NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F080077

Metagenome / Metatranscriptome Family F080077

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F080077
Family Type Metagenome / Metatranscriptome
Number of Sequences 115
Average Sequence Length 81 residues
Representative Sequence MAINSNQLQVAKIYPGNYTNVLRYWHEEKSVVYNNENGTSETLTNQPVGGPVGVVFRPGWIAQQAIGYVDLSYQALG
Number of Associated Samples 103
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 96.52 %
% of genes from short scaffolds (< 2000 bps) 85.22 %
Associated GOLD sequencing projects 99
AlphaFold2 3D model prediction Yes
3D model pTM-score0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (63.478 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(20.000 % of family members)
Environment Ontology (ENVO) Unclassified
(28.696 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(47.826 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 21.90%    Coil/Unstructured: 78.10%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.29
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 115 Family Scaffolds
PF04724Glyco_transf_17 1.74
PF03161LAGLIDADG_2 1.74
PF14528LAGLIDADG_3 0.87
PF00210Ferritin 0.87
PF13578Methyltransf_24 0.87



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms64.35 %
UnclassifiedrootN/A35.65 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2236876023|PC6_p0378608Not Available999Open in IMG/M
2236876023|PC6_p0452320All Organisms → cellular organisms → Bacteria999Open in IMG/M
3300001472|JGI24004J15324_10013913All Organisms → cellular organisms → Bacteria2841Open in IMG/M
3300001748|JGI11772J19994_1049184Not Available502Open in IMG/M
3300002447|JGI24768J34885_10271192All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300002835|B570J40625_100826915All Organisms → cellular organisms → Bacteria810Open in IMG/M
3300003277|JGI25908J49247_10115293Not Available639Open in IMG/M
3300004460|Ga0066222_1255853All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300004481|Ga0069718_13756077All Organisms → cellular organisms → Bacteria853Open in IMG/M
3300005239|Ga0073579_1188925All Organisms → cellular organisms → Bacteria46653Open in IMG/M
3300005239|Ga0073579_1190826All Organisms → cellular organisms → Bacteria74410Open in IMG/M
3300005582|Ga0049080_10086427All Organisms → cellular organisms → Bacteria1071Open in IMG/M
3300005613|Ga0074649_1072822All Organisms → cellular organisms → Bacteria1354Open in IMG/M
3300006026|Ga0075478_10032726All Organisms → cellular organisms → Bacteria1731Open in IMG/M
3300006402|Ga0075511_1617605Not Available944Open in IMG/M
3300006639|Ga0079301_1065033Not Available1158Open in IMG/M
3300006639|Ga0079301_1072713Not Available1081Open in IMG/M
3300006790|Ga0098074_1118970All Organisms → cellular organisms → Bacteria690Open in IMG/M
3300006868|Ga0075481_10244939All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300006869|Ga0075477_10405994Not Available529Open in IMG/M
3300006919|Ga0070746_10171912All Organisms → cellular organisms → Bacteria1045Open in IMG/M
3300007276|Ga0070747_1291271All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300007539|Ga0099849_1087444All Organisms → cellular organisms → Bacteria1254Open in IMG/M
3300007539|Ga0099849_1185882All Organisms → cellular organisms → Bacteria788Open in IMG/M
3300007540|Ga0099847_1255697All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300007606|Ga0102923_1089912All Organisms → cellular organisms → Bacteria965Open in IMG/M
3300007634|Ga0102901_1193227All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300007653|Ga0102868_1118436All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300007960|Ga0099850_1077243Not Available1392Open in IMG/M
3300009160|Ga0114981_10536791Not Available624Open in IMG/M
3300009509|Ga0123573_10621453All Organisms → cellular organisms → Bacteria1020Open in IMG/M
3300010354|Ga0129333_10501789All Organisms → cellular organisms → Bacteria1063Open in IMG/M
3300010368|Ga0129324_10245363Not Available715Open in IMG/M
3300010370|Ga0129336_10216321All Organisms → cellular organisms → Bacteria1086Open in IMG/M
3300010370|Ga0129336_10358557Not Available801Open in IMG/M
3300010413|Ga0136851_10106040All Organisms → cellular organisms → Bacteria2969Open in IMG/M
3300012525|Ga0129353_1899650All Organisms → cellular organisms → Bacteria1132Open in IMG/M
3300012528|Ga0129352_10801911All Organisms → cellular organisms → Bacteria1052Open in IMG/M
3300012765|Ga0138274_1152491Not Available621Open in IMG/M
3300012774|Ga0138283_1243401Not Available1294Open in IMG/M
3300013098|Ga0164320_10266384All Organisms → cellular organisms → Bacteria814Open in IMG/M
3300017697|Ga0180120_10065675All Organisms → cellular organisms → Bacteria1614Open in IMG/M
3300017716|Ga0181350_1064153All Organisms → cellular organisms → Bacteria953Open in IMG/M
3300017754|Ga0181344_1157847All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300017774|Ga0181358_1225341Not Available601Open in IMG/M
3300017780|Ga0181346_1026822All Organisms → cellular organisms → Bacteria2402Open in IMG/M
3300019201|Ga0180032_1046630All Organisms → cellular organisms → Bacteria586Open in IMG/M
3300019745|Ga0194002_1041176Not Available700Open in IMG/M
3300019784|Ga0181359_1061533All Organisms → cellular organisms → Bacteria1437Open in IMG/M
3300020184|Ga0181573_10125343All Organisms → cellular organisms → Bacteria1505Open in IMG/M
3300020189|Ga0181578_10177284All Organisms → cellular organisms → Bacteria1087Open in IMG/M
3300020200|Ga0194121_10093684All Organisms → cellular organisms → Bacteria1968Open in IMG/M
3300020316|Ga0211487_1094090All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300020400|Ga0211636_10290306All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300020451|Ga0211473_10014827All Organisms → cellular organisms → Bacteria3778Open in IMG/M
3300020494|Ga0208326_100002All Organisms → cellular organisms → Bacteria38792Open in IMG/M
3300021368|Ga0213860_10381587All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300021368|Ga0213860_10526042All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300021958|Ga0222718_10443699All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300021963|Ga0222712_10787860All Organisms → Viruses → unclassified bacterial viruses → Synechococcus phage S-EIVl525Open in IMG/M
3300022057|Ga0212025_1094519Not Available512Open in IMG/M
3300022167|Ga0212020_1049096Not Available716Open in IMG/M
3300022200|Ga0196901_1242364All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300022218|Ga0224502_10331024All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300022407|Ga0181351_1061322Not Available1545Open in IMG/M
3300023084|Ga0255778_10112739Not Available1507Open in IMG/M
3300023178|Ga0255759_10523279Not Available691Open in IMG/M
3300023180|Ga0255768_10263928Not Available989Open in IMG/M
3300023180|Ga0255768_10473259All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300024262|Ga0210003_1107330Not Available1258Open in IMG/M
3300025057|Ga0208018_120508Not Available779Open in IMG/M
3300025543|Ga0208303_1097089All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300025630|Ga0208004_1003843All Organisms → cellular organisms → Bacteria5489Open in IMG/M
3300025630|Ga0208004_1055290All Organisms → cellular organisms → Bacteria1054Open in IMG/M
3300025655|Ga0208795_1012577All Organisms → cellular organisms → Bacteria2938Open in IMG/M
3300025674|Ga0208162_1009918All Organisms → cellular organisms → Bacteria4059Open in IMG/M
3300025751|Ga0208150_1233454All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300025889|Ga0208644_1178545Not Available944Open in IMG/M
3300027218|Ga0208165_1002983All Organisms → cellular organisms → Bacteria2538Open in IMG/M
3300027256|Ga0208932_1027321All Organisms → cellular organisms → Bacteria1028Open in IMG/M
3300027608|Ga0208974_1083924All Organisms → cellular organisms → Bacteria868Open in IMG/M
3300027707|Ga0209443_1250056All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300027708|Ga0209188_1031145Not Available2548Open in IMG/M
(restricted) 3300027730|Ga0247833_1325884All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300027732|Ga0209442_1057139All Organisms → cellular organisms → Bacteria1664Open in IMG/M
3300027785|Ga0209246_10404445Not Available513Open in IMG/M
3300027808|Ga0209354_10107686All Organisms → cellular organisms → Bacteria1138Open in IMG/M
3300027808|Ga0209354_10251887All Organisms → cellular organisms → Bacteria709Open in IMG/M
3300027851|Ga0209066_10215824Not Available1133Open in IMG/M
3300027888|Ga0209635_11209563All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300027899|Ga0209668_11009211All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300029306|Ga0135212_1026955Not Available605Open in IMG/M
3300029345|Ga0135210_1031952Not Available577Open in IMG/M
3300029930|Ga0119944_1046034Not Available531Open in IMG/M
3300031565|Ga0307379_10094391All Organisms → cellular organisms → Bacteria3264Open in IMG/M
3300031566|Ga0307378_10359692Not Available1351Open in IMG/M
3300031707|Ga0315291_11218510Not Available614Open in IMG/M
3300031787|Ga0315900_10742138Not Available687Open in IMG/M
3300031857|Ga0315909_10288251All Organisms → cellular organisms → Bacteria1235Open in IMG/M
3300031951|Ga0315904_10399961Not Available1245Open in IMG/M
3300031951|Ga0315904_11198190All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300032053|Ga0315284_10456020Not Available1562Open in IMG/M
3300032092|Ga0315905_10093849Not Available3031Open in IMG/M
3300032092|Ga0315905_11513647Not Available526Open in IMG/M
3300032163|Ga0315281_11627058All Organisms → cellular organisms → Bacteria629Open in IMG/M
3300034012|Ga0334986_0240520Not Available990Open in IMG/M
3300034021|Ga0335004_0339909All Organisms → cellular organisms → Bacteria872Open in IMG/M
3300034061|Ga0334987_0011606All Organisms → cellular organisms → Bacteria8174Open in IMG/M
3300034061|Ga0334987_0118384All Organisms → cellular organisms → Bacteria2000Open in IMG/M
3300034071|Ga0335028_0470788Not Available701Open in IMG/M
3300034072|Ga0310127_100080Not Available1251Open in IMG/M
3300034073|Ga0310130_0008575All Organisms → cellular organisms → Bacteria3712Open in IMG/M
3300034116|Ga0335068_0387255Not Available672Open in IMG/M
3300034118|Ga0335053_0787846All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300034418|Ga0348337_159653All Organisms → cellular organisms → Bacteria623Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous20.00%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake10.43%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater6.96%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater5.22%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine5.22%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh5.22%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient4.35%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake3.48%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment2.61%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine2.61%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine2.61%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment1.74%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater1.74%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic1.74%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine1.74%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater1.74%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water1.74%
Marine HarborEnvironmental → Aquatic → Marine → Harbor → Unclassified → Marine Harbor1.74%
Saline Water Concentrator PondEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water Concentrator Pond1.74%
Mangrove SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment1.74%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil1.74%
Deep SubsurfaceEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface1.74%
Fracking WaterEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water1.74%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment0.87%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment0.87%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.87%
AquaticEnvironmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic0.87%
WatershedsEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Watersheds0.87%
Marine SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment0.87%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface0.87%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.87%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment0.87%
SedimentEnvironmental → Aquatic → Marine → Sediment → Unclassified → Sediment0.87%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment0.87%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment0.87%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2236876023Saline water concentrator pond microbial communities from Bras del Port saltern, Spain - PC6EnvironmentalOpen in IMG/M
3300001472Marine viral communities from the Pacific Ocean - LP-32EnvironmentalOpen in IMG/M
3300001748Saline surface water microbial communities from Etoliko Lagoon, Greece - surface water (0 m)EnvironmentalOpen in IMG/M
3300002447Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion MetagenomeEnvironmentalOpen in IMG/M
3300002835Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)EnvironmentalOpen in IMG/M
3300003277Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SDEnvironmentalOpen in IMG/M
3300004460Marine viral communities from Newfoundland, Canada BC-1EnvironmentalOpen in IMG/M
3300004481Combined Assembly of Gp0112041, Gp0112042, Gp0112043EnvironmentalOpen in IMG/M
3300005239Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of MaineEnvironmentalOpen in IMG/M
3300005582Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRFEnvironmentalOpen in IMG/M
3300005613Saline sediment microbial communities from Etoliko Lagoon, Greece - sedimentEnvironmentalOpen in IMG/M
3300006026Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006402Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006639Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_11EnvironmentalOpen in IMG/M
3300006790Marine viral communities from the Gulf of Mexico - 32_GoM_OMZ_CsCl metaGEnvironmentalOpen in IMG/M
3300006868Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006869Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007276Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31EnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007606Estuarine microbial communities from the Columbia River estuary - metaG 1569-02EnvironmentalOpen in IMG/M
3300007634Estuarine microbial communities from the Columbia River estuary - metaG 1555A-02EnvironmentalOpen in IMG/M
3300007653Estuarine microbial communities from the Columbia River estuary - metaG 1546C-3EnvironmentalOpen in IMG/M
3300007960Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaGEnvironmentalOpen in IMG/M
3300009160Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaGEnvironmentalOpen in IMG/M
3300009509Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_11EnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010370Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNAEnvironmentalOpen in IMG/M
3300010413Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_9EnvironmentalOpen in IMG/M
3300012525Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012528Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012765Freshwater microbial communities from Lake Croche, Canada - C_131016_E_mt (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012774Freshwater microbial communities from Lake Simoncouche, Canada - S_130109_E_mt (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300013098Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay11, Core 4567-28, 0-3 cmEnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017716Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.DEnvironmentalOpen in IMG/M
3300017754Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.DEnvironmentalOpen in IMG/M
3300017774Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017780Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300019201Estuarine microbial communities from the Columbia River estuary - R6.10AS metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019745Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLT_8-9_MGEnvironmentalOpen in IMG/M
3300019784Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300020184Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101409BT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020189Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071401CT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020200Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015020 Mahale Deep Cast 50mEnvironmentalOpen in IMG/M
3300020316Marine microbial communities from Tara Oceans - TARA_A100001234 (ERX555946-ERR599134)EnvironmentalOpen in IMG/M
3300020400Marine microbial communities from Tara Oceans - TARA_B100001115 (ERX555947-ERR598992)EnvironmentalOpen in IMG/M
3300020451Marine microbial communities from Tara Oceans - TARA_B100001778 (ERX555927-ERR598996)EnvironmentalOpen in IMG/M
3300020494Freshwater microbial communities from Lake Mendota, WI - 25SEP2008 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300021368Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550EnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021963Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657DEnvironmentalOpen in IMG/M
3300022057Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v2)EnvironmentalOpen in IMG/M
3300022167Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v2)EnvironmentalOpen in IMG/M
3300022200Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022218Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_13EnvironmentalOpen in IMG/M
3300022407Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300023084Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaGEnvironmentalOpen in IMG/M
3300023178Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaGEnvironmentalOpen in IMG/M
3300023180Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaGEnvironmentalOpen in IMG/M
3300024262Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025057Marine viral communities from the Gulf of Mexico - 31_GoM_OMZ_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025543Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025630Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025655Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025674Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025751Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300027218Estuarine microbial communities from the Columbia River estuary - metaG 1546B-3 (SPAdes)EnvironmentalOpen in IMG/M
3300027256Estuarine microbial communities from the Columbia River estuary - metaG 1560A-3 (SPAdes)EnvironmentalOpen in IMG/M
3300027608Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027707Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD (SPAdes)EnvironmentalOpen in IMG/M
3300027708Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027730 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_8mEnvironmentalOpen in IMG/M
3300027732Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (SPAdes)EnvironmentalOpen in IMG/M
3300027785Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027808Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)EnvironmentalOpen in IMG/M
3300027851Freshwater microbial communities in response to fracking from Pennsylvania, USA - Allegheny Zone_MetaG_DW_15 (SPAdes)EnvironmentalOpen in IMG/M
3300027888Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-30_32 (SPAdes)EnvironmentalOpen in IMG/M
3300027899Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)EnvironmentalOpen in IMG/M
3300029306Marine harbor viral communities from the Indian Ocean - SCH3EnvironmentalOpen in IMG/M
3300029345Marine harbor viral communities from the Indian Ocean - SCH1EnvironmentalOpen in IMG/M
3300029930Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727EnvironmentalOpen in IMG/M
3300031565Soil microbial communities from Risofladan, Vaasa, Finland - UN-2EnvironmentalOpen in IMG/M
3300031566Soil microbial communities from Risofladan, Vaasa, Finland - UN-1EnvironmentalOpen in IMG/M
3300031707Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20EnvironmentalOpen in IMG/M
3300031787Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300031951Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120EnvironmentalOpen in IMG/M
3300032053Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16EnvironmentalOpen in IMG/M
3300032092Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121EnvironmentalOpen in IMG/M
3300032163Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0EnvironmentalOpen in IMG/M
3300034012Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027EnvironmentalOpen in IMG/M
3300034021Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Oct2014-rr0057EnvironmentalOpen in IMG/M
3300034061Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028EnvironmentalOpen in IMG/M
3300034071Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Oct2008D10-rr0110EnvironmentalOpen in IMG/M
3300034072Fracking water microbial communities from deep shales in Oklahoma, United States - MC-3-AEnvironmentalOpen in IMG/M
3300034073Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XLEnvironmentalOpen in IMG/M
3300034116Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-CONTROL-GENDONOREnvironmentalOpen in IMG/M
3300034118Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Aug2017-rr0165EnvironmentalOpen in IMG/M
3300034418Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
PC6_037860812236876023Saline Water Concentrator PondMAINSNQLHVAKIYPGNYTNVLRYWHEEKTMQFENANGVQTSYPNQPVGGPVGVVFRPGWMPNRQSLQSLL
PC6_045232012236876023Saline Water Concentrator PondMAINSNQLHVAKIYPGNYTNVLRYWHEEKTMQFENANGVQTSYTNQPVGGPVGVVFRPGWIAQQAIGYVDLSYQALGTNNQLATTPSSNV
JGI24004J15324_1001391343300001472MarineVINAKQLHVAKIYPGNYTNVLRYWHEVRSIASQNANGVDTTMTGQPVGGPVGVVFQPGWIAQQAVGYVDMSYQALGTNN
JGI11772J19994_104918413300001748Saline Water And SedimentMAINSNQLHVAKIYPGNYTNVLRYWHEEKSVQYENANGVSTTLTNQPIGGPVGVVFQPGWIAQQAVG
JGI24768J34885_1027119223300002447Freshwater And SedimentMATNPNQLQVSKIYPGNYTNVLRYWHDEKTFQFRNANDTETTYTNQPIGGPVGVVFTPGWVAQQAIGYVDLSFQALGTTSQLEYYTQAYSS
B570J40625_10082691523300002835FreshwaterMATNPAQIAVARIYPGNYTNVLRYWHSESSFSFLNENGTNETYSNQPVGGPVGVVFRPGWIAQQAVGYVDLSYQASSSTNQLE
JGI25908J49247_1011529313300003277Freshwater LakeMTTNANQIAVSKIFPGNYTNVLRYWHEEKTFQFRNANDTETTFSNQPVGGPVGVVFTPGWIAQQAIGYVD
Ga0066222_125585323300004460MarineMTTNANQIQVSKIYPGNYTNVLRYWHDEKSFQFRNQNDTETTYSNQPIGGPVGGGFQPGRVAPQAIGYADLSFQALGTNQIDY
Ga0069718_1375607723300004481SedimentMAINPKQISVTKIYPGNYTNVLRYWHEPKSVDFLNANGTAQTLANQPVGGPVGVIFRPGWIAQQAVGYVDLSFQALGSVNQLEYYAT
Ga0073579_1188925303300005239MarineMSINPNQVHVSKIYPGNYTNVLRYWHEEKTMQFENANGVQTSYTNQPVGGPVGVVFQPGWIAQQAVGYLDLS
Ga0073579_1190826593300005239MarineMAINPNQISVAKIYPGNYANVLRYWHEEKTMQFENANGVSTSYTNQPVGGPVGVIFRPGWVAQQAIGYVDLSYQALGSVTSWSTTPKPMALVLT
Ga0049080_1008642723300005582Freshwater LenticMATNPNQLQVSKIYPGNYTNVLRYWHDEKTFQFRNANDTETTYTNQPIGGPVGVVFTPGWVAQQAIGYVDLSFQALGT
Ga0074649_107282223300005613Saline Water And SedimentMTINPSQIQVSKIYPGNYTNVLRYWHSTSSFSFLNANNTNPTYSNQPVGGPVGVVFRPGWIAQQAIGYVDLSYQPGGTTN
Ga0075478_1003272613300006026AqueousMAINSNQLHVAKIYPGNYTNVLRYWHEEKTMQFENANGVQTSYTNQPVGGPVGVVFRPGWIAQQAVGYVDLSFQALGSTNQLSYYTRP
Ga0075511_161760523300006402AqueousMAINSNQLQVAKIYPGNYTNVLRYWHEEKSVVYNNENGTSETLTGQPVGGPVGVVFRPGWIAQQAIGYV
Ga0079301_106503313300006639Deep SubsurfaceMAIATNQLSVAKIYPGNYTNVLRYWHEEKTVQYNNANGVSTNLTNQPVGGPVGVVFRPGWIAQQAVGYVDLSYQAL
Ga0079301_107271323300006639Deep SubsurfaceMTVNPAQISVAKIYPGNYTNVLRYWHEEKSVVYLNANGTSETLTSQPIGGPVGVIFQPGWIAQQAIGYVDLSY
Ga0098074_111897023300006790MarineMAINSNQLQVAKIYPGNYTNVLRYWHEEKSIPNISENGTAETLTNQPVGGPVGVVFRPGWIAQQAIGYVDLSYQANGSV
Ga0075481_1024493923300006868AqueousMAINPNQLQVAKIYPGNYTNVLRYWHEEKSVVFNNENGTSETLTGQPVGGPVGVVFRPGWIAQQAIGYVDLSYQANGSVNQLEYYTQPY
Ga0075477_1040599423300006869AqueousMAINSNQLHVAKIYPGNYTNVLRYWHEEKTVQFENANGVQTSYTNQPVGGPVGVVFRPGWIAQQAVGYVDLSY
Ga0070746_1017191223300006919AqueousMAINSNQLQVAKIYPGNYTNVLRYWHEEKSVVFNNENGTSETLTGQPVGGPVGVVFRPGWIAQQAIGYVDLSYQANGSV
Ga0070747_129127113300007276AqueousMAINSNQLHVAKIYPGNYTNVLRYWHEEKTMQFENANGVQTSYTNQPVGGPVGVVFRPGWIAQQAIGYVDLSYQALGTNNQL
Ga0099849_108744413300007539AqueousMAINSNQLHVAKIYPGNYTNVLRYWHEEKTVQYNNANGVSTNLTNQPIGGPVGVVFRPGWIAQQAVGYVDLSYQALGTNNQLSYYTRPY
Ga0099849_118588223300007539AqueousMAINSNQLHVAKIYPGNYTNVLRYWHEEKTVQYDNANGVSTNLTNQPIGGPVGVVFRPGWIAQQAVGYVDLSYQALGTNNQLSYYTRPY
Ga0099847_125569713300007540AqueousMAINPNQLSVAKIYPGNYTNVLRYWHEEKSVTYLNENGTSETLANQPVGGPVGVVFRPGWIAQQAVGYVDLSYQAAGTTNQLDYYAQ
Ga0102923_108991213300007606EstuarineMAINPNQISVAKIYPGNYTNVLRYWHEEKSVVYNNENGTSETLVDQPVGGPVGVIFRPGWIAQQAVGYVDLSYQALGSVNQLEYYTKPYG
Ga0102901_119322723300007634EstuarineMAINPNQISVAKIYPGNYTNVLRYWHEEKSVVYNNENGTSETLVDQPVGGPVGVIFRPGWIAQQAVGYVDLSYQALGSVNQLEYYTKPYGSGLNGDNVQTRTV
Ga0102868_111843623300007653EstuarineMAINPNQISVAKIYPGNYTNVLRYWHEEKSVVYNNENGTSETLVDQPVGGPVGVIFRPGWIAQQAVGYVDLSYQALGSVNQLEYYTKPYGSGLNGDNV
Ga0099850_107724313300007960AqueousMAINSNQLQVAKIYPGNYTNVLRYWHEEKSVVYNNENGTSETLTNQPVGGPVGVVFRPGWIAQQAIGYVDLS
Ga0114981_1053679123300009160Freshwater LakeMAIATNQLSVAKIYPGNYTNVLRYWYEEKTVQYNNANGVSTNLTNQPVGGPVGVVFRPGWIAQQ
Ga0123573_1062145313300009509Mangrove SedimentMAINPNQLSVAKIYPGNYTNVLRYWHEEKSVTYLNENGTSETLANQPVGGPVGVVFRPGWIAQQAVGYVDLSYQAAGTTNQLDYYAQA
Ga0129333_1050178913300010354Freshwater To Marine Saline GradientMATNPNQLQVSKIYPGNYTNVLRYWHDEKTFQFRNANDTETTYTNQPIGGPVGVVFTPGWVAQQAIGYVDLSFQALGTTSQLEYYTQAYSSGLN
Ga0129324_1024536323300010368Freshwater To Marine Saline GradientMAINSNQLQVAKIFPGNYTNVLRYWHEEKSIPNISENGTAETLTNQPVGGPVGVVFRPGWIAQQAIGYVDLSY
Ga0129336_1021632123300010370Freshwater To Marine Saline GradientMAINSNQISVSKIYPGNYTNVLRYWNEEKSVTYLNENGTSETLTNQPVGGPVGVIFRPGWIAQQAIGYVDLSYQAAGTTNQ
Ga0129336_1035855713300010370Freshwater To Marine Saline GradientMAINPNALSVAKIYPGNYTNVLRYWHEEKSVDFQNPNGTNTTYTNQPVGGPVGVVFRPGWIAQQAVGYVD
Ga0136851_1010604013300010413Mangrove SedimentMAINSNQLHVAKIYPGNYTNVLRYWHEEKTMQFENANGVQTSYTNQPVGGPVGVVFRPGWIAQQAVGYVDLS
Ga0129353_189965023300012525AqueousMAINSNQLHVAKIYPGNYTNVLRYWHEEKTMQFENANGVQTSYTNQPVGGPVGVVFRPGWIAQQAVGYVDLSFQALGSTNQ
Ga0129352_1080191113300012528AqueousMAINSNQLHVAKIYPGNYTNVLRYWHEEKTVQYDNANGVSTNLTNQPIGGPVGVVFRPGWIAQQAVGYVDLSYQALGTNNQ
Ga0138274_115249113300012765Freshwater LakeMTTNANQIQVSKIYPGNYTNVLRYWHDEKSFQFRNANETETTYSNQPIGGPVGVVFQPGWIAQQAIGYVDLSFQAL
Ga0138283_124340113300012774Freshwater LakeMAIATNQLSVSKIYPGNYTNVLRYWHEEKTVQYNNANGVSTNLTNQPVGGPVGVVFRPGWIAQQAVGYVDL
Ga0164320_1026638423300013098Marine SedimentMAINSNQLHVAKIYPGNYTNVLRYWHETKTIQYQNANGVDTNPPGQPVGGPVGVVFQPGWTAQQAVGYVDLSYQALGTNNQLSYYT
Ga0180120_1006567513300017697Freshwater To Marine Saline GradientMAINSNQLHVAKIYPGNYTNVLRYWHEEKTMQFENANGVQTSYTNQPVGGPVGVVFRPGWIAQQAVGYVDLSYQALGTSNQLSYYTQPYGSGGAS
Ga0181350_106415313300017716Freshwater LakeMAIATNQLSVSKIYPGNYTNVLRFWHEEKTVQYNDANGVSTNLTNQPVGGPVGVVFRPGWIAQQAIGYVDLSYQALGTNNQLEYYTLPYGSG
Ga0181344_115784723300017754Freshwater LakeMTVNPNQISVAKIYPGNYTNVLRYWHEEKSVVYLNENGTSETLTSQPIGGPVGVIFQPGWIAEQAIGYVDLFSQALGSVNQLEYYTQHSGS
Ga0181358_122534113300017774Freshwater LakeMATNPNQLQVSKIYPGNYTNVLRYWHDEKTFQFRNANDTETTYTNQPIGGPVGVVFTPGWVAQQAIGY
Ga0181346_102682213300017780Freshwater LakeMAINPLQLQVSKIYPGNYTNVLRYWHKPTTVVYNNANETSTTLTNQPVGGPVGVVYKPGWIAQQAIGYVDLSYQAGGTTNQLEYYTNPYGSGQNS
Ga0180032_104663023300019201EstuarineMAINPNQISVAKIYPGNYTNVLRYWHEEKSVVYNNENGTSETLTNQPIGGPVGVVFRPGWIAQQAIGYVDLSYQALGSVN
Ga0194002_104117613300019745SedimentMAINSNQLHVAKIYPGNYTNVLRYWHEEKTMQFENANGVQTSYTNQPVGGPVGVVFRPGWIAQQAV
Ga0181359_106153313300019784Freshwater LakeMAINPLQLQVSKIYPGNYTNVLRYWHKPTSVVYNNANETSTTLTNQPVGGPVGVVFKPGWIAQQAIGYVDLSYQAGGTTNQLD
Ga0181573_1012534313300020184Salt MarshMAINPNALSVAKIYPGNYTNVLRYWHEEKSVDTLNANGRPVTKTGQPVGGPVGVVFRPGWIAQQAVGYVDLSYQALGTSNQLSYYTKPYGSGQNSA
Ga0181578_1017728423300020189Salt MarshMAINSNQLHVAKIYPGNYTNVLRYWHEEKTMQFENANGVQTSYTNQPVGGPVGVVFRPGWIAQQAVGYVDLSFQALGSTNQLSYYTRPYGSGQNSA
Ga0194121_1009368413300020200Freshwater LakeMAINSNQISVSKIYPGNYTNVLRFWNEEKSVTYLNENGTSETLTNQPVGGPVGVVFRPGWIAQQAIGYVDLSYQAAGTTNQL
Ga0211487_109409023300020316MarineMAINSNQLHVAKIYPGNYTNVLRYWHEEKSVAFQNANGVDTTYTNQPVGGPVGVVFQPGWIAQQAVGYVDLSYQALGTNNQLSYYTKPYG
Ga0211636_1029030623300020400MarineMGYSNPADLAAINPRQLSVTKIYPGNYSNVLRYWHEVSSFSFQDPNGIDRTYENQPIGGPVGVVFKPGVIAQQAIGYVDLSFQDLGSLNQMSYYMK
Ga0211473_1001482783300020451MarineMGYSNPADLAMINPRQLSVTKIYPGNYSNVLRYWHEVSSFSFQDPNGIDQTYSNQPIGGPVGVVFKPGVIAQQAIGYVDLSFQDNGSLNQMSYYMRPY
Ga0208326_10000213300020494FreshwaterMAINPNQISVAKIYPGNYTNVLRYWHEEKSVVYNNENGTSETLVDQPVGGPVGVIFRPGWIAQQAVGYVDLSYQALGSVNQLEYYTT
Ga0213860_1038158713300021368SeawaterMAINANQIAVTKIYPGNYTNVLKYWHETKSVDFNNENGYAETLTNQPIGGPVGVVFRPGWIAQQAVGYVDLSYQALGSVNQLEYYTTPYASGGASN
Ga0213860_1052604213300021368SeawaterMAINPNQLHVAKIYPGNYTNVLRYWHEEKTMQFENANGVQTSYTNQPVGGPVGVVFRPGWIAQQAVGYVDLSYQALGTNNQLSYYTQPYGSG
Ga0222718_1044369913300021958Estuarine WaterMAINSNQLHVAKIYPGNYTNVLRYWHEEKTMQFENANGVQTSYTNQPVGGPVGVVFRPGWIAQQAVGYVDMSFQALGSTNQLSYYTRPYGSG
Ga0222712_1078786023300021963Estuarine WaterMATNPLQLAVAKIYPGNYVNVLRYWHSESSFSFQNENGTNETYSNQPVGGPVGVVYRPGWVAQQAIGYVDLSYQASS
Ga0212025_109451913300022057AqueousMAINSNQLQVAKIYPGNYTNVLRYWHEEKSIPNISENGTAETLTNQPVGGPVGVVFRPGWIAQQAIGYVL
Ga0212020_104909613300022167AqueousMAINSNQLHVAKIYPGNYTNVLRYWHEEKTMQFENANGVQTSYTNQPVGGPVGVVFRPGWIAQQAIGYVDLT
Ga0196901_124236413300022200AqueousMAINSNQLHVAKIYPGNYTNVLRYWHEEKTMQFENANGVQTSYTNQPVGGPVGVVFRPGWIAQQAVGYVDMSFQALGSTNQLSYYTRPYGSGQN
Ga0224502_1033102423300022218SedimentMAINSNQLHVAKIYPGNYTNVLRYWHEEKSVTYLNENGTSETLANQPVGGPVGVVFRPGWIAQQAVGYVDLSYQAAGTTNQLDYYAQAYSSGLNGAN
Ga0181351_106132223300022407Freshwater LakeMAINPAQLSIAKIYPGNYTNVLRYWHETKTVTYLNENGTSETLTNQPVGGPVGVVLRPGWIAQQAIGYVDLS
Ga0255778_1011273913300023084Salt MarshMAINSNQLHVAKIYPGNYTNVLRYWHEEKTMQFENANGVQTSYTNQPVGGPVGVVFRPGWIAQQAVGYVDL
Ga0255759_1052327913300023178Salt MarshMAINPNALSVAKIYPGNYTNVLRYWHEEKSVDTLNANGRPVTKTGQPVGGPVGVVFRPGWIAQQAVGYVDLSY
Ga0255768_1026392813300023180Salt MarshMAINSNQLHVAKIYPGNYTNVLRYWHEEKTMQFENANGVQTSYTNQPVGGPVGVVFRPGWIAQQAVGYVD
Ga0255768_1047325913300023180Salt MarshMAINANQLHVAKIYPGNYTNVLRYWHEEKSVAYQNANGVDTTLTNQPVGGPVGVVFQPGWIAQQAVGYVDLSYQALGT
Ga0210003_110733013300024262Deep SubsurfaceMAINSNQLQVAKIYPGNYTNVLRYWHEEKSVVFNNENGTSETLTGQPVGGPVGVVFRPGWIAQQAIGYVDLSY
Ga0208018_12050823300025057MarineMAINANQIAVTKIYPGNYTNVLKYWHETKSVDFNNENGYAETLTNQPIGGPVGVVFRPGWIAQQAVGYVDLSYQAL
Ga0208303_109708923300025543AqueousMAINSNQLHVAKIYPGNYTNVLRYWHEEKTMQFENANGVQTSYTNQPVGGPVGVVFRPGWIAQQAIGYVDLSYQALGTNNQLAYYTRPYGSGQ
Ga0208004_100384313300025630AqueousMAINPNQLSVAKIYPGNYTNVLRYWHEEKSVTYLNENGTSETLANQPVGGPVGVVFRPGWIAQQAVGYVDLSYQAAGTTNQ
Ga0208004_105529013300025630AqueousMAINPNQLAVSKIYPGNYTNVLRYWHEPKSVTYLDANGNTSTLANQPVGGPVGVIFRPGWIAQQAVGYVDLSY
Ga0208795_101257753300025655AqueousMAINPNALSVAKIYPGNYTNVLRYWHEEKSVDFKNANGTNTTYTNQPVGGPVGVVFRPGWIAQQAVGYVDLSYQALG
Ga0208162_100991873300025674AqueousMAINSNQLQVAKIYPGNYTNVLRYWHEEKSVVYNNENGTSETLTNQPVGGPVGVVFRPGWIAQQAIGYVDLSYQALG
Ga0208150_123345413300025751AqueousMAINANQLHVAKIYPGNYTNVLRYWHEEKSVAYQNANGVDTTLTNQPVGGPVGVVFQPGWIAQQAVGYVDLSYQALGTTNQLSYYTKA
Ga0208644_117854523300025889AqueousMAINPNALSVAKIYPGNYTNVLRYWHEEKSVDFQNPNGTNTTYTNQPVGGPVGVVFRPGWIAQQAVGYVDLSYQALG
Ga0208165_100298313300027218EstuarineMAINPNQISVAKIYPGNYTNVLRYWHEEKSVVYNNENGTSETLVDQPVGGPVGVIFRPGWIAQQAVGYVDLSYQALGSVNQLEYYTKPYGS
Ga0208932_102732123300027256EstuarineMAINPNQISVAKIYPGNYTNVLRYWHEEKSVVYNNENGTSETLVDQPVGGPVGVIFRPGWIAQQAVGYVDLSYQALGSVNQLEYYTKPYGSGLN
Ga0208974_108392423300027608Freshwater LenticMTVNPAQISVAKIYPGNYTNVLRYWHEEKSVVYLNENGTSQTLTSQPIGGPVGVIFQPGWIAQQAIGYVDLSYQALGSVNQLEYYAQP
Ga0209443_125005623300027707Freshwater LakeMTTNANQIAVSKIFPGNYTNVLRYWHEEKTFQFRNANDTETTFSNQPVGGPVGVVFTPGWIAQQAIGYVDLSYQALGTTSQLEYYTQAYSSGLNGANV
Ga0209188_103114533300027708Freshwater LakeMTTNANQIQVSKIYPGNYTNVLRYWHDEKSFQFRNANETETTYSNQPIGGPVGVVFQPGWIAQQAIGYVDLSFQALGT
(restricted) Ga0247833_132588423300027730FreshwaterMAINPLQIQVSKIYPGNYTNVLRYWHKPTSVVYNNANETSTTLTNQPVGGPVGVVFKPGWVAQQAIGYVDLSYQAGGTTN
Ga0209442_105713933300027732Freshwater LakeMAIATNQLSVSKIYPGNYTNVLRFWHEEKTVQYNDANGVSTNLTNQPVGGPVGVVFRPGWIAQQAIGYVDLSYQALGTNNQLEYYTLPYGS
Ga0209246_1040444523300027785Freshwater LakeMAINPAQLSIAKIYPGNYTNVLRYWHETKTVTYLNENGTSETLTNQPVGGPVGVVLRPGWIAQQAIGYVDLSY
Ga0209354_1010768613300027808Freshwater LakeMAIATNQLSVSKIYPGNYTNVLRFWHEEKTVQYNDANGVSTNLTNQPVGGPVGVVFRPGWIAQQAIGYVDLSYQALGTNNQLEYYTLPYGSGSNSA
Ga0209354_1025188723300027808Freshwater LakeMATNPNQLQVSKIYPGNYTNVLRYWHDEKTFQFRNANDTETTYTNQPIGGPVGVVFTPGWVAQQAIGYVDLSFQALGTTSQLEYYTQAYSSGL
Ga0209066_1021582423300027851WatershedsMTINPNQISVAKIYPGNYTNVLRYWHEEKTMQFENANGVQTSYTDQPVGGPVGVVFRPGWIAQQAIGYVDLSY
Ga0209635_1120956313300027888Marine SedimentMAINPNQIAVTKIYPGNYTNVLKYWHETKSVDFLNENGTAETLTNQPVGGPVGVVFRPGWIAQQAVGYVDLSYQALGS
Ga0209668_1100921123300027899Freshwater Lake SedimentMTVNPNQISVAKIYPGNYTNVLRYWHEEKSVVYLNANGTSETLTSQPIGGPVGVIFQPGWIAQQAIGYVDLSYQALGSVNQLE
Ga0135212_102695513300029306Marine HarborMAINANQLHVAKIYPGNYTNVLRYWHEEKSVSFQNANGVDSTFTNQPVGGPVGVVFQPGWIAQ
Ga0135210_103195213300029345Marine HarborMAINSNQLHVAKIYPGNYTNVLRYWHETKTIQYQNANGVDTNLTGQPVGGPVGVVFQPGWIAQ
Ga0119944_104603423300029930AquaticMAINPQQIAVAKIYPGNYTNVLRYWHSTSSFSFLNENGTSETYSNQPVGGPVGVVFRPGWIAQQA
Ga0307379_1009439153300031565SoilMTINSNQLQVAKIYPGNYTNVLRYWHEEKTVQYDNANGVPTTLTGQPVGGPVGVVFRPGWIAQQAIGYVDLSYQALGTNNQ
Ga0307378_1035969223300031566SoilMAINSNQLHVAKIYPGNYTNVLRYWHEEKTMQFENANGVQTSYTNQPVGGPVGVVFRPGWIAQQAVGYVDLSYQAL
Ga0315291_1121851013300031707SedimentMAINSAQLSIAKIYPGNYTNVLRYWHETKTVTYLNENGTSETLTNQPVGGPVGVVLRPGWIAQQAIGYVD
Ga0315900_1074213823300031787FreshwaterMAINPNQLAVSKIYPGNYTNVLKYWHEEKTVVYNNENGTPQTLTGQPVGGPVGVVFRPGWIAQQAVG
Ga0315909_1028825123300031857FreshwaterMTINPNQISVAKIYPGNYTNVLRYWHEEKTMQFENANGVQTSYTEQPVGGPVGVVFQPGWIAQQAIGYVDLSYQALGTTNQL
Ga0315904_1039996113300031951FreshwaterMAINSNQLQVAKIYPGNYTNVLRYWHEEKTVQFENANGVQTSYTNQPVGGPVGVVFRPGWIAQQAVGY
Ga0315904_1119819013300031951FreshwaterMAINSNQLQVAKIYPGNYTNVLRYWHEEKSVVFNNENGTSETLTGQPIGGPVGVVFRPGWIAQQAIGYVDLSYQALGTNNQLDYYTQPYGSGL
Ga0315284_1045602013300032053SedimentMAINSAQLSIAKIYPGNYTNVLRYWHETKTVTYLNENGTSETLTNQPVGGPVGVVLRPGWIAQQAIGYVDL
Ga0315905_1009384943300032092FreshwaterMAINPNQLAVSKIYPGNYTNVLKYWHEEKTVVYNNENGTPQTLTGQPVGGPVGVVFRPGWIAQQAVGYVDLSYQ
Ga0315905_1151364713300032092FreshwaterMAINPLQLQVSKIYPGNYTNVLRYWHKPTTVVYNNANETSTTLTNQPVGGPVGVVYKPGWIAQQAIGYVDLSYQ
Ga0315281_1162705823300032163SedimentMAINPLQLQVSKIYPGNYTNVLRYWHKPTSVVYNNANETSTTLTNQPVGGPVGVVFKPGWIAQQAIGYVDLSYQAGGTTNQLEY
Ga0334986_0240520_788_9883300034012FreshwaterMAINPNQLQVAKIYPGNYTNVLRYWHEEKSVVFNNENGTSETLTDQPIGGPVGVVFRPGWIAQQAIG
Ga0335004_0339909_1_2493300034021FreshwaterMTVNPAQISVAKIYPGNYTNVLRYWHEEKSVVYLNENGTSETLTSQPIGGPVGVIFQPGWIAQQAIGYVDLSYQALGSVNQLE
Ga0334987_0011606_1_2133300034061FreshwaterMTINPNQISVSKIYPGNYTNVLRYWHEEKTMQFENANGVPTNYTNQPVGGPVGVVFRPGWIAQQAIGYVDL
Ga0334987_0118384_512_7333300034061FreshwaterMAINPNQVQVAKIYPGNYTNVLRYWHDEKSVVFNNENGTSETLTNQPIGGPVGVVFRPGWIAQQAILSGQRFR
Ga0335028_0470788_470_7003300034071FreshwaterMAINPNQISVSKIYPGNYTNVLRYWHEAKSVDFLNENGTSETLANQPVGGPVGVIFRPGWIAQQAVGYVDLSYQALG
Ga0310127_100080_2_1963300034072Fracking WaterMAINSNQLQVAKIYPGNYTNVLRYWHEEKSVVFNNENGTSETLTGQPIGGPVGVVFRPGWIAQQA
Ga0310130_0008575_2_2803300034073Fracking WaterMTINPAQISVAKIYPGNYTNVLRYWHEEKSVVYLNENGTSETLTSQPIGGPVGVIFQPGWIAQQAIGYVDLSYQALGSVNQLEYYTQPYGSGL
Ga0335068_0387255_451_6723300034116FreshwaterMTVNPAQISVAKIYPGNYTNVLRYWHEEKSVVYLNENGTSETLTSQPVGGPVGVIFQPGWIAQQAIGYVDLSYQ
Ga0335053_0787846_2_2623300034118FreshwaterMAINPNQISVAKIYPGNYTNVLRYWHEEKSVVYNNENGTSETLVDQPVGGPVGVIFRPGWIAQQAVGYVDLSYQALGSVNQLEYYTK
Ga0348337_159653_362_6223300034418AqueousMAINPNALSVAKIYPGNYTNVLRYWHEEKSVDFKNANGTNTTYTNQPVGGPVGVVFRPGWIAQQAVGYVDLSYQALGTNNQLEYYTK


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.