NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F080352

Metagenome / Metatranscriptome Family F080352

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F080352
Family Type Metagenome / Metatranscriptome
Number of Sequences 115
Average Sequence Length 74 residues
Representative Sequence VRDDGKGIGKRIAELQPDSVGVGIGGMKQRAKEFGGELRLTNAQPGTLVELVIPCNSVLREPRAVLGGCA
Number of Associated Samples 100
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 3.51 %
% of genes near scaffold ends (potentially truncated) 94.78 %
% of genes from short scaffolds (< 2000 bps) 93.04 %
Associated GOLD sequencing projects 95
AlphaFold2 3D model prediction Yes
3D model pTM-score0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (96.522 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil
(10.435 % of family members)
Environment Ontology (ENVO) Unclassified
(26.087 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(53.913 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 15.31%    β-sheet: 12.24%    Coil/Unstructured: 72.45%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.50
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 115 Family Scaffolds
PF00989PAS 9.57
PF08447PAS_3 9.57
PF08281Sigma70_r4_2 8.70
PF04542Sigma70_r2 8.70
PF02518HATPase_c 5.22
PF04366Ysc84 4.35
PF13442Cytochrome_CBB3 3.48
PF11752DUF3309 1.74
PF13426PAS_9 1.74
PF00072Response_reg 0.87
PF00589Phage_integrase 0.87
PF07730HisKA_3 0.87
PF01381HTH_3 0.87
PF03544TonB_C 0.87
PF11821ActD 0.87
PF00034Cytochrom_C 0.87
PF05598DUF772 0.87
PF00528BPD_transp_1 0.87

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 115 Family Scaffolds
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 8.70
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 8.70
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 8.70
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 8.70
COG2930Lipid-binding SYLF domain, Ysc84/FYVE familyLipid transport and metabolism [I] 4.35
COG0810Periplasmic protein TonB, links inner and outer membranesCell wall/membrane/envelope biogenesis [M] 0.87
COG3850Signal transduction histidine kinase NarQ, nitrate/nitrite-specificSignal transduction mechanisms [T] 0.87
COG3851Signal transduction histidine kinase UhpB, glucose-6-phosphate specificSignal transduction mechanisms [T] 0.87
COG4564Signal transduction histidine kinaseSignal transduction mechanisms [T] 0.87
COG4585Signal transduction histidine kinase ComPSignal transduction mechanisms [T] 0.87

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms96.52 %
UnclassifiedrootN/A3.48 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001170|JGI12704J13340_1006341All Organisms → cellular organisms → Bacteria1095Open in IMG/M
3300001471|JGI12712J15308_10039536All Organisms → cellular organisms → Bacteria1208Open in IMG/M
3300002245|JGIcombinedJ26739_100240142All Organisms → cellular organisms → Bacteria1701Open in IMG/M
3300002245|JGIcombinedJ26739_100551810All Organisms → cellular organisms → Bacteria1029Open in IMG/M
3300004091|Ga0062387_101110302All Organisms → cellular organisms → Bacteria → Acidobacteria614Open in IMG/M
3300004092|Ga0062389_101038155All Organisms → cellular organisms → Bacteria1005Open in IMG/M
3300004092|Ga0062389_102564014All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium677Open in IMG/M
3300004092|Ga0062389_102962375All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300005435|Ga0070714_102332780All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300005467|Ga0070706_100454238All Organisms → cellular organisms → Bacteria1192Open in IMG/M
3300005541|Ga0070733_11079793All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300005591|Ga0070761_10191267All Organisms → cellular organisms → Bacteria1210Open in IMG/M
3300005712|Ga0070764_10620219All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300005712|Ga0070764_10706787All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300005921|Ga0070766_10824198All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300006059|Ga0075017_101355755All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Collimonas → unclassified Collimonas → Collimonas sp. OK607559Open in IMG/M
3300006162|Ga0075030_100391894All Organisms → cellular organisms → Bacteria1107Open in IMG/M
3300006174|Ga0075014_100261783All Organisms → cellular organisms → Bacteria897Open in IMG/M
3300006797|Ga0066659_10851971All Organisms → cellular organisms → Bacteria758Open in IMG/M
3300006852|Ga0075433_11547622All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300009143|Ga0099792_10046817All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2089Open in IMG/M
3300009672|Ga0116215_1528440All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium510Open in IMG/M
3300009764|Ga0116134_1262175All Organisms → cellular organisms → Bacteria → Acidobacteria596Open in IMG/M
3300009764|Ga0116134_1327274All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium526Open in IMG/M
3300009824|Ga0116219_10454330All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium711Open in IMG/M
3300010339|Ga0074046_10093291All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.1947Open in IMG/M
3300012202|Ga0137363_10783435All Organisms → cellular organisms → Bacteria → Acidobacteria808Open in IMG/M
3300012207|Ga0137381_11396350All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium592Open in IMG/M
3300012363|Ga0137390_10484961All Organisms → cellular organisms → Bacteria → Acidobacteria1211Open in IMG/M
3300012582|Ga0137358_10965166All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Janibacter → Janibacter terrae554Open in IMG/M
3300012917|Ga0137395_10003256All Organisms → cellular organisms → Bacteria8048Open in IMG/M
3300014162|Ga0181538_10205307All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1104Open in IMG/M
3300014489|Ga0182018_10084241All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1882Open in IMG/M
3300014655|Ga0181516_10618398All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium559Open in IMG/M
3300017955|Ga0187817_10566813All Organisms → cellular organisms → Bacteria → Acidobacteria724Open in IMG/M
3300018023|Ga0187889_10352733All Organisms → cellular organisms → Bacteria → Acidobacteria643Open in IMG/M
3300018038|Ga0187855_10122076All Organisms → cellular organisms → Bacteria1564Open in IMG/M
3300018038|Ga0187855_10639074All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Janibacter → Janibacter terrae620Open in IMG/M
3300018040|Ga0187862_10647595All Organisms → cellular organisms → Bacteria → Acidobacteria622Open in IMG/M
3300018042|Ga0187871_10087919All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1803Open in IMG/M
3300018043|Ga0187887_10657886All Organisms → cellular organisms → Bacteria → Acidobacteria619Open in IMG/M
3300018043|Ga0187887_10705562Not Available596Open in IMG/M
3300018047|Ga0187859_10339423All Organisms → cellular organisms → Bacteria → Acidobacteria818Open in IMG/M
3300018057|Ga0187858_10710408All Organisms → cellular organisms → Bacteria → Acidobacteria599Open in IMG/M
3300019260|Ga0181506_1043413All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium518Open in IMG/M
3300020199|Ga0179592_10221278All Organisms → cellular organisms → Bacteria → Acidobacteria855Open in IMG/M
3300020579|Ga0210407_10446957All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1011Open in IMG/M
3300020580|Ga0210403_10106844All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2271Open in IMG/M
3300021171|Ga0210405_10930166All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium659Open in IMG/M
3300021432|Ga0210384_10083044All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2880Open in IMG/M
3300021433|Ga0210391_10602161All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium863Open in IMG/M
3300021433|Ga0210391_10696066All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium796Open in IMG/M
3300021433|Ga0210391_11372037All Organisms → cellular organisms → Bacteria → Acidobacteria544Open in IMG/M
3300021474|Ga0210390_10032275All Organisms → cellular organisms → Bacteria4276Open in IMG/M
3300022502|Ga0242646_1029098All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium560Open in IMG/M
3300022515|Ga0224546_1001184All Organisms → cellular organisms → Bacteria → Acidobacteria1246Open in IMG/M
3300022557|Ga0212123_10538138All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium750Open in IMG/M
3300022732|Ga0224569_112524All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium594Open in IMG/M
3300024220|Ga0224568_1018158All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium703Open in IMG/M
3300024271|Ga0224564_1099819All Organisms → cellular organisms → Bacteria → Acidobacteria589Open in IMG/M
3300025910|Ga0207684_10448721All Organisms → cellular organisms → Bacteria → Acidobacteria1107Open in IMG/M
3300026318|Ga0209471_1302923All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium530Open in IMG/M
3300026551|Ga0209648_10401051All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium899Open in IMG/M
3300026557|Ga0179587_10211313All Organisms → cellular organisms → Bacteria → Acidobacteria1232Open in IMG/M
3300026557|Ga0179587_10670074All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium683Open in IMG/M
3300027439|Ga0209332_1067811All Organisms → cellular organisms → Bacteria → Acidobacteria648Open in IMG/M
3300027521|Ga0209524_1014948All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1580Open in IMG/M
3300027562|Ga0209735_1011842All Organisms → cellular organisms → Bacteria → Acidobacteria1700Open in IMG/M
3300027562|Ga0209735_1127842All Organisms → cellular organisms → Bacteria → Acidobacteria553Open in IMG/M
3300027565|Ga0209219_1095071All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium735Open in IMG/M
3300027583|Ga0209527_1048370All Organisms → cellular organisms → Bacteria957Open in IMG/M
3300027667|Ga0209009_1187581All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium524Open in IMG/M
3300027696|Ga0208696_1129553All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium825Open in IMG/M
3300027701|Ga0209447_10100732All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium794Open in IMG/M
3300027738|Ga0208989_10004710All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4577Open in IMG/M
3300027745|Ga0209908_10007718All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1707Open in IMG/M
3300027783|Ga0209448_10236625All Organisms → cellular organisms → Bacteria → Acidobacteria604Open in IMG/M
3300027825|Ga0209039_10143590All Organisms → cellular organisms → Bacteria997Open in IMG/M
3300027825|Ga0209039_10293621All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300027829|Ga0209773_10093170All Organisms → cellular organisms → Bacteria1240Open in IMG/M
3300027884|Ga0209275_10538686All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → unclassified Tardiphaga → Tardiphaga sp. CF115667Open in IMG/M
3300027889|Ga0209380_10661187All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium602Open in IMG/M
3300027911|Ga0209698_10369053All Organisms → cellular organisms → Bacteria → Acidobacteria1125Open in IMG/M
3300027911|Ga0209698_11264678All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300028017|Ga0265356_1019101All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium741Open in IMG/M
3300028748|Ga0302156_10450207All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium554Open in IMG/M
3300028859|Ga0302265_1091957All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium985Open in IMG/M
3300028871|Ga0302230_10131399All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium987Open in IMG/M
3300028874|Ga0302155_10080031All Organisms → cellular organisms → Bacteria1467Open in IMG/M
3300029882|Ga0311368_10347666All Organisms → cellular organisms → Bacteria → Acidobacteria1107Open in IMG/M
3300029907|Ga0311329_10183694All Organisms → cellular organisms → Bacteria1618Open in IMG/M
3300029914|Ga0311359_10055248All Organisms → cellular organisms → Bacteria4169Open in IMG/M
3300029944|Ga0311352_10356689All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1206Open in IMG/M
3300029951|Ga0311371_11325112All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium818Open in IMG/M
3300029951|Ga0311371_12328675All Organisms → cellular organisms → Bacteria → Acidobacteria553Open in IMG/M
3300029956|Ga0302150_10332937All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium564Open in IMG/M
3300030013|Ga0302178_10469398All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium552Open in IMG/M
3300030057|Ga0302176_10155764All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium906Open in IMG/M
3300030507|Ga0302192_10270181Not Available715Open in IMG/M
3300030580|Ga0311355_10824177All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium850Open in IMG/M
3300030991|Ga0073994_10858554All Organisms → cellular organisms → Bacteria → Acidobacteria914Open in IMG/M
3300031010|Ga0265771_1009081All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium708Open in IMG/M
3300031022|Ga0138301_1838891All Organisms → cellular organisms → Bacteria675Open in IMG/M
3300031028|Ga0302180_10166264All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1211Open in IMG/M
3300031231|Ga0170824_118589731All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium767Open in IMG/M
3300031708|Ga0310686_104051672Not Available771Open in IMG/M
3300031718|Ga0307474_11231703All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300031753|Ga0307477_10938149All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium570Open in IMG/M
3300031823|Ga0307478_10758961All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium812Open in IMG/M
3300031962|Ga0307479_11224191All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium714Open in IMG/M
3300031962|Ga0307479_12077456All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium516Open in IMG/M
3300032515|Ga0348332_12647086All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium640Open in IMG/M
3300033158|Ga0335077_10251725All Organisms → cellular organisms → Bacteria1957Open in IMG/M
3300033983|Ga0371488_0081610All Organisms → cellular organisms → Bacteria1852Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil10.43%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland9.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil9.57%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil7.83%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil7.83%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa7.83%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog6.09%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil5.22%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds4.35%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.35%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.61%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil2.61%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.74%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland1.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.74%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.74%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.87%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.87%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.87%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.87%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.87%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.87%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.87%
Thawing PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost0.87%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa0.87%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.87%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.87%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.87%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.87%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.87%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.87%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.87%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.87%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001170Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2EnvironmentalOpen in IMG/M
3300001471Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006174Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009672Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaGEnvironmentalOpen in IMG/M
3300009764Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40EnvironmentalOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300010339Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3EnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300014162Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaGEnvironmentalOpen in IMG/M
3300014489Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaGEnvironmentalOpen in IMG/M
3300014655Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaGEnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300018023Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100EnvironmentalOpen in IMG/M
3300018038Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10EnvironmentalOpen in IMG/M
3300018040Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150EnvironmentalOpen in IMG/M
3300018042Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10EnvironmentalOpen in IMG/M
3300018043Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10EnvironmentalOpen in IMG/M
3300018046Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10EnvironmentalOpen in IMG/M
3300018047Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10EnvironmentalOpen in IMG/M
3300018057Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150EnvironmentalOpen in IMG/M
3300019260Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300022502Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022515Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 1-5EnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300022732Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU1Host-AssociatedOpen in IMG/M
3300024220Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU5EnvironmentalOpen in IMG/M
3300024271Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027439Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027521Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027562Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027565Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027583Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027667Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027696Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027701Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027738Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027745Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2MEnvironmentalOpen in IMG/M
3300027783Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027825Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027829Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028017Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4Host-AssociatedOpen in IMG/M
3300028748Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2EnvironmentalOpen in IMG/M
3300028859Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_1EnvironmentalOpen in IMG/M
3300028871Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_1EnvironmentalOpen in IMG/M
3300028874Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_1EnvironmentalOpen in IMG/M
3300029882III_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300029907I_Bog_N1 coassemblyEnvironmentalOpen in IMG/M
3300029914III_Bog_E2 coassemblyEnvironmentalOpen in IMG/M
3300029944II_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300029951III_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300029956Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_2EnvironmentalOpen in IMG/M
3300030013Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3EnvironmentalOpen in IMG/M
3300030057Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1EnvironmentalOpen in IMG/M
3300030507Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2EnvironmentalOpen in IMG/M
3300030580II_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300030991Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031010Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031022Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300031028Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033983Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fractionEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12704J13340_100634123300001170Forest SoilMSQKDQAIVVSVRDDGKGIDKKIAELRPDSVGVGIGGMKQRAREFGGELRLKNADPGTLLELMIPANSALRESSAVLNEYV*
JGI12712J15308_1003953613300001471Forest SoilDGKGIGRRIAELQPDSVGVGIGGMKQRAKEFGGELRLTNAQPGTLVELMIPSTSVLRVPSAVLG*
JGIcombinedJ26739_10024014233300002245Forest SoilGKGIGKKIVELRPDSVGVGIGGMKQRAKELGGVLKLSNLEPGTLVEIEIPCDSGLRDPTTMMNGYGSN*
JGIcombinedJ26739_10055181023300002245Forest SoilGFIVVSVLDDGKGIDERIAELQPGKVGVGIGGMKQRAREFGGELRLTNSAPGTLLELVIPSTSVMREPSAVLDECR*
Ga0062387_10111030213300004091Bog Forest SoilDGKGVDKRIAELQPDSVGVGIGGMKQRAREFGGELRLTNANPGTLVELVIPRRSVLRDPSAALTA*
Ga0062389_10103815513300004092Bog Forest SoilVRDDGKGIGKRIAELQPDSVGVGIGGMKQRAKEFGGELRLTNAQPGTLVELVIPCNSVLREPRAVLGGCA*
Ga0062389_10256401423300004092Bog Forest SoilGDGQIVVSVLDDGKGIDERIAELRPEKVGVGIGGMKQRAREFGGELRLRNADPGTVLELLIPSTSVLRESSTVLNGCA*
Ga0062389_10296237523300004092Bog Forest SoilVRDDGKGIGDRVVEMRGDSVGVGIGGMKQRAKEFGGELRLKNANPGTLVELTLPRTGALRESREVLQS*
Ga0070714_10233278013300005435Agricultural SoilGISLTQKNGVIVVAVRDDGKGVGKKIVDLEPGSVGVGIGGMKQRAKEFGGELRLINANPGTLVELTIPSSSALRQANAVVNVYTAD*
Ga0070706_10045423813300005467Corn, Switchgrass And Miscanthus RhizosphereKDGLIVVAVLDDGKGIDKRVAELRPESVGVGIGGMKQRAKEFGGELRLTNAGPGTLLELRIPSRSVLLEPSAVLR*
Ga0070733_1107979323300005541Surface SoilRDDGKGIDTRVAELQPDSVGVGIGGMKQRAKELGGELRLKNAHPGTLVELLIPSNSVPRETSAALESVPEIVR*
Ga0070761_1019126723300005591SoilDQKISELRPENVGVGIGGMKQRAKEFGGHIRLTNADPGTLLELMIPCSTALRESSTALSAI*
Ga0070764_1062021913300005712SoilGIGRRIAELQPDSVGVGIGGMKQRAKEFGGELRLTNAQPGTLVELMIPGTSVLRVPSAVLG*
Ga0070764_1070678713300005712SoilRDDGKGIGERIAELQPDSVGVGIGGMKQRAREFGGELRLKNTYPGTLVELTIPYSSVLPEPSAVLDGCQSL*
Ga0070766_1082419813300005921SoilKGIGRRIAELQPDSVGVGIGGMKQRAKEFGGELRLTNAQPGTLVELMIPGTSVLRVPSAVLG*
Ga0075017_10135575513300006059WatershedsSIVVSVLDDGKGIDERTAELRPDKVGVGIGGMKQRAREFGGELRLSNVSPGTLLELMIPSNSVLREPNTVLGGCA*
Ga0075030_10039189413300006162WatershedsDERIAELRPEKVGVGIGGMKQRAREFGGELRLRNADPGTVLELMLPSTSVLRESSAVFDGCA*
Ga0075014_10026178313300006174WatershedsVGITLTQNNGQIVVAVRDDGKGIGQNIAELRPESVGVGIGGMRQRAKEFGGELRLVNAQPGTLVELRIPYTSVVREPAGVTGS*
Ga0066659_1085197113300006797SoilDALIVVAVLDDGKGIDKRVAELRPESVGVGIGGMKQRAKEFGGELRLTNADPGTLLELRIPSRSVLLEPSAVLR*
Ga0075433_1154762223300006852Populus RhizosphereSVVRREDEVLVRVRDDGKGISENISELRPDSIGVGIGGMSQRAKEFGGELRVTNAHPGTIVEAVIPCRSAVLQESVASSLIAGRAL*
Ga0099792_1004681743300009143Vadose Zone SoilALIVVAVLDDGKGIDKRVAELRPESVGVGIGGMKQRAKEFGGELRLTNADPGTLLELRIPSRSVLLEPSAVLR*
Ga0116215_152844013300009672Peatlands SoilQREDTMAVAVRDDGKGIGEAIVDLRPDTVGVGIGGMKQRVKEFGGELRLSNTHPGTLVEVMIPCSSLLREPSAVLDGYA*
Ga0116134_126217513300009764PeatlandIAEMRPDSVGVGIGGMKQRARELGGELRLRNAPPGTVVELSIPCRSVSRDSSPVLDVCASD*
Ga0116134_132727423300009764PeatlandIVVAVRDDGKGIGQRIAELQPDSVGVGIGGMKQRVREFGGELRLTNTHPGTLVELVIPYGSVLQQPSAVPDGSHRKFVNAAIR*
Ga0116219_1045433013300009824Peatlands SoilTQREGEIVVGVRDDGKGIGKRIAELQPDSVGVGIGGMKQRAREFGGALRLTNMNPGTLVEIMIPCGSAQQQRSAVPDGSQKFVDAAVR*
Ga0074046_1009329133300010339Bog Forest SoilLDNGKGIDERITELRPESVGVGIGGMKQRAKEFGGELRLRNADPGTLLELTIPSAPGARELTTVLDRCV*
Ga0137363_1078343523300012202Vadose Zone SoilVAVLDDGKGIDKRVAELRPESVGVGIGGMKQRVKDFGGELRLTNADPGTLLELRIPSRSVLLEPSAVLDGCS*
Ga0137381_1139635013300012207Vadose Zone SoilRVAELRPESVGVGIGGMKQRAKEFGGELRLTNADPGTLLELRIPSRSVLLEPSAVLR*
Ga0137390_1048496113300012363Vadose Zone SoilKRVADLRPESVGVGIGGMKQRAKEFGGELRLTNADPGTLLELRIPSRSVLLEPSAVLR*
Ga0137358_1096516613300012582Vadose Zone SoilWITLNQKDGLIVVAVLDDGKGIDKRIAELRPESVGVGIGGMKQRVKEFGGELRLINADPGTLLELRIPSNSVLLEPSAVLR*
Ga0137395_1000325613300012917Vadose Zone SoilIDQKIADLRPESVGVGIGGMKQRAKEFGGELRLSNAAPGTLLELVIPAHSLVREPNPVLEQVR*
Ga0181538_1020530723300014162BogGTVRDDGNGIAEQIVKFRPESIGIGIGGMRQRVKEFSGELRLTNAQPGTLVEIVIPCDSPTPQKAEATA*
Ga0182018_1008424123300014489PalsaTMAQTEGRIVVAVRDDGKGIGKRVAELQPDSVGVGIGGMKQRAREFGGELRLTNTHPGTLVELIIPCSLVLREPSAVSPGPQKLVDAAIQ*
Ga0181516_1061839813300014655BogSKVWVTLTQKEETIVVAVRDDGKGIGKKIAELQPDSVGVGIGGMKQRAKEFGGELRLTNAHPGTLVELMIPCRSVLREPTAILGGCA*
Ga0187817_1056681313300017955Freshwater SedimentKGIDERVAELRSEELGVGIGGMKQRAREFGGELRLRNADPGTLLELMIPSSSVLREPSAVLDGCA
Ga0187889_1035273323300018023PeatlandKDDGRGIGKKIAEMRPDSVGVGIGGMKQRARELGGELRLRNAPPGTVVELSIPCRSVSRDSSPVLDVCASD
Ga0187855_1012207613300018038PeatlandGRISVAVRDDGRGVDKRIAELRPESIGVGLGGMKQRARELGGELRLIDAQPGTLVEITIPCVSGLRDSPPVLDVCASQ
Ga0187855_1063907413300018038PeatlandGRISVAVRDDGRGVDKRIAELRPESIGVGLGGMKQRARELGGELRLIDAQPGTLVEITIPCVSGLRDSPPVLDVCASD
Ga0187862_1064759513300018040PeatlandVLDGGKGIDERIAELRSEKLGVGIGGMKQRAREFGGELRLRNADPGTLLELMIPSSSILREPSAVLDGCT
Ga0187871_1008791913300018042PeatlandHQREGLIVVSVLDDGKGIDERVAELRPEKVGVGIGGMRQRAREFGGELRLRNADPGTLLELVIPANSVLREPSTVLDGCA
Ga0187887_1065788623300018043PeatlandGKGIDEQVADLRPEKVGVGIGGMKQRALEFGGELRLRNASPGTLLELVIPTSAVLRDTSAVLEGVRDL
Ga0187887_1070556223300018043PeatlandVLDDGKGIDQRVAELRPEKMGVGIGGMRQRAKEFGGELRLTNNQPGTLLEIMIPTNAALREPTPVTA
Ga0187851_1004698263300018046PeatlandAELRPESVGVGIGGMKQRAKEFGGELRLTNADPGTLLELVIPSGTALREPSAVLNGCST
Ga0187859_1033942313300018047PeatlandRGIGKKIAEMRPDSVGVGIGGMKQRARELGGELRLRNAPPGTVVELSIPSRSAARDSTPALDACASD
Ga0187858_1071040823300018057PeatlandRVAELRPEKVGVGIGGMRQRAREFGGELRLRNADPGTLLELVIPANSVLREPSSVLDGCA
Ga0181506_104341323300019260PeatlandIVVAVRDDGKGIGKRIVELQPDSVGVGIGGMKQRASEFGGELRLTNAHPGTLVELIIPSSSLLRESSAVLVDARSS
Ga0179592_1022127813300020199Vadose Zone SoilNQKDALIVVAVLDDGKGIDKRVAELRPESVGVGIGGMKQRVKDFGGELRLTNADPGTLLELRIPSRSVLLEPSAVLDGCS
Ga0210407_1044695723300020579SoilRDDGKGIGEQIVELRPDSVGVGIGGMKQRARELGGELRLVNAQPGTLVELTIPCGSVLREPNAVMDGCASD
Ga0210403_1010684413300020580SoilLTQKKGLLVVAVRDDGKGIGKKIVDLEPDSVGVGIGGMKQRAKEFGGELRLTNLNPGTLVELMIPYSSGLREAAILEGCTTTEASAESA
Ga0210405_1093016613300021171SoilITLTQKDGMIVVAVRDDGKGIGQRIAELQPDSVGVGIGGMKQRASEFGGELRLTNTHPGTLVELVIPSGSVLQQRNAVPDGSQKFVDAAIR
Ga0210384_1008304473300021432SoilVWITLHQKDGLIVVAVLDDGKGIEKRVAELRPESVGVGIGGMKQRAKEFGGELRLTNADPGTLLELRIPSTSILPEPSAVLH
Ga0210391_1060216113300021433SoilVTVRDDCKGIGRRIAELQPDSVGVGIGGMKQRAKEFGGELRLTNAEPGTLVELMIPASSVLRVPAALLDGCA
Ga0210391_1069606613300021433SoilVRDDGKGIGKRIAELQPDSVGVGIGGMKQRASEFGGELRLTNTHPGTLVELTIPCSSVLREASPVLEGGPKFVDAGVR
Ga0210391_1137203713300021433SoilAVKDDGKGVGKKIAEMSPDSVGVGIGGMKQRARELGGELRLRNALPGTVVELTIPGRSVSRNSSRMLDVCASD
Ga0210390_1003227513300021474SoilAVRDDGKGIGKRIAELQPDSVGVGIGGMKQRASEFGGELRLTNTHPGTLVELTIPCSSVLREASPVLEGGPKFVDAGVR
Ga0242646_102909813300022502SoilIGQRIAELQPDSVGVGIGGMKQRASEFGGELRLTNTHPGTLVELVIPSGSVLQQRSAVADGSLQKFVDAAIR
Ga0224546_100118423300022515SoilSVLDDGKGIDQRVADLRHESIGVGIGGMKQRAKEFGGELRLANADPGTLLELVIPSALALREATAILNGCSV
Ga0212123_1053813813300022557Iron-Sulfur Acid SpringIGRKIAELQPDSVGVGIGGMKQRAKEFGGELRLRNMDPGTLVELIIPCSSVLREPSAVLDGCA
Ga0224569_11252413300022732RhizosphereITLTQRDGMIVVAVRDDGKGIGKSIAELRPDSVGVGIGGMKQRAKEFGGELRLTNAQPGTLVELMIPCSSVLREPTVV
Ga0224568_101815823300024220Plant LitterRIAELQPDSVGVGIGGMKQRAREFGGKLRLTNMHPGTLVELTIPCSSVLREAGAVLDGHPKFVDATVR
Ga0224564_109981923300024271SoilDGKGVGKKIAEMSPDSVGVGIGGMKQRARELGGELRLRNALPGTVVELTIPSRSVSRDSSPMLDVCASD
Ga0207684_1044872123300025910Corn, Switchgrass And Miscanthus RhizosphereKDGLIVVAVLDDGKGIDKRVAELRPESVGVGIGGMKQRAKEFGGELRLTNAGPGTLLELRIPSRSVLLEPSAVLR
Ga0209471_130292313300026318SoilVWINLNQRDGQISVSVLDDGKGIDQKIADLRPESVGVGIGGMKQRAKEFGGELRLSNAAPGTLLELVIPAHSLVREPNPVLEQVR
Ga0209648_1040105113300026551Grasslands SoilWITLSQREGKIVVDVRDDGKGIGKKIANLQPDSVGVGIGGMKQRAKEFGGELRLTNVHPGTLVELMIPCSSVLREPSGVLTS
Ga0179587_1021131323300026557Vadose Zone SoilKVWITMNQKDALIVVAVLDDGKGIDKRVAELRPESVGVGIGGMKQRVKDFGGELRLTNADPGTLLELRIPSRSVLLEPSAVLDGCS
Ga0179587_1067007413300026557Vadose Zone SoilDKKIAELRPESIGVGIGGMKQRAKEFGGELRLTNAAPGTLLELMIPCSSALREASPVLDGCV
Ga0209332_106781113300027439Forest SoilAGAHKVWINLHQRDGRISVTVLDDGKGIEQKVADLRPESVGVGIGGMKQRAKEFGGELRLSNADPGTLLELIIPAHSVGRDPNPVLEAEGEERTTTIKLHV
Ga0209524_101494813300027521Forest SoilVVSVLDDGKGIDKRVADLRPESVGVGIGGMKQRAKEFGGELRLTNADPGTLLELRIPSRSVLLEPSAVLR
Ga0209735_101184213300027562Forest SoilKDGQIVVAVLDDGKGIDKKIVEMRPDSVGVGIGGMKQRAREFGGKLRLTNADPGTLLELRIPSNSVLLEPSAVLR
Ga0209735_112784213300027562Forest SoilGKGIEQKVADLRPESVGVGIGGMKQRAKEFGGELRLSNADPGTLLELIIPAHSVGRDPNPVLEAEGEERTTTIKLHV
Ga0209219_109507113300027565Forest SoilITLNQKDGLIVVAVLDDGKGIDKRVAELRPESVGVGIGGMKQRAKEFGGELRLTNADPGTLLELRIPSKSVLLEPSTVLN
Ga0209527_104837013300027583Forest SoilLTQNNGLIVVSVRDDGKGIGKKIVDMEPDSVGVGIGGMKQRAREFGGELRLSNANPGTLVELLIPHTSGLREAGALLDAD
Ga0209009_118758113300027667Forest SoilKGIDKRVAELRPESVGVGIGGMKQRAKEFGGELRLTNADPGTLLELRIPSKSVLVEPSTVLN
Ga0208696_112955313300027696Peatlands SoilLTQREDTMAVAVRDDGKGIGEAIVDLRPDTVGVGIGGMKQRVKEFGGELRLSNTHPGTLVEVMIPCSSLLREPSAVLDGYA
Ga0209447_1010073223300027701Bog Forest SoilRVAFGKKIAEQQPDSVGVGIGGMKQRAKEFGGELRLTNAHPGTLVELLIPCSSVMREPITVLDGVPEIRMQG
Ga0208989_1000471023300027738Forest SoilVWITLNQRDGQIIAAVLDDGKGIDKKIEELRPESVGVGIGGMKQRAKEFGGELRLANASPGTLLELRIPCSSALREPSPVLDGCV
Ga0209908_1000771823300027745Thawing PermafrostVVSVLDDGKGIDQRVADLRPESIGVGIGGMKQRAKEFGGELRLANADPGTLLELVIPSALALREATAILNGCSV
Ga0209448_1023662523300027783Bog Forest SoilDGKGVDKRIAELQPDSVGVGIGGMKQRAREFGGELRLTNANPGTLVELVIPRRSVLRDPSAALTA
Ga0209039_1014359013300027825Bog Forest SoilISLHQRDGSILVSVLDDGKGIDERIAELRPEKVGVGIGGMKQRALEFGGELRLTNAVPGTLLELMIPSTSVLREPSRATVMNGCT
Ga0209039_1029362123300027825Bog Forest SoilKVWITLSHTNGMIDVSVKDDGRGIGKKIAEMRPDSVGVGIGGMKQRARELGGELRLRNVPPGTVVELSIPCRSISRDSSAVLGVCASD
Ga0209773_1009317013300027829Bog Forest SoilGSIVVSVRDDGKGIGDRVVEMRADSVGVGIGGMKQRAKEFGGELRLKNANPGTLVELTLPRSGALRESREVLQS
Ga0209275_1053868613300027884SoilIQKDGSIFVSVLDDGKGIDKKIVDLRPESVGVGIGGMKQRAKEFGGELRLTNADPGTLLELMIPSSSALRESSAVLNECT
Ga0209380_1066118723300027889SoilITLTQKEGIIVVAVRDNGKGIGREIEELQPDSVGVGIGGMKQRAKEFGGELRLSNAHPGTLVELMIPCSSVLRESSSVMDDVREAVPE
Ga0209698_1036905323300027911WatershedsDEGKGSDERIAELRPEKVGVGIGGMKQRAREFGGELRLRNADPGTVLELMLPSTSVLRESSAVFDGCA
Ga0209698_1126467813300027911WatershedsGKGIGQNIAELRPESVGVGIGGMRQRAKEFGGELRLVNAQPGTLVELRIPYTSVVREPAGVTGS
Ga0265356_101910123300028017RhizosphereTLSHTNGMIEVSVKDDGRGIGKKIAEMRPDSVGVGIGGMKQRARELGGELRLRNAPPGTVVELSIPSRSVSRDSIPVADVYASD
Ga0302156_1045020723300028748BogEGIIVVAVRDNGKGIRREIEELQPDSVGVGIGGMKQRAKEFGGELRLSNANPGTLVELTIPCSSVLRDSSSVMDDVREAVPE
Ga0302265_109195723300028859BogLITVSVLDDGKGIDQRTAELSPDKLGVGIGGMKQRAKEFGGELRLSNNEPGTLLELMIPAKSLLCEPSAVSV
Ga0302230_1013139923300028871PalsaVRDDGKGIGKKIAEQQPDSVGVGIGGMKQRAKEFGGELRLTNTHPGTLVELMVPCRSVLREPAAILGGCA
Ga0302155_1008003113300028874BogRDDGKGIGQRVAELQPDSVGVGIGGMKQRAKEFGGELRLTNTQPGTLVELLIPTRDVLREAVLS
Ga0311368_1034766633300029882PalsaVLDDGKGIDERIAELRPEKVGVGIGGMKQRALEFGGELRLSNANPGTLLELIIPSTSVLGETNAVLNGCV
Ga0311329_1018369423300029907BogGIIVVAVRDNGKGIRREIEELQPDSVGVGIGGMKQRAKEFGGELRLSNANPGTLVELTIPCSSVLRDSSSVMDDVREAVPE
Ga0311359_1005524863300029914BogREIEELQPDSVGVGIGGMKQRAKEFGGELRLSNANPGTLVELTIPCSSVLRDSSSVMDDVREAVPE
Ga0311352_1035668913300029944PalsaQKVSIRLTQSNGLITVAVRDNGKGISKRVTEQQPDSVGVGIGGMKQRAREFGGELRLTNAQPGTLVELLIPSSSVLKDAHSMLDGCR
Ga0311371_1132511213300029951PalsaVLDDGKGIDERIAELRPDRVGVGIGGMKQRAREFGGELRLKNADPGTLLELMIPSNSVLRESNSILNGVT
Ga0311371_1232867523300029951PalsaSIRLTQSNGLITVAVRDNGKGISKRVTEQQPDSVGVGIGGMKQRAREFGGELRLTNAQPGTLVELLIPSSSVLKDAHSMLDGCR
Ga0302150_1033293723300029956BogDNGKGIRREIEELQPDSVGVGIGGMKQRAKEFGGELRLSNANPGTLVELTIPCSSVLRDSSSVMDDVREAVPE
Ga0302178_1046939813300030013PalsaITLTQREGTIVVAVRDDGKGIGKKIAEQQPDSVGVGIGGMKQRAKEFGGELRLTNTHPGTLVELMVPCRSVLREPAAILGGCA
Ga0302176_1015576413300030057PalsaGKGIDERIAELRPEKVGVGIGGMKQRALEFGGELRLSNANPGTLLELIIPSTSVLGETNAVLNGCV
Ga0302192_1027018123300030507BogLDDGKGIDQRVAELRPEKMGVGIGGMRQRAKEFGGELRLTNNQPGTLLEIMIPTNAALREPTPVTA
Ga0311355_1082417713300030580PalsaVRDDGKGIGKRIAEMQPDSVGVGIGGMKQRASEFGGELRLTNMNPGTLVELMIPCSLVVRESSAVSHRSQKFVDAALQ
Ga0073994_1085855413300030991SoilAKIAELRPEKVGVGIGGMKQRAKEFGGELRLTNVDQGTLLELTIPSNSVVREPAAVLGGD
Ga0265771_100908123300031010SoilVIVVSVLDDGKGIDKKIAELRPDSVGVGIGGMKQRAREFGGELRLTNADPGTLLELTIPQSLALREASAVLNECT
Ga0138301_183889113300031022SoilVAVRDDGKGISKKIVDLEPDSVGVGIGGMKQRAKEFGGELRLTNAEPGTLVELTIPYSSVLREPALSSVDARRSD
Ga0302180_1016626433300031028PalsaGRRIAELQPDSVGVGIGGMKQRAKEFGGELRLTNAQPGTLVELIIPCTAVLRVPATVPLAVLDGCA
Ga0170824_11858973113300031231Forest SoilPVLDDGKGIDQKIADLRPESVGVGIGGMKQRAKEFGGELRLSNAAPVTLLELVIPAHSLVREPNPALEQVRMS
Ga0310686_10405167213300031708SoilKISELRPENVGVGIGGMKQRAKEFGGHIRLTNADPGTLLELMIPCSTALRESSTALSAI
Ga0307474_1123170313300031718Hardwood Forest SoilKIVNLEPDSVGVGIGGMKQRAKEFGGELRLINANPGTLVELTIPYGSSLRETSSVLDGCSAN
Ga0307477_1093814913300031753Hardwood Forest SoilVAVRDNGKGIGRKIAELQPDSVGVGIGGMKQRAKEFGGELRLSNVHPGTLVELIIPSNSVLREPSAVLDGIA
Ga0307478_1075896113300031823Hardwood Forest SoilGAHKVGINLTQKNGVIVVAVRDDGKGIGQKIVNLEPDSVGVGIGGMKQRAKEFGGELRLINANPGTLVELTIPYGSSLRETSSVLDGCSAN
Ga0307479_1122419113300031962Hardwood Forest SoilWINLNQRNGQISVSVLDDGKGIDQKIADLRPESVGVGIGGMKQRAKEFGGELRLSNAAPGTLLELVIPAHSLGREPHPVLEQVRMSQ
Ga0307479_1207745613300031962Hardwood Forest SoilVLDDGKGIDQKIADLRPESVGVGIGGMKQRAKEFGGELRLSNAAPGTLLELVIPAHSLGREPHPVLEQVRMSQ
Ga0348332_1264708613300032515Plant LitterISLTQGNGTIVVAVRDDGKGIGKRIADLQPDSVGVGIGGMKQRAKEFGGELRLTNAQPGTIVELMVPCNSVLREPNVVLDGCA
Ga0335077_1025172543300033158SoilVVAKVRDDGRGIAENVAEQQPGSIGIGIGGMSQRAKEFGGELRLARAHPGTLVEILIPCNLLQETRASA
Ga0371488_0081610_13_2463300033983Peat SoilMIEVSVKDDGRGIGKKIAEMRPDSVGVGIGGMKQRARELGGELRLRNAPPGTVVELTIPCHSVSRDSSPVLNVCASD

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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