Metagenome Family F079746

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079746
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	70 residues
Representative Sequence	MNSRSAKRIDTTLGELIAAASEVAFEYSDNEKEAYRLARLALIEMLKKASHPFDVEEDIFNTVTRKTYLH
Number of Associated Samples	96
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.26 %
% of genes near scaffold ends (potentially truncated)	21.74 %
% of genes from short scaffolds (< 2000 bps)	75.65 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.217 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (11.304 % of family members)
Environment Ontology (ENVO)	Unclassified (23.478 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (37.391 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.92% β-sheet: 0.00% Coil/Unstructured: 54.08%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF00912	Transgly	29.57
PF14815	NUDIX_4	7.83
PF00578	AhpC-TSA	6.96
PF02954	HTH_8	4.35
PF00174	Oxidored_molyb	2.61
PF00892	EamA	1.74
PF13551	HTH_29	0.87
PF07690	MFS_1	0.87
PF00528	BPD_transp_1	0.87
PF00924	MS_channel	0.87
PF01740	STAS	0.87
PF10518	TAT_signal	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0744	Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase	Cell wall/membrane/envelope biogenesis [M]	29.57
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	29.57
COG5009	Membrane carboxypeptidase/penicillin-binding protein	Cell wall/membrane/envelope biogenesis [M]	29.57
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	2.61
COG3915	Uncharacterized conserved protein	Function unknown [S]	2.61
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.87
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.22 %
Unclassified	root	N/A	14.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.22 %
Unclassified	root	N/A	14.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.22 %
Unclassified	root	N/A	14.78 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	41.74 %
Unclassified	root	N/A	14.78 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	33.04 %
Unclassified	root	N/A	14.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.74 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	33.04 %
Unclassified	root	N/A	14.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.74 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	30.43 %
Unclassified	root	N/A	14.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.74 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	30.43 %
Unclassified	root	N/A	14.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16841221	All Organisms → cellular organisms → Bacteria	1460	Open in IMG/M
2124908045\|KansclcFeb2_ConsensusfromContig515832	All Organisms → cellular organisms → Bacteria	2111	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1006989	All Organisms → cellular organisms → Bacteria → Proteobacteria	1599	Open in IMG/M
3300000955\|JGI1027J12803_101273993	All Organisms → cellular organisms → Bacteria	1246	Open in IMG/M
3300002899\|JGIcombinedJ43975_10006726	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1869	Open in IMG/M
3300003995\|Ga0055438_10026655	All Organisms → cellular organisms → Bacteria	1359	Open in IMG/M
3300004013\|Ga0055465_10278547	Not Available	570	Open in IMG/M
3300004070\|Ga0055488_10003394	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2177	Open in IMG/M
3300004267\|Ga0066396_10009634	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
3300004633\|Ga0066395_10275793	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300005168\|Ga0066809_10071562	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	809	Open in IMG/M
3300005289\|Ga0065704_10552431	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	634	Open in IMG/M
3300005294\|Ga0065705_10658949	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	673	Open in IMG/M
3300005332\|Ga0066388_101835087	All Organisms → cellular organisms → Bacteria	1079	Open in IMG/M
3300005332\|Ga0066388_102986426	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	864	Open in IMG/M
3300005445\|Ga0070708_100436725	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300005536\|Ga0070697_100804742	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	832	Open in IMG/M
3300005713\|Ga0066905_101306920	Not Available	653	Open in IMG/M
3300005713\|Ga0066905_101759839	Not Available	571	Open in IMG/M
3300005764\|Ga0066903_108748350	Not Available	514	Open in IMG/M
3300005937\|Ga0081455_10001222	All Organisms → cellular organisms → Bacteria	32130	Open in IMG/M
3300005937\|Ga0081455_10068377	All Organisms → cellular organisms → Bacteria	2957	Open in IMG/M
3300005937\|Ga0081455_10180953	All Organisms → cellular organisms → Bacteria	1596	Open in IMG/M
3300005937\|Ga0081455_10329165	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1085	Open in IMG/M
3300005981\|Ga0081538_10095440	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1519	Open in IMG/M
3300006049\|Ga0075417_10232704	Not Available	879	Open in IMG/M
3300006845\|Ga0075421_100533268	All Organisms → cellular organisms → Bacteria	1389	Open in IMG/M
3300006845\|Ga0075421_101764041	Not Available	667	Open in IMG/M
3300006846\|Ga0075430_101424053	Not Available	570	Open in IMG/M
3300006852\|Ga0075433_10258538	All Organisms → cellular organisms → Bacteria	1544	Open in IMG/M
3300007004\|Ga0079218_10703230	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300009081\|Ga0105098_10073671	All Organisms → cellular organisms → Bacteria	1431	Open in IMG/M
3300009100\|Ga0075418_11692122	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	688	Open in IMG/M
3300009156\|Ga0111538_12905161	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300009157\|Ga0105092_10006650	All Organisms → cellular organisms → Bacteria	6091	Open in IMG/M
3300009157\|Ga0105092_10009393	All Organisms → cellular organisms → Bacteria → Proteobacteria	5123	Open in IMG/M
3300009157\|Ga0105092_10022097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3348	Open in IMG/M
3300009157\|Ga0105092_10124688	All Organisms → cellular organisms → Bacteria → Proteobacteria	1423	Open in IMG/M
3300009162\|Ga0075423_10140330	All Organisms → cellular organisms → Bacteria	2537	Open in IMG/M
3300009168\|Ga0105104_10307019	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300009168\|Ga0105104_10839103	Not Available	536	Open in IMG/M
3300009610\|Ga0105340_1238748	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300009792\|Ga0126374_10836286	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300009810\|Ga0105088_1033116	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	840	Open in IMG/M
3300009811\|Ga0105084_1004433	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1925	Open in IMG/M
3300009818\|Ga0105072_1007329	All Organisms → cellular organisms → Bacteria → Proteobacteria	1899	Open in IMG/M
3300009836\|Ga0105068_1000711	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4379	Open in IMG/M
3300009837\|Ga0105058_1005365	All Organisms → cellular organisms → Bacteria	2364	Open in IMG/M
3300010043\|Ga0126380_10291344	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300010043\|Ga0126380_10935102	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	724	Open in IMG/M
3300010043\|Ga0126380_11152592	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	665	Open in IMG/M
3300010046\|Ga0126384_11002473	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300010047\|Ga0126382_10359779	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300010362\|Ga0126377_10211769	All Organisms → cellular organisms → Bacteria	1864	Open in IMG/M
3300010362\|Ga0126377_12420055	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	601	Open in IMG/M
3300010366\|Ga0126379_10504969	All Organisms → cellular organisms → Bacteria	1281	Open in IMG/M
3300010366\|Ga0126379_12680243	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	595	Open in IMG/M
3300010376\|Ga0126381_102627573	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	720	Open in IMG/M
3300010398\|Ga0126383_12678978	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	581	Open in IMG/M
3300011422\|Ga0137425_1199380	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	502	Open in IMG/M
3300011439\|Ga0137432_1305738	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	508	Open in IMG/M
3300012159\|Ga0137344_1007729	All Organisms → cellular organisms → Bacteria	1548	Open in IMG/M
3300012160\|Ga0137349_1003639	All Organisms → cellular organisms → Bacteria	2012	Open in IMG/M
3300012208\|Ga0137376_10034342	All Organisms → cellular organisms → Bacteria	4053	Open in IMG/M
3300012209\|Ga0137379_10402990	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300012211\|Ga0137377_11049236	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	745	Open in IMG/M
3300012350\|Ga0137372_10099662	All Organisms → cellular organisms → Bacteria → Proteobacteria	2440	Open in IMG/M
3300012354\|Ga0137366_10413112	All Organisms → cellular organisms → Bacteria → Proteobacteria	982	Open in IMG/M
3300012359\|Ga0137385_10506749	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1021	Open in IMG/M
3300012360\|Ga0137375_11388748	Not Available	524	Open in IMG/M
3300012685\|Ga0137397_10300643	All Organisms → cellular organisms → Bacteria	1196	Open in IMG/M
3300012922\|Ga0137394_10052097	All Organisms → cellular organisms → Bacteria	3383	Open in IMG/M
3300012948\|Ga0126375_11369027	Not Available	598	Open in IMG/M
3300012960\|Ga0164301_10903350	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	685	Open in IMG/M
3300012989\|Ga0164305_11686739	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	568	Open in IMG/M
3300014271\|Ga0075326_1090477	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300014272\|Ga0075327_1160761	Not Available	704	Open in IMG/M
3300015245\|Ga0137409_11055345	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	651	Open in IMG/M
3300015371\|Ga0132258_10091193	All Organisms → cellular organisms → Bacteria	7147	Open in IMG/M
3300016294\|Ga0182041_10246580	All Organisms → cellular organisms → Bacteria	1451	Open in IMG/M
3300016357\|Ga0182032_11340904	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	618	Open in IMG/M
3300016371\|Ga0182034_10081382	All Organisms → cellular organisms → Bacteria	2258	Open in IMG/M
3300017944\|Ga0187786_10229707	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	723	Open in IMG/M
3300018051\|Ga0184620_10122633	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300018053\|Ga0184626_10000213	All Organisms → cellular organisms → Bacteria	15908	Open in IMG/M
3300018053\|Ga0184626_10068496	All Organisms → cellular organisms → Bacteria	1494	Open in IMG/M
3300018064\|Ga0187773_10307040	Not Available	888	Open in IMG/M
3300018072\|Ga0184635_10217058	Not Available	761	Open in IMG/M
3300019886\|Ga0193727_1013610	All Organisms → cellular organisms → Bacteria	3060	Open in IMG/M
3300021081\|Ga0210379_10030184	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2096	Open in IMG/M
3300021344\|Ga0193719_10270379	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300025549\|Ga0210094_1017891	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300025971\|Ga0210102_1015231	All Organisms → cellular organisms → Bacteria → Proteobacteria	1641	Open in IMG/M
3300027209\|Ga0209875_1001339	All Organisms → cellular organisms → Bacteria	3327	Open in IMG/M
3300027379\|Ga0209842_1001815	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4256	Open in IMG/M
3300027646\|Ga0209466_1002909	All Organisms → cellular organisms → Bacteria → Proteobacteria	3527	Open in IMG/M
3300027654\|Ga0209799_1000288	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	9114	Open in IMG/M
3300027722\|Ga0209819_10006377	All Organisms → cellular organisms → Bacteria	3776	Open in IMG/M
3300027722\|Ga0209819_10102388	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1000	Open in IMG/M
3300027722\|Ga0209819_10218621	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	663	Open in IMG/M
3300027722\|Ga0209819_10348580	Not Available	506	Open in IMG/M
3300027873\|Ga0209814_10205859	Not Available	850	Open in IMG/M
3300027873\|Ga0209814_10207500	Not Available	847	Open in IMG/M
3300027874\|Ga0209465_10013333	All Organisms → cellular organisms → Bacteria	3699	Open in IMG/M
3300030606\|Ga0299906_10034990	All Organisms → cellular organisms → Bacteria	4013	Open in IMG/M
3300031719\|Ga0306917_10474024	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300031720\|Ga0307469_10982853	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	787	Open in IMG/M
3300031740\|Ga0307468_100029119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2599	Open in IMG/M
3300031879\|Ga0306919_11256106	Not Available	562	Open in IMG/M
3300031890\|Ga0306925_11144985	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	783	Open in IMG/M
3300031908\|Ga0310900_11492798	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	570	Open in IMG/M
3300031910\|Ga0306923_10153084	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2633	Open in IMG/M
3300032174\|Ga0307470_11041894	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	654	Open in IMG/M
3300032261\|Ga0306920_100638228	All Organisms → cellular organisms → Bacteria	1574	Open in IMG/M
3300034176\|Ga0364931_0121475	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.22%
Host-Associated	Host-Associated	14.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.61%
Aquatic	Environmental → Aquatic	22.61%
Plants	Host-Associated → Plants	14.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.74%
Freshwater	Environmental → Aquatic → Freshwater	10.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.70%
Sediment	Environmental → Aquatic → Sediment	7.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.22%
Marine	Environmental → Aquatic → Marine	4.35%
Floodplain	Environmental → Terrestrial → Floodplain	0.87%
Roots	Host-Associated → Plants → Roots	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.74%
Sediment	Environmental → Aquatic → Freshwater → Sediment	10.43%
Loam	Environmental → Terrestrial → Soil → Loam	10.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.83%
Sand	Environmental → Terrestrial → Soil → Sand	6.09%
Wetlands	Environmental → Aquatic → Marine → Wetlands	4.35%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.48%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.74%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.87%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.96%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	10.43%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.83%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	6.09%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	4.35%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.87%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.87%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.30%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	9.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.96%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	6.09%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	4.35%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.35%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.48%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	3.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.74%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.74%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.74%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.87%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.87%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300003995	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004070	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D2	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011422	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT640_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300012159	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT500_2	Environmental	Open in IMG/M
3300012160	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT630_2	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014271	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2	Environmental	Open in IMG/M
3300014272	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300025549	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025971	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300027209	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_00193210	2088090014	Soil	MEKGSVKTMNSRSAKRIDTTLGELIAAASEVAFEYSENDREAYRLARLALIEMLKKASHSMDVDEEMFNTMTRKNYLH
KansclcFeb2_13594630	2124908045	Soil	MNSRSAKRIDTTLGELIAAASEVAFEYSDNEKEAYRLARLALIEMLKKASHPFDVEEELFSSMTRKTYLH
AP72_2010_repI_A100DRAFT_10069893	3300000837	Forest Soil	MNSRSVKRIDTTLGELIAAASEVAFEYSDNERDAYLLARLALIEMLKKASHPFYVEDDIFNTATRNTYLH*
JGI1027J12803_1012739933	3300000955	Soil	MEKYSTRKINTTLGELIAAASEVAFEYSDNDKEAYRLARLALVEMLKKASHPLDLDEESVSGITKRLYLH*
JGIcombinedJ43975_100067263	3300002899	Soil	MNSRSAKRIDTTLGELIAAASEVAFEYSDNEKEAYRLARLALIEMLKKASHPFDVEEEFFSSMTRKTYLN*
Ga0055438_100266551	3300003995	Natural And Restored Wetlands	MNGQGAKRIDTTLGELIAAASEVAFEYSDNDKDAYRLARLALIEMLKKASYPIDLEAEFEFSPRRNHYLH*
Ga0055465_102785472	3300004013	Natural And Restored Wetlands	MKSQHGNRIDTTLGELIAAASEVAFEYSANDKDAYRLARLALIELLKKATHPIDVQDEFLDT
Ga0055488_100033943	3300004070	Natural And Restored Wetlands	MKSQHGNRIDTTLGELIAAASEVAFEYSANDKDAYRLARLALIELLKKATRPIDVQDEFSDTVTRKTYLH*
Ga0066396_100096341	3300004267	Tropical Forest Soil	MNSRSVKRIDTTLGELIAAASEVAFEYSDNERDAYLLARLALIEMLKKASHPFYVEDDIFNTATGNTYLH*
Ga0066395_102757931	3300004633	Tropical Forest Soil	MNSRSVKRIDTTLGELIAAASEVAFEYSDNERDAYLLARLALIEMLKKASHPLYVEDDIFNTATRNTYLH*
Ga0066809_100715621	3300005168	Soil	KTMNSRSAKRIDTTLGELIAAASEVAFEYSENDREAYRLARLALIEMLKKASHSMDVDEEMFNTMTRKNYLH*
Ga0065704_105524311	3300005289	Switchgrass Rhizosphere	MNSRSAKRIDTTLGELIAAASEVAFEYSDNEREAYGLARLALIEMLKKASHPFDVEGDIFNAVTRKTYLH*
Ga0065705_106589492	3300005294	Switchgrass Rhizosphere	MNNRSAKRIDTTLGELIAAASEVAFEYSDNEKEAYRLARLALIEMLKRSSHPFDLEEDIFNAVTKKTYLH*
Ga0066388_1018350873	3300005332	Tropical Forest Soil	LGELIAAASEVAFEYSDNESEAYRLARLALIEMLKKASHPFDVEDDILNTATKKTYLH*
Ga0066388_1029864262	3300005332	Tropical Forest Soil	MNSRSVNRIDTTLGELIAAASEVAFEYSDNERDAYLLARLALIEMLKKASHPFCVEDDIFNTATRKTYLH*
Ga0070708_1004367252	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MEKYSTRKINTTLGELIAAASEVAFEYSDNDKEAYRLARLALVEMLKKASHPLDLDEESVSGITKRPYLH*
Ga0070697_1008047422	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MEKYSTRKINTTLGELIAAASEVAFEYSDNDKEAYRLARLALVEMLKKASHPLDLDEESVSGITKKPYLH*
Ga0066905_1013069201	3300005713	Tropical Forest Soil	MNSRSAKRIDTTLGELIAAASEVAFEYSDNESDAYRLARLALIEMLKKASHPLYVEDDIFNTATKKTYLH*
Ga0066905_1017598392	3300005713	Tropical Forest Soil	MKSRSAKRIDTTLGELIAAASEVAFEYSDNESDAYRLARLALIEMLKKASHPFDVEEDIFNTATKKTYLH*
Ga0066903_1087483501	3300005764	Tropical Forest Soil	IDTTLGELIAAASEVAFEYSDNERDAYLLARLALIEMLKKASHPLYVEDDILNTATRNTYLN*
Ga0081455_100012226	3300005937	Tabebuia Heterophylla Rhizosphere	MNSRSVKRIDTTLGELIAAASEVAFEYSDNERDAYLLARLALIEMLKKASHPFYVEDDIFNTATRKTYLH*
Ga0081455_100683772	3300005937	Tabebuia Heterophylla Rhizosphere	MENQNTKRFETTLGELIAAASEVAFEYSDNEQDAYRLARLALIEMLKKASRPVDLEEEFTSLMTRKTYLH*
Ga0081455_101809532	3300005937	Tabebuia Heterophylla Rhizosphere	MNSRSAKRIDTPLGELIAAASEVAFEYSDNEREAYGLARLALIEMLKKASHPFDVEEDIFNAVTRKTYLH*
Ga0081455_103291652	3300005937	Tabebuia Heterophylla Rhizosphere	MENQNTKRFDTTLGELIAAASEVAFEYSDNEKDAYRLARLAIVEMLKKASRPLELEEEFMSLTTKKSYLH*
Ga0081538_100954402	3300005981	Tabebuia Heterophylla Rhizosphere	MDNQNTKRFDTTLGELIAAASEVAFEYSDNDQDAYRLARLAIVEMLKKASCPVAPEEEFMSLMTKKSYLH*
Ga0075417_102327042	3300006049	Populus Rhizosphere	MNSRSAKRIDTTLGELIAAASEVAFEYSDNEKEAYRLARLALIEMLKKASHPFDLEEDIFNAVTRKTYLH*
Ga0075421_1005332681	3300006845	Populus Rhizosphere	VKTMNSRSAKRIDTTLGELIAAASEVAFEYSDNEKEAYRLARLALIEMLKKASHPFDVEEEFFSSMTRKTYLN*
Ga0075421_1017640411	3300006845	Populus Rhizosphere	LSAYPKKGTIKTMESHNSRRIDTTLGELIAAASEVAFEYSDNDQDAYRLARLALIEMLKKASRPIDFEDELLGNVTRKTYLH*
Ga0075430_1014240532	3300006846	Populus Rhizosphere	PEKGSVKTMNSRSAKRIDTTLGELIAAASEVAFEYSDNEKEAYRLARLALIEMLKKASHPFDLEEDIFNAVTRKTYLH*
Ga0075433_102585383	3300006852	Populus Rhizosphere	MNSRSAKRIDTTLGELIAAASEVAFEYSENDREAYRLARLALIEMLKKASHSMDVDEEMFNTMTRKNYLH*
Ga0079218_107032302	3300007004	Agricultural Soil	MKNGNPKIIDTTLGDLIAAASEVAFEYSDNDKEGYRLARLALIEMLRKSSYSIDLNEELTSVTTRKTYLH*
Ga0105098_100736712	3300009081	Freshwater Sediment	MENQNTKKLDTTLGELIAAASEVAFEYSDNDQDAYRLARLALIEMLRKASRPVELEEEVVSLMTRKSYLH*
Ga0075418_116921221	3300009100	Populus Rhizosphere	MEKGSVKTMNSRSAKRIDTTLGELIAAASEVAFEYSENDREAYRLARLALIEMLKKASHSMDVDEEMFNTMTRKNYLH*
Ga0111538_129051611	3300009156	Populus Rhizosphere	MNSRSAKRIDTTLGELIAAASEVAFEYSDNEKEAYRLARLALIEMLKKASHPFEVEDEEMLNTMTTRKGYLH*
Ga0105092_100066504	3300009157	Freshwater Sediment	MERQGTKKIHTTLGELIAAASEVAFEYSDNDREAYRLARLALIEMLKKASHPIDLDQEFDKPTIRNHYLH*
Ga0105092_100093934	3300009157	Freshwater Sediment	MENQNTKKLDTTLGDLIAAASEVAFEYSDNDQDAYRLARLALVEMLRKASRPVEIEEEFARLISRKSYLH*
Ga0105092_100220973	3300009157	Freshwater Sediment	MNSRSARRIDTTLGELIAAASEVAFEYSDNEREAYGLARLALIEMLKKASHPFDVEEDIFNAVTRKTYLH*
Ga0105092_101246882	3300009157	Freshwater Sediment	MENQNTKRFDTTLGELIAAASEVAFEYSDNEQDAYRLARLALIEMLRKASRPVELEEEFTSLMTRKTYLH*
Ga0075423_101403302	3300009162	Populus Rhizosphere	MEKGSVKTMNSRSAKRIDTTLGELIAAASEVAFEYSENDREAYRLARLALIEMLKKASHSIDVDEEMFNTMTRKNYLH*
Ga0105104_103070191	3300009168	Freshwater Sediment	MNSHNAKRIDTTLGELIAAASEVAFEYSDNEKEAYRLARLALIEMLKKASHPIDVEEEFFSPITRKTYLH*
Ga0105104_108391031	3300009168	Freshwater Sediment	TTLGELIAAASEVAFEYSDNEQDAYRLARLALIEMLRKTSRPVDLEEEFTSLMTRKTYLH
Ga0105340_12387481	3300009610	Soil	MNTRSAKRIDTTLGELIAAASEVAFEYSDNEKEAYRLARLALIEMLKKASHLVDLEEEFSGAMTRKTYLH*
Ga0126374_108362862	3300009792	Tropical Forest Soil	MNSRSAKRIDTTLGELIAAASEVAFEYSDNERDAYLLARLALIEMLKKASHPLYVEDDILNTATRNTYLN*
Ga0105088_10331161	3300009810	Groundwater Sand	MNSHNAKRIDTTLGELIAAASEVAFEYSDNEREAYRLARLALIEMLKKASHPIDLEQEFGIPTRNHYLH*
Ga0105084_10044333	3300009811	Groundwater Sand	MNSRSAKRIDTTLGELIAAASEVAFEYSDNEREAYRLARLALIEMLKKASHPIDLEQEFGIPTRNHYLH*
Ga0105072_10073291	3300009818	Groundwater Sand	NLEKGSVKTMNSRSAKRIDTTLGELIAAASEVAFEYSDNEREAYRLARLALIEMLKKASHPIDLEQEFGIPTRNYYLH*
Ga0105068_10007115	3300009836	Groundwater Sand	MNSRSAKRIDTTLGELIAAASEVAFEYSDNEREAYRLARLALIEMLKKASHPIDLEQEFGIPTRNYYLH*
Ga0105058_10053651	3300009837	Groundwater Sand	MNSRSAKRIDTTLGELIAAASEVAFEYSDNEREAYRLARLALIEMLKKASHPVDVEEEFLSATTKKTYLH*
Ga0126380_102913442	3300010043	Tropical Forest Soil	MNSRSAKRIDTTLGELIAAASEVAFEYSDNERDAYLLARLALIEMLKKASHPLYVEDDIFNTATKNTYLH*
Ga0126380_109351021	3300010043	Tropical Forest Soil	MNSRSAKRIDTTLGELIAAASEVAFEYSDNEGDAYRLARLALIEMLKKASHPFCVEDDIFNTATRKTYLH*
Ga0126380_111525921	3300010043	Tropical Forest Soil	SAKRIDTTLGELIAAASEVAFEYSDNESEAYRLARLALIEMLKKASHPFDVEDDIFNTATKKTYLH*
Ga0126384_110024732	3300010046	Tropical Forest Soil	MNSRSVKRIDTTLGELIAAASEVAFEYSDNERDAYFLARLALIEMLKKASHPFYVEDDIFNTATRNTYLH*
Ga0126382_103597792	3300010047	Tropical Forest Soil	MNSRSARRIDTTLGELIAAASEVAFEYSDNEGEAYRLARLALIEMLKKASHPFDVEEDIFNTATKKTYLH*
Ga0126377_102117693	3300010362	Tropical Forest Soil	MNSRSAKRIDTTLGELIAAASEVAFEYSDNESDAYRLARLALIEMLKKASHPFDVEEDIF
Ga0126377_124200551	3300010362	Tropical Forest Soil	GFAKTMNSRSVKRIDTTLGELIAAASEVAFEYSDNERDAYLLARLALIEMLKKASHPLYVEDDIFNTAPRNTYLH*
Ga0126379_105049693	3300010366	Tropical Forest Soil	MNSRSAKRIDTTLGELIAAASEVAFEYSDNESGAYRLARFALIEMLKKASHPFDLEEDILTLTRK
Ga0126379_126802431	3300010366	Tropical Forest Soil	MNSRSVKRIDTTLGELIAAASEVAFEYSDNERDAYLLARLALIEMLKKASHPFYVED
Ga0126381_1026275731	3300010376	Tropical Forest Soil	MNSRSVKRIDTTLGELIAAASEVAFEYSDNERDAYLLARLALIEMLKKASHPLYVEDDILNTATRNTYLN*
Ga0126383_126789781	3300010398	Tropical Forest Soil	IDTTLGELIAAASEVAFEYSDNERDAYLLARLALIEMLKKASHPLYVEDDIFNTATRNTYLH*
Ga0137425_11993802	3300011422	Soil	MESHNSRRIDTTLGELIAAASEVAFEYSDNDKDAYRLARLALIEMLKKASRPIDFEDEFLSTVTRKTYLH*
Ga0137432_13057381	3300011439	Soil	MESHNSKRIDTTLGELIAAASEVAFEYSDNDQEAYRLARLALIEMLKKASRPIDFEDEFLGNVT
Ga0137344_10077292	3300012159	Soil	MNTRSAKRIDTTLGELIAAASEVAFEYSDNEKEAYRLARLALIEMLKKASHPVDLEEEFSVAMTRKTYLH*
Ga0137349_10036391	3300012160	Soil	MNTRSAKRIDTTLGELIAAASEVAFEYSDNEKEAYRLARLALIEMLKKASHPVDLEEEFSGAMTRKTYLH*
Ga0137376_100343424	3300012208	Vadose Zone Soil	MNSRSAKRIDTTLGELIAAASEVAFEYSDNEKEAYRLARLALIEMLKKASHPFDVEEEFFSSMRRKTYLH*
Ga0137379_104029902	3300012209	Vadose Zone Soil	MNSRSAKRIDTTLGELIAAASEVAFEYSDNEKEAYRLARLALIEMLKKASHPFDVEEDIFNAVTRKTYLH*
Ga0137377_110492361	3300012211	Vadose Zone Soil	MNSRSAKRIDTTLGELIAAASEVAFEYSDNEREAYRLARLALIEMLKKASHPFDVEEEFFSSMTRKTYLN*
Ga0137372_100996625	3300012350	Vadose Zone Soil	MNSRSAKRIDTTLGELIAAASEVAFEYSDNEKEAYRLARLALIEMLKKASHPFDVEEDIFNTVTRKTYLH*
Ga0137366_104131121	3300012354	Vadose Zone Soil	IDTTLGELIAAASEVAFEYSDNEKKAYRLARFALIEMLKKASHPVDVEEEFSGAVTKKTYLH*
Ga0137385_105067492	3300012359	Vadose Zone Soil	MNSRSAKRIDTTLGELIAAASEVAFEYSDNEKEAYRLARLALIEMLKKASYPFDVEEDIFNTVTRKTYLH*
Ga0137375_113887481	3300012360	Vadose Zone Soil	MNSRSAKRIDTTLGELIAAASEVAFEYSDNEKEAYRLARLALIEMLKKASHPVDVEEDIFNAVTRKTYLH*
Ga0137397_103006432	3300012685	Vadose Zone Soil	MEKGSVKTMNSRSAKRIDTTLGELIAAASEVAFEYSENDREAYRLARLALIEMLKKASHPMDVDEEMLNTMTRKNYLH*
Ga0137394_100520972	3300012922	Vadose Zone Soil	MNSHNAKRIDTTLGELIAAASEVAFEYSDNEREAYRLARLALIEMLKKASHPVDVEEEFLSATTKKTYLH*
Ga0126375_113690272	3300012948	Tropical Forest Soil	MNSRSARRIDTTLGELIAAASEVAFEYSDNEGDAYRLARLALIEMLKKASHPFDMEEDIFNTATKKTYLH*
Ga0164301_109033502	3300012960	Soil	MERPATRILNTTLGELIAAASEVAFEYSENDREAYRLARLALIEMLKKASHPMDVDEEMLNTMTRKNYLH*
Ga0164305_116867392	3300012989	Soil	MEKGSVKTMNIRSAKRIDTTLGELIAAASEVAFEYSENDREAYRLARLALIEMLKKASHSMDVDEEMFNTMT
Ga0075326_10904772	3300014271	Natural And Restored Wetlands	MKSQHTNRIDTTLGELIAAASEVAFEYSENDKDAYRLARLALIEMLKKATRPIDVEDEFLDTVTRKTYLH*
Ga0075327_11607611	3300014272	Natural And Restored Wetlands	MKSQHGNRIDTTLGELIAAASEVAFEYSKNDQDAYRLARLALIELLKKATRPIDVQDEFSDTVTRKIYLH*
Ga0137409_110553451	3300015245	Vadose Zone Soil	MEKGSVKTMNSRRAKRIDTTLGELIAAASEVAFEYSENDREAYRLARLALIEMLKKASHPMDVDEEMLNTMTRKNYLH*
Ga0132258_100911931	3300015371	Arabidopsis Rhizosphere	MNSRSAKRIDTTLGELIAAASEVAFEYSDNEREAYRLARLALIEMLKKASHPFEVEEEEILSTMTRKGYLH*
Ga0182041_102465801	3300016294	Soil	MEKYSTRRINTTLGELIAAASEVAFEYSDNDKEAYKLARLALVEILRRASRSLDLDEESLSGITRKTYLH
Ga0182032_113409041	3300016357	Soil	MEKYSTRRINTTLGELIAAASEVAFEYSENDKEAYRLAGLALVEILRRASHPLDLDEESLSGITRKTYLH
Ga0182034_100813823	3300016371	Soil	MEKYSTRRINTTLGELIAAASEVAFEYSDNDNEAYRLARLALVEMLKRASHPLDLDDESLSGITRKTYLH
Ga0187786_102297072	3300017944	Tropical Peatland	MNSRSAKRIDTTLGELIAAASEVAFEYSNNDKDAYQLARLALIEMLKKASHPIDLEADFDFSPGRNYYLH
Ga0184620_101226331	3300018051	Groundwater Sediment	LEKGSVKTMNSRSAKRIDTTLGELIAAASEVAFEYSENEREAYRLARLALIEMLKKASHPVDLEQEFDIPTRRNHYLH
Ga0184626_100002133	3300018053	Groundwater Sediment	MNSRSAKRIDTTLGELIAAASEVAFEYSDNEREAYRLARLALIEMLKKASHPVDVEEDIFNAVTRKTHLH
Ga0184626_100684963	3300018053	Groundwater Sediment	MNSRSAKRIDTTLGELIAAASEVAFEYSENEREAYRLARLALIEMLKKASHPVDLEQEFDIPTRKNHYLH
Ga0187773_103070402	3300018064	Tropical Peatland	MEKRATKKIDTTLGELIAAASEVAFECSDNDKEAYRLARLALIEMLKKASYPIDLDEDCLSIITRKTYLH
Ga0184635_102170582	3300018072	Groundwater Sediment	MNTRSAKRIDTTLGELIAAASEVAFEYSDNEKEAYRLARLALIEMLKKASHPVDLEEEFSVAMTRKTYLH
Ga0193727_10136102	3300019886	Soil	MNSRSAKRIDTTLGELIAAASEVAFEYSENDREAYRLARLALIEMLKKASHPVDLEQEFDIPTRKNHYLH
Ga0210379_100301842	3300021081	Groundwater Sediment	MNTRSAKRIDTTLGELIAAASEVAFEYSDNEKEAYRLARLALIEMLKKASHPVDLEEEFSGAMTRKTYLH
Ga0193719_102703791	3300021344	Soil	SANLEKGSVKTMNSRSAKRIDTTLGELIAAASEVAFEYSENEREAYRLARLALIEMLKKASHPVDLEQEFDIPTRKNHYLH
Ga0210094_10178911	3300025549	Natural And Restored Wetlands	MNGQGAKRIDTTLGELIAAASEVAFEYSDNDKDAYRLARLALIEMLKKASYPIDLEAEFEFSPRRNHYLH
Ga0210102_10152312	3300025971	Natural And Restored Wetlands	MKSQHANRIDTTLGELIAAASEVAFEYSENDKDAYRLARLALIEMLKKATRPIDVQDEFLDTVTRKTYLN
Ga0209875_10013393	3300027209	Groundwater Sand	MNSRSAKRIDTTLGELIAAASEVAFEYSDNEREAYRLARLALIEMLKKASHPVDLEQEFDIPKGRNHYLH
Ga0209842_10018151	3300027379	Groundwater Sand	MNSRSAKRIDTTLGELIAAASEVAFEYSDNEREAYRLARLALIEMLKKASHPIDLEQEFGIPTRNHYLH
Ga0209466_10029093	3300027646	Tropical Forest Soil	MNSRNVKRIDTTLGELIAAASEVAFEYSDNERDAYLLARLALIEMLKKASHPLYVEDDIFNTATRNTYLH
Ga0209799_10002883	3300027654	Tropical Forest Soil	MNSRSVKRIDTTLGELIAAASEVAFEYSDNERDAYLLARLALIEMLKKASHPLYVEDDIFNTATRNTYLH
Ga0209819_100063774	3300027722	Freshwater Sediment	MERQGTKKIHTTLGELIAAASEVAFEYSDNDREAYRLARLALIEMLKKASHPIDLDQEFDKPTIRNHYLH
Ga0209819_101023881	3300027722	Freshwater Sediment	MENQNTKKLDTTLGELIAAASEVAFEYSDNDQDAYRLARLALIEMLRKASRPVELEEEVVSLMTRKSYLH
Ga0209819_102186211	3300027722	Freshwater Sediment	MNSRSAKRIDTTLGELIAAASEVAFEYSDNEREAYGLARLALIEMLKKASHPFDVEEDIFFNAVTRKTYLH
Ga0209819_103485801	3300027722	Freshwater Sediment	MENQNTKRFDTTLGELIAAASEVAFEYSDNEQDAYRLARLALIEMLRKASRPVELEEEFTSLMTRKTYLH
Ga0209814_102058592	3300027873	Populus Rhizosphere	MNSRSAKRIDTTLGELIAAASEVAFEYSDNEKEAYRLARLALIEMLKKASHPFDLEEDIFNAVTRKTYLH
Ga0209814_102075002	3300027873	Populus Rhizosphere	MNSRSAKRIDTTLGELIAAASEVAFEYSDNEKEAYRLARLALIEMLKKASHPFDVEEEFFSSMTRKTYLN
Ga0209465_100133333	3300027874	Tropical Forest Soil	MNSRSVKRIDTTLGELIAAASEVAFEYSDNERDAYLLARLALIEMLKKASHPFYVEDDIFNTATRNTYLH
Ga0299906_100349905	3300030606	Soil	MQNQNTKKLNTALGELIAAAGEVAFEHSNSDQEAYRLARIALIEILKRASYPGEFDEEFDGLKKPRYFH
Ga0306917_104740241	3300031719	Soil	MEKYSTRRINTTLGELIAAASEVAFEYSDNDKEAYRLARLALVEILRRASRSLDLDEESLSGITRKTYLH
Ga0307469_109828531	3300031720	Hardwood Forest Soil	MNSRSAKRIDTTLGELIAAASEVAFEYSDNEREAYGLARLALIEMLKKASHPFDVEGDIFNAVTRKTYLH
Ga0307468_1000291194	3300031740	Hardwood Forest Soil	MNSRSAKRIDTTLGELIAAASEVAFEYSENDREAYRLARLALIEMLKKASHSMDVDEEMFNTMTRKNYLH
Ga0306919_112561062	3300031879	Soil	SEPPEGAVKTMEKYSTRRINTTLGELIAAASEVAFEYSDNDNEAYRLARLALVEMLKRASHPLDLDEESLSGITRKTYLH
Ga0306925_111449851	3300031890	Soil	TTLGELIAAASEVAFEYSDNDKEAYKLARLALVEILRRASRSLDLDEESLSGITRKTYLH
Ga0310900_114927981	3300031908	Soil	MNSRSAKRIDTTLGELIAAASEVAFEYSDNEREAYRLARLALIEMLKTASHPFEVEEEEMLNSMTRKGYLQ
Ga0306923_101530844	3300031910	Soil	MEKYSTRRINTTLGELIAAASEVAFEYSDNDKEAYRLAGLALVEILRRASHPLDLDEESLSGITRKTYLH
Ga0307470_110418942	3300032174	Hardwood Forest Soil	DRQKGAVKTMEKYSTRKINTTLGELIAAASEVAFEYSDNDKEAYRLARLALVEMLKKASHPLDLDEESVSGITKRPYLH
Ga0306920_1006382283	3300032261	Soil	MEKYSTRRINTTLGELIAAASEVAFEYSDNDKEAYRLARLALVEMLKRASHPLDLDEESLSGTTKKTYLH
Ga0364931_0121475_57_269	3300034176	Sediment	MNSRSAKRIDTTLGELIAAASEVAFEYSDNEKEAYRLARLALIEMLKKASHPVDLEEEFSGAMTRKTYLH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079746

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences