NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F079854

Metagenome / Metatranscriptome Family F079854

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F079854
Family Type Metagenome / Metatranscriptome
Number of Sequences 115
Average Sequence Length 52 residues
Representative Sequence VRSHWDGKDVGMMRDRVAAYKAAGVQHVMVHPQDREVDDWDTVIEGVGRVAAG
Number of Associated Samples 103
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 98.26 %
% of genes from short scaffolds (< 2000 bps) 93.04 %
Associated GOLD sequencing projects 97
AlphaFold2 3D model prediction Yes
3D model pTM-score0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (80.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(28.696 % of family members)
Environment Ontology (ENVO) Unclassified
(35.652 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(39.130 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 32.10%    β-sheet: 13.58%    Coil/Unstructured: 54.32%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.64
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 115 Family Scaffolds
PF00583Acetyltransf_1 12.17
PF05726Pirin_C 12.17
PF04140ICMT 6.09
PF00296Bac_luciferase 4.35
PF13356Arm-DNA-bind_3 2.61
PF01850PIN 2.61
PF00291PALP 2.61
PF00561Abhydrolase_1 2.61
PF00106adh_short 1.74
PF00581Rhodanese 1.74
PF13701DDE_Tnp_1_4 1.74
PF07969Amidohydro_3 1.74
PF13361UvrD_C 1.74
PF13676TIR_2 1.74
PF00496SBP_bac_5 0.87
PF02602HEM4 0.87
PF00903Glyoxalase 0.87
PF01738DLH 0.87
PF13545HTH_Crp_2 0.87
PF01402RHH_1 0.87
PF04191PEMT 0.87
PF12146Hydrolase_4 0.87
PF00264Tyrosinase 0.87
PF00128Alpha-amylase 0.87
PF02798GST_N 0.87
PF04909Amidohydro_2 0.87
PF13533Biotin_lipoyl_2 0.87
PF10282Lactonase 0.87
PF13649Methyltransf_25 0.87
PF02678Pirin 0.87
PF12697Abhydrolase_6 0.87
PF00015MCPsignal 0.87

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 115 Family Scaffolds
COG1741Redox-sensitive bicupin YhaK, pirin superfamilyGeneral function prediction only [R] 13.04
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 4.35
COG0840Methyl-accepting chemotaxis protein (MCP)Signal transduction mechanisms [T] 1.74
COG02961,4-alpha-glucan branching enzymeCarbohydrate transport and metabolism [G] 0.87
COG0366Glycosidase/amylase (phosphorylase)Carbohydrate transport and metabolism [G] 0.87
COG1523Pullulanase/glycogen debranching enzymeCarbohydrate transport and metabolism [G] 0.87
COG1587Uroporphyrinogen-III synthaseCoenzyme transport and metabolism [H] 0.87
COG3280Maltooligosyltrehalose synthaseCarbohydrate transport and metabolism [G] 0.87

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms80.87 %
UnclassifiedrootN/A19.13 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001305|C688J14111_10243800All Organisms → cellular organisms → Bacteria → Proteobacteria563Open in IMG/M
3300001661|JGI12053J15887_10144454All Organisms → cellular organisms → Bacteria1254Open in IMG/M
3300004092|Ga0062389_102272052All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria715Open in IMG/M
3300005184|Ga0066671_11002861All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium525Open in IMG/M
3300005187|Ga0066675_10534069All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria879Open in IMG/M
3300005329|Ga0070683_100727284All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria951Open in IMG/M
3300005364|Ga0070673_100517728All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1081Open in IMG/M
3300005468|Ga0070707_102169132All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria523Open in IMG/M
3300005841|Ga0068863_100832791All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria921Open in IMG/M
3300005843|Ga0068860_101494243All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria697Open in IMG/M
3300006028|Ga0070717_11265218Not Available671Open in IMG/M
3300006032|Ga0066696_10132832All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1535Open in IMG/M
3300006046|Ga0066652_100776312All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria915Open in IMG/M
3300006796|Ga0066665_10860183All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium707Open in IMG/M
3300006800|Ga0066660_10185058All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1575Open in IMG/M
3300006800|Ga0066660_11325987Not Available563Open in IMG/M
3300009090|Ga0099827_10684800All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria886Open in IMG/M
3300009090|Ga0099827_11816847Not Available531Open in IMG/M
3300009094|Ga0111539_11850312All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria700Open in IMG/M
3300009137|Ga0066709_104458862All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales511Open in IMG/M
3300009444|Ga0114945_10765233All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales591Open in IMG/M
3300010044|Ga0126310_11650736All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria531Open in IMG/M
3300010048|Ga0126373_13029646All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria524Open in IMG/M
3300010159|Ga0099796_10274979All Organisms → cellular organisms → Bacteria707Open in IMG/M
3300010360|Ga0126372_12584880All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria559Open in IMG/M
3300010379|Ga0136449_103611862All Organisms → cellular organisms → Bacteria → Proteobacteria586Open in IMG/M
3300010401|Ga0134121_11221509All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria752Open in IMG/M
3300011120|Ga0150983_13279677Not Available509Open in IMG/M
3300011270|Ga0137391_10374718All Organisms → cellular organisms → Bacteria1220Open in IMG/M
3300011270|Ga0137391_10656813All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria875Open in IMG/M
3300012096|Ga0137389_11141475All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium667Open in IMG/M
3300012177|Ga0153943_1117434All Organisms → cellular organisms → Bacteria → Proteobacteria573Open in IMG/M
3300012189|Ga0137388_10817268All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria863Open in IMG/M
3300012212|Ga0150985_109554485All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria648Open in IMG/M
3300012212|Ga0150985_115207893All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria502Open in IMG/M
3300012469|Ga0150984_102901956All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria520Open in IMG/M
3300012469|Ga0150984_108126337All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium556Open in IMG/M
3300012925|Ga0137419_11851844All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria517Open in IMG/M
3300012985|Ga0164308_11657355All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria592Open in IMG/M
3300015374|Ga0132255_104448553All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria594Open in IMG/M
3300016270|Ga0182036_11022967All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria682Open in IMG/M
3300016294|Ga0182041_10607246All Organisms → cellular organisms → Bacteria962Open in IMG/M
3300016357|Ga0182032_10754937All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria820Open in IMG/M
3300016371|Ga0182034_10454505Not Available1061Open in IMG/M
3300016371|Ga0182034_10773195All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria820Open in IMG/M
3300016404|Ga0182037_10438749All Organisms → cellular organisms → Eukaryota1083Open in IMG/M
3300016422|Ga0182039_10033505All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD00883334Open in IMG/M
3300016422|Ga0182039_10147580All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1816Open in IMG/M
3300017932|Ga0187814_10137183All Organisms → cellular organisms → Bacteria → Proteobacteria910Open in IMG/M
3300017970|Ga0187783_11324125All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300017973|Ga0187780_10724537All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales718Open in IMG/M
3300018089|Ga0187774_11317800All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales524Open in IMG/M
3300020580|Ga0210403_10082301All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD00882596Open in IMG/M
3300020580|Ga0210403_10122946All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2113Open in IMG/M
3300021178|Ga0210408_10128780All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1999Open in IMG/M
3300021344|Ga0193719_10124645All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1119Open in IMG/M
3300021358|Ga0213873_10121724All Organisms → cellular organisms → Bacteria767Open in IMG/M
3300021953|Ga0213880_10152171All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales632Open in IMG/M
3300022722|Ga0242657_1137410All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales634Open in IMG/M
3300025926|Ga0207659_11341042Not Available614Open in IMG/M
3300025930|Ga0207701_10725903All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria840Open in IMG/M
3300025960|Ga0207651_11334023All Organisms → cellular organisms → Bacteria645Open in IMG/M
3300025961|Ga0207712_11839659All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria542Open in IMG/M
3300026550|Ga0209474_10048395All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3054Open in IMG/M
3300027725|Ga0209178_1342478All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300027824|Ga0209040_10168147All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD00881167Open in IMG/M
3300027869|Ga0209579_10526070All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales642Open in IMG/M
3300027875|Ga0209283_10559106All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300027903|Ga0209488_10188713All Organisms → cellular organisms → Bacteria1554Open in IMG/M
3300028047|Ga0209526_10249567All Organisms → cellular organisms → Bacteria → Proteobacteria1215Open in IMG/M
3300028801|Ga0302226_10394131All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300028906|Ga0308309_10164104All Organisms → cellular organisms → Bacteria → Proteobacteria1800Open in IMG/M
3300031057|Ga0170834_109979616Not Available1276Open in IMG/M
3300031231|Ga0170824_116747372All Organisms → cellular organisms → Bacteria → Proteobacteria642Open in IMG/M
3300031231|Ga0170824_121851942Not Available623Open in IMG/M
3300031236|Ga0302324_102335379All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria659Open in IMG/M
3300031543|Ga0318516_10089687Not Available1725Open in IMG/M
3300031543|Ga0318516_10263657All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria996Open in IMG/M
3300031545|Ga0318541_10587386All Organisms → cellular organisms → Bacteria → Proteobacteria623Open in IMG/M
3300031561|Ga0318528_10682010Not Available550Open in IMG/M
3300031708|Ga0310686_107034988Not Available642Open in IMG/M
3300031713|Ga0318496_10364785Not Available798Open in IMG/M
3300031719|Ga0306917_10208461All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae1483Open in IMG/M
3300031724|Ga0318500_10375086All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300031747|Ga0318502_10087743All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD00881705Open in IMG/M
3300031751|Ga0318494_10598278Not Available645Open in IMG/M
3300031770|Ga0318521_10267053All Organisms → cellular organisms → Bacteria1002Open in IMG/M
3300031781|Ga0318547_10173069All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1280Open in IMG/M
3300031782|Ga0318552_10011864All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales3663Open in IMG/M
3300031796|Ga0318576_10122208Not Available1202Open in IMG/M
3300031820|Ga0307473_11331677All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300031835|Ga0318517_10178023All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria955Open in IMG/M
3300031845|Ga0318511_10242196All Organisms → cellular organisms → Bacteria808Open in IMG/M
3300031845|Ga0318511_10326955Not Available696Open in IMG/M
3300031860|Ga0318495_10378845Not Available625Open in IMG/M
3300031879|Ga0306919_10206083All Organisms → cellular organisms → Bacteria1464Open in IMG/M
3300031880|Ga0318544_10049643Not Available1512Open in IMG/M
3300031912|Ga0306921_11719219Not Available678Open in IMG/M
3300031945|Ga0310913_10225247All Organisms → cellular organisms → Bacteria1314Open in IMG/M
3300031954|Ga0306926_10049494All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales5022Open in IMG/M
3300032010|Ga0318569_10603598All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales511Open in IMG/M
3300032025|Ga0318507_10244760Not Available778Open in IMG/M
3300032039|Ga0318559_10010398All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD00883304Open in IMG/M
3300032039|Ga0318559_10120134All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD00881178Open in IMG/M
3300032041|Ga0318549_10190999Not Available918Open in IMG/M
3300032052|Ga0318506_10239011All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria804Open in IMG/M
3300032059|Ga0318533_10508212Not Available883Open in IMG/M
3300032060|Ga0318505_10002656All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales5363Open in IMG/M
3300032066|Ga0318514_10088156All Organisms → cellular organisms → Bacteria1559Open in IMG/M
3300032068|Ga0318553_10285922All Organisms → cellular organisms → Bacteria → Proteobacteria862Open in IMG/M
3300032089|Ga0318525_10402610All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria701Open in IMG/M
3300032205|Ga0307472_100476064All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD00881069Open in IMG/M
3300032892|Ga0335081_10915775All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1032Open in IMG/M
3300033134|Ga0335073_11976518Not Available535Open in IMG/M
3300033829|Ga0334854_117867All Organisms → cellular organisms → Bacteria639Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil28.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil10.43%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.61%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.61%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.61%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.61%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.74%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.74%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.74%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.74%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.74%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa1.74%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.74%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.74%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.74%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere1.74%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.87%
Thermal SpringsEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs0.87%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.87%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.87%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.87%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.87%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.87%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.87%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.87%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.87%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.87%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.87%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.87%
Exposed RockEnvironmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock0.87%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.87%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.87%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.87%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.87%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.87%
Attine Ant Fungus GardensHost-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens0.87%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001305Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009444Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3EnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012177Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ027 MetaGHost-AssociatedOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017932Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4EnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300018089Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MGEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300021358Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3Host-AssociatedOpen in IMG/M
3300021953Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R07EnvironmentalOpen in IMG/M
3300022722Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300027725Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027824Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027869Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028801Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031561Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031713Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031724Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20EnvironmentalOpen in IMG/M
3300031747Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031782Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20EnvironmentalOpen in IMG/M
3300031796Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031835Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21EnvironmentalOpen in IMG/M
3300031845Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18EnvironmentalOpen in IMG/M
3300031860Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031880Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032010Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22EnvironmentalOpen in IMG/M
3300032025Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20EnvironmentalOpen in IMG/M
3300032039Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21EnvironmentalOpen in IMG/M
3300032041Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22EnvironmentalOpen in IMG/M
3300032052Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032060Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18EnvironmentalOpen in IMG/M
3300032066Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032089Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M
3300033829Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C688J14111_1024380013300001305SoilKDVVEMKERVAAYREVGVQHIMVHPQDREVDDWDTVIDGVGKVAAGF*
JGI12053J15887_1014445443300001661Forest SoilGFTISVRSHWDGRDVSMMKERVAAYADAGVQHIMVHPQDREVDDWDTVLDAVGKLAG*
Ga0062389_10227205213300004092Bog Forest SoilFTISVRSHWDGKDVGMMRDRVAAYEAAGVQHVMVHPQDREIDDWDEVIEGVGRLAAG*
Ga0066671_1100286113300005184SoilWDGKDVGMMKERVAAYAEAGVRHIMVHPQDREVDDWDTVLESVGKLAG*
Ga0066675_1053406923300005187SoilIRSHWDGKDVGMMKERVAAYAEAGVQHIMVHPQDREVDDWDTVIEGVGRVAAN*
Ga0070683_10072728413300005329Corn RhizosphereTISIRSHWDGKDVGMMKERVAAYAEAGVQHIMVHPQDREIDDWDTVIEGVGKVAAA*
Ga0070673_10051772823300005364Switchgrass RhizosphereFTISVRTHWAGKDVGELQERIAAYEAAGVQHVMVHPLDREVDEWDEVIEGVGKAAAG*
Ga0070707_10216913213300005468Corn, Switchgrass And Miscanthus RhizosphereRSHWDGKDVGMMRERVAAYAAAGVQHVMVHPQDREVDDWDTVIEGVGRLATG*
Ga0068863_10083279123300005841Switchgrass RhizosphereDVGMMKERVTAYEDASVQHIMVHPQDREVDDWDTVIAGVGKVAAD*
Ga0068860_10149424323300005843Switchgrass RhizosphereFTISIRSHWDGRDVGMMKERVAAYEDAGVQHIMVHPQDREVDDWDTVIAGVGKVAAD*
Ga0070717_1126521813300006028Corn, Switchgrass And Miscanthus RhizosphereWDGKDVGMMKERVAAYAEAGVQHIMVHPQDREIDDWDTVIEGVGKLAAA*
Ga0066696_1013283233300006032SoilSHWDGKDVGMMKERVAAYAEAGVQHIMVHPQDREIDDWDTVIEAVGKLAAG*
Ga0066652_10077631213300006046SoilGRDVGEMKERVAAYREVGVQHIMVHPQDREVDDWDTVIEGVGKVAAEF*
Ga0066665_1086018323300006796SoilGEDIGMMRERVAAYSAAGVQHVMVHPQDREIDDWDTVIEGVGRLAAN*
Ga0066660_1018505843300006800SoilVRSHWDGRDIGMMKERVAAYAEAGVQHIMVHPQDREIDDWDTVLDAVGKLAG*
Ga0066660_1132598713300006800SoilVRSHWDGRDIGMMKERVAAYAEAGVQHIMVHPQDREIDDWDTVLDAVGKLAAG*
Ga0099827_1068480013300009090Vadose Zone SoilRSHWDGRDVGMMKERVAAYAEAGVQHVMVHPQDREVDDWDIVIEGVGQVAAA*
Ga0099827_1181684713300009090Vadose Zone SoilRSHWDGKDIGLMKERVAAYEDAGVQHIMVHPQDREVDDWDDVIEGVGRVAAG*
Ga0111539_1185031213300009094Populus RhizosphereHWDGRDVAMMKERVAAYEDAGVQHIMVHPQDREVDDWDTVIAGVGKVAAD*
Ga0066709_10445886223300009137Grasslands SoilSHWDGKDVGMMRERVAAYEAAGVQHVMIHPQDREVDDWDTVIEGVGRVAAG*
Ga0114945_1076523313300009444Thermal SpringsKDIGMMKGRVAAYAEAGVQHIMVHPQDREIDDWDTVIEGVGRVATG*
Ga0126310_1165073623300010044Serpentine SoilSVRSHWDGKDVGMMKERVAAYEDAGVQHVMVHPQDREVDDWDTVIEGVGKVATG*
Ga0126373_1302964623300010048Tropical Forest SoilFTISVRSHWDGKDVGAMRERVAAYEAAGVQHVMVHPQDREVDDWDEVIEGVGRLATG*
Ga0099796_1027497913300010159Vadose Zone SoilSHWDGRDIGMMKERVAAYAEAGVQHIMVHPQDREVDDWDTVIEGVGKVAAG*
Ga0126372_1258488013300010360Tropical Forest SoilHWDGKDVSMMRDRVAAYKAAGVQHVMVHPQDREIDDWDTVIEGVGRIAAG*
Ga0136449_10361186223300010379Peatlands SoilSHWDGKDVGMMKDRVAAYAAAGVQHVMVHPQDREVDDWDTVIEGVGKLI*
Ga0134121_1122150913300010401Terrestrial SoilHWDGRDVGMMKERVAAYADAGVQHIMVHPQDREVDDWDTVIEGVGRVMAAA*
Ga0150983_1327967713300011120Forest SoilKDVGMMRDRVAAYEAAGVQHVMVHPQDREVDDWDTVIEGVGRVAGG*
Ga0137391_1037471813300011270Vadose Zone SoilDGKDIGMMKERGAAHAEAGVQHIMVHPQDREVDDWDTVIEGVGKVAAG*
Ga0137391_1065681313300011270Vadose Zone SoilVRSHWDGKDVGMMRDRVAAYEAAGVQHVMVHPQDREIDDWDTVIEGIGRVAAG*
Ga0137389_1114147523300012096Vadose Zone SoilWDGRDVGMMKERVAAYAEAGVQHIMVHPQDREVDDWDTVIEGVGRVAAG*
Ga0153943_111743413300012177Attine Ant Fungus GardensHWDGKDVGMMKERVAAYRDAGVQHIMVHPQDREVDDWDAVIEGVGKVAAG*
Ga0137388_1081726823300012189Vadose Zone SoilVRSHWNGKDIGMMRERVAAYEAAGVQHVMVHPQDREIDDWDTVIEGVGRVAAG*
Ga0150985_10955448523300012212Avena Fatua RhizosphereVRSHWDGKDAGMMKERVASYAEAGVQHIMVHPQDREVDDWDTVIEGVGKVAAG*
Ga0150985_11520789323300012212Avena Fatua RhizosphereWDGRDVGMMKERVAAYAEAGVQHIMVHPQDREVDDCETVIDGVGKIAIG*
Ga0150984_10290195613300012469Avena Fatua RhizosphereWDGRDIGMMKERVAAYEDAGVQHIMVHPQDREVDDWNTVIEGVGKVATG*
Ga0150984_10812633723300012469Avena Fatua RhizosphereTVSIRSHWDGKDVGMMKERVAAYAAAGVQHIMVHPQDREIDDWDTVIEGTGKVAAG*
Ga0137419_1185184423300012925Vadose Zone SoilDGKDVGMMRERVAAYAAAGVQHVMVHPQDREVDDWDTVIEGVGRLTTG*
Ga0164308_1165735513300012985SoilHWDGRDVGMMKERVAAYEDAGVQHIMGHPQDREVDDWDTVIAGVGKVAAD*
Ga0132255_10444855313300015374Arabidopsis RhizosphereWDGRDVAIMKERVAAYEDAGVQHIMVHPQDREADDWDTAIAGVGKVAAD*
Ga0182036_1102296723300016270SoilGFTISVRSHWDGKDVSMMRDRVAAYKAAGVQHVMVHPQDREVDDWDNVIEGVGRVAAG
Ga0182041_1060724623300016294SoilQPHFTISVRAPRRGRHAGLTRDRVAASGAAGVQHVMVHPQDHEVDDWDEVIEGVGRLATG
Ga0182032_1075493723300016357SoilDGDDVGMMRDRVVAYAAAGVQHVMVHPQDREVDDWDTVIEGVGRVAAG
Ga0182034_1045450513300016371SoilHWDGKDVGMMRERVAAYEAAGVQHVMVHPHDREVDDWDTVIEGVGRVASG
Ga0182034_1077319523300016371SoilWDGKDVGMMRDRVAAYEAAGVQHVMVHPQDREVDDWDTVIEGVGRVATA
Ga0182037_1043874913300016404SoilKDVGMMRDRVAAYEAAGVQHVMVHPQDREVDDWDTVIEGVGCLAVG
Ga0182039_1003350513300016422SoilGFTISVRSHWDGKDIGMMRDRVAAYEAAGVQHVMVHPQDREVDDWDTVIEGVGRVATG
Ga0182039_1014758043300016422SoilSVRSHWDGKDVGVMRDRVAAYKAAGVQHVMVHPQDREVDDWDTVIEGVGRIAAG
Ga0187814_1013718333300017932Freshwater SedimentVRSHWDGKDIGMMKERVAAYAAAGVQHVMVHPQDREVDDWNAVIEGVGKLI
Ga0187783_1132412523300017970Tropical PeatlandGKDIGMAKERIAAYAAAGVQHVMIHPHNHEVDDWDTVIEGVGRLAAG
Ga0187780_1072453713300017973Tropical PeatlandYHWDGKDIGMMKERVAAYGEAGVQHIMVHPQDREVDDWDTVIEGVGRLAAT
Ga0187774_1131780013300018089Tropical PeatlandSFTISVRSHWDGKDAGMMKERVAAYAAAGVQHIMVHPQDREVDDWDTVIAGVGKLI
Ga0210403_1008230153300020580SoilVRSHWDGKDVGMMRDRVAAYKAAGVQHVMVHPQDREVDDWDTVIEGVGRVAAG
Ga0210403_1012294643300020580SoilHWDGKDVGMMRDRVAGYEAAGVQHVMVHPQDREVDDWDTVIEGVGRVAAG
Ga0210408_1012878013300021178SoilISVRSHWDGKDVGMMRDRVAAYEAAGVQHVMVHPQDREVDDWDTVIEGVGRVASG
Ga0193719_1012464513300021344SoilIRSHWDGKDVGMMKERVTAYAEAGVQHIMVHPQDREVDDWDTVIEGVGKVAAA
Ga0213873_1012172433300021358RhizosphereLRWHWDGKDLGLARERIDAYEAAGVQHVMIHPQDREVDDWDAVLEGVGRLAAGKR
Ga0213880_1015217123300021953Exposed RockSHWDGKDVGMMKERVAAYAAAGVQHVMVHPQDREIDDWDTVIEGVGKLI
Ga0242657_113741013300022722SoilSIRSHWDGRDVGMMKERVAAYAEAGVQHVMVHPQDREIDDWDTVIEGVGKVAAG
Ga0207659_1134104223300025926Miscanthus RhizosphereDGRDVGMMKERVAAYEDASVQHIMVHPQDREVDDWDTVIAGVGKVAAD
Ga0207701_1072590313300025930Corn, Switchgrass And Miscanthus RhizosphereWDGRDVAIMKERVAAYEDAGVQHIMVHPQDREVDDWDTVIAGVGKVAAD
Ga0207651_1133402323300025960Switchgrass RhizosphereFTISVRTHWAGKDVGELQERIAAYEAAGVQHVMVHPLDREVDEWDEVIEGVGKAAAG
Ga0207712_1183965913300025961Switchgrass RhizosphereSVRSHWDGRDVAMMKERVAAYEDAGVQHIMVHPQDREVDDWDTVIAGVGKVAAD
Ga0209474_1004839513300026550SoilRSHWDGRDIGMMKERVAAYAEAGVQHIMVHPQDREIDDWDTVLDAVGKLAAG
Ga0209178_134247823300027725Agricultural SoilRDLGMMRERVAAYAEAGVQHIMVHPQDREVDDWDTVLDAVGKLAAG
Ga0209040_1016814733300027824Bog Forest SoilGRDVGMMRERVAAYKAAGVQHVMVHPQDREVDDWDTVIEGVGRLAIG
Ga0209579_1052607013300027869Surface SoilVRSHWDGRDAGMMRERLAAFVDAGVEHVMVHPQDREVDDWDTVLEAVGRLAIG
Ga0209283_1055910613300027875Vadose Zone SoilIRSHWDGRDVGMMKERVAAYAEAGVQHVMVHPQDREVDDWDTVIEGVGKVAAG
Ga0209488_1018871313300027903Vadose Zone SoilRSHWDGRDVGMMKERVAAYAEAGVQHVMVHPQDREIDDWDTVIEGVGKVAAG
Ga0209526_1024956723300028047Forest SoilTISIRSHWDGKDVGMMQERVAAYAEAGVQHIMVHPQDREVDDWDTVIEGVGKVAAA
Ga0302226_1039413123300028801PalsaDGKDIGMMKERVGAYAAAGVQHVMVHPQDREIDDWDTVIEGVGKLI
Ga0308309_1016410453300028906SoilSFTISVLSHWDGKDVGMMKERVAGYAAAGVQHVMVHPQDREIDDWDTVIEGVGKLI
Ga0170834_10997961623300031057Forest SoilFTISVRSHWDGKDVGMMRDRVAAYEAAGVQHVMVHPQDREVDDWDTVIEGVGRLASR
Ga0170824_11674737223300031231Forest SoilGFTISVRSHWDGKDVGMMRDRVAGYEAAGVQHVMVHPQDREVDDWDTVIEGVGRVAAG
Ga0170824_12185194213300031231Forest SoilRSHWDGKDAGMMKERVAAYEAAGVQHVMVHPQDREIDDWDTVIAGVGKLI
Ga0302324_10233537923300031236PalsaRSHWDGKDPGMMQERVAAYKEAGVQHIMVHPQDREVDDWNTVIEAVGRLAAG
Ga0318516_1008968713300031543SoilRSHWDGKDIGMMRDRVAAYEAAGVQHVMVHPQDREVDDWDTVIEGVGRLLH
Ga0318516_1026365723300031543SoilRDVGMMRDRVAAYEAAGVQHVMVHPQDREVDDWDEVIEGVGRLATG
Ga0318541_1058738633300031545SoilISLRSHWDGKDVGMMRERVAAYEAAGVQHVMVHPHDREVDDWDTVIEGVGRVASG
Ga0318528_1068201043300031561SoilPEPAFTISVRSHWDGKDVGMMRDRIAAYEAAGVQHFMVHPQDREIDDWDTVIEGVGRVAA
Ga0310686_10703498813300031708SoilTHWDGKDEGLLRARIAAYAEAGVQHIMVHPLDRDVDDWDAVIEGTGRVAAAIG
Ga0318496_1036478523300031713SoilWDGKDVGMMRDRVAAYKAAGVQHVMVHPQDREVDDWDTVIEGVGRVVAS
Ga0306917_1020846133300031719SoilEFTISVRSHWDGKDLGMMRDRIAGYANAGVQHVMIHPQDREIDDWDEVIEGVGRLAVD
Ga0318500_1037508623300031724SoilSHWDGKDVGMMRERVAAYEAVGVQHVMVHPHDREVDDWDTVIEGVGRVAAYM
Ga0318502_1008774313300031747SoilKDVGMMRERVAAYEAAGVQHVMVHPQDREVDDWDTVIEGVGRVATA
Ga0318494_1059827823300031751SoilEPGFTISVRSHWDGKDVGMMRERVAAYEAVGVQHVMVHPQDREIDDWDTVIEGAGRVANA
Ga0318521_1026705323300031770SoilWDGKDVGMMRERVAAYEAVGVQHVMVHPHDREVDDWDTVIEGVGRVAAYM
Ga0318547_1017306913300031781SoilVGMMRDRIAGYEAAGVQHVMVHPQDREVDDWDTVIEAVGRVAAG
Ga0318552_1001186453300031782SoilDGKDVGMMRNRVAAYEAAGVQHVMVHPQDREVDDWDTVIEGVGRVATA
Ga0318576_1012220823300031796SoilDGKDIGMMRDRVAAYEAAGVQHVMVHPQDREVDDWDTVIEGVGRLLH
Ga0307473_1133167713300031820Hardwood Forest SoilIRSHWDGKDVGMMRERVAAYRQVGVQHIMVHPQDREVDDWDTVIEGVGKVAPG
Ga0318517_1017802313300031835SoilISVRSHWDGKDVGMMRNRVAAYEAAGVQHVMVHPQDREVDDWDTVIEGVGRVATA
Ga0318511_1024219613300031845SoilHWDGRDVGMMRDRVAAYEAAGVQHVMVHPQDREVDDWDEVIEGVGRLATG
Ga0318511_1032695513300031845SoilKDVGMLRERVSAYEAAGVQHVMVHPQDREVDDWDTVIEGVGRVAAG
Ga0318495_1037884513300031860SoilSHWDGKDVGMLRERVSAYEAAGVQHVMVHPQDREVDDWDTVIEGVGRVAAG
Ga0306919_1020608313300031879SoilKDVGMMRDRIAAYEAAGVQHVMVHPQDREVDDWDTVIEAVGRVANT
Ga0318544_1004964313300031880SoilGFTISVRSHWDGKDIGMMRDRVAAYEAAGVQHVMVHPQDREVDDWDTVIEGVGRLLH
Ga0306921_1171921913300031912SoilVRSHWDGKDLGMMRDRIAAYAAVGVQHVMVHPQDREVDDWDTVIEGVGRVAAG
Ga0310913_1022524723300031945SoilGKDVGMMRDRIAGYEAAGVQHVMVHPQDREVDDWDTVIEAVGRVANT
Ga0306926_1004949413300031954SoilLRSHWDGKDVGMMRERVAAYEAAGVQHVMVHPHDREVDDWDTVIEGVGRVASG
Ga0318569_1060359823300032010SoilEFTISVRSHWDGKDLGMMRDRIAGYANAGVQHVMVHPQDREIDDWDEVIEGVGRLAAG
Ga0318507_1024476013300032025SoilFTISVRSHWDGKDVGMLRERVSAYEAAGVQHVMVHPQDREVDDWDTVIEGVGRVAAG
Ga0318559_1001039863300032039SoilDGKDLGMMRDRIAAYAAVGVQHVMVHPQDREVDDWDIVIGGVGRVAAG
Ga0318559_1012013433300032039SoilISVRSHWDGRDVGMMRDRVAAYEAAGVQHVMVHPQDREVDDWDEVIEGVGRLATG
Ga0318549_1019099913300032041SoilRPEPGFTISVRSHEDAKDVGMMRDRVAAYKAAGVQHVMVHPQDREVDDWDTVIEGVGRVVAS
Ga0318506_1023901123300032052SoilSFTISVRSHWDGKDVGMMRDRIAAYEAAVVQHVMVHPQDREVDDWDTVIEGVGRVAAG
Ga0318533_1050821213300032059SoilFMISVRSHWDGKDVGMMRDRVAAYEAAGVQHVMVHPQDREVDDWDTVIEGVGCLAVG
Ga0318505_1000265673300032060SoilGFTISVRSHWDGKDVGMMRDRVAAYKAAGVQHVMVHPQDREVDDWNTVIEGVGRVAAG
Ga0318514_1008815613300032066SoilGKDVGMMRDRVAAYKAAGVQHVMVHPQDREVDDWDSVIEGVGRVATG
Ga0318553_1028592213300032068SoilISVRSHWDGKDVGMLRERVSAYEAAGVQHVMVHPQDREVDDWDTVIEGVGRVAAG
Ga0318525_1040261013300032089SoilVRSHWYGKDVGVMRDRVAAYKAAGVQHVMVHPQDREVDDWDTVIEGVGRIAAG
Ga0307472_10047606413300032205Hardwood Forest SoilFTISVRSHWDGKDVGMMRDRVAAYKAAGVQHVMVHPQDREVDDWDTVIEGVGRVAAG
Ga0335081_1091577513300032892SoilSVRSHWDGRDVGMMKERVAAYEEAGVQHIMVHPQDREIDDWDTVIEGVGRVTA
Ga0335073_1197651813300033134SoilVRSHWDGKDIGMMRERVAAYEAAGVQHVMVHPQDREIDDWDTVINGVGKLI
Ga0334854_117867_34_1893300033829SoilVRSHWDGKDIGMMKERVAAYEAAGVQHVVVHPQDREIDDWDTVIEGVGKLI

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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