NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F079848

Metagenome / Metatranscriptome Family F079848

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F079848
Family Type Metagenome / Metatranscriptome
Number of Sequences 115
Average Sequence Length 129 residues
Representative Sequence MSDQNRGELSDKDKIDRAAWHEEVRFLKKQQWAVATAGVLLLGALLATIRNMHMTVLDKFLAVVLIAIGVYAGWLFLDDLQYGLADVRRWLDPADRDAATRGREILYLHKFILVASAVVVVWAVLFKLP
Number of Associated Samples 91
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 57.89 %
% of genes near scaffold ends (potentially truncated) 6.96 %
% of genes from short scaffolds (< 2000 bps) 16.52 %
Associated GOLD sequencing projects 88
AlphaFold2 3D model prediction Yes
3D model pTM-score0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (95.652 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(18.261 % of family members)
Environment Ontology (ENVO) Unclassified
(32.174 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(57.391 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 64.33%    β-sheet: 0.00%    Coil/Unstructured: 35.67%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.53
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 115 Family Scaffolds
PF04392ABC_sub_bind 2.61
PF11295DUF3096 1.74
PF03466LysR_substrate 1.74
PF00589Phage_integrase 1.74
PF13586DDE_Tnp_1_2 0.87
PF00239Resolvase 0.87
PF08734GYD 0.87
PF07583PSCyt2 0.87
PF00034Cytochrom_C 0.87
PF05598DUF772 0.87
PF00536SAM_1 0.87

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 115 Family Scaffolds
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 2.61
COG1961Site-specific DNA recombinase SpoIVCA/DNA invertase PinEReplication, recombination and repair [L] 0.87
COG2452Predicted site-specific integrase-resolvaseMobilome: prophages, transposons [X] 0.87
COG4274Uncharacterized conserved protein, contains GYD domainFunction unknown [S] 0.87


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A95.65 %
All OrganismsrootAll Organisms4.35 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000655|AF_2010_repII_A100DRAFT_1065385Not Available643Open in IMG/M
3300000789|JGI1027J11758_13063688All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1072Open in IMG/M
3300004268|Ga0066398_10163309Not Available567Open in IMG/M
3300010358|Ga0126370_10292591Not Available1287Open in IMG/M
3300010361|Ga0126378_11226266Not Available847Open in IMG/M
3300010376|Ga0126381_102475835Not Available744Open in IMG/M
3300010376|Ga0126381_103191321Not Available648Open in IMG/M
3300010398|Ga0126383_10333686All Organisms → cellular organisms → Bacteria1530Open in IMG/M
3300010868|Ga0124844_1058771Not Available1379Open in IMG/M
3300012361|Ga0137360_10469457Not Available1068Open in IMG/M
3300012948|Ga0126375_11065161Not Available663Open in IMG/M
3300012971|Ga0126369_10337290All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1524Open in IMG/M
3300020016|Ga0193696_1025952Not Available1570Open in IMG/M
3300026498|Ga0257156_1070325Not Available725Open in IMG/M
3300031543|Ga0318516_10701876Not Available574Open in IMG/M
3300031744|Ga0306918_10624748Not Available844Open in IMG/M
3300031820|Ga0307473_10997601Not Available611Open in IMG/M
3300032060|Ga0318505_10054806All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1719Open in IMG/M
3300032180|Ga0307471_100378748All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1535Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil18.26%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil14.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil13.04%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil7.83%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil7.83%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.48%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring2.61%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.74%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.74%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.74%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.74%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.74%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.74%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.87%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.87%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.87%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.87%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.87%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.87%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.87%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.87%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.87%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.87%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.87%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.87%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.87%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.87%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.87%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.87%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.87%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000655Forest soil microbial communities from Amazon forest - 2010 replicate II A100EnvironmentalOpen in IMG/M
3300000789Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001545Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004268Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBioEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006038Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5Host-AssociatedOpen in IMG/M
3300006057Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300006953Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010868Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)EnvironmentalOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017822Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020016Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redoEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021510Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coexEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026498Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-AEnvironmentalOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028720Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028876Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140EnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032025Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20EnvironmentalOpen in IMG/M
3300032060Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10041550323300000364SoilMPDKDKEIIDRAALHEEVRFLKKQQWAVAXAGVILFGGFLATIRGEHMSTLEKFLAVVLIAVGVWAGWFFLDDLQNGLAGVRRKLDPTDCAAETRGSEILNLHKGILVASALVVAWVVLFKVH*
INPhiseqgaiiFebDRAFT_10465145513300000364SoilNPSIRQILAPSVRVAVLAAGGTTIGMLVYQVALYLPLTRPQPARPXAVSYENRDELSDKDKIDRAAWHDEARFLKKQQWAIATAGVLLLAGLLAAIRNMHLTALDRFLTVVLIAIGVYVGWLFLDDLQYGLARLRCSLDPTDRDATIRGREILHLLKFILVVSALVVAWAVLFKLP*
AF_2010_repII_A100DRAFT_106538513300000655Forest SoilMSDQATDNLSDKDKIDRAAQHEELRFYKKQQWAVTTAGVVLLGAFLTTVSKVHITALDKFFAVILIFLAVFAGWFVLDNFQEGIVQVRRALDPADRDAAIRGREILSLHKSILVASAVVVGWAVLFKLPL*
JGI1027J11758_1306368833300000789SoilLRFYKKQQWAVITAGVVLLGAFLTTVHNLHITALDKCLAVILICLAVCAGWFVLDNLQEGIVNVRRALDPADYDLAIRGREILNLHKVILVATAVVVGWAVLFKLPL*
JGI12630J15595_1003296023300001545Forest SoilMSDQNNGDLTDKEKIDREAWHEEVRFLKKQQWAVATAGVVLFGGFLATIRNYHMTPLDKFLAVLLITIGACFGWWFLDDLQCGLAKVRRALDPADRAATTRGREIVYLHKAILVASAAVVVWAVLFKLS*
Ga0062593_10261431013300004114SoilVSYENREELSDKDKIDRAAWHEEVRFLKKQQWAITIAGVLLLTGLLAAIRNMHLTVLDRFLAVMLIAIGVYVGWLFLDDLQYGLARLRRSLDPTDRDATIGGREILHLLKFILVVSALVVAWAVLFKLP*
Ga0066398_1016330913300004268Tropical Forest SoilMSDQANGHLSDKDKIDRAAQHEELRFCKKQQWAVTTAGVVLLGAFLTAVTNVRITALDKFFAVILIFLAVFAGWFVLDNFQEGIVQVRRALDPADRDAAIRGREILSLHKSILVASAVVVGWAVLFKLPL*
Ga0066388_10106951813300005332Tropical Forest SoilRIMSDQNRGGLTDQEKIDRAARHEEVRFLKRQQWAVATAGAILSGAFLATINNYHMTPLDRFLAVLLIVLGVWAGWFFLDDLQCGLARVRRALDPADHEAATRGSPIVNLHKAILVASALVVVWAVLFKVR*
Ga0066388_10514017813300005332Tropical Forest SoilMSDQNRGGLTDQEKIDRAARHEEVRFLKRQQWAAATAGAVLSGAFLATINNYHMTPLDRFLAVLLLAAGVWAGWFFLDDLQCGLARVRRALDPADHEASTRGSPIVNLHKAILVASALVVAWAVLFKVR*
Ga0066388_10648799813300005332Tropical Forest SoilMDQNRDNLTDKEKIDRAVDRAAWREEVRFLKKQQWAVATAGVVLLSGLLAAIRDYHLTALDKFIVVVVIGLGVWCGWFFLDDLQRGLAVVRRALYPSDYAASTRGQEIVNLHKAIL
Ga0070710_1108635813300005437Corn, Switchgrass And Miscanthus RhizosphereVSYENTDELSDKDKIDRAAWYDEARFLKKQQWAIATAGVLLLAGLLAAVRNIHLTALDRFLAVVLVAIGVYVGWLSLDELQYGLAKFRRLLDPTDRDATVSGREICTF*
Ga0070710_1130195413300005437Corn, Switchgrass And Miscanthus RhizosphereMSDKDKEIIDRAALHEEARFLKKQQWAVASAGIILFGGFLATIRGEHMSTLEKFLAVVLIAVGVWAGWFFLDDLQNGLAGVRRKLNPADCAAETRGSEILNLHKGILVASALVVAWVVLFKVH*
Ga0070711_10029864523300005439Corn, Switchgrass And Miscanthus RhizosphereMSDKDKEIIDRAALHEEARFLKKQQWAVASAGVILFGGFLATIRGEHMSTLEKFLAVVLIAVGVWAGWFFLDDLQNGLAGVRRKLNPADCAAETRGSEILNLHKGILVASALVVAWVVLFKVR*
Ga0070711_10073598023300005439Corn, Switchgrass And Miscanthus RhizosphereVSYENREELSDKDKIDRAAWHDEVRFLKKQQWAITIAGVLLLTGLLAAIRNMHLTVLDRFLAVMLIAIGVYVGWLFLDDLQYGLARLRRSLDPTDRGATIGGREILHLLKFILVVSALVVAWAVLFKLP*
Ga0070711_10086280413300005439Corn, Switchgrass And Miscanthus RhizosphereMSDQNRGELSDKDKIDRAARHEEVRFLKKQQWAVATAGVLLLGALLATIRNMHMTVLDKFLAVVLIAIGVYAGWLFLDDLQYGLADVRRWLDPADRDAATRGREILYLHKFILVASAVVVVWAVLFKLP*
Ga0070706_10067076613300005467Corn, Switchgrass And Miscanthus RhizosphereMRGGAAFCAAQRNPDRPANGFTQMSDQNRDNLTDKEKIDRAARHEEVRLLKRQQWAVATAAVVLLSGLLTAIRNYHLTALDKFIVMVVVGLGVWCGWFFLDDLQCGLARVRRALDPADREAATRGANIVNLHKAILVGSAAFVVWMVLFKVRL*
Ga0066903_10064518623300005764Tropical Forest SoilMSDQNRGGLTDQEKIDRAARHEEVRFLKRQQWAVATAGAILSGAFLATINNYHMTPLDRFLAVLLIVLGVWAGWFFLDDLQCGLARVRRALDPADHEAATRGSPIVNLHKAILVASALVVVWAVLFKVR*
Ga0066903_10085448633300005764Tropical Forest SoilMSDQNRDNLTDKEKIDRAVDRAAWREEVRFLKKQQWAVATAGVVLLSGLLAAIRDYHLTALDKFIVVAVIGLGVWCGWFYLDDLQCGLAVVRRALYPSDYRASTRGQEIVNLHKAILVGSAAFVVWIILFKVH*
Ga0066903_10137773923300005764Tropical Forest SoilMSDQNRGGLTDQEKIDRAARHEEVRFLKRQQWAVATAGAVLSGAFLATINNYHMTPLDRFLAVLLLAAGVWAGWFFLDDLQCGLARVRRALDPADHEAATRGSPIVNLHKAILVASALVVAWAVLFKVR*
Ga0070717_1015223733300006028Corn, Switchgrass And Miscanthus RhizosphereMSEQNRDELSDKDKIDRAARHEEVRFLKKQQWAVAAAGVLLLGALLAALRNMHLTALDRFLAVVLIALGVYAGWLFLDDLQYAVVDVRRWLDPADRDAATRGREILHLHKLILVASAVVVVWAVLFKLP*
Ga0075365_1004043233300006038Populus EndosphereMSLNDQDKIDRAAFHEEVRFYKKQQWAVATAGVVLLGAFLATVRDVHLTALDKFLAVILIVAGVCAGGYFLDSLQEGLANVRRRLDPSDRDATTRGRDIVNLHKAILVFSVLVVVWALFRHP*
Ga0075026_10016027213300006057WatershedsMSDQNRGELSDKDKIDRAAWHEEVRFLKKQQWAVATAGVLLLGALLATIRNMHMTVLDKFLAVVLIAIGVYAGWLFLDDLQYGLADVRRWLDPADRDAATRGREILYLHKFILVASAVVVVWAVLFKLP*
Ga0075015_10046472923300006102WatershedsMSDQNRGELSDKDKIDRAARHEEVRFLKKQQWAVATAGVLLLGALLATIRTMHMTVLDKFLAVVLIAIGVYAGWLFLDDLQYGLADVRRWLDPADRDAATRGREILYLHKFILVASAVVVVWAVLFKLP*
Ga0066659_1021700513300006797SoilMSDQNRFGGALTNQDKEKIDRAARHEEVRFLKRQQWAVTTAGVVLLGAFLAIIRNHDMSAWDKHLAVLLIVVGVGAGCFFLDDLQNGLANVRRALGPADREVATRGGEILGRHGGTKPRGRGIARFL*
Ga0073928_1023428423300006893Iron-Sulfur Acid SpringMSGQNRDELSDKDKIDRAARHEEVRFLKKQQWAVATAGVLLLGALLATIRNMHMTVLDKFLAVVLIAVGVYAGWLFLDDLQYRLADVRRWLDPADHDAATRGREILHLHKFILVASAVVVVWAVLFKLP*
Ga0073928_1047995113300006893Iron-Sulfur Acid SpringMSDQNRGELSDKDKIDRAARHEEVRFLKKQQWAVATAGVLLLGALLATIRNMHMTVLDKFLAVVLIAIGVYAGWLFLDDLQYGLADVRRWLDPADRDAANRGREILYLHKFILVASAVVVVWAVLFKLP*
Ga0074063_1418401833300006953SoilMSDQNRGGLTDQEKIDRAARHEEVRFLKKQQWAVATAGAVLSGAFLVTISNYHMTPLDRILAVLLIAVGVWAGWFFLDDLQCGLARVRRALDPADHEAATRGSPIISLHKAILVASALVVVWAVLFKVR*
Ga0105241_1251584413300009174Corn RhizospherePGSRAVSYENRDELSDKDKIDRAAWYDEARFLKKQQWAIATAGVLLLAALLAAVRNIHLTALDRFLAVVLVAIGVYVGWLFLDELQYGLAKFRRLLDPTDRDATVSGREILHLLKFMLVASALVVVWAVLFKLP*
Ga0105248_1288315713300009177Switchgrass RhizosphereVSYENREELSDKDKIDRAAWHDEVRFLKKQQWAITIAGVLLLTGLLAAIRNMHLTALDRFLAVMLIAIGVYVGWLFLDDLQYGLARLRRSLDPTDRGATIGGREILHLLKFILVVSALVVAWAVL
Ga0105249_1289715413300009553Switchgrass RhizosphereVSYENRDELSDKDKIDRAAWYDEARFLKKQQWAIATAGVLLLAGLLAAVRNFHLTALDRFLAVVLVAIGVYVGWLFLDELQYGLAKFRRLLDPSQRPRNLHLLKFMLVASALVVVWAVLFKLP*
Ga0126382_1041873523300010047Tropical Forest SoilMSDQNRGGLTDQEKIDRAARHEEVRFLKRQQWAVATAGAVLSGAFLATISNYHMTPLDRFFAVLLLAAGVWAGWFFLDDLQCGLARVRRALDPADHEAATRGSPIVNLHKAILVASALVVFWAVLFKVR*
Ga0126373_1036287723300010048Tropical Forest SoilMDQNRDNLTDKEKIDRAVDRAAWREEVRFLKKQQWAVATAGVVLLSGLLAAIRDYHLTALDKFIVVVVIGLGVWCGWFFLDDLQRGLAVVRRALYPSDYAASTRGQEIVNLHKAILVGSAAFVVWIILFKVR*
Ga0126370_1007815433300010358Tropical Forest SoilMDQNRDNLTDKEKIDRAVDRAAWREEVRFLKKQQWAVATAGVVLLSGLLAAIRDYHLTALDKFIVVVVIGLGVWCGWFFLDDLQCGLARVRRALDPGDREALTRGGEIVNLHKAILVGSAAFVVWIILFKVR*
Ga0126370_1029259113300010358Tropical Forest SoilMSDQATDNLSDKDKIDRAAQHEELRFYKKQQWAVTTAGVVLLGAFLTTVSKVHITALDKFFAVILIFLAVFAGWFVLDTFQEGIVQVRRALDPADRDAAIRGREILSLHKSILVASGVVVGWAVLFKLPL*
Ga0126372_1191300313300010360Tropical Forest SoilMDQNRDNLTDKEKIDRAVDRAAWREEVRFLKKQQWAVATAGVVLLSGLLAAIRDYHLTALDKFIVVAVIGLGVWCGWFYLDDLQCGLAVVRRALYPSDYAASTRGQEIVNLHKAILVGSAAFVVWIILFKVH*
Ga0126378_1122626613300010361Tropical Forest SoilDRAAQHEELRFYKKQQWAVTTAGVVLLGAFLTTVSKVHITALDKFFAVILIFLAVFAGWFVLDTFQEGIVQVRRALDPADRDAAIRGREILSLHKSILVASGVVVGWAVLFKLPL*
Ga0126378_1263956613300010361Tropical Forest SoilDMSDQNRDNLTDKEKIDRAAWHEEVRFLKKQQWAVATAGVVLLSGLLAAIRDYHLTALDKFIVVVVIGLGVWCGWFFLDDLQRGLAVVRRALYPSDYAASTRGQEIVNLHKAILVGSAAFVVWIILFKVR*
Ga0126381_10247583513300010376Tropical Forest SoilEELRFYKKQQWAVTTAGVVLLGAFLTTVSKVHITALDKFFAVILIFLAVFAGWFVLDTFQEGIVQVRRALDPADRDAAIRGREILSLHKSILVASGVVVGWAVLFKLPL*
Ga0126381_10311091913300010376Tropical Forest SoilMSDQNRGGLTDQEKIDRAARHEEVRFLKRQQWAVATAGAVLSGAFLATISNYHMTPLDRFFAVLLLAAGVWAGWFFLDDLQCGLARVRRALDPADHEAATRGSPIVNLHKAILVASALVVAWAVLFKVR*
Ga0126381_10319132113300010376Tropical Forest SoilAAQHEELRFYKKQQWAVTTAGVVLLGAFLTTVSKVHITALDKFFAVILIFLAVFAGWFVLDNFQEGIVQVRRALDPADRDAAIRGREILSLHKSILVASAVVVGWAVLFKLPL*
Ga0126383_1033368623300010398Tropical Forest SoilMSDQATDNLSDKDKIDRAAQHEELRFYKKQQWAVTTAGVVLLGAFLTTVSKVHITALDKFFAVILIFLAVFAGWFVLDNFQEGIVQVRRALDPADRDAAIRGREILSLHKSILVASAVVLGWAVLFKLPL*
Ga0126383_1171205213300010398Tropical Forest SoilMSDQNRDNLTDKEKIDRAAWHEEVRFLKKQQWAVATAGVVLLSGLLAAIRDYHLTALDKFIVMVVVGLGVWCGWFFLDDLQCGLARVRRALDPADREAATRGGNIVNLHKAILVASA
Ga0134122_1192108413300010400Terrestrial SoilMAASNTRGPAMSDQNRVQLSDQEKIDRAAFHEEVRFYKKQQWAVATAGVVLLGTFLATVSDVHMTALDKFLAVVLIALGVCAGGYFLDNLQTGLADVRRRLDPSDHDAAIRGRDIMNLHKAILVGSALVVVWAVFKLP*
Ga0124844_105877133300010868Tropical Forest SoilMSDQATDNLSDKDKIDRAAQHEELRFYKKQQWAVTTAGVVLLGAFLTTVSKVHITALDKFFAVILIFLAVFAGWFVLDTFQEGIVQVRRALDPADRDAAIRGREILSLHKSILVASGVVVGWAVLFKLPR*
Ga0137368_1043574813300012358Vadose Zone SoilVQPFVQRIRALSERVQAMSDQNRGNLTDKEKIDRAAWLEEVRFLKKQQWAVATAGVVLLSGLLAAIRDYRLTALDKFIVVVVVGLGVWCGWFFLDGLQCGLAKVRRALYPADREAATRGGQIVNLHKAILVGSAAFVVWIVLWKLR*
Ga0137360_1046945713300012361Vadose Zone SoilMSDQANGNLSDKDKIDRAAQHEELRFYKKQQWAVTTAGVVLLGAFLTTVSKVHITALDKFFAVILIFLAVYAGWFVLDNFQEGIVKVRQALDPADRDAATRGREILSLHKSILVASAVVVGWAVLFKLPL*
Ga0150984_12096812213300012469Avena Fatua RhizosphereMSDQNRVQLSDQDKIDRASFPEEVRFYKKQQWAVATAGVVLLGAFLATIKDVQHMTTLDKIGAVVLITLGVCTGGYFLDSLQSGLANVRRTLDPSDSCAATRGLDIVYLHKTILVGSALVVVWAVFKLP*
Ga0126375_1106516123300012948Tropical Forest SoilMSNGNLSDKDKIDRAAQHEELRFYKKQQWAVTTAGAVLLGAFLTTVHNLHITALDKFLAVILICLAVCAGWFVLDNLQEGIVNVRRALDPADYDLAIRGREILNLHKVILVAT
Ga0164300_1080518213300012951SoilMSEQNRDELSDKDKIDRAAWHEEVRFLKKQQWAVATAGVILLGALLATIRNMHMTVLDKFLAVVLIAIGVYAGWLFLDDLQYGLADVRRWLDPADRDAATRGREILYLHKFILVASAVVVVWAVLFKLP*
Ga0164303_1035980713300012957SoilMSDQNRGELSDKDKIDRAARHEEVRLLKKQQCAVATAGVLLLGALLATIRNMHMTVLDKFLAVVLIAIGVYAGWLFLDDLQYGLADVRRWLDPADRDAATRGREILYLHKFILVASA
Ga0164303_1055941113300012957SoilEVRFLKKQQWAVATAGVLLFGALLATIRNMHMTVLDKFLAVVLIALGVYAGWLFLDDLQYSLADVRRWLDPADHDAATRGLEILHLHTFILVASAVVVVWAVLFKLP*
Ga0164299_1126092313300012958SoilMSEQNRDELSDKDKIDRAAWHEEVRFLKKQQWAVATAGVLLLGALLATIRNMHMTVLDKLLAVVLIAIGVYAGWLFLDDLQYGLADVRRWLDPADRDAATRGREILYLHKFILVASAVVVVWAVLFKLP*
Ga0164302_1026516423300012961SoilMSDQNRGELSDKDKIDRAARHEEIRFLKKQQWAVATAGVLLLGALLATIRNMHMTVLDKFLAVVLIAIGVYAGWLFLDDLQYGLADVRRWLDPADRDAATRGREILYLHKFILVASAVVVVWAVLFKLP*
Ga0126369_1033729023300012971Tropical Forest SoilRFYKKQQWAVTTAGVVLLGAFLTTVSKVHITALDKFFAVMLIFLAVFAGWFVLDTFQEGIVQVRRALDPADRDAAIRGREILSLHKSILVASGVVVGWAVLFKLPL*
Ga0126369_1156874413300012971Tropical Forest SoilMTDPNNDFSSSHSALDADTGFGVDQNRYGGALTDQEKEKIDRVAWHGQVQFLKRQQWAVATAGAVLSGAFLATINNYHMTPLDRFLAVLLLAAGVWAGWFFLDDLQCGLARVRRALDPADHEASTRGSPIVNLHKAILVASALVVAWAVLFKVR*
Ga0164309_1065300513300012984SoilPHRQGRTMVGLDPVGKAAVATLSYHECCLPLTKIARRDPKAMSEQNRDELSDKDKIDRAARHEEIRFLKKQQWAVATAGVLLLGALLATIRNMHMTVLDKFLAVVLIAIGVYAGWLFLDDLQYGLADVRRWLDPADRDAATRGREILYLHKFILVASAVVVVWAVLFKLP*
Ga0163162_1140591813300013306Switchgrass RhizosphereVSYENREELSDKDKIDRAAWHDEARFLKKHQWAISTAGVLLLAGLLAAIRNMHLTALDRFLAVVLIAIGVYVGWLFLDDLQYGLARLRRSLDPTDRGATIGGREILHLLKFILVVSALVVAWAVLFKLP*
Ga0163163_1156212013300014325Switchgrass RhizosphereVSYENRDELSDKDKIDRAAWHDEARFLKKQQWAIATAGVLLLAALLAAVRNIHLTALDRFLVVVLIAIGVYVGWLFLDELQYGLAKLRRLLDPTNRDATVSGREILHLLKFMLVASALVVVWAVLFKLP*
Ga0157376_1022117413300014969Miscanthus RhizosphereSDKDKIDRAAWHDEVRFLKKQQWAITIAGVLLLTGLLAAIRNMHLTVLDRFLAVMLIAIGVYVGWLFLDDLQYGLARLRRSLDPTDRGATIGGREILHLLKFILVVSALVVAWAVLFKLP
Ga0132256_10106156313300015372Arabidopsis RhizosphereVSYENRDELSDKDKIDRAAWYEEARFLKKQQWAIATAGVLLLAGLLAAVRNFHLTALDRFLAVVLVAIGVYVGWLFLDELQYGLAKFRRLLDPTDRDATVSGREILHLLKFMLVASALVVVWAVLFKLP*
Ga0132255_10301527413300015374Arabidopsis RhizosphereVSYENRDELSDKDKIDRAAWYDEARFLKKQQWAIATAGVLLLAGLLAGVRNFHLTALDRFLTVMLVAIGVYVGWLFLDELQYGLAKFRRLLDPTDRDATVSGREILHLLKFMLVASALVVVWAVLFKLP*
Ga0132255_10303629523300015374Arabidopsis RhizosphereMLLRYVALYLPLTRSRPERPRVVSYENRDELSDKDKIDRAAWHDEVRFLKKQQWAITTAGVLLLTGLLAAIRNMHLTALDRFLAVMLIAIGVYVGWLFLDDLQYGLARLRRSLDPTDRDATIRGREILHLLKFILVVSALVVAWAVLFKLP*
Ga0182041_1024515913300016294SoilMLLKNPGAQLCISHTRAVLDRDMSDQNRDNLTDKEKIDRAAWHEEVRFLKKQQWAVATAGVVLLSGLLAAIRDYHLTALDKFIVMVVVGLGVWCGWFFLDDLQCGLARVRRALDPADREAATRGGNIVNLHKAILVASAAVVVLWIVLFKVH
Ga0182035_1034049013300016341SoilMLLKNPGAQLCISHTRAVLDRDMSDQNRDNLTDKEKIDRAAWHEEVRFLKKQQWAVATAGVVLLSGLLAAIRDYHLTALDKFIVMVVVGLGVWCGWFFLDDLQCGLARVRRALDPADREAATRGGNIVNLHKAILVASAVVVGWAVVFKVR
Ga0182035_1055721813300016341SoilLHREAEAISDQNRDELSDKEKIDRAAYHEEVRFLKKQQWAVATAGVLLFGALLAAIRDMPTATALDRLLAALLVAAGVYGGCFFLDDLQDGLAKVRRSLDPNDHDAATRGVGVVRLFKSILVVSAVVVVWAVVFKLPIRR
Ga0182039_1173755323300016422SoilDQNRDTLSDQQKVDRAAWHEEVRFLKKQQWAVATAGAVLSGAFLATVNNYHMTPLDRFLAVVLLVGGVWAGWFYLDDLQCGLARVRRALDPDDDEAGTRGSPIVNLHKAILVASAVVVGWAVVFKVR
Ga0187802_1031010613300017822Freshwater SedimentMSDQNRGELSDKDKIDRAARHEEVRFLKKQQWAVATAGVLLLGALLATIRNMHMTVLDKFLAVVLIAIGVYAGWLFLDDLQYGLADVRRWLDPADRDAATRGREILYLHK
Ga0187817_1055000713300017955Freshwater SedimentMSDRNRGELSDKDKIDRAARHEEVRFLKKQQWAVATAGVLLLGALLATIRNMHMTVLDKFLAVVLIAIGVYAGWLFLDDLQYGLADVRRWLDPADRDAATRGREILYLHKFILVASAVVVVWAVLFKLP
Ga0190266_1037382813300017965SoilMSDQNRVQLSDQEKIDRAAFHEEVRFYKKQQWAVATAGVVLLGAFLATVSDVHMTALDKFLAVVLIALGVCAGGYFLDSLQTGLADVRRRLDPSDHDAAIRGRDIMNLHKAILVGSALVVVWAV
Ga0184611_115153913300018067Groundwater SedimentMSDQNRVQLSDQEKIDRAAFHEEVRFYKKQQWAVATAGVVLLGAILATVSDVHMTALDKFLAVVLIALGVCAGGYFLDSLQTGLANVRRRLDPSDHDAAIRGRDIMNLHKAILVGSALVVVWAVFKLP
Ga0187772_1025452613300018085Tropical PeatlandELSDRDKIDRAARHEEVRFLKKQQWAVATAGVLLLGALLSTIRNMHMTALDKFLAVVLIAIGVYAGWLFLDDLQYSLADLRRWLDPSDRDAATRGREILHLHKFILVASALVVVWAVLFKLP
Ga0190270_1152293513300018469SoilMSDQTRDTLSDLDIILDRAARHEEVRFLKKQQWAVATAGVVLAGAFLSTISNYHLTSLERFCAVLLTVGGVWAGWFFLDDLQGGLARVRRALDPADYSAPTRGSEIVNLHKLILVASAFVVVWAVLFKVR
Ga0190270_1322297913300018469SoilEKIDRAAFHEEVRFYKKQQWAVATAGVVLLGAFLATVDDVHMTALDKFLAVVLIALGVCAGGYFLDNLQTGLADVRRRLDPSDHDAAIRGRDIMNLHKAILVGSALVVVWAVFKLP
Ga0066669_1053519013300018482Grasslands SoilMSDQNRGELSDKDKIDRAARHEEVRFLKKQQWAVATAGVLLLGALLATIRNMHMTVLDKFLAVVLIAIGVYAGWLFLDDLQYGLADVRRWLDPADRDAATRGREILYLHKFILVASAVVVVWAVLFKLP
Ga0193696_102595213300020016SoilMSDQNRVQLSDQEKIDRAAFHEEVRFYKKQQWAVATAGVVLLGAFLATVNDVHMTALDKFLAVVLIALGVCAGGYFLDSLQTGLADVRRRLDPSDHDAAIRGRDIMNLHKAILVGSALVVVWAVFKLP
Ga0210403_1040140913300020580SoilMSDQNRGELSDKDKIDRAARHEEVRFLKKQQWAVATAGVLLLGALLATIRNIHMTVLDKFLAVVLIAIGVYAGWLFLDDLQYGLADVRRWLDPADRDAATRGREILYLHKFILVASAVVVVWAVLFKLP
Ga0210399_1087742413300020581SoilMSDQNNGDLTDKEKIDRVAWHEEVRFLKKQQWAVATAGVVLFGGFLATIRNYHMTPLDKFLAVLLITIGACFGWWFLDDLQCGLAKVRRALDPADRAATTRGREIVYLHKAILVASAAVVVWAVLFKLS
Ga0210380_1035599823300021082Groundwater SedimentMSDQNRVQLSDQEKIDRAAFHEQVRFYKKQQWAVATAGVVLLGAFLATVNDVHMTALDKFLAVVLIALGVCAGGYFLDNLQTGLADVRRRLDPSDHDAAIRGRDIMNLHKAILVGSALVVVWAVFKLP
Ga0210404_1035828413300021088SoilMSDQNRGELSDKDKIDRAARHEEVRFLKKQQWAVATAGVLLLGALLATIRNMHMTVLDKFLAVVLIAIGVYAGWLFLDDLQYGLADVRRWLDPADRDAATRGREILYLHKFILVASAVVAVWAVLFKLP
Ga0210406_1027015623300021168SoilMSDQNRGELSDKDKIDRAARHEEVRFLKKQQWAVATAGVLLLGALLATIRNMHMTVLDKFLAVVLIAIGVYAGWLFLDDLQYGLADVRRWLDPADREAANRGREILYLHKFILVASAVVVVWAVLFKLP
Ga0210408_1049101023300021178SoilMSDQNNGDLTDKEKIDREAWHEEVRFLKKQQWAVATAGVVLFGGFLATIRNYHMTPLDKFLAVLLITIGACFGWWFLDDLQCGLAKVRRALDPADRAATTRGREIVYLHKAILVASAAVVVWAVLFKLS
Ga0210402_1153473513300021478SoilVSYENREELSDKDKIDRAAWHDEVRFLKKQQWAIATAGVLLLTGLLAAIRNMHLTALDRFLAVMLIAIGVYVGWLFLDDLQYGLARLRRSLGPTDRDATIGGREILHLLKFILVVSALVVAWAVLFKLP
Ga0210410_1058583123300021479SoilMSDQNRGELSDKDKIDRAARHEEVRFLKKQQWAVATAGVILLGALLATIRNMHLTVLDKFLAVVLIAIGVYAGWLFLDDLQYGLADVRRWLDPADRDAATRGREILYLHKFILVASAVVVVWAVLFKLP
Ga0210410_1092451323300021479SoilMSDQNNGDLTDKEKIDREAWHEEVRFLKKQQWAVATAGVVLFGGFLATIRNYHMTPLDKFLAVLLITIGACFGWWFLDDLQCGLAKVRRALDPADREATTRGREIVYLHKAILVASAAVVVWAVLFKLS
Ga0222621_109489413300021510Groundwater SedimentRRVPTRQLSDEEKIDRAAFHGVVRFYKKQQWAVATAGVVLLGAFLATVSDVHMTALDKFLAVVLIALGVCAGGYFLDSLQTGLANVRRRLDPSDHDAAIRGRDIMNLHKAILVGSALVVVWAVFKLP
Ga0210409_1119088313300021559SoilMSDQNRGELSDKDKIDRAARHEEVRFLKKQQWAVATAGVLLLGALLATIRNMHMTVLDKFLAVVLIAIGVYAGWLFLDDLQYGLADVRRWLDPADREAANRGREIL
Ga0126371_1069772133300021560Tropical Forest SoilMDQNRDNLTDKEKIDRAVDRAAWREEVRFLKKQQWAVATAGVVLLSGLLAVIRNYHLTASDKAIVVVVIGLGVWCGWFFLDDLQRGLAVVRRALYPSDYAASTRGQEIV
Ga0126371_1153237723300021560Tropical Forest SoilMSDQNRGGLTDQEKIDRAARHEEVRFLKRQQWAVATAGAVLSGAFLATINNYHMTPLDRFLAVLLLAAGVWAGWFFLDDLQCGLARVRRALDPADHEAATRGSPIVNLHKAILVASALVVAWAVLFKVR
Ga0212123_1014413023300022557Iron-Sulfur Acid SpringMSGQNRDELSDKDKIDRAARHEEVRFLKKQQWAVATAGVLLLGALLATIRNMHMTVLDKFLAVVLIAVGVYAGWLFLDDLQYRLADVRRWLDPADHDAATRGREILHLHKFILVASAVVVVWAVLFKLP
Ga0207692_1117186113300025898Corn, Switchgrass And Miscanthus RhizosphereMSDKDKEIIDRAALHEEARFLKKQQWAVASAGVILFGGFLATIRGEHMSTLEKFLAVVLIAVGVWAGWFFLDDLQNGLAGVRRKLNPADCAAETRGSEILNLHKGILVASALVVAWVVLFKVR
Ga0257156_107032513300026498SoilMSDQANGNLSDKDKIDRAAQHEELRFYKKQQWAVTTAGVVLLGAFLTTVSKVHITALDKFFAVILIFLAVYAGWFVLDNFQEGIVKVRQALDPADRDAATRGREILSLHKSILVASAVVV
Ga0209465_1006475223300027874Tropical Forest SoilMSDQNRDNLTDKEKIDRAVDRAAWREEVRFLKKQQWAVATAGVVLLSGLLAAIRDYHLTALDKFIVVVVIGLGVWCGWFFLDDLQRGLAVVRRALYPSDYAASTRGQEIVNLHKAILVGSAAFVVWIILFKVR
Ga0307307_1018743213300028718SoilMSDQNRVQLSDQEKIDRAAFHEEVRFYKKQQWAVATAGVVLLGAFLATVNDVHMTALDKFLAVVLIALGVCAGGYFLDSLQTGLADVRRRLDPSDNDAAIRGRDIMNLHKAILVGSALVVVWAVFKLP
Ga0307317_1012002313300028720SoilAMSDQNRVQLSDQEKIDRAAFHEEVRFYKKQQWAVATAGVVLLGAFLATVNDVHMTALDKFLAVVLIALGVCAGGYFLDSLQTGLADVRRRLDPSDHDAAIRGRDIMNLHKAILVGSALVVVWAVFKLP
Ga0307312_1026963733300028828SoilMSDQNRVQLSDQEKIDRAAFHEEVRFYKKQQWAVATAGVVLLGAFLATVNDVRMTALDKFLAVVLIALGVCAGGYFLDSLQTGLADVRRRLDPSDHDAAIRGRDIMNLHKAILVGSALVVVWAVFKLP
Ga0307286_1025973713300028876SoilEELRFYKKQQWAVATAGVVLLGAFLATVSDVHMKALDKFLAVVLIALGVCAGGYFLDSLQTGLADVRRRLDPSDHDAAIRGRDIMNLHKAILVGSALVVVWAVFKLP
Ga0307498_1037157413300031170SoilGESSDKDKIDRAARHEEVRFLKKQQWAVATAGVLLLGALLATIRNMHMTVLDKFLAVVLIAIGVYAGWLFLDDLQYGLADVRRWLDPADRDAATRGREILYLHKFILVASAVVVVWAVLFKLP
Ga0318516_1070187613300031543SoilMSDQATDNLSDKDKIDRAAQHEELRFYKKQQWAVTTAGVVLLGAFLTTVSKVHITALDKFFAVILIFLAVFAGWFVLDNFQEGIVQVRRALDPADRDAAIRGREILSLHKSILVASAVVVGWAVLFKLPL
Ga0310915_1043665223300031573SoilMSDQNRDTLSDQQKVDRAAWHEEVRFLKKQQWAVATAGAVLSGAFLATVNNYHMTPLDRFLAVVLLVGGVWAGWFYLDDLQCGLARVRRALDPDDDEAGTRGSPIVNLHKAILVASAVVVGWAVVFKVR
Ga0310915_1063878113300031573SoilVGMLLKNPGAQLCISHTRAVLDRDMSDQNRDNLTDKEKIDRAAWHEEVRFLKKQQWAVATAGVVLLSGLLAAIRDYHLTALDKFIVMVVVGLGVWCGWFFLDDLQCGLARVRRALDPADREAATRGGNIVNLHKAILVASAAVVVLWIVLFKVH
Ga0318542_1032426513300031668SoilMSDQNRDNLTDKEKIDRAAWHEEVRFLKKQQWAVATAGVVLLSGLLAAIRDYHLTALDKFIVMVVVGLGVWCGWFFLDDLQCGLARVRRALDPADREAATRGGNIVNLHKAILVASAAVVVLWIVLFKVH
Ga0318574_1040008523300031680SoilLKNPGAQLCISHTRAVLDRDMSDQNRDNLTDKEKIDRAAWHEEVRFLKKQQWAVATAGVVLLSGLLAAIRDYHLTALDKFIVMVVVGLGVWCGWFFLDDLQCGLARVRRALDPADREAATRGGNIVNLHKAILVASAAVVVLWIVLFKVH
Ga0318493_1058749723300031723SoilAARHEEVRFLKRQQWAVATAGAVLSGAFLATINNYHMTPLDRFLAVLLLAAGVWAGWFFLDDLQCGLARVRRALDPADHEAATRGSPIVNLHKAILVASALVVAWAVLFKVR
Ga0306918_1062474813300031744SoilMSDQANGNLSDKDKIDRVAQHEELRFYKKQQWAVTTAGVVLLGAFLTTVSKVHITALDKFFAVILISLAVCAGWFVLDNFQEGIVKVRCALDPADRDAAIRGREILSLHKSILVASAVVVGWAVL
Ga0306918_1116392513300031744SoilAWHEEVRFLKKQQWAVATAGVVLLSGLLAAIRDYHLTALDKFIVMVVVGLGVWCGWFFLDDLQCGLARVRRALDPADREAATRGGNIVNLHKAILVASAAVVVLWIVLFKVH
Ga0318521_1052623213300031770SoilVFLRSFRERTRSSVGMLLKNPGAQLCISHTRAVLDRDMSDQNRDNLTDKEKIDRAAWHEEVRFLKKQQWAVATAGVVLLSGLLAAIRDYHLTALDKFIVMVVVGLGVWCGWFFLDDLQCGLARVRRALDPADREAATRGGNIVNLHKAILVASAAVVVLWIVLFKVH
Ga0318546_1055380013300031771SoilMSDQNRDNLTDKEKIDRAAWHEEVWFLKKQQWAVATAGVVLLSGLLAAIRDYHLTALDKFIVMVVVGLGVWCGWFFLDDLQCGLARVRRALDPADREAATRGGNIVNLHKAILVASAAVVVLWIVLFKVH
Ga0307473_1099760113300031820Hardwood Forest SoilMPDQANGNLSDKDKIDRAAQHEELRFYKKQQWAVTTAGVVLLGAFLTIVRDVHITALDKFLAVILIFLAAWAGWFVLDDLQEGVVKVRRALDPSDRDAAIRGREILGLHKSILVAQRSARLFPAVNS
Ga0306919_1117928123300031879SoilMSDQNRDTLSDQQKVDRAAWHEEVRFLKKQQWAVATAGAVLSGAFLATVNNYHMTPLDRFLAVVLLVGGVWAGWFYLDDLQCGLARVRRALDPDDDEAGTRGSPIVNLHKAILVASAVVVGWAVVFK
Ga0306922_1132986913300032001SoilSSVGMLLKNPGAQLCISHTRAVLDRDMSDQNRDNLTDKEKIDRAAWHEEVWFLKKQQWAVATAGVVLLSGLLAAIRDYHLTALDKFIVMVVVGLGVWCGWFFLDDLQCGLARVRRALDPADREAATRGGNIVNLHKAILVASAAVVVLWIVLFKVH
Ga0306922_1153564423300032001SoilMSDQNRDELSDKEKIDRAAYHEEVRFLKKQQWAVATAGVLLFGALLAAIRDMPTATALDRLLAVVLVAAGVYGGCFFLDDLQDGLAKVRRALDPNDHDAATRGVGVVRLFKSILVVSAVVVVWAVVFKLPIRR
Ga0318507_1045015013300032025SoilSHTRAVLDRDMSDQNRDNLTDKEKIDRAAWHEEVRFLKKQQWAVATAGVVLLSGLLAAIRDYHLTALDKFIVMVVVGLGVWCGWFFLDDLQCGLARVRRALDPADREAATRGGNIVNLHKAILVASAAVVVLWIVLFKVH
Ga0318505_1005480633300032060SoilMSDQATDNLSDKDKIDRAAQHEELRFYKKQQWAVTTAGVVLLGAFLTTVSKVHITALDKFFAVILIFLAVFAGWFVLDNFQEGIVQVRRALYPADRDAAIRGREILSLHKCILVAAAVVVGWAVLFKLPL
Ga0307471_10037874823300032180Hardwood Forest SoilMPDQANGNLSDKDKIDRAAQHEELRFYKKQQWAVTTAGVVLLGAFLTIVRDVHITALDKFLAVILIFLAAWAGWFVLDDLQEGVVKVRRALDPSDRDAAIRGREILGLHKSILVATALVVGWAVLFKLPV
Ga0318519_1078224913300033290SoilMSDQNRDNLTDKEKIDRAAWHEEVWFLKKQQWAVATAGVVLLSGLLAAIRDYHLTALDKFIVMVVVGLGVWCGWFFLDDLQCGLARVRRALDPADREAATRGGNIVNLHKAILVASAAVV


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.