Metagenome / Metatranscriptome Family F080038

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080038
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	45 residues
Representative Sequence	DVAFYAPKEIYKNQKTVDNVRALRQLSSDRLHQEMVNQQYK
Number of Associated Samples	95
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	92.17 %
% of genes from short scaffolds (< 2000 bps)	91.30 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Duplodnaviria (93.913 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (20.870 % of family members)
Environment Ontology (ENVO)	Unclassified (68.696 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (64.348 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.58% β-sheet: 0.00% Coil/Unstructured: 59.42%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF06941	NT5C	4.35
PF14235	DUF4337	2.61
PF13609	Porin_4	0.87
PF00497	SBP_bac_3	0.87
PF10902	WYL_2	0.87
PF09293	RNaseH_C	0.87
PF01177	Asp_Glu_race	0.87
PF00293	NUDIX	0.87
PF13439	Glyco_transf_4	0.87
PF01176	eIF-1a	0.87
PF00768	Peptidase_S11	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG4502	5'(3')-deoxyribonucleotidase	Nucleotide transport and metabolism [F]	4.35
COG0361	Translation initiation factor IF-1	Translation, ribosomal structure and biogenesis [J]	0.87
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.26 %
Unclassified	root	N/A	1.74 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	98.26 %
Unclassified	root	N/A	1.74 %

Name	Rank	Taxonomy	Distribution
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	93.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.35 %
Unclassified	root	N/A	1.74 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	93.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.35 %
Unclassified	root	N/A	1.74 %

Name	Rank	Taxonomy	Distribution
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	93.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.35 %
Unclassified	root	N/A	1.74 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	93.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.35 %
Unclassified	root	N/A	1.74 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	93.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.35 %
Unclassified	root	N/A	1.74 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	93.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.35 %
Unclassified	root	N/A	1.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000756\|JGI12421J11937_10047786	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1409	Open in IMG/M
3300002408\|B570J29032_109493184	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	808	Open in IMG/M
3300002476\|metazooDRAFT_10775835	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	556	Open in IMG/M
3300002835\|B570J40625_100024109	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	10021	Open in IMG/M
3300002835\|B570J40625_100749512	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	866	Open in IMG/M
3300002835\|B570J40625_101525131	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	548	Open in IMG/M
3300003806\|Ga0007864_1002764	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1765	Open in IMG/M
3300004112\|Ga0065166_10481668	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	524	Open in IMG/M
3300005581\|Ga0049081_10023968	All Organisms → Viruses → Predicted Viral	2317	Open in IMG/M
3300006484\|Ga0070744_10091424	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	881	Open in IMG/M
3300007539\|Ga0099849_1246607	Not Available	658	Open in IMG/M
3300007541\|Ga0099848_1081197	All Organisms → Viruses → Predicted Viral	1264	Open in IMG/M
3300007708\|Ga0102859_1271588	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	511	Open in IMG/M
3300008108\|Ga0114341_10484464	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	564	Open in IMG/M
3300008113\|Ga0114346_1007447	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	10138	Open in IMG/M
3300008267\|Ga0114364_1051179	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1481	Open in IMG/M
3300008962\|Ga0104242_1056533	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	659	Open in IMG/M
3300008996\|Ga0102831_1229703	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	613	Open in IMG/M
3300009124\|Ga0118687_10175560	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	774	Open in IMG/M
3300009155\|Ga0114968_10168638	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1287	Open in IMG/M
3300009158\|Ga0114977_10576724	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	609	Open in IMG/M
3300009159\|Ga0114978_10133999	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1607	Open in IMG/M
3300009159\|Ga0114978_10512584	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	703	Open in IMG/M
3300009159\|Ga0114978_10547408	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	674	Open in IMG/M
3300009159\|Ga0114978_10777898	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	541	Open in IMG/M
3300009181\|Ga0114969_10638908	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	579	Open in IMG/M
3300009182\|Ga0114959_10336525	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	747	Open in IMG/M
3300009183\|Ga0114974_10280890	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	986	Open in IMG/M
3300009187\|Ga0114972_10544532	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	653	Open in IMG/M
3300009187\|Ga0114972_10779784	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	524	Open in IMG/M
3300009684\|Ga0114958_10433898	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	634	Open in IMG/M
3300010156\|Ga0068873_1030131	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	563	Open in IMG/M
3300010158\|Ga0114960_10214920	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	997	Open in IMG/M
3300010354\|Ga0129333_10132900	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2288	Open in IMG/M
3300010354\|Ga0129333_11605969	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	531	Open in IMG/M
3300010885\|Ga0133913_10705597	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2639	Open in IMG/M
3300011995\|Ga0153800_1002128	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1801	Open in IMG/M
3300012017\|Ga0153801_1036602	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	867	Open in IMG/M
3300012348\|Ga0157140_10001484	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2702	Open in IMG/M
3300013004\|Ga0164293_10591027	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	722	Open in IMG/M
3300013005\|Ga0164292_10579652	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	727	Open in IMG/M
3300013372\|Ga0177922_10139530	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	702	Open in IMG/M
3300017697\|Ga0180120_10152852	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	977	Open in IMG/M
3300017754\|Ga0181344_1029312	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1686	Open in IMG/M
3300020048\|Ga0207193_1343835	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1026	Open in IMG/M
3300020151\|Ga0211736_10233468	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	658	Open in IMG/M
3300020151\|Ga0211736_10576944	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1318	Open in IMG/M
3300020151\|Ga0211736_11026194	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	705	Open in IMG/M
3300020159\|Ga0211734_11027616	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1292	Open in IMG/M
3300020160\|Ga0211733_10153434	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	816	Open in IMG/M
3300020160\|Ga0211733_10719465	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	962	Open in IMG/M
3300020161\|Ga0211726_10721842	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	691	Open in IMG/M
3300020161\|Ga0211726_10722313	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1459	Open in IMG/M
3300020162\|Ga0211735_11348305	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	613	Open in IMG/M
3300020498\|Ga0208050_1006502	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1405	Open in IMG/M
3300020513\|Ga0208090_1038161	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	638	Open in IMG/M
3300020540\|Ga0208227_1042966	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	639	Open in IMG/M
3300020554\|Ga0208599_1033817	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	780	Open in IMG/M
3300020562\|Ga0208597_1018850	All Organisms → Viruses → Predicted Viral	1615	Open in IMG/M
3300020573\|Ga0208485_1085368	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	505	Open in IMG/M
3300020716\|Ga0214207_1014493	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	997	Open in IMG/M
3300021140\|Ga0214168_1135259	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	506	Open in IMG/M
3300021962\|Ga0222713_10757382	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	547	Open in IMG/M
3300022179\|Ga0181353_1154008	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	527	Open in IMG/M
3300022752\|Ga0214917_10148088	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1247	Open in IMG/M
3300023179\|Ga0214923_10204508	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1160	Open in IMG/M
3300023311\|Ga0256681_12521805	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	562	Open in IMG/M
3300024514\|Ga0255177_1034308	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	892	Open in IMG/M
3300024548\|Ga0256342_1137755	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	539	Open in IMG/M
3300025357\|Ga0208383_1024045	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	717	Open in IMG/M
3300025655\|Ga0208795_1024400	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1963	Open in IMG/M
3300025872\|Ga0208783_10354437	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	574	Open in IMG/M
3300027162\|Ga0255212_1057789	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	684	Open in IMG/M
3300027659\|Ga0208975_1081523	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	956	Open in IMG/M
3300027697\|Ga0209033_1250048	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	511	Open in IMG/M
3300027741\|Ga0209085_1150491	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	983	Open in IMG/M
3300027754\|Ga0209596_1269355	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	690	Open in IMG/M
3300027759\|Ga0209296_1065637	All Organisms → Viruses → Predicted Viral	1837	Open in IMG/M
3300027759\|Ga0209296_1242966	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	745	Open in IMG/M
3300027760\|Ga0209598_10003771	Not Available	11351	Open in IMG/M
3300027760\|Ga0209598_10195693	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	858	Open in IMG/M
3300027782\|Ga0209500_10193298	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	924	Open in IMG/M
3300027804\|Ga0209358_10566022	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	506	Open in IMG/M
3300027969\|Ga0209191_1110496	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1160	Open in IMG/M
3300027969\|Ga0209191_1209673	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	762	Open in IMG/M
3300028286\|Ga0256331_1104405	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	641	Open in IMG/M
3300028394\|Ga0304730_1067465	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1663	Open in IMG/M
3300031758\|Ga0315907_10046326	All Organisms → Viruses → Predicted Viral	3841	Open in IMG/M
3300031758\|Ga0315907_10395213	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1116	Open in IMG/M
3300031857\|Ga0315909_10111278	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2336	Open in IMG/M
3300031963\|Ga0315901_10901835	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	629	Open in IMG/M
3300032050\|Ga0315906_10972586	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	642	Open in IMG/M
3300032092\|Ga0315905_10807894	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	815	Open in IMG/M
3300032116\|Ga0315903_10188705	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1845	Open in IMG/M
3300032116\|Ga0315903_10247309	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1544	Open in IMG/M
3300032665\|Ga0316221_1136192	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	864	Open in IMG/M
3300033984\|Ga0334989_0533709	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	576	Open in IMG/M
3300034018\|Ga0334985_0012348	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6745	Open in IMG/M
3300034018\|Ga0334985_0665319	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	569	Open in IMG/M
3300034018\|Ga0334985_0673670	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	564	Open in IMG/M
3300034019\|Ga0334998_0662414	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	561	Open in IMG/M
3300034062\|Ga0334995_0704705	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	568	Open in IMG/M
3300034064\|Ga0335001_0455111	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	682	Open in IMG/M
3300034066\|Ga0335019_0326651	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	956	Open in IMG/M
3300034082\|Ga0335020_0581875	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	525	Open in IMG/M
3300034093\|Ga0335012_0591017	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	514	Open in IMG/M
3300034104\|Ga0335031_0204403	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1335	Open in IMG/M
3300034105\|Ga0335035_0494241	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	671	Open in IMG/M
3300034106\|Ga0335036_0445157	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	821	Open in IMG/M
3300034107\|Ga0335037_0276087	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	916	Open in IMG/M
3300034107\|Ga0335037_0312777	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	854	Open in IMG/M
3300034108\|Ga0335050_0474090	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	542	Open in IMG/M
3300034120\|Ga0335056_0464106	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	672	Open in IMG/M
3300034121\|Ga0335058_0346060	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	859	Open in IMG/M
3300034121\|Ga0335058_0405086	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	782	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	89.57%
Marine	Environmental → Aquatic → Marine	9.57%
Sediment	Environmental → Aquatic → Sediment	0.87%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	56.52%
Lentic	Environmental → Aquatic → Freshwater → Lentic	21.74%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	6.96%
Coastal	Environmental → Aquatic → Marine → Coastal	6.09%
River	Environmental → Aquatic → Freshwater → River	3.48%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.74%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.74%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	55.65%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	10.43%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	9.57%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	6.96%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	6.09%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	3.48%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	1.74%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.74%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.74%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.87%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	20.87%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	20.00%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	12.17%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	8.70%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	6.96%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	5.22%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	3.48%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	3.48%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	3.48%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	2.61%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	2.61%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	1.74%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.74%
Lake	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Lake	0.87%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.87%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	0.87%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.87%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.87%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.87%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.87%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002476	Freshwater microbial communities from San Paulo Zoo lake, Brazil - NOV 2012	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003806	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH16Oct07	Environmental	Open in IMG/M
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300007541	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG	Environmental	Open in IMG/M
3300007708	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02	Environmental	Open in IMG/M
3300008108	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NA	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008267	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTR	Environmental	Open in IMG/M
3300008962	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT5	Environmental	Open in IMG/M
3300008996	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747	Environmental	Open in IMG/M
3300009124	Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsf	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental	Open in IMG/M
3300009182	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300009187	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG	Environmental	Open in IMG/M
3300009684	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG	Environmental	Open in IMG/M
3300010156	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel2S_0400h metaG	Environmental	Open in IMG/M
3300010158	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011995	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 880 - Top - Depth 1m	Environmental	Open in IMG/M
3300012017	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Top - Depth 1m	Environmental	Open in IMG/M
3300012348	Freshwater microbial communities from Coldwater Creek, Ontario, Canada - S44	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental	Open in IMG/M
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300020162	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1	Environmental	Open in IMG/M
3300020498	Freshwater microbial communities from Lake Mendota, WI - 13JUN2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020513	Freshwater microbial communities from Lake Mendota, WI - 20JUL2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020540	Freshwater microbial communities from Lake Mendota, WI - 13JUN2011 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020554	Freshwater microbial communities from Lake Mendota, WI - 17AUG2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020562	Freshwater microbial communities from Lake Mendota, WI - 05MAY2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020573	Freshwater microbial communities from Lake Mendota, WI - 17JUL2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020716	Freshwater microbial communities from Trout Bog Lake, WI - 13JUL2009 epilimnion	Environmental	Open in IMG/M
3300021140	Freshwater microbial communities from Lake Mendota, WI - Practice 29OCT2010 epilimnion	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300022179	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N	Environmental	Open in IMG/M
3300022752	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BB	Environmental	Open in IMG/M
3300023179	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510	Environmental	Open in IMG/M
3300023311	Combined Assembly of Gp0281739, Gp0281740, Gp0281741	Environmental	Open in IMG/M
3300024514	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atlam_RepB_8d	Environmental	Open in IMG/M
3300024548	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepB_8d (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025357	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Sep07 (SPAdes)	Environmental	Open in IMG/M
3300025655	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025872	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027162	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Yuk_RepC_8d	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027697	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.DN (SPAdes)	Environmental	Open in IMG/M
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027760	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027804	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027969	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028286	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepA_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028394	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG (v2)	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300032665	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18007	Environmental	Open in IMG/M
3300033984	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Mar2001-rr0030	Environmental	Open in IMG/M
3300034018	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME04Jul2014-rr0021	Environmental	Open in IMG/M
3300034019	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Sep2014-rr0049	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034064	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME14Nov2013-rr0054	Environmental	Open in IMG/M
3300034066	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087	Environmental	Open in IMG/M
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental	Open in IMG/M
3300034093	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jun2014-rr0072	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034105	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127	Environmental	Open in IMG/M
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental	Open in IMG/M
3300034107	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Apr2017-rr0133	Environmental	Open in IMG/M
3300034108	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Jun2014-rr0157	Environmental	Open in IMG/M
3300034120	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2014-rr0172	Environmental	Open in IMG/M
3300034121	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19May2015-rr0174	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12421J11937_100477864	3300000756	Freshwater And Sediment	YAPKEIYKNQVNVDNARVLRQLSSDRLHQDLVNLQYK*
B570J29032_1094931841	3300002408	Freshwater	AFYAPKEIYKGQKNVDNVRALRQMSSDRLHQEMVNQQYKRN*
metazooDRAFT_107758351	3300002476	Lake	KEIYRNQRIVDNARTQRLLSGASDRLHQDLVNSQYNLGK*
B570J40625_1000241091	3300002835	Freshwater	LALKDGQLYKPEEIYKNQVTVDNVRALRQLSSDRVHQEMVNQQYRN*
B570J40625_1007495123	3300002835	Freshwater	YAPKEIYKNQVNVDNARTLRGLQRGSDSLHQEMVNQQYRLGK*
B570J40625_1015251313	3300002835	Freshwater	VAFYAPREIYRNQVNVDNARLLRGLGSDRLHQEMVNQQYKTGN*
Ga0007864_10027641	3300003806	Freshwater	AAFYAPKEIYRNQSTVDNSRALRKLSSDSLFEKMVELQYKESKQ*
Ga0065166_104816681	3300004112	Freshwater Lake	VAFYAPKEIYKNQKVVDNARTLRGLQGGSDKLHQEMVNQQYK*
Ga0049081_100239687	3300005581	Freshwater Lentic	ALADAPFYAPKEIYRNQVNVDNVRVLRQLSSDRLHQDLVNLQYK*
Ga0070744_100914241	3300006484	Estuarine	YAPKEIYRNQINVDNVRLLRSLGNDRLHQEMVNQQYKLRE*
Ga0099849_12466073	3300007539	Aqueous	KEIYKGQVNVDNRRAMRGLGSDRLHQEMVRQQYQ*
Ga0099848_10811971	3300007541	Aqueous	YRGQVNVDNARALRGLGTDRLHQEMVEQQYNRGVR*
Ga0102859_12715881	3300007708	Estuarine	APKEIYRNQVNVDNVRVLRQLSSDKLHQDLVNLQYK*
Ga0114341_104844641	3300008108	Freshwater, Plankton	QAYSTMMPDVAFYAPKEIYKNQVNVDNVRVLRQLSSDRLHQDLVNLQYK*
Ga0114346_100744739	3300008113	Freshwater, Plankton	YFVMMPDVAFYAPKEIYKNQKTVDNVRALRQLSSDRLHQEMVNQQYK*
Ga0114364_10511791	3300008267	Freshwater, Plankton	QGYQAYSMMMPDVAFYAPREIYRNQVNVDNVRLLRGLASDRLHQELVNLQYK*
Ga0104242_10565332	3300008962	Freshwater	FVMMPDVAFYAPKEIYKNQTTVDNVRALRQLSSDRLHQQMVDQQYK*
Ga0102831_12297031	3300008996	Estuarine	QGYGNYLNLALRDASFYEPKEVYRNQTVIDNVRVLRGLGSDQKHQDLVNLQYK*
Ga0118687_101755601	3300009124	Sediment	DASFYAPKEIYKGQVNVDNRRAMRALGSDRLHQEMVGQQYRR*
Ga0114968_101686383	3300009155	Freshwater Lake	DVAFYAPKEIYKNQVNVDNARVLRQLSSDKLHQDLVNLQYK*
Ga0114977_105767242	3300009158	Freshwater Lake	MMPDVAFYAPKEIYRNQKTVDNVRALRQMSSDRLHQQMVDQQYK*
Ga0114978_101339995	3300009159	Freshwater Lake	VSIKDSPFYDIKEVYKNQVNVDNVRLLRSLGSDRLHQEMVNQQYKVGR*
Ga0114978_105125841	3300009159	Freshwater Lake	AAFYTPKEIYRNQTTVDNARALRQLSSDRLHQQMIDQQYK*
Ga0114978_105474081	3300009159	Freshwater Lake	KDVAFYKVEEVYKNQKTVDNMRLLRGLTTGSDRLHQEMINQQYKN*
Ga0114978_107778981	3300009159	Freshwater Lake	KEIYKNQTPVDNARALRQLSTDRLHQQMIEQQYRR*
Ga0114969_106389081	3300009181	Freshwater Lake	YAPKEIYKNQVNVDNARVLRQLSSDKLHQDLINLQYKLRD*
Ga0114959_103365251	3300009182	Freshwater Lake	PKEVYKNQKTVDNVRLLRGLTGGSDRLHQEMVDQQYKRGE*
Ga0114974_102808902	3300009183	Freshwater Lake	QAYSMMMPDVAFYAPKEIYKNQVNVDNARVLRQLSSDRLHQDLVNSQYKLRQ*
Ga0114972_105445322	3300009187	Freshwater Lake	TLKDASFYAPKEIYKNQRTVDNARALRVLSSDRLHQEMIDQQYKGK*
Ga0114972_107797842	3300009187	Freshwater Lake	YRNQVNVDNARLLRALGSDKLHQDLVNLQYKQGE*
Ga0114958_104338981	3300009684	Freshwater Lake	KMYEPREIYKNQKTVDNARALRQLSTDRLHQQMIEQQYRR*
Ga0068873_10301312	3300010156	Freshwater Lake	AFYAPKEIYKNQKIIDNTRVLRQMSSDKLHQDMINLQYK*
Ga0114960_102149201	3300010158	Freshwater Lake	GFDVYSITVMKDGTFYAPKDIYGNQKTIDNARALRSLSSDRLHQEMVDQQYKGK*
Ga0129333_101329003	3300010354	Freshwater To Marine Saline Gradient	MVALTDVAFYAPKEIYRNQKNVDNARALRQLASDRLHQQMVDQQYLPR*
Ga0129333_116059691	3300010354	Freshwater To Marine Saline Gradient	FYAPKEIYRSQKTVDNARALRQLASDRLHQEMVDQQYLPR*
Ga0133913_107055971	3300010885	Freshwater Lake	AVSIKDSPFYDIKEVYKNQVNVDNVRLLRSLGSDRLHQEMVNQQYKVGR*
Ga0153800_10021281	3300011995	Freshwater	FYAPKEIYRNQKTVDNVRALRQMSSDRLHQQMVDQQYK*
Ga0153801_10366021	3300012017	Freshwater	PDASFYAPREIYRNQVNVDNVRLLRGLASDRLHQELVNLQYK*
Ga0157140_100014848	3300012348	Freshwater	VLRDASFYEPKEVYKNQTVVDNIRVLRGLGSDQKHRDLVNLQYK*
Ga0164293_105910273	3300013004	Freshwater	VDIARMATQPQGYQAYSMMMPDVAFYAPREIYRNQVNVDNARVLHQLSSDRLHQDLVNLQYK*
Ga0164292_105796522	3300013005	Freshwater	SQYFFMMPDVAFYAPKEIYRNQTVTDNVRLLRGLGSDRLHQEMVNRQYKLGE*
Ga0177922_101395302	3300013372	Freshwater	YAPKEIYKNQVNVDNARVLRQLSSDKLHQDLVNLQYK*
Ga0180120_101528521	3300017697	Freshwater To Marine Saline Gradient	AQFYAARDIYKGQRTVDNARALRGLGTDRLHQEMINQQYGR
Ga0181344_10293121	3300017754	Freshwater Lake	ITRMAIQPAGYQAYAVAMPDASFYAPREIYRNQVNVDNVRLLRGLASDRLHQELVNLQYK
Ga0207193_13438352	3300020048	Freshwater Lake Sediment	MMPDVAFYAPKEIYKNQKTVDNARALRQMSSDRLHQEMINQQYKIGN
Ga0211736_102334681	3300020151	Freshwater	AFYAPKEIYKNQTNVDNVRLLRSLGSDRLHQEMVNQQYKLGQ
Ga0211736_105769441	3300020151	Freshwater	AFYAPKEIYKNQVNVDNVRLLRGLGSDRLHREMVNQQYAPRN
Ga0211736_110261941	3300020151	Freshwater	ANYSQYFFMLPDVAFYAPKEIYRNQKTVDNVRALRQMSSDSLHQRMVDQQYK
Ga0211734_110276161	3300020159	Freshwater	QAYSFALADAPFYAPKEIYRNQVNVDNVRVLRQLSSDRLHQEMVNQQYAPRN
Ga0211733_101534341	3300020160	Freshwater	FTIKDSPFYDIKEVYKNQVNVDNARALRQMSSDRLHQQLINLQYK
Ga0211733_107194651	3300020160	Freshwater	MAIKDTPFYEIKEVYKNQVNVDNVRVLRGLGSDRLHQELVNQQYKIRN
Ga0211726_107218421	3300020161	Freshwater	DVAFYAPKEIYRNQKTVDNVRALRQMSSDKLHQQMVDQQYK
Ga0211726_107223134	3300020161	Freshwater	DVAFYEPKEVYKNQKTVDNARALRQLSSDRLHQEMINQQYKLGR
Ga0211735_113483051	3300020162	Freshwater	AGYQAYSFALADAPFYAPKEIYRNQVNVDNVRVLRQLSSDKLHQDLVNLQYK
Ga0208050_10065021	3300020498	Freshwater	LSRMAIQPAGYQAYSMIMPDVAFYAPREIYRNQVNVDNTRLLRQLSSDRLHQDLVNLQYK
Ga0208090_10381612	3300020513	Freshwater	LALLDAKFYATREIYGKQTTVDNQRALRQLSSDRLHQQMVNQQYR
Ga0208227_10429662	3300020540	Freshwater	YTPKEIYKNQKTVDNARALRQLSSDKLHQDMVNQQYK
Ga0208599_10338171	3300020554	Freshwater	ASIATQPNGYQSYSMMMPDVAFYAPKEIYKNQVNVDNARVLRGLGSDRLHQEMVNQQYRLGK
Ga0208597_10188501	3300020562	Freshwater	YFTAIPDVAFYTPKEIYKNQKTVDNARALRQLSSDKLHQDMVNQQYK
Ga0208485_10853683	3300020573	Freshwater	SMMMPDVAFYAPKEIYKNQVNVDNARVLRGLGSDRLHQEMVNQQYRLGK
Ga0214207_10144931	3300020716	Freshwater	ALKDASFYAPKEVYKNQKTVDNVRALRQLANDNKHRELVELQYVR
Ga0214168_11352591	3300021140	Freshwater	YSFALADAPFYAPKEIYRNQVNVDNVRVLRQLSSDKLHQDLVNLQYK
Ga0222713_107573822	3300021962	Estuarine Water	APKEIYRNQVNVDNVRVLRQLSSDRLHQDLVNLQYK
Ga0181353_11540081	3300022179	Freshwater Lake	APKEIYKNQKTVDNARTLRGLQGGSDRLHQEMVNQQYK
Ga0214917_101480881	3300022752	Freshwater	YNVSLKDVAFYAPKEIYRNQKTVDNVRALRSLASDRLHQEMVDQQYRR
Ga0214923_102045083	3300023179	Freshwater	LTDVAFYAPKEIYRNQRNVDNARALRQLASDRLHQQMVDQQYLPR
Ga0256681_125218051	3300023311	Freshwater	SEAIYKDQRTVDNARALRQLSSDRLHQEMIAQQYRR
Ga0255177_10343081	3300024514	Freshwater	VGFNSYMIALNDAAFYSPKEIYRNQKTVDNVRALRQLASDKLHQEMVDLQYRR
Ga0256342_11377551	3300024548	Freshwater	DANFYAPKEIYRNQRTVDNARALRQLASDRLHQQMVDQQYLPR
Ga0208383_10240451	3300025357	Freshwater	TLKDASFYEPKEIYRNQTTIDNVRALRQMASDRVYQEMLDMQYKIGEXHDRRN
Ga0208795_10244001	3300025655	Aqueous	PKEIYKNQTTVDNATALRLLNGKSDKLHEELVNQQYGR
Ga0208783_103544371	3300025872	Aqueous	NFNLSNIAFYEPKEIYKNQKVIDNARALRQLSSDRLHQEMVEQQYRR
Ga0255212_10577891	3300027162	Freshwater	YAPKEIYRGQKNVDNARALRQLGSDRLHQEMVEQQYRR
Ga0208975_10815233	3300027659	Freshwater Lentic	ADAPFYAPKEIYRNQVNVDNVRVLRQLSSDRLHQDLVNLQYK
Ga0209033_12500481	3300027697	Freshwater Lake	FDSYMVALTDASFYSPKEIYRNQKTVDNVRALRQLASDRLHQQMVDQQYLPR
Ga0209085_11504911	3300027741	Freshwater Lake	EPKEVYKNQKTVDNVRLLRGLTGGSDRLHQEMVDQQYKRGE
Ga0209596_12693551	3300027754	Freshwater Lake	YAPKEIYKNQVNVDNARVLRQLSSDKLHQDLINLQYKLRD
Ga0209296_10656375	3300027759	Freshwater Lake	MMPDVAFYAPKEIYKNQVNVDNARVLRQLSSDKLHQDLVNLQYK
Ga0209296_12429662	3300027759	Freshwater Lake	QAYSMMMPDVAFYAPKEIYKNQVNVDNARVLRQLSSDRLHQDLVNSQYKLRQ
Ga0209598_100037711	3300027760	Freshwater Lake	APKEIYKNQRTVDNARALRVLSSDRLHQEMIDQQYKGK
Ga0209598_101956933	3300027760	Freshwater Lake	APKEIYKNQRTVDNARALRVLSSDRLHQEMIDQQYKVKN
Ga0209500_101932981	3300027782	Freshwater Lake	YEPKEVYKNQKTVDNVQVLRQLSSDSLHKQMVDQQYKRGE
Ga0209358_105660221	3300027804	Freshwater Lake	MVVPQGYASYTNLALRDANFYEPKEVYRNQQVVDNVRVLRGLGSDQKHRDLVNLQYK
Ga0209191_11104961	3300027969	Freshwater Lake	APKEIYRNQVNVDNVRLLRGLGSDRLHQDLVNQQYKLRN
Ga0209191_12096731	3300027969	Freshwater Lake	KEIYKNQKVVDNARTLRGLQGGSDKLHQDMVNQQYK
Ga0256331_11044052	3300028286	Freshwater	MVALTDASFYSPKEIYRNQKTFDNVRALRQLASDRLHQQMVDQQYLPR
Ga0304730_10674651	3300028394	Freshwater Lake	YSMALPDVAFYAPREIYRNQVNVDNARVLRQLSSDRLHQDLVNLQYK
Ga0315907_1004632611	3300031758	Freshwater	NAYNIALKDVAFYAPKEIYRNQKTIDNARALRQLASDKLHQEMVDMQYRR
Ga0315907_103952134	3300031758	Freshwater	FYAPKEIYKNQKTVDNVRALRQLSSDRLHQEMVNQQYK
Ga0315909_101112781	3300031857	Freshwater	DVAFYAPKEIYKNQKTVDNVRALRQLSSDRLHQEMVNQQYK
Ga0315901_109018352	3300031963	Freshwater	FYAPKEIYKGQKTVDNARALRQLSSDTLHQRMIEQQYNRR
Ga0315906_109725863	3300032050	Freshwater	QFYAPREIYRNQRTVDNARALRQLTNDGRHREMVEQQYKRN
Ga0315905_108078941	3300032092	Freshwater	TQPQGYQAYSFALADAPFYAPKEIYRNQVNVDNVRVLRQLSSDRLHQDLVNLQYK
Ga0315903_101887051	3300032116	Freshwater	SILRDVAFYKPDEIYKGQRTVDNVRALRQLSSDRLHQEMVNQQYRD
Ga0315903_102473095	3300032116	Freshwater	APFYAPKEIYRNQVNVDNVRVLRQLSSDKLHQDLVNLQYK
Ga0316221_11361923	3300032665	Freshwater	LNFTLKDAAFYAPKEIYRNQSTVDNSRALRKLSSDSLFEKMVELQYKESKQ
Ga0334989_0533709_1_108	3300033984	Freshwater	PKEIYRNQKTVDNVRALRQMSSDRLHQQMVDQQYK
Ga0334985_0012348_6633_6743	3300034018	Freshwater	APKEIYRNQVNVDNARVLRQLSSDRLHQELVNLQYK
Ga0334985_0665319_3_128	3300034018	Freshwater	AFYAPKEIYKNQKVVDNARTLRGLQGGSDRLHQEMVNQQYK
Ga0334985_0673670_407_541	3300034018	Freshwater	MMPDVAFYAPKEIYKNQKTVDNVRALRQLSSDRLHQEMVNQQYK
Ga0334998_0662414_27_170	3300034019	Freshwater	MIPDVAFYAPKEIYKNQKTIDNARALRLLSSDRLHQQMIDKQYKLGE
Ga0334995_0704705_403_567	3300034062	Freshwater	QPPGYQAYSMMMPDVAFYAPKEIYRNQVNVDNVRVLRQLSSDRLHQDLVNLQYK
Ga0335001_0455111_8_181	3300034064	Freshwater	MATQPQGYQAYSFALADAPFYAPKEIYRNQVNVDNVRVLRQLSSDKLHQDLVNLQYK
Ga0335019_0326651_842_955	3300034066	Freshwater	YAPKEIYKNQKTVDNVRALRQLSSDRLHQEMVNQQYK
Ga0335020_0581875_3_176	3300034082	Freshwater	IARQPAGYQTYSVAMPDVAFYAPKEIYRNQVNVDNVRLLRGLSSDRLHQQMIDMQYK
Ga0335012_0591017_26_199	3300034093	Freshwater	MATQPQGYQAYSMMMPDVAFYAPKEIYRNQVNVDNVRVLRQLSSDKLHQDLVNLQYK
Ga0335031_0204403_1221_1334	3300034104	Freshwater	YATREIYGRQTTVDNQRALRQLSSDRLHQQMVNQQYK
Ga0335035_0494241_543_671	3300034105	Freshwater	PDVAFYAPREIYRNQVNVDNARVLRQLSSDRLHQELVNLQYK
Ga0335036_0445157_1_150	3300034106	Freshwater	SQYFFMLQDVAFYAPKEIYKNQKTVDNVRALRQMSSDKLHQDLVNLQYK
Ga0335037_0276087_664_798	3300034107	Freshwater	MLQDVAFYAPKEIYKNQKTVDNVRALRQMSSDKLHQDLVNLQYK
Ga0335037_0312777_688_852	3300034107	Freshwater	QPANYAQYFTAIPDVAFYTPKEIYKNQKTVDNARALRQLSSDKLHQDMVNQQYK
Ga0335050_0474090_365_541	3300034108	Freshwater	SIAKQPANYAQYFVMMPDVAFYAPKEIYRNQKTVDNVRALRQMSSDKLHQDLVNLQYK
Ga0335056_0464106_547_672	3300034120	Freshwater	DAPFYAPKEIYRNQVNVDNVRVLRQLSSDRLHQDLVNLQYK
Ga0335058_0346060_723_857	3300034121	Freshwater	DVAFYAPKEIYRNQKNVDNTRLLRQLASDAKHQQMVNLQYGEKQ
Ga0335058_0405086_619_753	3300034121	Freshwater	MMPDVAFYAPKEIYRNQKTVDNVRALRQMSSDKLHQDMVNQQYK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080038

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences