLRMSIDGLLERHPGLQRAVVNAFDIPD*
Ga0126309_105496631	3300010039	Serpentine Soil	MTDEPIVAQPEEAGDYTPPRPQAEMDDLLDMVWPETGLQTGCRVSSRPKDTLGEDDLVELEVDFVKLSLTPLEFIQLASFLRMSIDGLLERHPGLQRAVVNAFDIRD*
Ga0126308_100928863	3300010040	Serpentine Soil	MTDERIIAEPEESGNSTPPRPAAELDDVLDMVWPETGLQTGCRVSSRPKDTLGEDDLVELEIDFVKLSLTPLEFIQLASFLRMSVDGLLERHPGLQRAVVNAFDIRD*
Ga0126308_101389052	3300010040	Serpentine Soil	MSDEPIVAEPEEGRVYTPPRPAVEMDDVLDMIWPETGLQTGCRVSSRPKDTLGEDDLVELEVDFVTLSLSPLEFIQLASFLRMSIDGLLERHPELQRAVVNAFDIRD*
Ga0126312_100337553	3300010041	Serpentine Soil	MVDEPIVAEPKDGGDHTPPRPATEMDDVLDMVWPETGLQTGCRVSSRPTNRLGEDDVVELEVDFVRLSLSPLEFIQLASFLRMSIDGLLERHPGLQRAVVNAFDIHD*
Ga0126312_100828383	3300010041	Serpentine Soil	MTDEPIVARPEEAGDYTPPRPPAEMDDLLDMVWPETGLQTGCRVSSRPKDTLGEDDLVELEVDFVKLSLTPLEFIQLASFLRMSVDGLLERHPGLQRAVVNAFDIRD*
Ga0126312_104522522	3300010041	Serpentine Soil	MTDKPIGAEPGEGGRTPLRPPAEMDNVLDMVWPETGLQTGCRISSRAKDTLGEDDLIELEVDFVTLSLSPLEFIQLASFLRMSIDGLLERHPGLQRAVVNAFDIRD*
Ga0126314_101966012	3300010042	Serpentine Soil	MTDGPIVAEPEEAGDYTPPRPQAEMDDLLDMVWPETGLQTGCRVSSRPKDTLGEDDLVELEVDFVKLSLTPLEFIQLASFLRMSIDGLLERHPGLQRAVVNAFDIPD*
Ga0126314_114722301	3300010042	Serpentine Soil	MTDEPIVAQPVEAADYTPPRPPAEMDDLLDMVWPETGLQTRCRVSSRPKGTLGEDDLVELEVDFVKLSLTPLEFIQLASFLRMSIDGLLERHPGLQRAVVNAFDI
Ga0126310_100822942	3300010044	Serpentine Soil	VLEEPIVAEPSGENDTSARPAEMEDVLDIVWPETGLQTGCRVSSRPRDTLGEDDLVELEIDFVKLTLSPLEFIQLASFLRMSIDELLERHPGLQRAVVNAFDIRD*
Ga0126310_110042561	3300010044	Serpentine Soil	MTDEPIVAQPEEAGDYTPPRPPAEMDDLLDMVWPETGLQTGCRVSSRPKGTLGEDDLVELEVDFVKLSLTPLEFIQLASFLRMSIDGLLERHPSLQRAVINAFDIRD*
Ga0126311_102859162	3300010045	Serpentine Soil	VLEEPIVAEPSGEDDTSARPAEMEDVLDIVWPETGLQTGCRVSSRPTNTLGEDDLVELEVDFVTLSLSPLEFIQLASFLRMSIDGLLERHPGLQRAVVNAFDIRD*
Ga0126311_102947612	3300010045	Serpentine Soil	MNDEPTVAETEESGGRTPLRLPAEMDDVLDMVWPETGLQTGCRVSSRPKNALGEDDLVELEVDFIKLSLSPLEFIQLASFLRMSIDGLLERHPVLQRAVVNAFDIRD*
Ga0126311_107863361	3300010045	Serpentine Soil	MTDEPIVAQPEEAADYTPPRPPAEMDDLLDMVWPETGLQTGCRVSSRPKGTLGEDDLVELEVDFVKLSLTPLEFIQLASFLRMSIDGLLERHPGLQRAVVNAFDIPD*
Ga0126306_101074073	3300010166	Serpentine Soil	MTDEPIVAEPEEGGGRTLARPPAEMDDVMDIVWPETGLQTGCRVSSRPKDTLGEDDVVELEIDFVTLSLSPLEFIQLASFLRMSVDGLLDRHPGLQRAVVNAFDIRD*
Ga0126306_102778023	3300010166	Serpentine Soil	TDGLIVAEPEEVGNSTPPRPAAEMDDVLDMVWPETGLQTGCRVSSRPQDTLGEDDLVELEIDFLKLSLTPLEFIQLASFLRMSVDGLLERHPGLQRAVVNAFDIRD*
Ga0126306_104810382	3300010166	Serpentine Soil	MTDEPIVAEPEQAGHSTPPRPAAEMDDVLDMVWPETGLQTGCRVSSRPKDTLGEDDLVELEVDFVKLSLTPLEFIQLASFLRMSIDGLLERHPGLQRAVVNAFDIRD*
Ga0126306_112548961	3300010166	Serpentine Soil	DGWTDGVGSASRSAAAGEHVLEEPIVAEPSGETDTSARPAEMEDVLDIVWPETGLQTGCRVSSRPRDTLGEDDLVELEIDFVKLTLSPLEFIQLASFLRMSIDELLERHPGLQRAVVNAFDIRD*
Ga0116240_109994502	3300010349	Anaerobic Digestor Sludge	MKHDPIAAEPRNPANRPAVRPAAPFVEILDMVWPETGLQTSSRVSQRPRDTLGEDDVVELEIDFVRLALTPLEFIQLASFLRMTVDGLLEQHPGLQRAVVNAFDIRD*
Ga0134128_111340152	3300010373	Terrestrial Soil	MTDDAIVVEPNEGATRPVRPPSPMDDMLDIVWPETGLQTGCRVSTRERDTLGEDDVVELEIDFVRLSLSPLEFIQLASFLRMSVDGLLERHPGLQRAVVNAFDIRGDGVIGS*
Ga0136621_11665582	3300012092	Polar Desert Sand	MQPGDQSTSQQPPVEPPAAPPRSEMIELLDMIWPETGLQTRVRAPRRPKDTLSEDDAIELQIDFLTLALTPLEFIQLASFLRMSIDDLLDQHPSLQRAVINAFDLRD*
Ga0150985_1103294202	3300012212	Avena Fatua Rhizosphere	MTDEPIIAEPDEGGGRTPLRPPAEMDDVLDMVWPETGLQTGCRVSSRPRNTLGEDDLIELEVDFVKLSLSPLEFIQLASFLRMSIDGLLERHPSLQRAVVNAFDIRD*
Ga0150985_1116043742	3300012212	Avena Fatua Rhizosphere	MTDEPIIAEPDEGGGRTPLRPPAEMDDVLDMVWPETGLQTGCRVSSRPRNTLGEDDLIELEVDFVKLSLSPLEFIQLASFLRMSIDGLLDRHPGLQRAVVNAFDIRD*
Ga0150985_1162680023	3300012212	Avena Fatua Rhizosphere	MTDEPIVAEPAAGSDQRPTRPLASLEDVLEMVWPETGLQTGCRVSRRPKDTLGEDDVIELAVDFVTLSLSPLEFIQLASFMRMSVDGLLDRHPGLQQAVVSAFDIRS*
Ga0150984_1082585713	3300012469	Avena Fatua Rhizosphere	MTDDPIVAEPENWASRRPTRPLTSLEDVLEMVWPETGLQTGCRVSRRPKDTLGEDDVIELAVDFVTLSLSPLEFIQLASFLRMSVDGLLDRHPCLQQAVVNAFDIRS*
Ga0136616_103075622	3300012679	Polar Desert Sand	MQPGDQSTSQQPPVEPPAAPPRSEMIELLDMIWPETGLQTRVRALRRPKDTLSEDDAIELQIDFLTLALTPLEFIQLASFLRMSIDDLLDQHPSLQRAVINAFDLRD*
Ga0136612_101410071	3300012680	Polar Desert Sand	SEAAMTDEPIIAEPEDHLLRPQPRPRAEMDEMLDMVWPETGLQTGARVSLREKDALGEDDVVELDIDFVKLSLSPLEFIQLASFLRMTVDGLLDRHPGLQRAVVNAFDIRE*
Ga0136612_105906751	3300012680	Polar Desert Sand	GKAIQEVDMTDEPIVAEPEDGGSRKPPRLPAEMDDVLDMVWPETGLQTGCRASLRPKDTLGEDDVVELDIDFVKLSLSPLEFIQLASFMRMSIDGLLDRHPGLQRAVVNAFDIPD*
Ga0136614_100449013	3300012684	Polar Desert Sand	MTEEPIVAEPETTGNRLPPRPAAALDDVLEMVWPETGLQTGCRVSARPKDTLGEDDVVELDIDFVKLSLSPLEFIQLASFLRMSIDGLLDRHPGLQRAVVNAFDIKD*
Ga0157301_104351641	3300012911	Soil	MTDEPIVAEPEEAGDYTPPRPPAKMDDLLDMVWPETGLQTGCRVSSRPRNTLGEDDLVELEVDFLRLSLSPLEFIQLASFLRMSIDGLLERHPGLQRAVVNAFDIRD*
Ga0170682_10946211	3300013024	Rock	MGTDQGSRDDAPEAVPAGRPPRAEPVDLLDMVWPETGLATSARVPRRPKDALGEDDTLELQIDFLTLSLTPLEFIQLASFLRMSIDGLLEQHPSLQRAVINAFDLRD*
Ga0075327_12247801	3300014272	Natural And Restored Wetlands	PPRPAADLDEVLEMVWPETGLQTGCRVSLRPKDALGEDDVVELDIDFVRLSLSPLEFIQLAAFLRLSVDGLLDRHPGLQRAVVNAFDIQG*
Ga0183260_100374732	3300017787	Polar Desert Sand	MQPGDQSTSQQPPVEPPAAPPRSEMIELLDMIWPETGLQTRVRAPRRPKDTLSEDDAIELQIDFLTLALTPLEFIQLASFLRMSIDDLLDQHPSLQRAVINAFDLRD
Ga0183260_101735482	3300017787	Polar Desert Sand	MTEEPIVAEPETTGNRLPPRPAAALDDVLEMVWPETGLQTGCRVSARPKDTLGEDDVVELDIDFVKLSLSPLEFIQLASFLRMSIDGLLDRHPGLQRAVVNAFDIKD
Ga0136617_100307595	3300017789	Polar Desert Sand	MTTEPRTGGGAAPDAGADPPPQAETFELHDMIWPETGLATSARVPRRPKDALGEEDTIELQIDFLTLSLSPLEFIQLASFLRMSIDGLLEQHPSLQRAVINAFDLRD
Ga0136617_114927181	3300017789	Polar Desert Sand	MTDEPIVAEPEGGGSRKPPRPATAMDDVLEMVWPETGLQTGCRVSQRAKDTLGEDDVVELDIDFVKLSFSPLEFIQLASFLRMSIDG
Ga0190265_113990041	3300018422	Soil	MTDEPIVAEPEVDESRTPPRPAAEMDYVIDMVWPETGLQTGCRVSARPKDTLGEDDVIELDVDFVKLSLSPLEFIQLASFLRMSVDGLLDRHPSLQRAVVNAFDIPD
Ga0190275_102199351	3300018432	Soil	MTDESIVAEPEQGGSRTPPRPAAEMDNVIDMVWPETGLQTGCRVSARAKDTLGEDDVIELDVDFVKLSLSPLEFIQLASFLRMSVDGLLDRHPSLQRAVVNAFDIPD
Ga0190275_130630461	3300018432	Soil	VPLRPVAGMDDVLDMVWPETGLQTGCRVSSRPRDALGEDDVVELDIDFVKLSLSPLEFIQLASFLRMSIDGLLERHPGLQRAVVNAFDIPD
Ga0190269_102504982	3300018465	Soil	MTDGPIVAEPEEAGDYTPPRPRAKMDDLLDMVWPETGLQTGCRVSSRPKDTLGEDDLVELEVDFVKLSLTPLEFIQLASFLRMSIDGLLERHPGLQRAVVNAFDIPD
Ga0190269_109126881	3300018465	Soil	MESEPIAAEPRKTASRPEVRPVAPFADILDMTWPETGLQTSSRVSQRPRDTLTEDDVVELEIDFVRLSLTPLEFIQLASFLRMTVDGLLEQHPGLQRAVVNAFDIRD
Ga0190268_110775302	3300018466	Soil	MIDEPIIAEPEEGGDYIPPRLPAEMDDVIDLVWPETGLQTGCRVSSRPKDALGEDDVIELDIDFVKLSLSPLEFIQLASFLRMSVDGLLERHPGLQRAVVNAFDIRD
Ga0193600_10903151	3300018877	Soil	MEPETIIAEPSEPAARREARPLAPFVDILEMTWPETGLQTSSRVSQRPRNTLGEDDVVELEIDFVRLALTPLEFIQLASFLRMTVDGLLEQHPGLQRAVVNAFDIRD
Ga0193598_11358651	3300018910	Soil	MVDEPTAAEPKASGDDTPPRSAAEKDDVLDMVWPETGLQTGCRVSSRPRDTLDEDDLVELDVDFVTLSLSPLEFIQLASFLRMSIDGL
Ga0193614_10633442	3300018933	Soil	MTGEQGASGEPAAAGSPPGRRSPPEMLELLDMIWPETGLQTAARVPRRPKDGLAEDDAIELQIDFLTLSLTPLEFIQLASFLRMSIDGLLDQHPGLQRAVINAFDIRD
Ga0193593_11345882	3300018939	Soil	EPIIAEPEELRSRTPPRPAAEMDDVLDMVWPETGLQMGCRVSSRPKDTLGEDDVVELDVDFVTLSLSPLEFIQLASFLRMSIDGLLEQHPSLQRAVVNAFDLRD
Ga0173481_108671631	3300019356	Soil	MTDEPIIAEPENGDHGPLRAPAEMDDVLDMVWPETGLQTGCRVSSRPKDRLGEDDLVELEVDFITLSLTPLEFIQLASFLRMSIDGLLERHPGLQRAVINAFDIRD
Ga0206356_106170541	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	RPPSPMDDMLDIVWPETGLQTGCRVSTRERDTLGEDDVVELEIDFVRLSLSPLEFIQLASFLRMSVDGLLERHPGLQRAVVNAFDIRG
Ga0207690_107928632	3300025932	Corn Rhizosphere	MTDDAIVVEPNEGATRPVRPPSPMDDMLDIVWPETGLQTGCRVSTRERDTLGEDDVVELEIDFVRLSLSPLEFIQLASFLRMSVDGLLERHPGLQRAVVNAFDIRGDGVI
Ga0207661_108456551	3300025944	Corn Rhizosphere	MTDDAIVVEPNEGATRQVRPPSPMDDMLDIVWPETGLQTGCRVSTRERDTLGEDDVVELEIDFVRLSLSPLEFIQLASFLRMSVDGLLERHPGLQRAVVNAFDIRG
Ga0209810_10478634	3300027773	Surface Soil	GRRCRGNRSRGQAMSEQPHRDRPEPATPAARDELTEVLDMIWPETGLQTTSRVTRRPKDQLSESDTVELQIDFLTLSLTPLEFIQLASFLRMSIDGLLDQHPSLQRAVVNAFDIRD
Ga0209591_101028523	3300027850	Freshwater	MTDEPIVAEPEDQNRRPQPRLRAEMDEMLDMVWPETGLQTGARVSLRAKDALGEDDVVELDIDFVKLSLSPLEFIQLASFLRMTVDGLLDRHPGLQRAVVNAFDIRE
Ga0209486_110866701	3300027886	Agricultural Soil	MTDEPIVAEPEEGGGHTSPRPPAEMDDVIDIVWPETGLQTGCRVSSRPKDTLGEDDVVELEIDFVTLSLSPLEFIQLASFLRMSVDGLLDRHPSLQRAVVNAFDIRD
Ga0209382_117925731	3300027909	Populus Rhizosphere	AGRECIPQDPGMICPVVFAAIHKEVGMTDEPIIAEPEDGVTRPPARPAADLDEVLEMVWPETGLQTGCRVSRRPIDALGEDDVVELDIDFVKLSLSPLEFIQFAAFLRLSVDGLLDRHPGLQRAVVNAFDIQG
Ga0247717_10456252	3300028006	Soil	MTDEPIVAEPEGGGHRPTRPPAEMDDVIDMVWPESGLQTGCRVSSRPKDTLGEDDVVELEVDFVTLSLSPLEFIQLASFLRMSIDGLLERHPGLQRAVVNAFDIPD
Ga0247825_108949571	3300028812	Soil	MTDEPIVAEPEDGEGRTPPRPAAELDEVLEMVWPETGLQTGCRVSRRPQDALGEDDVVELDIDFVKLSLSPLEFIQLAAVLRMSVDGLLDR
Ga0268240_101527351	3300030496	Soil	MADEPIVAEPGEAGNSTPPRPVAGMDDVLDMVWPETGLQTGCRVSARAKDTLGEDDLVELEIDFLKLSLTPLEFIQLASFLRMSVDGLLERHPGLQRAVVNAFDIRD
Ga0308189_101284982	3300031058	Soil	EPEEGGGHTPLRAPAEMDDVLDIVWPETGLQTGCRVSSRPKNTLGEDDLVELEVDFVRLSLSPLEFIQLASFLRMSIDGLLERHPDLQRAVVNAFDIRD
Ga0272433_1000072050	3300031450	Rock	MSDASATDREPPASRGGPPAKVELLDMIWPETGLQTSARVPHRPKDTLSEDDRIELQIDFLTLALSPLEFIQLASALRMSIDGLLEQHPALQKAVVNAFDLRD
Ga0272433_100126948	3300031450	Rock	MESRGEPANASNQAPEDGAGSPSSADTIELLDMVWPETGLQTRAQVPRRPKDTLSDNDTIDLQIDFLTLALTPLEFIQLASFLRMSIDGLLDHHPGLQRAVINAFDLRD
Ga0272427_100041174	3300031454	Rock	MSDAGTTDQNPPAPRGAPPAVVDLLDMIWPETGLETTARVPRRPKDTLSEDDRIELQIDFLTLALSPLEFIQLASALRMSIDGLLEQHPALQKAVVNAFDLRD
Ga0272427_11246922	3300031454	Rock	MSDASATDREPPASRGGPPAMVELLDMIWPETGLQTGARVPRRARDTLSEDDRIELQIDFLTLALSPLEFIQLASALRMSIDGLLEQHPAQQKAVVNAFDLRD
Ga0272434_12842452	3300031473	Rock	MPNQDQPAKPQPPDQQPAAPRDRSKTIELLDMIWPETGLQTRVRAPRRPKDTLSEDDAIELQIDFVTLSLTPLEFIQLASFLRMSIDDLLGQHPSLQRAVINAFDLRD
Ga0272434_13082531	3300031473	Rock	MSDAGTTDQDPPAPRGAPPAVVDLLDMIWPETGLETTARVPRRPKDTLSEDDRIELQIDFLTLALSPLEFIQLASALRMSIDGLLEQHPALQKAVVNAFDLRD
Ga0307408_1000776594	3300031548	Rhizosphere	MTDGPIVAEPEEAGGSAPPRPKAEIEDVLDMVWPETGLQTGCRVSLRPKDTLGEDDLVELEVDFVTLSLTPLEFIQLASFLRMSIDGLLERHPGLQRAVVNAFDIRD
Ga0307405_110918101	3300031731	Rhizosphere	MTDGPIVAEPEEAGGSAPPRPKAEIEDVLDMVWPETGLQTGCRVSLRPKDTLGEDDLIELEVDFVTLSLTPLEFIQLASFLRMSIDGLLERHPGLQRAVVNAFDIRD
Ga0307413_104450811	3300031824	Rhizosphere	MADEPIVAEPDGAGNSTPRPPAEMDDILEMVWPETGLQTGCRVSSRAKDTLGEDDLVELEIDFVTLSLTPLEFIQLASFLRMTVDGLLERHPGLQRAVVNAFDIRD
Ga0307410_105078952	3300031852	Rhizosphere	MTDEPIVAEPEEGGSHTPPRPPAEMDDVIDLVWPETGLQTGCRVSARAMDTLGEDDVVELEVDFVKLSLSPLEFIQLASFLRMSIDGLLERHPGLQRAVVNAFDIRD
Ga0307412_103035981	3300031911	Rhizosphere	MADEPIVAEPDGAGNSTPRPPAEMDDVLEMVWPETGLQTGCRVSSRAKDTLGEDDLVELEIDFVTLSLTPLEFIQLASFLRMTVDGLLERHPGLQRAVVNAFDIRD
Ga0307409_1006020461	3300031995	Rhizosphere	MTDGPIVAEPEEAGGSAPPRPKAEIEDVLDMVWPETGLQTGCRVSLRPKDTLGEDDLVELEVDFVTLSLTPLEFIQLASFLRMSID
Ga0308176_107880343	3300031996	Soil	MADEPIVAEPEEGGNSTPPRPAAEMDDVLDMVWPETGLQTRCRVSSRAKDTLGEDDLVKLEIDFVTLSLTPLEFIQLASFLRMSVDGLLERHPGLQRAVVNAFDIRD
Ga0307416_10000328210	3300032002	Rhizosphere	MTDGPIVAEPEEAGGSAPPRPKAEIEDVLDMVWPETGLQTGCRVSLRPKDTLGEDDLIELEVDFVTLSLTPLEFIQLASFLRMSIDGLLERHPGLQRAG
Ga0307411_121032051	3300032005	Rhizosphere	MADEPIVAEPDGAGNSTPRPPAEMDDILEMVWPETGLQTGCRVSSRAKDTLGEDDLVELEIDFVTLSLTPLEFIQLASFLRMTVDGLLERHPGLQRAVVNAF
Ga0307411_122030751	3300032005	Rhizosphere	AEPEEGGGPTPLRPPVEMDEVLDMVWPETGLQTGCRVSSRPKNTLGEDDLVELDVDFVTLSLSPLEFIQLASFLRMSIDGLLERHPGLQRAVVNAFDIRD
Ga0334917_126632_1_270	3300034391	Hypolithic Biocrust	MESEPIAAEPRKTVLRPEVRPVAPFADILDMTWPETGLQTSSRVSQRPRDTLSEDDVVELEIDFVRLSLTPLEFIQLASFLRMTVDGLLE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079738

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences