Metagenome / Metatranscriptome Family F079793

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079793
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	59 residues
Representative Sequence	MAIQIEIVLIAGVVAIGLIVLGRAIVTGLAISRRPSHHLAQQTGTSPVPPAIDVRPPE
Number of Associated Samples	83
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	87.83 %
% of genes near scaffold ends (potentially truncated)	24.35 %
% of genes from short scaffolds (< 2000 bps)	86.96 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.174 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.391 % of family members)
Environment Ontology (ENVO)	Unclassified (26.957 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.522 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.35% β-sheet: 0.00% Coil/Unstructured: 54.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF06224	HTH_42	3.48
PF13561	adh_short_C2	2.61
PF02668	TauD	1.74
PF00239	Resolvase	1.74
PF04828	GFA	1.74
PF01503	PRA-PH	1.74
PF03734	YkuD	1.74
PF12200	DUF3597	0.87
PF17200	sCache_2	0.87
PF04993	TfoX_N	0.87
PF00496	SBP_bac_5	0.87
PF14294	DUF4372	0.87
PF00155	Aminotran_1_2	0.87
PF00903	Glyoxalase	0.87
PF00152	tRNA-synt_2	0.87
PF02900	LigB	0.87
PF07045	DUF1330	0.87
PF13518	HTH_28	0.87
PF01315	Ald_Xan_dh_C	0.87
PF00211	Guanylate_cyc	0.87
PF13659	Obsolete Pfam Family	0.87
PF00005	ABC_tran	0.87
PF02780	Transketolase_C	0.87
PF01850	PIN	0.87
PF00144	Beta-lactamase	0.87
PF00248	Aldo_ket_red	0.87
PF10049	DUF2283	0.87
PF02776	TPP_enzyme_N	0.87
PF10282	Lactonase	0.87
PF00694	Aconitase_C	0.87
PF04116	FA_hydroxylase	0.87
PF07355	GRDB	0.87
PF01545	Cation_efflux	0.87
PF01968	Hydantoinase_A	0.87
PF12973	Cupin_7	0.87
PF02653	BPD_transp_2	0.87
PF13473	Cupredoxin_1	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG3214	DNA glycosylase YcaQ, repair of DNA interstrand crosslinks	Replication, recombination and repair [L]	3.48
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	1.74
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.74
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.74
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	1.74
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	1.74
COG3791	Uncharacterized conserved protein	Function unknown [S]	1.74
COG0017	Aspartyl/asparaginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.87
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.87
COG0173	Aspartyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.87
COG1190	Lysyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	0.87
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.87
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.87
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.87
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.87
COG2269	Elongation factor P--beta-lysine ligase (EF-P beta-lysylation pathway)	Translation, ribosomal structure and biogenesis [J]	0.87
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.87
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	0.87
COG3070	Transcriptional regulator of competence genes, TfoX/Sxy family	Transcription [K]	0.87
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.87
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.17 %
Unclassified	root	N/A	47.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.17 %
Unclassified	root	N/A	47.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.17 %
Unclassified	root	N/A	47.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	36.52 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.74 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	29.57 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.74 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.87 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.09 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	6.09 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.74 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.87 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.09 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.87 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.87 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.87 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.87 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.87 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.09 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.87 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.87 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.87 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.87 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.87 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.09 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.87 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.87 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.87 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.87 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.87 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.09 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.87 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.87 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.87 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.87 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.87 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.09 %
Streptomyces sp. Tu6071	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu6071	0.87 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.87 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.87 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.87 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.87 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352024\|deeps__Contig_174530	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M
3300000789\|JGI1027J11758_12924266	Not Available	607	Open in IMG/M
3300002568\|C688J35102_120512045	All Organisms → cellular organisms → Bacteria → Proteobacteria	1132	Open in IMG/M
3300002568\|C688J35102_120572402	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1194	Open in IMG/M
3300003505\|JGIcombinedJ51221_10370308	Not Available	582	Open in IMG/M
3300004153\|Ga0063455_101440564	Not Available	534	Open in IMG/M
3300005330\|Ga0070690_100959151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	672	Open in IMG/M
3300005332\|Ga0066388_107037981	Not Available	566	Open in IMG/M
3300005335\|Ga0070666_10059270	All Organisms → cellular organisms → Bacteria → Proteobacteria	2589	Open in IMG/M
3300005336\|Ga0070680_101035940	Not Available	709	Open in IMG/M
3300005336\|Ga0070680_101388238	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300005344\|Ga0070661_101285819	Not Available	613	Open in IMG/M
3300005436\|Ga0070713_102121429	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300005529\|Ga0070741_11149164	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300005532\|Ga0070739_10001802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	30751	Open in IMG/M
3300005764\|Ga0066903_100298737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2545	Open in IMG/M
3300005764\|Ga0066903_100313118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2498	Open in IMG/M
3300005764\|Ga0066903_100446511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2158	Open in IMG/M
3300005764\|Ga0066903_100551365	All Organisms → cellular organisms → Bacteria	1977	Open in IMG/M
3300005764\|Ga0066903_100597366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1911	Open in IMG/M
3300005764\|Ga0066903_104849504	Not Available	715	Open in IMG/M
3300005764\|Ga0066903_108961620	Not Available	507	Open in IMG/M
3300006032\|Ga0066696_10198416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1279	Open in IMG/M
3300006804\|Ga0079221_10347841	Not Available	893	Open in IMG/M
3300006804\|Ga0079221_11165605	Not Available	595	Open in IMG/M
3300007982\|Ga0102924_1066910	All Organisms → cellular organisms → Bacteria	1978	Open in IMG/M
3300009162\|Ga0075423_12046220	Not Available	620	Open in IMG/M
3300010044\|Ga0126310_11739861	Not Available	519	Open in IMG/M
3300010048\|Ga0126373_10413186	Not Available	1377	Open in IMG/M
3300010048\|Ga0126373_12533571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	572	Open in IMG/M
3300010361\|Ga0126378_11406843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	790	Open in IMG/M
3300010361\|Ga0126378_12145870	Not Available	637	Open in IMG/M
3300010366\|Ga0126379_10224743	Not Available	1827	Open in IMG/M
3300010366\|Ga0126379_10259175	Not Available	1718	Open in IMG/M
3300010366\|Ga0126379_12510278	Not Available	614	Open in IMG/M
3300010371\|Ga0134125_10620391	Not Available	1195	Open in IMG/M
3300010373\|Ga0134128_10213077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2172	Open in IMG/M
3300010373\|Ga0134128_10628526	All Organisms → cellular organisms → Bacteria → Proteobacteria	1194	Open in IMG/M
3300010376\|Ga0126381_102723438	Not Available	706	Open in IMG/M
3300010376\|Ga0126381_103972060	Not Available	576	Open in IMG/M
3300010376\|Ga0126381_104463402	Not Available	541	Open in IMG/M
3300011119\|Ga0105246_12532713	Not Available	505	Open in IMG/M
3300012202\|Ga0137363_11267055	Not Available	625	Open in IMG/M
3300012206\|Ga0137380_10367286	All Organisms → cellular organisms → Bacteria	1282	Open in IMG/M
3300012208\|Ga0137376_11530348	Not Available	558	Open in IMG/M
3300012212\|Ga0150985_100436154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	591	Open in IMG/M
3300012212\|Ga0150985_111507737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	767	Open in IMG/M
3300012360\|Ga0137375_11324751	Not Available	542	Open in IMG/M
3300012469\|Ga0150984_120900342	All Organisms → cellular organisms → Bacteria	1187	Open in IMG/M
3300012958\|Ga0164299_10881005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	647	Open in IMG/M
3300012960\|Ga0164301_11717966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	525	Open in IMG/M
3300012971\|Ga0126369_10920630	Not Available	960	Open in IMG/M
3300012971\|Ga0126369_12137835	Not Available	647	Open in IMG/M
3300014501\|Ga0182024_11230922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	873	Open in IMG/M
3300014968\|Ga0157379_11702201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	618	Open in IMG/M
3300016270\|Ga0182036_10769434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	783	Open in IMG/M
3300016270\|Ga0182036_10790587	Not Available	772	Open in IMG/M
3300016270\|Ga0182036_11218005	Not Available	626	Open in IMG/M
3300016341\|Ga0182035_10781928	Not Available	836	Open in IMG/M
3300016445\|Ga0182038_11450721	Not Available	615	Open in IMG/M
3300020580\|Ga0210403_10007946	All Organisms → cellular organisms → Bacteria → Proteobacteria	8771	Open in IMG/M
3300021420\|Ga0210394_10130123	Not Available	2181	Open in IMG/M
3300021560\|Ga0126371_10308074	Not Available	1712	Open in IMG/M
3300021560\|Ga0126371_11177932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	903	Open in IMG/M
3300021560\|Ga0126371_11349796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	845	Open in IMG/M
3300021560\|Ga0126371_11898895	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300021560\|Ga0126371_12635073	Not Available	609	Open in IMG/M
3300021560\|Ga0126371_13570469	Not Available	525	Open in IMG/M
3300025903\|Ga0207680_10529692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	840	Open in IMG/M
3300025910\|Ga0207684_11181315	Not Available	634	Open in IMG/M
3300025912\|Ga0207707_10123817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2261	Open in IMG/M
3300025917\|Ga0207660_10394725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1114	Open in IMG/M
3300025941\|Ga0207711_11960017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	528	Open in IMG/M
3300026319\|Ga0209647_1060156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1982	Open in IMG/M
3300027706\|Ga0209581_1004402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11338	Open in IMG/M
3300027773\|Ga0209810_1002157	All Organisms → cellular organisms → Bacteria	24796	Open in IMG/M
3300029636\|Ga0222749_10005307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5315	Open in IMG/M
3300030967\|Ga0075399_11148120	Not Available	509	Open in IMG/M
3300031057\|Ga0170834_103227774	Not Available	577	Open in IMG/M
3300031128\|Ga0170823_11397550	Not Available	669	Open in IMG/M
3300031231\|Ga0170824_114142661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu6071	1078	Open in IMG/M
3300031543\|Ga0318516_10216510	Not Available	1107	Open in IMG/M
3300031546\|Ga0318538_10292416	Not Available	877	Open in IMG/M
3300031572\|Ga0318515_10057618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1970	Open in IMG/M
3300031572\|Ga0318515_10505454	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300031573\|Ga0310915_10883611	Not Available	627	Open in IMG/M
3300031681\|Ga0318572_10115879	All Organisms → cellular organisms → Bacteria	1526	Open in IMG/M
3300031768\|Ga0318509_10374271	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300031805\|Ga0318497_10610889	Not Available	611	Open in IMG/M
3300031820\|Ga0307473_10975547	Not Available	617	Open in IMG/M
3300031879\|Ga0306919_10911856	Not Available	673	Open in IMG/M
3300031890\|Ga0306925_10363592	All Organisms → cellular organisms → Bacteria	1553	Open in IMG/M
3300031910\|Ga0306923_12139783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	563	Open in IMG/M
3300031910\|Ga0306923_12550919	Not Available	503	Open in IMG/M
3300031912\|Ga0306921_11281303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	812	Open in IMG/M
3300031941\|Ga0310912_11123213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	600	Open in IMG/M
3300031942\|Ga0310916_11588603	Not Available	531	Open in IMG/M
3300031945\|Ga0310913_10333821	Not Available	1072	Open in IMG/M
3300031954\|Ga0306926_10087280	All Organisms → cellular organisms → Bacteria → Proteobacteria	3806	Open in IMG/M
3300031954\|Ga0306926_10418402	All Organisms → cellular organisms → Bacteria → Proteobacteria	1653	Open in IMG/M
3300031996\|Ga0308176_10433241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1320	Open in IMG/M
3300032039\|Ga0318559_10167168	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300032059\|Ga0318533_10292383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1181	Open in IMG/M
3300032059\|Ga0318533_11089772	Not Available	585	Open in IMG/M
3300032068\|Ga0318553_10266729	Not Available	895	Open in IMG/M
3300032076\|Ga0306924_10500874	Not Available	1383	Open in IMG/M
3300032205\|Ga0307472_100478854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1067	Open in IMG/M
3300032261\|Ga0306920_100646104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1563	Open in IMG/M
3300032261\|Ga0306920_103250647	Not Available	607	Open in IMG/M
3300032770\|Ga0335085_10000314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	144620	Open in IMG/M
3300032770\|Ga0335085_11266428	Not Available	780	Open in IMG/M
3300032770\|Ga0335085_11268624	Not Available	779	Open in IMG/M
3300032892\|Ga0335081_10109109	All Organisms → cellular organisms → Bacteria → Proteobacteria	4087	Open in IMG/M
3300033158\|Ga0335077_10501982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1283	Open in IMG/M
3300033290\|Ga0318519_10658935	Not Available	638	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.30%
Host-Associated	Host-Associated	8.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.43%
Plants	Host-Associated → Plants	8.70%
Aquatic	Environmental → Aquatic	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.74%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.70%
Loam	Environmental → Terrestrial → Soil → Loam	16.52%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.48%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.74%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.87%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	34.78%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.09%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.61%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.61%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.74%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.87%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.87%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.39%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.04%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.35%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.48%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.48%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.48%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.74%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.74%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.74%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.87%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.87%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.87%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.87%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030967	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deeps_03238370	2199352024	Soil	MTMAIQIEIVLIAGVVAIGLMVLGRAIATGLTVSKRPAHHLAEQTGSSPVPPAVDVRPPE
JGI1027J11758_129242661	3300000789	Soil	MAIQIEIVLIAGIVAIALIVVGKAIITGLAISRRPSHHLAEQTGTSPVPPEAQVPPPSGG
C688J35102_1205120451	3300002568	Soil	MAIQIEIILIAGLVAAALIILVKQIRTGRAMSRRPSHHLAEQTGSSPVPPEVDLESRG*
C688J35102_1205724022	3300002568	Soil	MAVQVEIILIAGVLAIGLMVLGKYIVTGIAISRRPSHHLAEQTGSSPVPPAVDIRPPE*
JGIcombinedJ51221_103703081	3300003505	Forest Soil	MAIQIEIVLIAGIVAIGLIVLGRAILAGLAISRRPSHHLAEQTGTSPPPLPPEARIPPG
Ga0063455_1014405641	3300004153	Soil	GIMAVQVEIILIAGVLAIGLMVLGKYIVTGIAISRRPSHHLAEQTGSSPVPPAVDIRPPE
Ga0070690_1009591512	3300005330	Switchgrass Rhizosphere	MAIEIEIVLIAGVVAIGLIVLVRAIGTGFAISRRPSHHLSQQTGAPPVGPAVDIR
Ga0066388_1070379812	3300005332	Tropical Forest Soil	MAIQIEIVLIAAVVAIALIVLGRAIVTGLAISRRPSHHLAQQTGTSPVPPEAQIPRPNGG
Ga0070666_100592702	3300005335	Switchgrass Rhizosphere	MAIEIEIVLIAGVVAIGLIVLVRAIGTGFAISRRPSHHLSQQTGAPPVGPAVDIRPPE*
Ga0070680_1010359402	3300005336	Corn Rhizosphere	MAIQIEIVLIAGVVAIGLIVLVRAIGTGFAISRRPSHHLSQKTGASPVPPAVDVRPPE*
Ga0070680_1013882382	3300005336	Corn Rhizosphere	MAVQMEIILIAGVVAIALIVVGQAIATGFAIARRPSHHLAEKTGTSPVPPEAGLPPPNH*
Ga0070661_1012858192	3300005344	Corn Rhizosphere	MAIQIEIVSIAAMVAIGLIVLAGAIATGIGISRRRAHHLAEQTGSSPMPPAVDVRPPE
Ga0070713_1021214291	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MGIQIEIVLIAAMVAIGLIVLGRAIATGVRISRRRAHHLAEQTGSSPVPPAVDVRPPE*
Ga0070741_111491642	3300005529	Surface Soil	MAIQIEIVLIAGVVAVGLIAVYRAIVTGRAISRRPSHHLAEHTGTTPVPPGADIPPPA*
Ga0070739_100018026	3300005532	Surface Soil	MAVELEIVLIAGVVALGLIVLGKAIMTGFAMSRRPPHHLTERPGASPVPPAVDIRPPG*
Ga0066903_1002987371	3300005764	Tropical Forest Soil	MAIQIEIWLIAAVAAIALIVVGKAIITGLAISRRASHHLATQTGTSPVPPETQVPPQIPPGGL*
Ga0066903_1003131181	3300005764	Tropical Forest Soil	MAIQIEIVLIAGVVAIALIVLGRAIMTGLAMSRRASHHLAEQTGTKPVPPEAQVPESKSLWGR*
Ga0066903_1004465112	3300005764	Tropical Forest Soil	MAIQIEIVLIAGAVAIGLIVLGRAIVTGLAISRRPSHHLAQQTGTSPVPPEAQIPPSNGG
Ga0066903_1005513654	3300005764	Tropical Forest Soil	MAIQIEIVLIAGVVAIALIVVGRAIFNGLAMSSRPSHHLAQQTGTMPVPPGTQVPPSERG
Ga0066903_1005973662	3300005764	Tropical Forest Soil	MAIQIEIVLIAGVVAIGLIVVGRAIATGLVIFRRRSHHLAQDTGASRVPPAVVASSVSDIRPPE*
Ga0066903_1048495043	3300005764	Tropical Forest Soil	MAVQLEIILIAGVVAVGLIVLGKAIMTGFTMSRRPSHHLAEQTGASPVPPAVDIRPPG*
Ga0066903_1089616201	3300005764	Tropical Forest Soil	MAIQLEIVLIAGVVAVGLIILGKAIMIGFTVSRRPSHHLAEQTGARPVPPAVDIRPP*
Ga0066696_101984162	3300006032	Soil	MAIQIEIVLIAGVVALGLMVLGRAIVTGIAISRRRSHHLAERTGASSVPPAVDIRPPE*
Ga0079221_103478412	3300006804	Agricultural Soil	MAIQIEIVSIAAMVAIGLIVLAGAIATGIGISRRRAHHLAEQTGSSPVPPAVDVRPPE*
Ga0079221_111656052	3300006804	Agricultural Soil	MAIQIEIVLIAGVVAIALIVLGRAIVTGLAISRRRSHHLAQQTGASPVPPAVDLRPPE*
Ga0102924_10669103	3300007982	Iron-Sulfur Acid Spring	MAIQIEIVLIAGVVAIGLPVFGGAIVTGLSIGRRPSHHLAQQTGTSPVPPEAQISPPSG*
Ga0075423_120462201	3300009162	Populus Rhizosphere	MAIQIEIWLIAAVVAIALIVVGKAIITGLAISRRPSHRLATQTGTSPVPPEAQVPPQGGA
Ga0126310_117398611	3300010044	Serpentine Soil	MAIQLEIILIAGLVAGALIILGKQIRTGIAMSRRPSHHLAEQTGSSPVPPEVDLESRG*
Ga0126373_104131862	3300010048	Tropical Forest Soil	MALQLEIILIAGVVALGLIVLGKAIMTGFTISRRPSHHLAEQTNASPVPPAVVASSVSDIRPPK*
Ga0126373_125335712	3300010048	Tropical Forest Soil	MAVEFEIILIAAIAAVGLIAIGKAIMTGLAISRRASHHLAEQTGTSPVPPEAQIPPSNH*
Ga0126378_114068432	3300010361	Tropical Forest Soil	MAIQLEIILIAAVAAIGLIALGKAITTGIAISRRPSHHLAEKTGVSPVPPEAQIPPSNH*
Ga0126378_121458702	3300010361	Tropical Forest Soil	MAIQIEIVLIAGVVAIGLIVLGRAIWFAISRRPSHHLAPQTATSPVPPEALVGSPGLTQYPRAVGASQTR
Ga0126379_102247434	3300010366	Tropical Forest Soil	MAIQIEIVLIAGVVAIALIVLGRGIVTGLAISRRRSHHLAQQTGTSPVPPEAQIPPSNGG
Ga0126379_102591753	3300010366	Tropical Forest Soil	MAVQSEIILIAGVLAVGLIVLGKAIMTGFTMSRRPSHHLAEQTGSSPVPPAV
Ga0126379_125102783	3300010366	Tropical Forest Soil	MAIQIEIWLIAAVVAIALIVVGKAIITGLAISRRASHHLATQTGTSPVPPETQVPPQIPPGGL*
Ga0134125_106203911	3300010371	Terrestrial Soil	MAIQLEIVLIATVVAIGLIVLGKAIATGIAISRRPAHHLAEQTGSSPVPPAVDLRPPG*
Ga0134128_102130774	3300010373	Terrestrial Soil	MAIQLEIVLIATVVAIGLIVLGKAIVTGIAISRRPAHHLAEQTGSSPVPPAVDLRPPG*
Ga0134128_106285263	3300010373	Terrestrial Soil	MAIQLEIILIAGLVAGALIILGKAIMTGIAMSRRPSHHLATRTGASAVPPEVDLRPPE*
Ga0126381_1027234382	3300010376	Tropical Forest Soil	MAVQLEIILIAGVVALGLIVLGKAIMTGFTISRRPSHHLAEQTSASPVPPAVVASSVSDIRPPK*
Ga0126381_1039720601	3300010376	Tropical Forest Soil	MAIQIEIVLIAGVVAIALIVLGRHIVTGLAISRRPSHHLAQQTGTSPVPPEAQIPPSNGG
Ga0126381_1044634021	3300010376	Tropical Forest Soil	MAVQIEIVLIAGVVAIGLIVLGKAIVTGLAMSRRPSHHLAQQTGTSPVPLEAQIPRPNGG
Ga0105246_125327131	3300011119	Miscanthus Rhizosphere	MAIQIEIVLIAGVVAIALIVSGRAIVTGLAISRRRSHHLAQQTGASPVPPAVDLRPPE*
Ga0137363_112670551	3300012202	Vadose Zone Soil	MENYLAIQLEIILIAAVVAIAMIAVGKAIMTGFAISRRPSHHLAEQSGTSPVPPEAQIPP
Ga0137380_103672862	3300012206	Vadose Zone Soil	MLVEWIIAGVVSIGLIAVGKAMVTGFSISRRRSHHAAQQTGTSPVPPTAQIPPSSGA*
Ga0137376_115303483	3300012208	Vadose Zone Soil	IAAVVAIAMIAVGKAIMTGFAISRRPSHHLAEQTGTSPVPPEAQIPPSNHG*
Ga0150985_1004361542	3300012212	Avena Fatua Rhizosphere	GGHSMAVQLEIILIAAVVAVALIVLGKAIMTAFALSRRPPHHLAEQTGVSPVPPAVDSRPPG*
Ga0150985_1115077371	3300012212	Avena Fatua Rhizosphere	MAIQIEIVLIAGVVAIGLIVLGRGIITGLTISRRPSHHLAQQTGASPVPPAVDIRPPG*
Ga0137375_113247512	3300012360	Vadose Zone Soil	NGDKTVAIQIEIVLIAGMVAIGLIVLGRAIGTGLAISRRRSHHLAQQTGTSPVPPEAQIHPPSGG*
Ga0150984_1209003422	3300012469	Avena Fatua Rhizosphere	VAIQIEIVLIAGIVAVGLIVLGRAIGTALGISRRSSHHLAEQTGTSPVPPTVDLRPPE*
Ga0164299_108810052	3300012958	Soil	MAIQIEIVLIAGIVAIGLIVLGRAIGVGLAISRRPSHHLAEKTGTPPVTPEVDVRPPE*
Ga0164301_117179661	3300012960	Soil	MAIEIEIVLIAGVVAIGLIVLVRAIGTGFAISRRPSHHLSQQTGAPPVGP
Ga0126369_109206302	3300012971	Tropical Forest Soil	MAIQIEIVLIAGVVAIGLIVLGRAIVTAITISRRPSHYLAQQTGALPVPPEVETPPRPLSDR*
Ga0126369_121378351	3300012971	Tropical Forest Soil	MAIQLEIVLIAGVVAVGLIVLGKAIMTGFTMSRRPSHHLAEQTGASPVPPAVVASSVSDIRPPK
Ga0182024_112309221	3300014501	Permafrost	SGESGEIMAIQIEIVLIAGVVAVALIALGRAIVAGITISRRSSHHLAQQTGTSPVPPAVDMRPPE*
Ga0157379_117022012	3300014968	Switchgrass Rhizosphere	MAIEIEIVLIAGVVAIGLIVLVRAIGTGFAISRRPSHHLSQQTGAPPV
Ga0182036_107694342	3300016270	Soil	MAVQLEIILIAGVVAVGLIVLGEAIMTGFTMSRRPSHHLAEQTGSSPVPPAVDIRPPG
Ga0182036_107905871	3300016270	Soil	MAMQIEIVLIAGVVAIGLIVLGRAIVNGITISRRPTHHLTQQTGTLPVPPEVEVPPRPLSDR
Ga0182036_112180051	3300016270	Soil	MAIQIEIVLIAAAVAIGLIVLVRAIATGITISRRRAHHLAEQSGSSSVPPA
Ga0182035_107819282	3300016341	Soil	MAIEIEIVLIAGVVAIGLIVLGRAIATGLAISRRPSHHLAQGTGASPVPPAVVASSISDIRPPE
Ga0182038_114507211	3300016445	Soil	MAVQLEIILIAGVVAVGLIVLGKAIVTGFTMSRRPSHHLAEQTGASPVPPAVDIRPPG
Ga0210403_1000794612	3300020580	Soil	MAIQIEIVLIAGIVAIGLIVLGRAILAGLAISRRPSHHLAEQTGTSPPPLPPEARIPPGA
Ga0210394_101301236	3300021420	Soil	MAIEIEIVLIAGVVAIGLIVLGRAIITGLAISRRRSNHLAQQTGASPVPPAIDVRPPG
Ga0126371_103080742	3300021560	Tropical Forest Soil	MALQLEIILIAGVVALGLIVLGKAIMTGFTISRRPSHHLAEQTSASPVPPAVVASSVSDIRPPK
Ga0126371_111779322	3300021560	Tropical Forest Soil	MAVEFEIILIAAIAAVGLIAIGKAIMTGLAISRRASHHLAEQTGTSPVPPEAQIPPSNH
Ga0126371_113497961	3300021560	Tropical Forest Soil	IEIVLIAGVVAIGLIVLGRAIVTGITIFRRPSHHLAQQTGALPVPPEVEIPPRPLSDR
Ga0126371_118988951	3300021560	Tropical Forest Soil	MAIQLEFILIAAVAAIGLIALGKAITTGIAISRRPSHHLAEKTGASPVPPEAQIPP
Ga0126371_126350731	3300021560	Tropical Forest Soil	MAIQLEIVLIAGVVAVGLIILGKAIMIGFTVSRRPSHHLSEQTGARPVPPAVDIRSPG
Ga0126371_135704691	3300021560	Tropical Forest Soil	MAIQLEIVLIAGVVAIGLIVLGRAIATGRAISRRSSHHLAQETGASPVPPAAQ
Ga0207680_105296922	3300025903	Switchgrass Rhizosphere	MAIEIEIVLIAGVVAIGLIVLVRAIGTGFAISRRPSHHLSQQTGAPPVGPAVDIRPPE
Ga0207684_111813151	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAIQIEIWLIAAVVAIALIVVGKAIITGLAISRRPSHHLATQTGTSPVPPEAQVPPQGGA
Ga0207707_101238172	3300025912	Corn Rhizosphere	MAVQMEIILIAGVVAIALIVVGQAIATGFAIARRPSHHLAEKTGTSPVPPEAGLPPPNH
Ga0207660_103947252	3300025917	Corn Rhizosphere	MAIQIEIVLIAGVVAIGLIVLVRAIGTGFAISRRPSHHLSQKTGASPVPPAVDVRPPE
Ga0207711_119600171	3300025941	Switchgrass Rhizosphere	LMAIEIEIVLIAGVVAIGLIVLVRAIGTGFAISRRPSHHLSQQTGAPPVGPAVDIRPPE
Ga0209647_10601561	3300026319	Grasslands Soil	MAIQIEIVLIAGVVAIGLIVLGRAIVTGLAISRRPSHHLAQQTGTSPVPPAIDVRPPE
Ga0209581_100440213	3300027706	Surface Soil	MAIQIEIVLIAGVVAVGLIAVYRAIVTGRAISRRPSHHLAEHTGTTPVPPGADIPPPA
Ga0209810_100215723	3300027773	Surface Soil	MAVELEIVLIAGVVALGLIVLGKAIMTGFAMSRRPPHHLTERPGASPVPPAVDIRPPG
Ga0222749_100053079	3300029636	Soil	MAIRIEIVLIAGIVAIGLIVLGRAIVAGLAISRRPSHHLTQQTGTSPVPPEAQLPPGGGL
Ga0075399_111481202	3300030967	Soil	MENYLAIQLEIILIAAVVAIAMIAVGKAIMTGLAISRRRSHHLAEQTGTSPVPPEAQIPPSNHG
Ga0170834_1032277741	3300031057	Forest Soil	MVIELIGAGVVSLAIIVVAKAIITGFAISRRPSHHLAEQTGTSPVPPEAQVPPPSGG
Ga0170823_113975501	3300031128	Forest Soil	MAIEIEILIIAAVAALGIIAVGKAIITGLAISRRRSHHLATHTGTSPVPPEAQQPPGGI
Ga0170824_1141426612	3300031231	Forest Soil	MENYLAIQLEIILIAAVVAIAMIAVGKAIMTGFAISRRPSHHLAEQTGTSPVPPEAQIPP
Ga0318516_102165102	3300031543	Soil	MAIQIEIVLIAGVVAIALIVLGRTIVTGLAMSRRPSHHLAEQTGTKPVPPEAQIPTETTPWGR
Ga0318538_102924161	3300031546	Soil	MAIQIEIVLIAGVVAIALIVLGRTIVTGLAMSRRPSHHLADQTGTKPVPPEAQIPTETTPWGR
Ga0318515_100576181	3300031572	Soil	MAIQIEIVLIAGVVAIALIVLGRGIVTGLAISRRRSHHLAQQTGTSPVPPE
Ga0318515_105054541	3300031572	Soil	MAAQLEIILIAGVVAVGLIVLGKAIMTGFTMSRRPSHHLAEQTGSSPVPPAVDIRPPA
Ga0310915_108836111	3300031573	Soil	MAIQIEIVLIAGVVAIAFIVLGRAIMTGLAMSRRASHHLAEQTGTKRVPLEAQVPESKSLWGP
Ga0318572_101158791	3300031681	Soil	MAVQLEIILIAGVVAVGLIVLGEAIMTGFTMSRRPSHHLAERTGSSPVPPAVDIRPPG
Ga0318509_103742712	3300031768	Soil	MAVQLEIILIAGVVAVGLIVLGEAIMIGFTMSRRPSHHLAEQTGSSPVPPAVDIRPPA
Ga0318497_106108892	3300031805	Soil	MAAQLEIILIAGVVAVGLIVLGKAIMTGFTMSRRPSHRLAEQTGSSPVPPAVDIRPPG
Ga0307473_109755472	3300031820	Hardwood Forest Soil	MAIQIEIWLIAAVVAIALIVVGKAIITGLAISRRASHHLATQTGTSPVPPE
Ga0306919_109118561	3300031879	Soil	MAIQIEIVLIAGVVAIALIVLGRTIVTGLAMSRRPSHHLAEQTGTKPVPPEAQIPTET
Ga0306925_103635921	3300031890	Soil	MAAQLEIILIAGVVAVGLIVLGKAIMTGFTMSRRPSHHLAEQTGSSPVPPAVDIRPPG
Ga0306923_121397831	3300031910	Soil	MAVQLEIILIAGVVAVGLIVLGEAIMTGFTMSRRPSHHLAEQTGSSPVPPAVDIRPPA
Ga0306923_125509191	3300031910	Soil	MAIQIEIVLIAGVVAIGLIVLGRAIATGRAISRRSSHHLARKTGVSPVPPAAQIPPSNHG
Ga0306921_112813031	3300031912	Soil	MAMQIEIVLIAGVVAIGLIVLGRAIVNGITISRRPTHHLTQQTGTLPVPPEVEVPPQPLSDR
Ga0310912_111232132	3300031941	Soil	MQIEIVLIAGVVAIGLIVLGRAIVNGITISRRPTHHLTQQTGTLPVPPEV
Ga0310916_115886032	3300031942	Soil	DGASMAAQLEIILIAGVVAVGLIVLGKAIMTGFTMSRRPSHHLAEQTGSSPVPPAVDIRPPG
Ga0310913_103338211	3300031945	Soil	MAIQIEIVLIAGVVAIALIVLGRTIVTGLAMSRHHLAEQTGTKPVPPEAQIPTETTPWGR
Ga0306926_100872801	3300031954	Soil	MAIQIEIVLIAGVVAIALIVLGRTIVTGLAMSRRPSHHLAEQTGTKPVPPEAQIPTETT
Ga0306926_104184022	3300031954	Soil	MAIQIEIVLIAGAVAIGLIVLGRAIITGLAISRRPSHHLAQQTGTSPVPPEAQIPPSNGG
Ga0308176_104332411	3300031996	Soil	MAIQLEIILIAGLVAGALIILGKAIMTGIAMSRRPSHHLATRTGASAVPPEVDLRPPE
Ga0318559_101671681	3300032039	Soil	MAIQLEIILIAGVIAVGLIVLGKAIMTGFTMSRRPSHHLAEQTGSSPVPPAVDIRPPG
Ga0318533_102923833	3300032059	Soil	MALQLEIILIAGVIALGLIVLGKAIMTGFTISRRPSHHLAEQTGASPVPPAVDIRPPG
Ga0318533_110897721	3300032059	Soil	MAIQIEIVLIAGVVAIGLIVLGRAIATGRAISRRSSHHLARETGASSVPPAAQIPPSNHG
Ga0318553_102667292	3300032068	Soil	MAIQIEIVLIAGVVAIALIVLGRTIVTGLAMSRRLSHHLAEQTGTKPVPPEAQIPTETTPWGR
Ga0306924_105008744	3300032076	Soil	MAIQIEIVLIAGVVAIALIVLGRTIVTGLAMSRRPSHHLAEQTGTKPVPPEAQIPTETTPWER
Ga0307472_1004788542	3300032205	Hardwood Forest Soil	VAIQIEIVLIAGIVAIGLIVLGRAIGIGLVISRRPSHHLAQQTGTSPVPPAVDVWPPERNDHALKDRVVRSGPP
Ga0306920_1006461042	3300032261	Soil	MENYLAIQLEIILIAAVVAIAMIAVGKAIMTGFAISRRPSHHLAEQTGTSPVPPEAQIPPSNHG
Ga0306920_1032506471	3300032261	Soil	MAIQIEIVLIAAAVAIGFIVLVRAIATGITISRRRAHHLAEQSGSSSVPPAIDIRPPE
Ga0335085_1000031428	3300032770	Soil	MAIEVEIVLIAGVVAIGLIVLGKAMIVGMTMSRRCAHHLAQQTGGSPVPPAVDLRPPG
Ga0335085_112664282	3300032770	Soil	MAIEVEIVLIAGVVAIGLIVLGKTIILAMTMSRRRAHHLAQQTGNLPVRSGVDIRPPE
Ga0335085_112686242	3300032770	Soil	MAIQVEIVLIAGVVAIGLIVLGRAIIVGMAMSRRRTHHLAQQTGSSPMPPAVDIRPP
Ga0335081_101091093	3300032892	Soil	MAIEIEIVLIAGVVAIGLIVLGRAIVTAITIFRRPSHHLAERTGAKPVPPAVDIRPPG
Ga0335077_105019822	3300033158	Soil	MAIEIEIVLIAGVVAIGLIVLGRAIVTAIMIFRRPSHHLAERTGAKPVPPAVDIRPPG
Ga0318519_106589352	3300033290	Soil	MAIQIEIVLIAGVVAIALIVLGRGIVTGLAISRRRSHHLAQQTGTSPVPPEAQI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079793

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences