NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F080058

Metagenome / Metatranscriptome Family F080058

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F080058
Family Type Metagenome / Metatranscriptome
Number of Sequences 115
Average Sequence Length 50 residues
Representative Sequence MNEYKVELIHEPSGAYMNFVMFSETKEDEVALAKEIWADMSVVVLDYIEGEE
Number of Associated Samples 81
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 78.26 %
% of genes near scaffold ends (potentially truncated) 28.70 %
% of genes from short scaffolds (< 2000 bps) 73.91 %
Associated GOLD sequencing projects 72
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (60.870 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine
(14.783 % of family members)
Environment Ontology (ENVO) Unclassified
(51.304 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(59.130 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 26.92%    β-sheet: 40.38%    Coil/Unstructured: 32.69%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 115 Family Scaffolds
PF14025DUF4241 7.83
PF06067DUF932 5.22
PF136402OG-FeII_Oxy_3 1.74
PF12849PBP_like_2 0.87
PF13578Methyltransf_24 0.87


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A60.87 %
All OrganismsrootAll Organisms39.13 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2199352005|2199920127Not Available515Open in IMG/M
3300000736|JGI12547J11936_1055082Not Available793Open in IMG/M
3300002408|B570J29032_109552295Not Available865Open in IMG/M
3300002835|B570J40625_100002773Not Available32802Open in IMG/M
3300002835|B570J40625_100151240Not Available2648Open in IMG/M
3300002835|B570J40625_100572358All Organisms → Viruses → Predicted Viral1041Open in IMG/M
3300002835|B570J40625_101186835Not Available640Open in IMG/M
3300003488|JGI25919J51413_1021735All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage506Open in IMG/M
3300003616|JGI25928J51866_1012622All Organisms → Viruses → Predicted Viral2427Open in IMG/M
3300004112|Ga0065166_10187989Not Available808Open in IMG/M
3300004125|Ga0066182_10014281All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA1021565Open in IMG/M
3300005517|Ga0070374_10468426All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage630Open in IMG/M
3300005581|Ga0049081_10230063Not Available656Open in IMG/M
3300005582|Ga0049080_10092246All Organisms → Viruses → Predicted Viral1032Open in IMG/M
3300005582|Ga0049080_10272309Not Available549Open in IMG/M
3300005583|Ga0049085_10190361All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage683Open in IMG/M
3300005584|Ga0049082_10018228All Organisms → Viruses → Predicted Viral2417Open in IMG/M
3300005662|Ga0078894_10026762Not Available4719Open in IMG/M
3300005662|Ga0078894_10422736Not Available1202Open in IMG/M
3300005662|Ga0078894_10613615Not Available968Open in IMG/M
3300005662|Ga0078894_11629628Not Available531Open in IMG/M
3300005805|Ga0079957_1025232Not Available4041Open in IMG/M
3300005941|Ga0070743_10026831Not Available1993Open in IMG/M
3300006484|Ga0070744_10000666Not Available10049Open in IMG/M
3300006484|Ga0070744_10002018Not Available6135Open in IMG/M
3300006484|Ga0070744_10015748Not Available2240Open in IMG/M
3300006484|Ga0070744_10075206Not Available980Open in IMG/M
3300006484|Ga0070744_10104782Not Available817Open in IMG/M
3300006484|Ga0070744_10230063All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage525Open in IMG/M
3300006805|Ga0075464_10692550Not Available630Open in IMG/M
3300007555|Ga0102817_1162667Not Available500Open in IMG/M
3300007629|Ga0102895_1194396Not Available527Open in IMG/M
3300007653|Ga0102868_1042546Not Available989Open in IMG/M
3300007667|Ga0102910_1078460Not Available761Open in IMG/M
3300007708|Ga0102859_1118721All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage767Open in IMG/M
3300008107|Ga0114340_1113642Not Available1060Open in IMG/M
3300008111|Ga0114344_1039312All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA1021854Open in IMG/M
3300008950|Ga0102891_1034190Not Available1599Open in IMG/M
3300009058|Ga0102854_1132338Not Available714Open in IMG/M
3300009152|Ga0114980_10005196Not Available8673Open in IMG/M
3300009152|Ga0114980_10027028All Organisms → Viruses → Predicted Viral3556Open in IMG/M
3300009183|Ga0114974_10796993Not Available507Open in IMG/M
3300009419|Ga0114982_1209695Not Available604Open in IMG/M
3300009466|Ga0126448_1001662Not Available6427Open in IMG/M
3300012665|Ga0157210_1002950All Organisms → Viruses → Predicted Viral4116Open in IMG/M
3300012665|Ga0157210_1008941All Organisms → Viruses → Predicted Viral1822Open in IMG/M
3300013092|Ga0163199_1128704Not Available1039Open in IMG/M
3300013372|Ga0177922_11230573All Organisms → Viruses → Predicted Viral1253Open in IMG/M
3300014811|Ga0119960_1042895Not Available719Open in IMG/M
3300017777|Ga0181357_1106919All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1057Open in IMG/M
3300020141|Ga0211732_1077150All Organisms → Viruses → Predicted Viral1860Open in IMG/M
3300020141|Ga0211732_1125963All Organisms → Viruses → Predicted Viral2399Open in IMG/M
3300020141|Ga0211732_1481089All Organisms → Viruses → Predicted Viral2716Open in IMG/M
3300020141|Ga0211732_1569832All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage911Open in IMG/M
3300020151|Ga0211736_10157244Not Available1054Open in IMG/M
3300020151|Ga0211736_10157399Not Available676Open in IMG/M
3300020151|Ga0211736_10787269All Organisms → Viruses → Predicted Viral1005Open in IMG/M
3300020160|Ga0211733_10147101All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage814Open in IMG/M
3300020160|Ga0211733_11116173All Organisms → Viruses → Predicted Viral1302Open in IMG/M
3300020492|Ga0208483_1016259Not Available862Open in IMG/M
3300020530|Ga0208235_1012881All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1058Open in IMG/M
3300020531|Ga0208487_1007874All Organisms → Viruses → Predicted Viral1455Open in IMG/M
3300020536|Ga0207939_1031406All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage694Open in IMG/M
3300020557|Ga0208231_1053016All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage628Open in IMG/M
3300021325|Ga0210301_1115185All Organisms → Viruses → Predicted Viral1081Open in IMG/M
3300021962|Ga0222713_10002692Not Available18766Open in IMG/M
3300022553|Ga0212124_10058610All Organisms → Viruses → Predicted Viral2246Open in IMG/M
3300024346|Ga0244775_10007617Not Available10571Open in IMG/M
3300024346|Ga0244775_10021564Not Available5856Open in IMG/M
3300024346|Ga0244775_10077546All Organisms → Viruses → Predicted Viral2843Open in IMG/M
3300024346|Ga0244775_10426249Not Available1089Open in IMG/M
3300024346|Ga0244775_10797131Not Available756Open in IMG/M
3300024348|Ga0244776_10252545Not Available1226Open in IMG/M
3300027186|Ga0208797_1003316All Organisms → Viruses → Predicted Viral2543Open in IMG/M
3300027212|Ga0208554_1036403Not Available789Open in IMG/M
3300027221|Ga0208557_1025126All Organisms → Viruses → Predicted Viral1085Open in IMG/M
3300027225|Ga0208025_1019909All Organisms → Viruses → Predicted Viral1183Open in IMG/M
3300027229|Ga0208442_1009331All Organisms → Viruses → Predicted Viral1921Open in IMG/M
3300027238|Ga0208808_1027000Not Available729Open in IMG/M
3300027240|Ga0208444_1017912Not Available1010Open in IMG/M
3300027241|Ga0208805_1021281Not Available1268Open in IMG/M
3300027493|Ga0255103_1052709Not Available703Open in IMG/M
3300027563|Ga0209552_1058176Not Available1085Open in IMG/M
3300027586|Ga0208966_1061570All Organisms → Viruses → Predicted Viral1059Open in IMG/M
3300027586|Ga0208966_1127844Not Available683Open in IMG/M
3300027631|Ga0208133_1012709Not Available2276Open in IMG/M
3300027707|Ga0209443_1065200All Organisms → Viruses → Predicted Viral1445Open in IMG/M
3300027707|Ga0209443_1101804Not Available1089Open in IMG/M
3300027710|Ga0209599_10158286Not Available604Open in IMG/M
3300027754|Ga0209596_1158789Not Available999Open in IMG/M
3300027763|Ga0209088_10016243Not Available3919Open in IMG/M
3300027763|Ga0209088_10326971Not Available613Open in IMG/M
3300027797|Ga0209107_10019921All Organisms → Viruses → Predicted Viral3844Open in IMG/M
3300027797|Ga0209107_10036191All Organisms → Viruses → Predicted Viral2819Open in IMG/M
3300027797|Ga0209107_10047762Not Available2421Open in IMG/M
3300027805|Ga0209229_10154808Not Available1032Open in IMG/M
3300027808|Ga0209354_10219439Not Available768Open in IMG/M
3300027836|Ga0209230_10122808Not Available1462Open in IMG/M
3300027892|Ga0209550_10074084Not Available2635Open in IMG/M
3300027892|Ga0209550_10334004Not Available961Open in IMG/M
3300027892|Ga0209550_10584445All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage658Open in IMG/M
3300027973|Ga0209298_10003749Not Available8999Open in IMG/M
3300028025|Ga0247723_1013093All Organisms → Viruses → Predicted Viral3089Open in IMG/M
3300028025|Ga0247723_1041656All Organisms → Viruses → Predicted Viral1362Open in IMG/M
3300028027|Ga0247722_10023556All Organisms → Viruses → Predicted Viral2514Open in IMG/M
3300033992|Ga0334992_0081458Not Available1763Open in IMG/M
3300033992|Ga0334992_0275339Not Available799Open in IMG/M
3300033994|Ga0334996_0514990Not Available532Open in IMG/M
3300034022|Ga0335005_0372094Not Available828Open in IMG/M
3300034062|Ga0334995_0223703Not Available1289Open in IMG/M
3300034066|Ga0335019_0293116All Organisms → Viruses → Predicted Viral1023Open in IMG/M
3300034071|Ga0335028_0184735All Organisms → Viruses → Predicted Viral1302Open in IMG/M
3300034107|Ga0335037_0716249Not Available521Open in IMG/M
3300034110|Ga0335055_0093635All Organisms → Viruses → Predicted Viral1376Open in IMG/M
3300034110|Ga0335055_0103524Not Available1301Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake14.78%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine14.78%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine11.30%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater10.43%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater8.70%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater6.96%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic6.09%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake6.09%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater2.61%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment2.61%
Deep Subsurface SedimentEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment2.61%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment1.74%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton1.74%
FreshwaterEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater1.74%
Deep SubsurfaceEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface1.74%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment0.87%
LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake0.87%
AquaticEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Aquatic0.87%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater0.87%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous0.87%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.87%
Meromictic PondEnvironmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond0.87%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2199352005Freshwater microbial communities from Lake Mendota, WI - Practice 29OCT2010 epilimnionEnvironmentalOpen in IMG/M
3300000736Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB epilimnion July 2011EnvironmentalOpen in IMG/M
3300002408Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)EnvironmentalOpen in IMG/M
3300002835Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)EnvironmentalOpen in IMG/M
3300003488Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DNEnvironmentalOpen in IMG/M
3300003616Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.DNEnvironmentalOpen in IMG/M
3300004112Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)EnvironmentalOpen in IMG/M
3300004125Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (version 2)EnvironmentalOpen in IMG/M
3300005517Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)EnvironmentalOpen in IMG/M
3300005581Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRFEnvironmentalOpen in IMG/M
3300005582Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRFEnvironmentalOpen in IMG/M
3300005583Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRFEnvironmentalOpen in IMG/M
3300005584Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRFEnvironmentalOpen in IMG/M
3300005662Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)EnvironmentalOpen in IMG/M
3300005805Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USAEnvironmentalOpen in IMG/M
3300005941Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697EnvironmentalOpen in IMG/M
3300006484Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535EnvironmentalOpen in IMG/M
3300006805Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNAEnvironmentalOpen in IMG/M
3300007555Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.555EnvironmentalOpen in IMG/M
3300007629Estuarine microbial communities from the Columbia River estuary - metaG 1554B-3EnvironmentalOpen in IMG/M
3300007653Estuarine microbial communities from the Columbia River estuary - metaG 1546C-3EnvironmentalOpen in IMG/M
3300007667Estuarine microbial communities from the Columbia River estuary - metaG 1558A-3EnvironmentalOpen in IMG/M
3300007708Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02EnvironmentalOpen in IMG/M
3300008107Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NAEnvironmentalOpen in IMG/M
3300008111Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-C-NAEnvironmentalOpen in IMG/M
3300008950Estuarine microbial communities from the Columbia River estuary - metaG 1552A-02EnvironmentalOpen in IMG/M
3300009058Estuarine microbial communities from the Columbia River estuary - metaG 1370A-02EnvironmentalOpen in IMG/M
3300009152Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaGEnvironmentalOpen in IMG/M
3300009183Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaGEnvironmentalOpen in IMG/M
3300009419Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FTEnvironmentalOpen in IMG/M
3300009466Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 2m depth; DNA IDBA-UDEnvironmentalOpen in IMG/M
3300012665Freshwater microbial communities from Talbot River, Ontario, Canada - S11EnvironmentalOpen in IMG/M
3300013092Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_150mEnvironmentalOpen in IMG/M
3300013372Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPsEnvironmentalOpen in IMG/M
3300014811Aquatic viral communities from ballast water - Michigan State University - AB_ballast waterEnvironmentalOpen in IMG/M
3300017777Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300020141Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1EnvironmentalOpen in IMG/M
3300020151Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1EnvironmentalOpen in IMG/M
3300020160Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1EnvironmentalOpen in IMG/M
3300020492Freshwater microbial communities from Lake Mendota, WI - 01JUN2011 deep hole epilimnion ns (SPAdes)EnvironmentalOpen in IMG/M
3300020530Freshwater microbial communities from Lake Mendota, WI - 22OCT2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020531Freshwater microbial communities from Lake Mendota, WI - 21SEP2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020536Freshwater microbial communities from Lake Mendota, WI - 02JUN2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020557Freshwater microbial communities from Lake Mendota, WI - 15JUN2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300021325Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1033 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300022553Powell_combined assemblyEnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
33000243480.2um to 3um size fraction coassemblyEnvironmentalOpen in IMG/M
3300027186Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.555 (SPAdes)EnvironmentalOpen in IMG/M
3300027212Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02 (SPAdes)EnvironmentalOpen in IMG/M
3300027221Estuarine microbial communities from the Columbia River estuary - metaG 1548A-3 (SPAdes)EnvironmentalOpen in IMG/M
3300027225Estuarine microbial communities from the Columbia River estuary - metaG 1549A-3 (SPAdes)EnvironmentalOpen in IMG/M
3300027229Estuarine microbial communities from the Columbia River estuary - metaG 1549B-3 (SPAdes)EnvironmentalOpen in IMG/M
3300027238Estuarine microbial communities from the Columbia River estuary - metaG 1555C-3 (SPAdes)EnvironmentalOpen in IMG/M
3300027240Estuarine microbial communities from the Columbia River estuary - metaG 1555A-3 (SPAdes)EnvironmentalOpen in IMG/M
3300027241Estuarine microbial communities from the Columbia River estuary - metaG 1553A-02 (SPAdes)EnvironmentalOpen in IMG/M
3300027493Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepB_0hEnvironmentalOpen in IMG/M
3300027563Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (SPAdes)EnvironmentalOpen in IMG/M
3300027586Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027631Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes)EnvironmentalOpen in IMG/M
3300027707Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD (SPAdes)EnvironmentalOpen in IMG/M
3300027710Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)EnvironmentalOpen in IMG/M
3300027754Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027763Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027797Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)EnvironmentalOpen in IMG/M
3300027805Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)EnvironmentalOpen in IMG/M
3300027808Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)EnvironmentalOpen in IMG/M
3300027836Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300027892Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027973Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300028025Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FCEnvironmentalOpen in IMG/M
3300028027Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 3H_FCEnvironmentalOpen in IMG/M
3300033992Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Jun2014-rr0035EnvironmentalOpen in IMG/M
3300033994Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046EnvironmentalOpen in IMG/M
3300034022Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Apr2018-rr0058EnvironmentalOpen in IMG/M
3300034062Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045EnvironmentalOpen in IMG/M
3300034066Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087EnvironmentalOpen in IMG/M
3300034071Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Oct2008D10-rr0110EnvironmentalOpen in IMG/M
3300034107Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Apr2017-rr0133EnvironmentalOpen in IMG/M
3300034110Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Jun2009D10-rr0171EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
22001108552199352005FreshwaterMNEYTVELIHEPSGAHMNFVMFSDVKQDEVALAKEIWADMSVVVLDYVEEEE
JGI12547J11936_105508233300000736Freshwater And SedimentMNEYTVELIHEPSGAHMNFVMFSDTKEDEIELAREIWADMSVVVLDYVEGEE*
B570J29032_10955229533300002408FreshwaterMNKYEVEVIHEPSGAHMSFIMFSETNEDEIELAKEIWADMSVIVLDYVEGEE*
B570J40625_100002773253300002835FreshwaterMNSYEIELIHEPSGAYMNFILFSELKQDDIDVAETIWADMSVIVLDYKEGDE*
B570J40625_10015124063300002835FreshwaterMNEYTVELIHEPSGAHMNFVMFSDVKQDEVALAKEIWADMSVVVLDYVEEEE*
B570J40625_10057235823300002835FreshwaterMNKYEVEVIHEPSGAYMNFVMFSETNEDEIELAKEIWADMSVVILDYKEGVEE*
B570J40625_10118683523300002835FreshwaterMNQYEIELIHEPSGAYMNFILFSELEQDDIDVAETIWADMSVVVLDYKEGDE*
JGI25919J51413_102173513300003488Freshwater LakeMNSYEIELIHEPSGAYMNFILFSELKEDDIDVAETIWADMSVVVXXYKEGDE*
JGI25928J51866_101262223300003616Freshwater LakeMNSYEIELIHEPSGAYMNFILFSELKEDDIDVAETIWADMSVVVXDYKEGDE*
Ga0065166_1018798923300004112Freshwater LakeMNEYTVELIHEPSGAYMNFVMFSDLKQDEVALAKEIWADMSVVVLDYVEGEE*
Ga0066182_1001428113300004125Freshwater LakeYKIELIHELSGAYMNFSLFTEEEQDEVALAKEIWSDMSVVVLDSIKEED*
Ga0070374_1046842623300005517Freshwater LakeMNSYEIELIHEPSGAYMNFILFSELKEDDIDVAETIWADMSVVVLDYKEGDE*
Ga0049081_1023006313300005581Freshwater LenticMNQYEIELIHEPSGAYMNFILFSELKQDDIDVAETIWADMSV
Ga0049080_1009224613300005582Freshwater LenticMNSYEIELIHEPSGAYMNFILFSELKQDDIDVAETIWADMSVIV
Ga0049080_1027230913300005582Freshwater LenticMNQYEIELIHEPSGAYMNFILFSELKQDDIDVAETIWADMSVIV
Ga0049085_1019036123300005583Freshwater LenticMNSYEIELIHEPSGAYMNFILFSELKEDDIDVAETIWADMSVIVLDYKEGDE*
Ga0049082_1001822843300005584Freshwater LenticMGNYTIELIHEPSGAHMNFVMFSETENNEVELAKEIWSDMSVVVLDYEEGEE*
Ga0078894_10026762133300005662Freshwater LakeMNEYTVELIHEPSGAHMNFVMFSDLKEDEVQLSKEIWADMSVVVLDYVEGEE*
Ga0078894_1042273633300005662Freshwater LakeMNEYTVELIHEPSGAYMNFVVFSDVKQDEVALAKEIWSDMSVVVLDYVEGEE*
Ga0078894_1061361543300005662Freshwater LakeMNEYTVELIHEPSGAHMNFVVFSDLKEDEIQLSKEIWADMSVVVLDYVEGEE*
Ga0078894_1162962833300005662Freshwater LakeVNEYKIELIHEPSGAYMNFVMFSETKEDEVALAKEIWADMSVVVLDYIEEEE*
Ga0079957_102523273300005805LakeMNEYKVELIHEPSGAYMNFVMFSETKEDEVALAKEIWADMSVVVLDYIEGEE*
Ga0070743_1002683113300005941EstuarineMNEYTVELIHEPSGAHMNFVMFSDTKEDEIELAKEIWAEMSVVVLDYVEEED*
Ga0070744_10000666263300006484EstuarineMIEYKIELIHEPSGAYMNFALFTEEEQDEVTLAKEIWSDMSVVVLDSIKEED*
Ga0070744_10002018103300006484EstuarineMNEYTVELIHEPSGAYMNFIVFSDVKQDEVALAKEIWSDMSVVVLDYVEGEE*
Ga0070744_1001574853300006484EstuarineMHEYKIELIHEPSGAYMNFVMFSETKEDEVALAKEIWADMSVVVLDYVEGEE*
Ga0070744_1007520613300006484EstuarinePSGAHMNFVMFSDTKEDEIELAREIWADMSVVVLDYVEGEE*
Ga0070744_1010478223300006484EstuarineMNSYEIELIHEPSGAYMNFILFSELKQDDIKVAEEIWADMSVIVLDYKEGDE*
Ga0070744_1023006323300006484EstuarineMNQYEVELIHEPSGAHMSFIMFTETSNDEIALAEEIWADMSVVVLDYKEGDE*
Ga0075464_1069255023300006805AqueousHEPSGAHMSFVMFSDVKQDEVALAKEIWADMSVVVLDYIEGEE*
Ga0102817_116266713300007555EstuarineMNEYTVELIHEPSGAHMNFVMFSDTKEDEIELAKEIWAEMSVVVLDYIEEEE*
Ga0102895_119439633300007629EstuarineMNEYTVELIHEPSGAHMNFVMFSDTKEDEIELAKEIWAEMSVVVLDYVEEE
Ga0102868_104254613300007653EstuarineMNEYTVELIHEPSGAHMNFVMFSDTKEDEIELAKEIRAEMSVVVLDYNEEEE*
Ga0102910_107846033300007667EstuarineVELIHEPSGAHMNFVMFSDTKEDEIELAKEIWAEMSVVVLDYVEEED*
Ga0102859_111872123300007708EstuarineMNSYEIELIHEPSGAYMNFILFSELKQDDIDVAEAVWADMSVIVLDYKEGDE*
Ga0114340_111364233300008107Freshwater, PlanktonMNKYEVEVIHEPSGAYMNFVMFSETNEDEIELAKEIWADMSVVILDYEEGVEE*
Ga0114344_103931253300008111Freshwater, PlanktonEPSGAHMNFVMFSDLKEDEVQLSKEIWADMSVVVLDYIEGEE*
Ga0102891_103419033300008950EstuarineMNFVMFSDTKEDEIELAKEIWAEMSVVVLDYIEEEE*
Ga0102854_113233813300009058EstuarineMGNYTIELIHEPSGAHMNFVMFSETENNEVELAKEIWSDMSVVVLDYEEGEK*
Ga0114980_1000519653300009152Freshwater LakeMNEYEVELIHEPSGAHMSFIMFSETKEDEIELAKEIWADISVVVLDYKEGEE*
Ga0114980_1002702843300009152Freshwater LakeMNEYKIELIHEPSGAYMNFTLFSETKEDEVALAKEIWADMSVVVLDYIEGEE*
Ga0114974_1079699323300009183Freshwater LakeMNEYEVELIHEPSGAHMSFIMFSETKEDEIELAKEIWADMSVVVLDYKEGDE*
Ga0114982_120969523300009419Deep SubsurfaceMSQYTVELIHEPSGAYMNFVMFSEIENDEVQLAKEIWSDMSVVVLDYVEGEE*
Ga0126448_1001662103300009466Meromictic PondMNQYEVELIHEPSGAHMSFIMFSETKEDEIKLSEEIWADMSVVVLDYIEEEE*
Ga0157210_100295053300012665FreshwaterVNEYKIELIHEPSGAYMNFVMFSETKEDEVALAKEIWADMSVVVLDCIEEEE*
Ga0157210_100894173300012665FreshwaterMNEYTVELIHEPSGAYMNFVMFSDLKEDEVQLSKEIWADMSVVVLDYKEGEE*
Ga0163199_112870433300013092FreshwaterMNEYEVELIHEPSGAHMSFIMFSETKEDEIELAKEIWADISVVVLDHKEGDE*
Ga0177922_1123057323300013372FreshwaterMNSYEIELIHEPSGAYMNFVLFSELKQDDIDVAETIWADMSVIVLDYKEGDE*
Ga0119960_104289513300014811AquaticHCCFPVTIGGAYMNFVMFSEIENDEVQLAKEIWSDMSVVVLDYVEGEE*
Ga0181357_110691913300017777Freshwater LakeKDNMNSYEIELIHEPSGAYMNFILFSELKEDDIDVAETIWADMSVIVLDYKEGDE
Ga0211732_107715023300020141FreshwaterVRIGKEMNEYTVELIHEPSGAYMNFVMFSEVEQDEVALAKEIWADMSVVVLDYIEGEE
Ga0211732_112596323300020141FreshwaterMNEYEVELIHEPSGAHMSFIMFSETKEDEIELAKEIWADMSVIVLDYKEGDE
Ga0211732_1481089103300020141FreshwaterMNEYTVELIHEPSGAHMNFVMFSDLKEDEVQLSKEIWADMSVVVLDYIEGEE
Ga0211732_156983223300020141FreshwaterMNQYEIELIHEPSGAHMSFIMFTETSSDEIALAEEIWADMSVVVLDYKEGDE
Ga0211736_1015724423300020151FreshwaterMNEYEVELIHEPSGAHMSFIMFSETKEDEIELAKEIWADMSVVVLDYKEGDE
Ga0211736_1015739923300020151FreshwaterMNEYEVELIHEPSGAHMSFIMFSETKEDEIELSKEIWADMSVIVLDYKEGDE
Ga0211736_1078726923300020151FreshwaterMNKYEVEVIHEPSGAYMNFVMFSETNEDEIELAKEIWADMSVVILDYVEGVEE
Ga0211733_1014710133300020160FreshwaterMMMNQYEIELIHEPSGAHMSFIMFTETSSDEIALAEEIWADMSVVVLDYKEGDE
Ga0211733_1111617343300020160FreshwaterMNEYTVELIHEPSGAHMNFVMFSDLKEDEVQLSKEIWADMSVVVLDYVEGEE
Ga0208483_101625913300020492FreshwaterEYTVELIHEPSGAHMNFVMFSDLKEDEVQLSKEIWADMSVVVLDYVEGEE
Ga0208235_101288133300020530FreshwaterNMNSYEIELIHEPSGAYMNFILFSELKQDDIDVAETIWADMSVIVLDYKEGDE
Ga0208487_100787453300020531FreshwaterMNKYEVEVIHEPSGAHMSFIMFSETNEDEIELAKEIWADMSVIVLDYVEGEE
Ga0207939_103140623300020536FreshwaterMNQYEIELIHEPSGAYMNFILFSELKQDDIDVAESIWADMSVIVLDYKEGDE
Ga0208231_105301613300020557FreshwaterDMNSYEIELIHEPSGAYMNFILFSELKQDDIDVAETIWADMSVIVLDYKEGDE
Ga0210301_111518533300021325EstuarineMNEYTVELIHEPSGAHMNFVMFSDTKEDEIELAKEIWAEMSVVVLDYVEEED
Ga0222713_10002692193300021962Estuarine WaterMNSYEIELIHEPSGAYMNFILFSELKQDDIDVAETIWADMSVVVLDYKEGDE
Ga0212124_1005861083300022553FreshwaterMNEYEVELIHEPSGAHMSFIMFSETKEDEIELAKEIWADISVVVLDYKEGDE
Ga0244775_10007617323300024346EstuarineMIEYKIELIHEPSGAYMNFALFTEEEQDEVTLAKEIWSDMSVVVLDSIKEED
Ga0244775_1002156483300024346EstuarineMNEYTVELIHEPSGAYMNFIVFSDVKQDEVALAKEIWSDMSVVVLDYVEGEE
Ga0244775_1007754653300024346EstuarineMNEYTVELIHEPSGAHMNFVMFSDTKEDEIELAREIWADMSVVVLDYVEGEE
Ga0244775_1042624933300024346EstuarineMHEYKIELIHEPSGAYMNFVMFSETKEDEVALAKEIWADMSVVVLDYVEGEE
Ga0244775_1079713133300024346EstuarineMNEYTVELIHEPSGAYMNFVMFSDVKQDEVALAKEIWADMSVVVLDYVEEQD
Ga0244776_1025254543300024348EstuarineMGNYTIELIHEPSGAHMNFVMFSETENNEVELAKEIWSDMSVVVLDYEEGEK
Ga0208797_1003316103300027186EstuarineMIEYKIELIHEPSGAYMNFALFTEEEQDEVTLAKEIWSDMSVVVLDS
Ga0208554_103640333300027212EstuarineHEPSGAHMNFVMFSETENNEVELAKEIWSDMSVVVLDYEEGEK
Ga0208557_102512613300027221EstuarineMNEYTVELIHEPSGAHMNFVMFSDTKEDEIELAKEIWAEMSVVVLDYIEEEE
Ga0208025_101990943300027225EstuarineGAHMNFVMFSDTKEDEIELAKEIWAEMSVVVLDYVEEED
Ga0208442_100933163300027229EstuarineMNEYTVELIHEPSGAHMNFVMFSDTKEDEIELAKEIWAEMSVVVLDYIEEED
Ga0208808_102700013300027238EstuarineYTVELIHEPSGAHMNFVMFSDTKEDEIELAKEIWAEMSVVVLDYVEEED
Ga0208444_101791213300027240EstuarineELIHEPSGAHMNFVMFSDTKEDEIELAKEIWAEMSVVVLDYVEEED
Ga0208805_102128113300027241EstuarineHMNFVMFSDTKEDEIELAKEIWAEMSVVVLDYVEEED
Ga0255103_105270933300027493FreshwaterPSGAHMNFVVFSDLKEDEVQLSKEIWADMSVVILDYVEGEE
Ga0209552_105817613300027563Freshwater LakeMIEYKIELIHELSGAYMNFSLFTEEEQDEVALAKEIWSDMSVVVLDSIKEED
Ga0208966_106157023300027586Freshwater LenticMNSYEIELIHEPSGAYMNFILFSELKEDDIDVAETIWADMSVVVLDYKEGDE
Ga0208966_112784413300027586Freshwater LenticMNSYEIELIHEPSGAYMNFILFSELKEDDIDVAETI
Ga0208133_101270943300027631EstuarineMNSYEIELIHEPSGAYMNFILFSELKEDDIDVAETIWADMSVIVLDYKEGDE
Ga0209443_106520013300027707Freshwater LakeYTYYLKDNMNSYEIELIHEPSGAYMNFILFSELKEDDIDVAETIWADMSVVVLDYKEGDE
Ga0209443_110180443300027707Freshwater LakeMNSYEIELIHEPSGAYMNFILFSELKEDDIDVAETIWAD
Ga0209599_1015828623300027710Deep SubsurfaceMSQYTVELIHEPSGAYMNFVMFSEIENDEVQLAKEIWSDMSVVVLDYVEGEE
Ga0209596_115878923300027754Freshwater LakeMNEYTVELIHEPSGAHMSFVMFSDVKQDEIELAKEIWAEMSVVVLDYVEEEE
Ga0209088_10016243103300027763Freshwater LakeMNEYEVELIHEPSGAHMSFIMFSETKEDEIELAKEIWADISVVVLDYKEGEE
Ga0209088_1032697123300027763Freshwater LakeMNKYEVEVIHEPSGAYMNFVMFSETNEDEIELAKEIWADMSVVILDYEEGVEE
Ga0209107_1001992163300027797Freshwater And SedimentMNKYEVEVIHEPSGAYMNFVMFSETNEDEIELAKEIWADMSVVILDYKEGVEE
Ga0209107_1003619123300027797Freshwater And SedimentMNQYEIELIHEPSGAYMNFILFSELKQDDIDVAETIWADMSVIVLDYKEGDE
Ga0209107_1004776213300027797Freshwater And SedimentMNSYEIELIHEPSGAYMNFILFSELKQDDIDVAETIWAD
Ga0209229_1015480833300027805Freshwater And SedimentMNEYKVELIHEPSGAYMNFVMFSETKEDEVALAKEIWADMSVVVLDYIEGEE
Ga0209354_1021943933300027808Freshwater LakeMNSYEIELIHEPSGAYMNFILFSELKEDDIDVAETIWADMSVI
Ga0209230_1012280853300027836Freshwater And SedimentMNSYEIELIHEPSGAYMNFILFSELKEDDIDVAETIWADMSVIVLDYK
Ga0209550_1007408463300027892Freshwater LakeMIEYKIELIHELSGAYMNFSLFTEEEQDEVTLAKEIWSDMSVVVLDSIKEED
Ga0209550_1033400423300027892Freshwater LakeMGNYTIELIHEPSGAHMNFVMFSETENNEVELAKEIWSDMSVVVLDYEEGEE
Ga0209550_1058444513300027892Freshwater LakeYYLKDNMNSYEIELIHEPSGAYMNFILFSELKEDDIDVAETIWADMSVIVLDYKEGDE
Ga0209298_10003749103300027973Freshwater LakeMNEYKIELIHEPSGAYMNFTLFSETKEDEVALAKEIWADMSVVVLDYIEGEE
Ga0247723_101309323300028025Deep Subsurface SedimentVNEYKIELIHEPSGAYMNFVMFSETKEDEVALAKEIWADMSVVVLDCIEEEE
Ga0247723_104165643300028025Deep Subsurface SedimentMNKYEVEVIHEPSGAHMNFVMFSETNEDEIELSKEIWADMSVVILDYEEGVEE
Ga0247722_10023556103300028027Deep Subsurface SedimentVNEYKIELIHEPSGAYMNFVMFSETKEDEVALSKEIWADMSVVVLDCIEEN
Ga0334992_0081458_1455_16133300033992FreshwaterMNQYEIELIHEPSGAYMNFILFSELEQDDIDVAETIWADMSVVVLDYKEGDE
Ga0334992_0275339_123_2933300033992FreshwaterMRKKMNKYEVEVIHEPSGAHMSFIMFSETNEDEIELAKEIWADMSVIVLDYVEGEE
Ga0334996_0514990_224_4063300033994FreshwaterMKQSNKYEVELVHETSGAHMSFIMYTDISNDEIALADEIWADISVVVLDYEEGKEYGSPN
Ga0335005_0372094_606_7643300034022FreshwaterMNQYEVELVHEPSGAHMSFIMFTETSSDEIALAEEIWADMSVVVLDYKEGDE
Ga0334995_0223703_1159_12873300034062FreshwaterMNQYEIELIHEPSGAYMNFILFSELEQDDIDVAETIWADMSVI
Ga0335019_0293116_221_3793300034066FreshwaterMNEYTVELIHEPSGAHMNFVVFSDLKEDEIQLSKEIWADMSVVVLDYVEGEE
Ga0335028_0184735_942_11003300034071FreshwaterMNSYEIELIHEPSGAYMNFILFSELKQDDIDVAESIWADMSVIVLDYKEGDE
Ga0335037_0716249_2_1453300034107FreshwaterMNQYEIELIHEPSGAYMNFILFSELEQDDIDVAETIWADMSVVVLDYK
Ga0335055_0093635_1031_12133300034110FreshwaterMKQSNKYEVELVHEPSGAHMSFITYTDISNDEIALADEIWADISVVVLDYEEGKEYGSPN
Ga0335055_0103524_1054_12123300034110FreshwaterMNEYTVELIHEPSGAHINFVMFSDVKQDEVALAKEIWADMSVVVLDYVEEEE

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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