Metagenome Family F079935

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079935
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	66 residues
Representative Sequence	MSLTGDQVDAITHAWLDLCASKEHFESEEQFTGVGADELAVACTDSVEELEKEFPFLLEGVEDE
Number of Associated Samples	72
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	83.48 %
% of genes near scaffold ends (potentially truncated)	20.87 %
% of genes from short scaffolds (< 2000 bps)	81.74 %
Associated GOLD sequencing projects	57
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.652 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (63.478 % of family members)
Environment Ontology (ENVO)	Unclassified (86.957 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (76.522 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.83% β-sheet: 0.00% Coil/Unstructured: 52.17%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
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SCOP family	SCOP domain	Representative PDB	TM-score
a.25.1.9: Rv2844-like	d2ib0a1	2ib0	0.79787
a.47.2.1: t-snare proteins	d1fioa_	1fio	0.78575
a.2.7.1: Seryl-tRNA synthetase (SerRS)	d1seta1	1set	0.76115
a.2.11.1: Fe,Mn superoxide dismutase (SOD), N-terminal domain	d1my6a1	1my6	0.76112
a.25.1.0: automated matches	d4a25a_	4a25	0.75828

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF14207	DpnD-PcfM	4.35
PF13589	HATPase_c_3	1.74
PF05496	RuvB_N	1.74
PF01467	CTP_transf_like	1.74
PF00436	SSB	1.74
PF13455	MUG113	1.74
PF10544	T5orf172	0.87
PF01050	MannoseP_isomer	0.87
PF00383	dCMP_cyt_deam_1	0.87
PF04542	Sigma70_r2	0.87
PF00145	DNA_methylase	0.87
PF06127	Mpo1-like	0.87
PF00271	Helicase_C	0.87
PF02463	SMC_N	0.87
PF01521	Fe-S_biosyn	0.87
PF00239	Resolvase	0.87
PF14743	DNA_ligase_OB_2	0.87
PF01244	Peptidase_M19	0.87
PF01068	DNA_ligase_A_M	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	1.74
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	1.74
COG2255	Holliday junction resolvasome RuvABC, ATP-dependent DNA helicase subunit RuvB	Replication, recombination and repair [L]	1.74
COG4539	2-hydroxy fatty acid dioxygenase MPO1 (alpha-oxidation of fatty acids)	Lipid transport and metabolism [I]	0.87
COG4841	Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF family	Function unknown [S]	0.87
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.87
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	0.87
COG0316	Fe-S cluster assembly iron-binding protein IscA	Posttranslational modification, protein turnover, chaperones [O]	0.87
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.87
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.87
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.87
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.87
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.87
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.87
COG2355	Zn-dependent dipeptidase, microsomal dipeptidase homolog	Posttranslational modification, protein turnover, chaperones [O]	0.87
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
All Organisms	root	All Organisms	44.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
Viruses	superkingdom	All Organisms → Viruses	25.22 %
cellular organisms	root	All Organisms → cellular organisms	19.13 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.35 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	17.39 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.74 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.35 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	7.83 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	3.48 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	1.74 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.74 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.35 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	7.83 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	3.48 %
Candidatus Pacearchaeota	clade	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota	1.74 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.74 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.87 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.87 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.35 %
Chloroflexi incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis	6.96 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3.48 %
Candidatus Poribacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria	1.74 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1.74 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.87 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.87 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.35 %
SAR202 cluster	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster	6.96 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	3.48 %
unclassified Candidatus Poribacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria	1.74 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1.74 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.87 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.87 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.35 %
SAR202 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	6.96 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	3.48 %
Candidatus Poribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	1.74 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1.74 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.87 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.87 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.35 %
SAR202 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	6.96 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	3.48 %
Candidatus Poribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	1.74 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1.74 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	0.87 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.87 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.35 %
SAR202 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	6.96 %
unclassified Flavobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae	2.61 %
Candidatus Poribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	1.74 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1.74 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.87 %
Maribacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter	0.87 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.87 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.35 %
SAR202 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	6.96 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	2.61 %
Candidatus Poribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	1.74 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1.74 %
unclassified Maribacter	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter	0.87 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.87 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.87 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.35 %
SAR202 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	6.96 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	2.61 %
Candidatus Poribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	1.74 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1.74 %
Maribacter sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.	0.87 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.87 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.87 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000325\|SI39nov09_100mDRAFT_1011655	All Organisms → Viruses → Predicted Viral	2261	Open in IMG/M
3300001683\|GBIDBA_10039521	All Organisms → Viruses → Predicted Viral	1885	Open in IMG/M
3300001683\|GBIDBA_10082763	All Organisms → Viruses → Predicted Viral	1385	Open in IMG/M
3300002511\|JGI25131J35506_1066967	Not Available	501	Open in IMG/M
3300002760\|JGI25136J39404_1013522	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1461	Open in IMG/M
3300003542\|FS900DNA_10088102	Not Available	1047	Open in IMG/M
3300004448\|Ga0065861_1186684	Not Available	974	Open in IMG/M
3300004460\|Ga0066222_1365035	Not Available	507	Open in IMG/M
3300006736\|Ga0098033_1203506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	548	Open in IMG/M
3300006738\|Ga0098035_1151992	Not Available	786	Open in IMG/M
3300006738\|Ga0098035_1209814	Not Available	648	Open in IMG/M
3300006751\|Ga0098040_1081925	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	982	Open in IMG/M
3300006751\|Ga0098040_1130706	Not Available	747	Open in IMG/M
3300006753\|Ga0098039_1033204	All Organisms → Viruses → Predicted Viral	1831	Open in IMG/M
3300006753\|Ga0098039_1049322	Not Available	1474	Open in IMG/M
3300006754\|Ga0098044_1015857	All Organisms → Viruses → Predicted Viral	3444	Open in IMG/M
3300006754\|Ga0098044_1069428	All Organisms → Viruses → Predicted Viral	1474	Open in IMG/M
3300006754\|Ga0098044_1102757	All Organisms → Viruses → Predicted Viral	1170	Open in IMG/M
3300006754\|Ga0098044_1121153	All Organisms → Viruses → Predicted Viral	1062	Open in IMG/M
3300006789\|Ga0098054_1009509	All Organisms → Viruses → Predicted Viral	4045	Open in IMG/M
3300006789\|Ga0098054_1178715	Not Available	778	Open in IMG/M
3300006789\|Ga0098054_1323466	Not Available	550	Open in IMG/M
3300006789\|Ga0098054_1345599	Not Available	528	Open in IMG/M
3300006793\|Ga0098055_1253724	Not Available	661	Open in IMG/M
3300006900\|Ga0066376_10230576	Not Available	1101	Open in IMG/M
3300006902\|Ga0066372_10372262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	821	Open in IMG/M
3300006921\|Ga0098060_1179541	Not Available	582	Open in IMG/M
3300006923\|Ga0098053_1119379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	529	Open in IMG/M
3300007963\|Ga0110931_1038418	All Organisms → Viruses → Predicted Viral	1447	Open in IMG/M
3300008050\|Ga0098052_1267521	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	651	Open in IMG/M
3300008050\|Ga0098052_1311528	Not Available	594	Open in IMG/M
3300008216\|Ga0114898_1006448	Not Available	5002	Open in IMG/M
3300008216\|Ga0114898_1129341	Not Available	737	Open in IMG/M
3300008218\|Ga0114904_1119470	Not Available	631	Open in IMG/M
3300008219\|Ga0114905_1117774	Not Available	907	Open in IMG/M
3300008624\|Ga0115652_1005516	Not Available	7085	Open in IMG/M
3300008624\|Ga0115652_1025059	All Organisms → Viruses → Predicted Viral	2345	Open in IMG/M
3300009104\|Ga0117902_1195069	All Organisms → Viruses → Predicted Viral	2015	Open in IMG/M
3300009173\|Ga0114996_10352576	All Organisms → Viruses → Predicted Viral	1139	Open in IMG/M
3300009173\|Ga0114996_10459958	Not Available	965	Open in IMG/M
3300009425\|Ga0114997_10059855	All Organisms → Viruses → Predicted Viral	2419	Open in IMG/M
3300009425\|Ga0114997_10440627	Not Available	700	Open in IMG/M
3300009441\|Ga0115007_11113552	Not Available	547	Open in IMG/M
3300009481\|Ga0114932_10452528	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	758	Open in IMG/M
3300009622\|Ga0105173_1014023	All Organisms → Viruses → Predicted Viral	1156	Open in IMG/M
3300009622\|Ga0105173_1035057	Not Available	808	Open in IMG/M
3300009705\|Ga0115000_10003772	Not Available	12598	Open in IMG/M
3300009705\|Ga0115000_10051565	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	2815	Open in IMG/M
3300009705\|Ga0115000_10726917	Not Available	612	Open in IMG/M
3300009705\|Ga0115000_10856504	Not Available	556	Open in IMG/M
3300009786\|Ga0114999_10699933	Not Available	759	Open in IMG/M
3300010149\|Ga0098049_1247395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	542	Open in IMG/M
3300010153\|Ga0098059_1092826	Not Available	1200	Open in IMG/M
3300010883\|Ga0133547_10018568	All Organisms → cellular organisms → Bacteria	18023	Open in IMG/M
3300010883\|Ga0133547_10127640	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	5570	Open in IMG/M
3300010883\|Ga0133547_11920395	Not Available	1088	Open in IMG/M
3300012950\|Ga0163108_10546231	Not Available	749	Open in IMG/M
3300017775\|Ga0181432_1034233	All Organisms → Viruses → Predicted Viral	1375	Open in IMG/M
3300017775\|Ga0181432_1271321	Not Available	537	Open in IMG/M
3300017775\|Ga0181432_1282293	Not Available	526	Open in IMG/M
3300020457\|Ga0211643_10426642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	651	Open in IMG/M
3300025066\|Ga0208012_1024531	Not Available	957	Open in IMG/M
3300025084\|Ga0208298_1098306	Not Available	532	Open in IMG/M
3300025096\|Ga0208011_1064545	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	824	Open in IMG/M
3300025103\|Ga0208013_1024777	All Organisms → cellular organisms → Bacteria	1752	Open in IMG/M
3300025103\|Ga0208013_1071489	Not Available	907	Open in IMG/M
3300025109\|Ga0208553_1034361	All Organisms → Viruses → Predicted Viral	1294	Open in IMG/M
3300025112\|Ga0209349_1035883	All Organisms → Viruses → Predicted Viral	1629	Open in IMG/M
3300025118\|Ga0208790_1132798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	700	Open in IMG/M
3300025125\|Ga0209644_1018046	All Organisms → Viruses → Predicted Viral	1516	Open in IMG/M
3300025125\|Ga0209644_1039305	Not Available	1068	Open in IMG/M
3300025125\|Ga0209644_1087130	Not Available	734	Open in IMG/M
3300025128\|Ga0208919_1254096	Not Available	509	Open in IMG/M
3300025131\|Ga0209128_1038730	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1851	Open in IMG/M
3300025133\|Ga0208299_1193760	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	608	Open in IMG/M
3300025133\|Ga0208299_1198745	Not Available	596	Open in IMG/M
3300025241\|Ga0207893_1029854	Not Available	771	Open in IMG/M
3300025248\|Ga0207904_1024114	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.	1155	Open in IMG/M
3300025248\|Ga0207904_1040366	Not Available	816	Open in IMG/M
3300025251\|Ga0208182_1000939	Not Available	15294	Open in IMG/M
3300025267\|Ga0208179_1004340	Not Available	5694	Open in IMG/M
3300025300\|Ga0208181_1051989	Not Available	848	Open in IMG/M
3300025305\|Ga0208684_1105111	Not Available	700	Open in IMG/M
3300025873\|Ga0209757_10017473	Not Available	1966	Open in IMG/M
3300025873\|Ga0209757_10047769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1253	Open in IMG/M
3300025873\|Ga0209757_10128138	Not Available	788	Open in IMG/M
3300025873\|Ga0209757_10265443	Not Available	546	Open in IMG/M
3300025873\|Ga0209757_10278081	Not Available	532	Open in IMG/M
3300026103\|Ga0208451_1031472	Not Available	627	Open in IMG/M
3300027771\|Ga0209279_10283590	Not Available	509	Open in IMG/M
3300027801\|Ga0209091_10001120	Not Available	24205	Open in IMG/M
3300027801\|Ga0209091_10087149	Not Available	1702	Open in IMG/M
3300027838\|Ga0209089_10216559	All Organisms → Viruses → Predicted Viral	1123	Open in IMG/M
3300031519\|Ga0307488_10214392	All Organisms → Viruses → Predicted Viral	1294	Open in IMG/M
3300031596\|Ga0302134_10234668	Not Available	724	Open in IMG/M
3300031605\|Ga0302132_10073230	Not Available	1754	Open in IMG/M
3300031606\|Ga0302119_10075914	All Organisms → Viruses → Predicted Viral	1382	Open in IMG/M
3300031627\|Ga0302118_10001376	Not Available	12033	Open in IMG/M
3300031627\|Ga0302118_10017858	All Organisms → Viruses → Predicted Viral	3634	Open in IMG/M
3300031627\|Ga0302118_10116689	All Organisms → Viruses → Predicted Viral	1322	Open in IMG/M
3300031627\|Ga0302118_10306630	Not Available	732	Open in IMG/M
3300031627\|Ga0302118_10390326	Not Available	627	Open in IMG/M
3300031627\|Ga0302118_10414634	Not Available	603	Open in IMG/M
3300031659\|Ga0307986_10034756	All Organisms → Viruses → Predicted Viral	2757	Open in IMG/M
3300031701\|Ga0302120_10315575	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	565	Open in IMG/M
3300031757\|Ga0315328_10447931	Not Available	747	Open in IMG/M
3300031800\|Ga0310122_10000495	All Organisms → cellular organisms → Bacteria	24867	Open in IMG/M
3300031800\|Ga0310122_10019728	All Organisms → Viruses → Predicted Viral	3942	Open in IMG/M
3300032048\|Ga0315329_10403528	Not Available	728	Open in IMG/M
3300032277\|Ga0316202_10234506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	853	Open in IMG/M
3300032360\|Ga0315334_10030394	All Organisms → Viruses → Predicted Viral	3771	Open in IMG/M
3300032360\|Ga0315334_10338177	All Organisms → Viruses → Predicted Viral	1262	Open in IMG/M
3300032360\|Ga0315334_10894961	Not Available	769	Open in IMG/M
3300032360\|Ga0315334_11299123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	627	Open in IMG/M
3300032360\|Ga0315334_11737228	Not Available	531	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	78.26%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	6.96%
Coastal	Environmental → Aquatic → Marine → Coastal	6.09%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.61%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	2.61%
Strait	Environmental → Aquatic → Marine → Strait	2.61%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	77.39%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	6.96%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	5.22%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.61%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	2.61%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	1.74%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.87%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.87%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.87%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	63.48%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	9.57%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	6.09%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	2.61%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	2.61%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	2.61%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	1.74%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.74%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.74%
Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume	1.74%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	0.87%
Microbial Mat	Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat	0.87%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	0.87%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.87%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.87%
Diffuse Hydrothermal Flow Volcanic Vent	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent	0.87%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000325	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 39 11/10/09 100m	Environmental	Open in IMG/M
3300001683	Hydrothermal vent plume microbial communities from Guaymas Basin, Gulf of California - IDBA assembly	Environmental	Open in IMG/M
3300002511	Marine viral communities from the Pacific Ocean - ETNP_2_1000	Environmental	Open in IMG/M
3300002760	Marine viral communities from the Pacific Ocean - ETNP_6_1000	Environmental	Open in IMG/M
3300003542	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS900_Dependable_DNA	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004460	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental	Open in IMG/M
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental	Open in IMG/M
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental	Open in IMG/M
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006900	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A	Environmental	Open in IMG/M
3300006902	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_A	Environmental	Open in IMG/M
3300006921	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG	Environmental	Open in IMG/M
3300006923	Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG	Environmental	Open in IMG/M
3300007963	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300008216	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar	Environmental	Open in IMG/M
3300008218	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6	Environmental	Open in IMG/M
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental	Open in IMG/M
3300008624	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 200m, 250-2.7um	Environmental	Open in IMG/M
3300009104	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um	Environmental	Open in IMG/M
3300009173	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134	Environmental	Open in IMG/M
3300009425	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136	Environmental	Open in IMG/M
3300009441	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M Metagenome	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300009622	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155	Environmental	Open in IMG/M
3300009705	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128	Environmental	Open in IMG/M
3300009786	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126	Environmental	Open in IMG/M
3300010149	Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300012950	Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaG	Environmental	Open in IMG/M
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental	Open in IMG/M
3300020457	Marine microbial communities from Tara Oceans - TARA_B100001113 (ERX555941-ERR599014)	Environmental	Open in IMG/M
3300025066	Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025084	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025096	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)	Environmental	Open in IMG/M
3300025103	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)	Environmental	Open in IMG/M
3300025109	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)	Environmental	Open in IMG/M
3300025112	Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)	Environmental	Open in IMG/M
3300025118	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)	Environmental	Open in IMG/M
3300025125	Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)	Environmental	Open in IMG/M
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental	Open in IMG/M
3300025131	Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)	Environmental	Open in IMG/M
3300025133	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)	Environmental	Open in IMG/M
3300025241	Marine viral communities from the Deep Pacific Ocean - MSP-121 (SPAdes)	Environmental	Open in IMG/M
3300025248	Marine viral communities from the Deep Pacific Ocean - MSP-118 (SPAdes)	Environmental	Open in IMG/M
3300025251	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)	Environmental	Open in IMG/M
3300025267	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar (SPAdes)	Environmental	Open in IMG/M
3300025300	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6 (SPAdes)	Environmental	Open in IMG/M
3300025305	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05 (SPAdes)	Environmental	Open in IMG/M
3300025873	Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)	Environmental	Open in IMG/M
3300026103	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155 (SPAdes)	Environmental	Open in IMG/M
3300027771	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA (SPAdes)	Environmental	Open in IMG/M
3300027801	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 (SPAdes)	Environmental	Open in IMG/M
3300027838	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031596	Marine microbial communities from Western Arctic Ocean, Canada - CB9_SCM	Environmental	Open in IMG/M
3300031605	Marine microbial communities from Western Arctic Ocean, Canada - CB9_32.1	Environmental	Open in IMG/M
3300031606	Marine microbial communities from Western Arctic Ocean, Canada - AG5_Tmax	Environmental	Open in IMG/M
3300031627	Marine microbial communities from Western Arctic Ocean, Canada - AG5_33.1	Environmental	Open in IMG/M
3300031659	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #82	Environmental	Open in IMG/M
3300031701	Marine microbial communities from Western Arctic Ocean, Canada - AG5_Bottom	Environmental	Open in IMG/M
3300031757	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315	Environmental	Open in IMG/M
3300031800	Marine microbial communities from Western Arctic Ocean, Canada - CB6_Bottom_1051	Environmental	Open in IMG/M
3300032048	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 32315	Environmental	Open in IMG/M
3300032277	Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotite	Environmental	Open in IMG/M
3300032360	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SI39nov09_100mDRAFT_10116559	3300000325	Marine	MSVADISNIMTPEQIDAITHAWLDLCAIKEHFDAPDEFVGIGADELKAACEGSIEELEQEFPFLLEGVEDE*
GBIDBA_100395211	3300001683	Hydrothermal Vent Plume	MSNLTNEQVDAITHAWLDLCASKEQFEFLSEWQMTEAQELVIACRDSVKELEVAFPFLMERD*
GBIDBA_100827633	3300001683	Hydrothermal Vent Plume	MSLTSDQVDAITHAWLDLCASWEQFESEEQFTGVGADELAVACFDSIKELEKEFPFLLEGVEDE*
JGI25131J35506_10669671	3300002511	Marine	MSDLTIRMSNLSDDQKDAIRNAWLDLCAIKEHFDAPDEFVGIGADELKAACEGSIEELEQEFPFLLEDVEDE*
JGI25136J39404_10135221	3300002760	Marine	MSDLTIRMSNLSSDQVDAITHAWLDLCASKDQFESDDQFTGVGADELAVACRDSVEELEKAFPFLLEGVEDE*
FS900DNA_100881025	3300003542	Diffuse Hydrothermal Flow Volcanic Vent	MSNLTKEQIDAITHAWLDLCASKVHFESEEQFTGVGADELAVACTDSVEELEKEFPFLLEGVEDE*
Ga0065861_11866842	3300004448	Marine	MSDLAKELGAGSLTGDQVDAITHAWLDLCAIKEHLDAPDEFIGVGAEELLAACEGSIEELEQEFPFLLEEV*
Ga0066222_13650352	3300004460	Marine	MSDLAKELGAGSLTGDQVDAITHAWLDLCAIKEHLDAPDEFIGVRAEELLAACEGSIEELEQEFPFLLEEV*
Ga0098033_12035062	3300006736	Marine	MSNLTSEQVDAITHAWLDLCASKEQFESDDQFTGVGADELAVACRDSVKELEREFPFLLEGVEDE*
Ga0098035_11519924	3300006738	Marine	SDQVDAITHAWLDLCASKEHFEGEDQFVGVGADELAVACRDSVQELEKTFAFLLEDVEDE
Ga0098035_12098142	3300006738	Marine	MSLTIDQVDAITHAWLDLCASQDHFESEEQFTGVGADELAVACGDSVKELEREFPFLLEGVEDE*
Ga0098040_10819254	3300006751	Marine	MSKQYNDSLTSDQVDAITHAWLDLCASKQHFEGVINSVRQAGADELAAACRDSVEELETAFPFLMERG*
Ga0098040_11307062	3300006751	Marine	MSLTSDQVDAITHAWLDLCASKQHFEGEDQFVGVGADELAVACTDSVQELETAFPFLMEGV*
Ga0098039_10332046	3300006753	Marine	MGVADISNIMTPEQIDAITHAWLDLCASKEHFESEEQFTGVGADELAVACTDSVEELEKTFPFLLEGVEDE*
Ga0098039_10493223	3300006753	Marine	MSLTIDQVDAITHAWLDLCASQDHFESEEQFTGVGADELAVACTDSVEELEKEFPFLLEGVEDE*
Ga0098044_10158573	3300006754	Marine	MSLTIDQVDAITHAWLDLCASQDHFESEEQFTGVGADELAVACRDSVKELEREFPFLLEGVNDATL*
Ga0098044_10694284	3300006754	Marine	MSLTSDQVDAITHAWLDLCASKEQFESDDQFTGVGADELAVACRDSVEELETAFPFLLEGVE*
Ga0098044_11027573	3300006754	Marine	MSKQYNDSLTPDQVDAITHAWLDLCASKQHFEGEDQFVGVGADELAVACRDSVQELETAFPFLMEGV*
Ga0098044_11211533	3300006754	Marine	MSLTSEQIDAITHTWLDLCASKQHFEGTINSVRQVEVDELAVACRDSVEELEKEFPFLMENAGEVEDE*
Ga0098054_10095098	3300006789	Marine	MSVADISNIMTPEQIDAITHAWLDLCASKEQFESDDQFTGVGADELAIACRDSIEELEKTFPFLLEGVEDE*
Ga0098054_11787154	3300006789	Marine	MSLTIDQVDAITHAWLDLCASQDHFEGEDEFVGVGADELAVACRDSVKELEREFPFLLEGVKDE*
Ga0098054_13234662	3300006789	Marine	MSKQYNDSLTPDQVDAITHAWLDLCASKQHFEGEDQFVGVGADELAVACTDSVQELETAFPFLMEGV*
Ga0098054_13455991	3300006789	Marine	MSLTSEQIDAITHTWLDLCASKQHFEGTINSVRQVEVDELAVACRDSVEELEKEFPFLME
Ga0098055_12537243	3300006793	Marine	MSLTIDQVDAITHAWLDLCASQDHFESEEQFTGVGADELAVACGDSVKELEREFPFLLEGVEDD*
Ga0066376_102305763	3300006900	Marine	MSLTSDQVDAITHAWLDLCASKDHFESEEQFTGVGVDELAVACTDSVEELEKEFPFLLEEVEDADIS*
Ga0066372_103722624	3300006902	Marine	MSKQYNDSLTSEQVDAITHAWLDLCASKQHFEGVINSVRQVGADELAVACRDSVEELETAFPFLMERG*
Ga0098060_11795413	3300006921	Marine	MSLTSDQVDAITHAWLDLCAGKEQFESDDQFTGVGADELAVACRDSVEELEKTFPFLLEGVEDE*
Ga0098053_11193792	3300006923	Marine	MSKQYNDSLTPDQVDAITHAWLDLCASKEHFEGEDQFVGVGADELAVACRDSVQELETAFPFLMEGV*
Ga0110931_10384186	3300007963	Marine	DISNIMTPEQIDAITHAWLDLCASKEHFESEEQFTGVGADELAVACRDSVEELEKEFPFLLEGVEDE*
Ga0098052_12675211	3300008050	Marine	DLAKELGAGSLTDDQVDAITHAWLDLCAIKEHLDAPDEFVGVGASELLVACEGSIEELEQEFPFLLEEV*
Ga0098052_13115282	3300008050	Marine	MSLTIDQVDAITHAWLDLCASQDHFESEEQFTGVGADELAIACRDSIEELEKAFPFLLEGIEDE*
Ga0114898_10064483	3300008216	Deep Ocean	MSKQYNDSLTSDQVDAITHAWLDLCASKQHFEGAINSVRQAGADELAAACRDSVEELETAFPFLMERG*
Ga0114898_11293413	3300008216	Deep Ocean	MSLTSDQVDAITHAWLDLCASKEQFESDDQFTGVGADELAVACRDSVEELETAFPFLLEGVKDE*
Ga0114904_11194703	3300008218	Deep Ocean	SRDTFKAKGEPQYYQLTKDQVCAIRNAWLDLCVSTKHFESEEQFIGVGADELAVACKGSVEELEKEFPFLLKEIEDE*
Ga0114905_11177744	3300008219	Deep Ocean	MKELKMSLTSDQVDAITHAWLDLCASKEHFESEEQFTGVGADELAVACTDSVEELEKTFPFLLEGVEDA*
Ga0115652_100551618	3300008624	Marine	MSLTIDQVDAITHAWLDLCASQDHFESEEQFTGVGADELAVACRDSVKDLETAFPFLLEGVEDE*
Ga0115652_10250594	3300008624	Marine	MSKEYNDSLTPDQVDAITHAWLDLCASNQHFEGTINSVRQVEADELAVACRDSVEELETAFPFLMERG*
Ga0117902_11950694	3300009104	Marine	MSKEYNDSLTPDQVDAITHAWLDLCASNQHFEGTINSVRQVEADELAVACRDSVEE
Ga0114996_103525763	3300009173	Marine	MNDLAKELGAGCLTSEQVDAITHAWLDLCASQEQFESDPQSNRRIGDELAIACSDSVEELETAFPFLLEGVED*
Ga0114996_104599585	3300009173	Marine	AITHAWLDLCASWEQFESEEQFTGVGADELAVACFDSIKELEQEFPFLLEGVKDE*
Ga0114997_100598553	3300009425	Marine	MSDLAKELGAGSLTGDQADAITNAWLDLCAIREHLDAPDEFIGVGAEELLAACEGSIEELEQEFPFLLEGVEDE*
Ga0114997_104406272	3300009425	Marine	MTDKQIDAIRNAWLDLCASKEHFDSDNEFVGVGADELAVACTDSVEELEKEFPFLLEDV*
Ga0115007_111135521	3300009441	Marine	MSDLTSDQVDAITHAWLDLCASWEQFESEEQFTGVGADELAVACFDSIKELETAFPFLLEGVEDE*
Ga0114932_104525281	3300009481	Deep Subsurface	VDAITHAWLDLCASKEHFESEEEFIGVGADELAAACKGSVEELEKEFPFLLKEIEDE*
Ga0105173_10140233	3300009622	Marine Oceanic	MSLTSDQVDAITHAWLDLCASKEHFESEEQFTGVGVDELAVACTDSVEELEKEFPFLLEGVEDE*
Ga0105173_10350572	3300009622	Marine Oceanic	MSLTSDQVDAITHAWLDLCASKDHFESEEQFTGVGVDELAVACTDSVEELEKEFPFLLEGVEDE*
Ga0115000_1000377210	3300009705	Marine	MSLTSDQVDAITHAWLDLCASKEHFESEEQFTGVGADELAVACTDSLEELEKEFPFLLEGVEDE*
Ga0115000_100515654	3300009705	Marine	MNNSAKELGAGSLTGDQVAAITHAWLDLCASKEHFEGEDEFVGVGADELAVACTDSVEELEKEFPFLLEGVEDELNK*
Ga0115000_107269171	3300009705	Marine	KELKMSDLAKELGAGSLTEDQTEAIRHAWLDLCVSWEQFESEEQFTGVGADELAVACFDSIKELETAFPFLLEGVEDE*
Ga0115000_108565041	3300009705	Marine	MSLTSDQVDAITHAWLDLCASKEHFESEEQFTGVGADELAVACTDSVEELEKEFPFLLEGVEDELNK*
Ga0114999_106999334	3300009786	Marine	MSLTSDQVEAITHAWLDLCASWEQFESEEQFTGVGADELAVACFDSIKELETAFPFLLEGVESE*
Ga0098049_12473952	3300010149	Marine	MSLTIDQVDAITHAWLDLCASKEHFEGEDQFVGVGADELAVACRDSVQELETAFPFLMEGV*
Ga0098059_10928263	3300010153	Marine	MSLTSDQVDAITHAWLDLCASKEQFESDDQFTGVGADELAIACRDSIEELEKAFPFLLEGVNDATL*
Ga0133547_1001856810	3300010883	Marine	MSDLAKELGAGSLTEDQTEAIRHAWLDLCESWEQFESEEQFSGVVADELAVACFDSIKELEQEFPFLLEGVKDE*
Ga0133547_101276403	3300010883	Marine	MSLTSDQVDAITHAWLDLCASKEHFESEEQFTGVGADELAVACTDSVEELEKEFPFLLEDV*
Ga0133547_119203954	3300010883	Marine	MSDLTGDQVDAITHAWLDLCAIREHLDAPDEFIGVGAEELLAACEGSIEELEQEFAFLLEGVEDE*
Ga0163108_105462312	3300012950	Seawater	MTLTSEQIDAITHAWLDLCASKEHFESEEQFTGVGADELAVACRDSVKDLETAFPFLLEGVEDE*
Ga0181432_10342332	3300017775	Seawater	MSDLTIRMSNLSDDQKDAIRNAWLDLCAIKEHLDAPDEFLGVGASELLAACEGSIEELEQEFPFLLEGIEDE
Ga0181432_12713213	3300017775	Seawater	MSDLTIRMSNLSSDQVDAITHAWLDLCASKEHFESEEQFTGVGADELVVACTDSVEELEA
Ga0181432_12822931	3300017775	Seawater	DISNIMTPEQIDAITHAWLDLCASWEQFESDDQFTGVGADELAIACRDSIEELEKAFPFLLEGIEDE
Ga0211643_104266422	3300020457	Marine	MSNLTSEQVDAITHAWLDLCASKEHFEGDDEFVGVGANELAVACKDSVEELEKAFPFLMEGVEG
Ga0208012_10245312	3300025066	Marine	MSLTSDQVDAITHAWLDLCASKEQFESDDQFTGVGADELAVACRDSVEELETAFPFLLEGVE
Ga0208298_10983063	3300025084	Marine	KEIKMSLTIDQVDAITHAWLDLCASQDHFESEEQFTGVGADELAVACRDSVKELEREFPFLLEGVNDATL
Ga0208011_10645453	3300025096	Marine	MSKQYNDSLTSDQVDAITHAWLDLCASKQHFEGVINSVRQAGADELAAACRDSVEELEKEFPFLMEPVNE
Ga0208013_10247777	3300025103	Marine	MSLTIDQVDAITHAWLDLCASQDHFESEEQFTGVGADELAVACGDSVKELEREFPFLLEGVEDE
Ga0208013_10714891	3300025103	Marine	MSVADISNIMTPEQIDAITHAWLDLCASKEQFESDDQFTGVGADELAIACRDSIEELEKAFPFLLEGVEDE
Ga0208553_10343614	3300025109	Marine	MSLTIDQVDAITHAWLDLCASQDHFESEEQFTGVGADELAVACTDSVEELEKTFPFLLEGVEDE
Ga0209349_10358836	3300025112	Marine	MSLTIDQVDAITHAWLDLCASQDHFESEEQFTGVGADELAVACRDSVKELEREFPFLLEGIEDE
Ga0208790_11327983	3300025118	Marine	MSLTSEQIDAITHTWLDLCASKQHFEGTINSVRQVEVDELAVACRDSVEELEKEFPFLMENAGEVEDE
Ga0209644_10180463	3300025125	Marine	MSLTSDQVDAITHAWLDLCASWEQFESEEQFTGVGADELAVACFESIKELEKEFPFLLEGVEND
Ga0209644_10393055	3300025125	Marine	MSDLTIRMSNLSSDQVDAITHAWLDLCASKDQFESDDQFTGVGADELAVACRDSVEELEKAFPFLLEGVEDE
Ga0209644_10871303	3300025125	Marine	MSDLTIRMSNLSDDQKDAIRNAWLDLCAIKEHFDAPDEFVGIGADELKAACEGSIEELEQEFPFLLEDVEDE
Ga0208919_12540962	3300025128	Marine	MSLTIDQVDAITHAWLDLCASQDHFESEEQFTGVGADELAVACRDSVKELEREFPFLLEGVEDE
Ga0209128_10387308	3300025131	Marine	MSKQYNDSLTSDQVDAITHAWLDLCASKQHFEGVINSVRQAGADELAAACRDSVEELETAFPFLMERG
Ga0208299_11937603	3300025133	Marine	AGSLTDDQVDAITHAWLDLCAIKEHLDAPDEFVGVGASELLVACEGSIEELEQEFPFLLEEV
Ga0208299_11987453	3300025133	Marine	MSVADISNIMTPEQIDAITHAWLDLCASKEQFESDDQFTGVGADELAIACRDSIEELEKAFPFLLEGVEGDKEPS
Ga0207893_10298541	3300025241	Deep Ocean	MSNLTSDQVDAITHAWLDLCASKDHFESEEQFTGVGADELAVACTDSVEELEKEFPFLLEGVEDAS
Ga0207904_10241143	3300025248	Deep Ocean	MNLTSNQRDAIRNAWLDLCTCKEHFEGDDEFVGVAADELAVACKDCIAELEKEFPFLTGENTDE
Ga0207904_10403662	3300025248	Deep Ocean	MSLTSDQVDAITHAWLDLCASKDHFESEEQFTGVGADELAVACTDSVEELEKEFPFLLEGVEDE
Ga0208182_100093928	3300025251	Deep Ocean	MSLTSDQVDAITHAWLDLCASKEQFESDDQFTGVGADELAVACRDSVEELETAFPFLLEGVKDE
Ga0208179_10043402	3300025267	Deep Ocean	MSKQYNDSLTSDQVDAITHAWLDLCASKQHFEGAINSVRQAGADELAAACRDSVEELETAFPFLMERG
Ga0208181_10519891	3300025300	Deep Ocean	MSKQYNDSLTSDQVDAITHAWLDLCASKQHFEGAINSVRQAGADELAAACRDSVEELETAFP
Ga0208684_11051111	3300025305	Deep Ocean	MSLTSDQVDAITHAWLDLCASKEHFESEEQFTGVGADELAVACTDSVEELEKTFPFLLEGVEDA
Ga0209757_100174731	3300025873	Marine	MSDLTIRMSNLSDDQKDAIRNAWLDLCAIKEHFDAPDEFVGIGADELKAACEGSIEELEQEFPF
Ga0209757_100477693	3300025873	Marine	MSDLEKELGAGCLTSDQVDAITHAWLDLCAIKEHLDAPDEFVGVGAGELLAACEGSIEELEQEFPFLLEEV
Ga0209757_101281383	3300025873	Marine	VVGKYGATMSLTSDQVDAITHAWLDLCASWEQFESEEQFTGVGADELAVACFDSIKELEKEFPFLLEGVEDE
Ga0209757_102654432	3300025873	Marine	MSLTSDQVDAITHAWLDLCAIKEHFDAPDEFVGIGADELKAACEGSIEELEQEFPFLLEGVEDE
Ga0209757_102780813	3300025873	Marine	MSLTIDQVDAITHAWLDLCASWEQFESEEQFTGVGAEELAVACFDSIKELEKEFPFLLEGVEDE
Ga0208451_10314723	3300026103	Marine Oceanic	MSLTSDQVDAITHAWLDLCASKDHFESEEQFTGVGVDELAVACTDSVEELEK
Ga0209279_102835901	3300027771	Marine	MSDLAKELGAGCLTSDQVDAITHAWLDLCAIKEHLDAPDEFIGVGAEELLAACEGSIEELEQEFPFLLEEV
Ga0209091_1000112029	3300027801	Marine	MSLTSDQVDAITHAWLDLCASKEHFESEEQFTGVGADELAVACTDSLEELEKEFPFLLEGVEDE
Ga0209091_100871494	3300027801	Marine	MNNSAKELGAGSLTGDQVAAITHAWLDLCASKEHFEGEDEFVGVGADELAVACTDSVEELEKEFPFLLEGVEDELNK
Ga0209089_102165592	3300027838	Marine	MNDLAKELGAGCLTSEQVDAITHAWLDLCASQEQFESDPQSNRRIGDELAIACSDSVEELETAFPFLLEGVED
Ga0307488_102143922	3300031519	Sackhole Brine	MSDLAKELGAGSLTGDQVDAITHAWLDLCAIKEHLDAPDEFIGVGAEELLAACEGSIEELEQEFPFLLEEV
Ga0302134_102346682	3300031596	Marine	MSDLAKELGAGSLTGDQVAAITHAWLDLCASKEHFEGEDEFVGVGADELAVACTDSVEELEKEFPFLLEGVEDELNK
Ga0302132_100732301	3300031605	Marine	HAWLDLCASKEHFEGEDEFVGVGADELAVACTDSVEELEKEFPFLLEGVEDELNK
Ga0302119_100759141	3300031606	Marine	MRLTNDQVMAITHAWLDLCASWEQFESEEQFTGVGADELAVACFDSIKELETAFPFLLEEAG
Ga0302118_100013767	3300031627	Marine	MSDLAKELGAGSLTEDQTEAIRHAWLDLCVSWEQFESEEQFSGVVADELAVACFDSIKELEQEFPFLLEGVKDE
Ga0302118_100178581	3300031627	Marine	QADAITNAWLDLCAIREHLDAPDEFIGVGAEELLAACEGSIEELEQEFPFLLEGVEDE
Ga0302118_101166895	3300031627	Marine	MSLTSDQVEAITHAWLDLCASKEHFEGDDEFVGVGVDELATACTDSIEELET
Ga0302118_103066303	3300031627	Marine	MSDLSKELGCGSLTGDQVDAITHAWLDLCAIKEHLDAPDEFLGVGAEELLVACEGSIEELEQEFPFLLEGVEDE
Ga0302118_103903261	3300031627	Marine	RLYPMRYGILKKDLKMSDLAKELGCDSLTSDQADAIRNAWLDLCAIKEHLDAPDEFLGVGAEELLAACEGSIEELEQEFPFLLEEV
Ga0302118_104146341	3300031627	Marine	MTDKQIDAIRNAWLDLCASKEHFDSDNEFVGVGADELAVACTDSIKDLENAFPFLLQEDTQCES
Ga0307986_100347561	3300031659	Marine	MSDLSKELGAGSLTSDQSDAIRNAWLDLCAIKEHLDAPDEFIGVGAEELLAACEGSIEELEQEFPFLLE
Ga0302120_103155753	3300031701	Marine	DCLTSDQVDAIRNAWLDLCAIKEHFDAPDEFVGIGADELRAACEGSIEELEQEFPFLLEGVEDV
Ga0315328_104479313	3300031757	Seawater	MSLTIDQVDAITHAWLDLCASQDHFESEEQFTGVGVDELAVACRDSVKELEREFPFLLEGVEDE
Ga0310122_1000049549	3300031800	Marine	MSDLTSDQVDAITHAWLDLCASKEHFESEEQFTGVGADELAVACTDSVEELEEAFPFLLEEAGDE
Ga0310122_100197284	3300031800	Marine	MSLTSDQVDAITHAWLDLCASKDHFESEEQFTGVGVDELAVACTDSVEELEKEFPFLLEGVEDE
Ga0315329_104035282	3300032048	Seawater	MSLTIDQVDAITHAWLDLCASQDHFESEEQFTGVGADELAVACRDSVTELEREFPFLLEGVEDE
Ga0316202_102345062	3300032277	Microbial Mat	MSLTSDQVDAITHAWLDLCASKEHFESEEQFTGVGTDELAAACKGSVEELEKEFPFLLKEIEDE
Ga0315334_100303945	3300032360	Seawater	MGLPIDQVNALTHTSLDLRAVIEHLEAPDEFVGVGASELSVACKDSLEELEKAFPFLLEEVEDE
Ga0315334_103381773	3300032360	Seawater	MGVADISNIMTPEQIDAITHAWLDLCASWEQFESEEQFTGVGADELAVACFESIKELEKAFPFLLEGVEDE
Ga0315334_108949614	3300032360	Seawater	MSLTGDQVDAITHAWLDLCASKEHFESEEQFTGVGADELAVACTDSVEELEKEFPFLLEGVEDE
Ga0315334_112991231	3300032360	Seawater	MSDLPKALGADCLTSDQVDAIRNAWLDLCAIKEHFDAPDEFVGVGANELKAACEGSIEELEQEFPF
Ga0315334_117372281	3300032360	Seawater	VVGKYGATMSLTSDQVDAITHAWLDLCASKEQFESDDQFTGVGADELAVACRDSVEELEKEFPFLLEGVEDE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079935

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences