Metagenome / Metatranscriptome Family F080428

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F080428
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	132 residues
Representative Sequence	MNKWLRLGIVVLSLATPCLAQEGLTIHSKAKQKWPAAEAEKIYLSACSAVQREFGSNRAVRPQVTVVLGADKDAVLFDEREIMLTKWDRHLFAQGVVVFAFEDLMPVEQRLILAKRAVNWADATVEIERVEK
Number of Associated Samples	92
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.05 %
% of genes near scaffold ends (potentially truncated)	33.91 %
% of genes from short scaffolds (< 2000 bps)	65.22 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (99.130 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil (17.391 % of family members)
Environment Ontology (ENVO)	Unclassified (35.652 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.304 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 33.12% β-sheet: 10.63% Coil/Unstructured: 56.25%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF08281	Sigma70_r4_2	36.52
PF00486	Trans_reg_C	5.22
PF13432	TPR_16	4.35
PF02353	CMAS	3.48
PF04397	LytTR	3.48
PF13414	TPR_11	2.61
PF13191	AAA_16	1.74
PF00174	Oxidored_molyb	1.74
PF13429	TPR_15	1.74
PF01794	Ferric_reduct	0.87
PF13426	PAS_9	0.87
PF00175	NAD_binding_1	0.87
PF05598	DUF772	0.87
PF13620	CarboxypepD_reg	0.87
PF07715	Plug	0.87
PF11154	DUF2934	0.87
PF02954	HTH_8	0.87
PF07110	EthD	0.87
PF00144	Beta-lactamase	0.87
PF00215	OMPdecase	0.87
PF06580	His_kinase	0.87
PF13374	TPR_10	0.87
PF08447	PAS_3	0.87
PF12833	HTH_18	0.87
PF13490	zf-HC2	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	3.48
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	3.48
COG2230	Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases	Lipid transport and metabolism [I]	3.48
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	1.74
COG3915	Uncharacterized conserved protein	Function unknown [S]	1.74
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.87
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.87
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.87
COG2972	Sensor histidine kinase YesM	Signal transduction mechanisms [T]	0.87
COG3275	Sensor histidine kinase, LytS/YehU family	Signal transduction mechanisms [T]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.13 %
Unclassified	root	N/A	0.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.13 %
Unclassified	root	N/A	0.87 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.13 %
Unclassified	root	N/A	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	91.30 %
Unclassified	root	N/A	0.87 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	65.22 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	14.78 %
Unclassified	root	N/A	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	64.35 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	13.04 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	0.87 %
Unclassified	root	N/A	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	64.35 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	13.04 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	0.87 %
Unclassified	root	N/A	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	64.35 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	0.87 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.87 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	0.87 %
Unclassified	root	N/A	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	64.35 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	0.87 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.87 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	0.87 %
Unclassified	root	N/A	0.87 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10108454	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1145	Open in IMG/M
3300001867\|JGI12627J18819_10116335	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1100	Open in IMG/M
3300001867\|JGI12627J18819_10251469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300001867\|JGI12627J18819_10258476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	700	Open in IMG/M
3300002558\|JGI25385J37094_10091926	All Organisms → cellular organisms → Bacteria → Acidobacteria	917	Open in IMG/M
3300002908\|JGI25382J43887_10478382	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300002914\|JGI25617J43924_10046273	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1577	Open in IMG/M
3300002917\|JGI25616J43925_10004316	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6038	Open in IMG/M
3300003505\|JGIcombinedJ51221_10111190	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1095	Open in IMG/M
3300005167\|Ga0066672_10926086	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300005171\|Ga0066677_10430807	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300005174\|Ga0066680_10157922	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1421	Open in IMG/M
3300005181\|Ga0066678_10068464	All Organisms → cellular organisms → Bacteria → Acidobacteria	2071	Open in IMG/M
3300005332\|Ga0066388_100013109	All Organisms → cellular organisms → Bacteria	6686	Open in IMG/M
3300005435\|Ga0070714_100221360	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1739	Open in IMG/M
3300005435\|Ga0070714_100397170	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1302	Open in IMG/M
3300005436\|Ga0070713_100696224	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	970	Open in IMG/M
3300005436\|Ga0070713_100787120	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	911	Open in IMG/M
3300005468\|Ga0070707_100803403	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	904	Open in IMG/M
3300005471\|Ga0070698_101828928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300005518\|Ga0070699_100941014	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	792	Open in IMG/M
3300005536\|Ga0070697_101390423	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300005536\|Ga0070697_101922118	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300005538\|Ga0070731_10182816	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1392	Open in IMG/M
3300005542\|Ga0070732_10100329	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1705	Open in IMG/M
3300005552\|Ga0066701_10285631	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1023	Open in IMG/M
3300005561\|Ga0066699_10010621	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4561	Open in IMG/M
3300006028\|Ga0070717_10004433	All Organisms → cellular organisms → Bacteria	10140	Open in IMG/M
3300006028\|Ga0070717_10014626	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6041	Open in IMG/M
3300006086\|Ga0075019_10052399	All Organisms → cellular organisms → Bacteria → Acidobacteria	2304	Open in IMG/M
3300006162\|Ga0075030_100141763	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1947	Open in IMG/M
3300006173\|Ga0070716_100088000	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1873	Open in IMG/M
3300006755\|Ga0079222_11621232	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300006755\|Ga0079222_11798413	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300006796\|Ga0066665_11037768	All Organisms → cellular organisms → Bacteria → Acidobacteria	627	Open in IMG/M
3300006797\|Ga0066659_10077231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2198	Open in IMG/M
3300006893\|Ga0073928_10000668	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	76264	Open in IMG/M
3300007819\|Ga0104322_139744	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2250	Open in IMG/M
3300010048\|Ga0126373_10052540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3627	Open in IMG/M
3300010358\|Ga0126370_10064790	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2389	Open in IMG/M
3300010366\|Ga0126379_13664717	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300010376\|Ga0126381_100415344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1878	Open in IMG/M
3300011269\|Ga0137392_10057626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2947	Open in IMG/M
3300011270\|Ga0137391_10262021	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1496	Open in IMG/M
3300011271\|Ga0137393_10031895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3992	Open in IMG/M
3300012206\|Ga0137380_10197559	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1825	Open in IMG/M
3300012210\|Ga0137378_10121216	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2413	Open in IMG/M
3300012211\|Ga0137377_10431872	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1255	Open in IMG/M
3300012351\|Ga0137386_10005615	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8334	Open in IMG/M
3300012361\|Ga0137360_11788739	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300012683\|Ga0137398_11161496	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300012917\|Ga0137395_10434612	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	942	Open in IMG/M
3300012923\|Ga0137359_10024677	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5119	Open in IMG/M
3300017822\|Ga0187802_10193751	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	781	Open in IMG/M
3300018007\|Ga0187805_10079781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1475	Open in IMG/M
3300018433\|Ga0066667_10545372	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300020579\|Ga0210407_10455280	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1001	Open in IMG/M
3300020580\|Ga0210403_10569994	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	916	Open in IMG/M
3300020581\|Ga0210399_10007843	All Organisms → cellular organisms → Bacteria → Acidobacteria	8330	Open in IMG/M
3300020583\|Ga0210401_10000811	All Organisms → cellular organisms → Bacteria	37820	Open in IMG/M
3300021046\|Ga0215015_11016313	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1012	Open in IMG/M
3300021170\|Ga0210400_11202765	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300021180\|Ga0210396_10020997	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6049	Open in IMG/M
3300021474\|Ga0210390_11012857	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300021559\|Ga0210409_10094487	All Organisms → cellular organisms → Bacteria	2760	Open in IMG/M
3300022557\|Ga0212123_10000425	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	141144	Open in IMG/M
3300025922\|Ga0207646_11011322	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300025928\|Ga0207700_10367140	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1256	Open in IMG/M
3300025929\|Ga0207664_10097406	All Organisms → cellular organisms → Bacteria	2423	Open in IMG/M
3300025939\|Ga0207665_10168885	All Organisms → cellular organisms → Bacteria → Acidobacteria	1578	Open in IMG/M
3300026295\|Ga0209234_1310587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300026309\|Ga0209055_1067584	All Organisms → cellular organisms → Bacteria → Acidobacteria	1498	Open in IMG/M
3300026315\|Ga0209686_1027011	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2234	Open in IMG/M
3300026328\|Ga0209802_1021701	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3513	Open in IMG/M
3300026514\|Ga0257168_1002350	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2765	Open in IMG/M
3300026527\|Ga0209059_1161003	All Organisms → cellular organisms → Bacteria → Acidobacteria	807	Open in IMG/M
3300026551\|Ga0209648_10002801	All Organisms → cellular organisms → Bacteria	14524	Open in IMG/M
3300027050\|Ga0209325_1000003	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8902	Open in IMG/M
3300027061\|Ga0209729_1018860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	825	Open in IMG/M
3300027071\|Ga0209214_1000100	All Organisms → cellular organisms → Bacteria → Acidobacteria	4145	Open in IMG/M
3300027071\|Ga0209214_1015227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	957	Open in IMG/M
3300027071\|Ga0209214_1019118	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	872	Open in IMG/M
3300027371\|Ga0209418_1000134	All Organisms → cellular organisms → Bacteria	4668	Open in IMG/M
3300027371\|Ga0209418_1001416	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2713	Open in IMG/M
3300027376\|Ga0209004_1035311	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	825	Open in IMG/M
3300027502\|Ga0209622_1012219	All Organisms → cellular organisms → Bacteria → Acidobacteria	1458	Open in IMG/M
3300027548\|Ga0209523_1005396	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2172	Open in IMG/M
3300027548\|Ga0209523_1076660	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300027576\|Ga0209003_1004791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1822	Open in IMG/M
3300027842\|Ga0209580_10179300	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1048	Open in IMG/M
3300027898\|Ga0209067_10112958	All Organisms → cellular organisms → Bacteria → Acidobacteria	1421	Open in IMG/M
3300029636\|Ga0222749_10068258	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1609	Open in IMG/M
3300031057\|Ga0170834_104868250	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1240	Open in IMG/M
3300031231\|Ga0170824_107612988	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1045	Open in IMG/M
3300031715\|Ga0307476_10000973	All Organisms → cellular organisms → Bacteria	18924	Open in IMG/M
3300031718\|Ga0307474_10089675	All Organisms → cellular organisms → Bacteria → Acidobacteria	2294	Open in IMG/M
3300031720\|Ga0307469_11719449	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300031753\|Ga0307477_10172164	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	1509	Open in IMG/M
3300031753\|Ga0307477_10195704	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1407	Open in IMG/M
3300031753\|Ga0307477_10546174	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300031754\|Ga0307475_10058151	All Organisms → cellular organisms → Bacteria → Acidobacteria	2925	Open in IMG/M
3300031754\|Ga0307475_10146585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1872	Open in IMG/M
3300031754\|Ga0307475_10197204	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1608	Open in IMG/M
3300031820\|Ga0307473_10158475	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1297	Open in IMG/M
3300031820\|Ga0307473_10518660	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	808	Open in IMG/M
3300031823\|Ga0307478_10007627	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7465	Open in IMG/M
3300031962\|Ga0307479_10422118	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1318	Open in IMG/M
3300032180\|Ga0307471_100052123	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3384	Open in IMG/M
3300032180\|Ga0307471_100099141	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2637	Open in IMG/M
3300032180\|Ga0307471_100210007	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1958	Open in IMG/M
3300032180\|Ga0307471_100316055	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1656	Open in IMG/M
3300032180\|Ga0307471_103376019	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300032180\|Ga0307471_103445695	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300032205\|Ga0307472_100023990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3405	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.91%
Aquatic	Environmental → Aquatic	6.09%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.91%
Sediment	Environmental → Aquatic → Sediment	2.61%
Freshwater	Environmental → Aquatic → Freshwater	1.74%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.61%
Loam	Environmental → Terrestrial → Soil → Loam	31.30%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.61%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.74%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.74%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.70%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.61%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.74%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.74%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.74%

Habitat	Taxonomy	Distribution
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	17.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	14.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.30%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.48%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.61%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.61%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.74%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.87%
Permafrost Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Permafrost Soil	0.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.87%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007819	Permafrost core soil microbial communities from Svalbard, Norway - sample 2-1-2 Soapdenovo	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027050	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027061	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027376	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_101084542	3300001867	Forest Soil	MTSPMKFMISVLVLATACSAQEGLTVHFKGKQKWPAAEAEKIYFSACSAVQREFGNHQGVKPRVTLVLGADRDVVSLDEREIRLTKWDRHAFAQGVVVFAFEDLMSVEQRLMLAKRAVTWADSTIDVERPAK*
JGI12627J18819_101163351	3300001867	Forest Soil	ILKRTRSISEVSVISAVRFSISVLVLAMACSAQEGLTVHSKGKQNWPAAEAEKIYLSACSAVQREFGSNRLVRPQVTVVLGAEKDVVSFDEREIKLTKWDRHAFAQGVVMFAFEDLMPVEQRLMLAKRAVIWAGSTVDIERVSK*
JGI12627J18819_102514691	3300001867	Forest Soil	MANLFRCFSEHDLTGGEISARGNMTNRLRFLIVVLISATACLAQDGLTVQSKGKQKWPAAEAQKIYLSACLVVQREFGSNRPVAPRVTLVLGASKNEVQFPGQEIRLTKWDRYAFAQGVVWLAFVDLMPSQQRLAIAKQVVNWADATVDVEQLRK*
JGI12627J18819_102584761	3300001867	Forest Soil	MISAMKFMISVLVLATACLAQEGLTVHFKGKQKWPAAEAEKIYFSACSAVQSEFANHQGVKPRVTLVLGADRDVVSLDEREIRLTKWDRHAFAQGVVIFAFEDLMPVEQRLVLAKRAVTWADSTIDV
JGI25385J37094_100919262	3300002558	Grasslands Soil	MNKWLRLGIVVLTLVTPCLAQEGLTIHSKAKQKWPAAEAEKIYLSACSAVQREFGSNRAVRPQVTVVLGADKDAVLFDEREIMLTKWDRHLFAQGVVVFAFEDLMPVEQRLILAKRAVNWADATVEIERVEK
JGI25382J43887_104783822	3300002908	Grasslands Soil	PCLAQEGLTIHSKAKQKWPAAEAEKIYLSACSAVQREFGSNRSVRPQVTVVLGADKDAVLFDEREIMLTKWDRHLFAQGVVVFAFEDLMPVEQRLILAKRAVNWADATVEIERVEK*
JGI25617J43924_100462731	3300002914	Grasslands Soil	MTNRLSLLMVFLILATVCLAQEGLSVQNKGKQKWPAAEAQKIYLSACSVVQREFGSNRPVAPRVTLVLGASKNEVWFQGQEIRLTKWDRYAFAQGVVWLAFVDLMPSQQRLAIAKRAVNWVDATVDLEQLRK*
JGI25616J43925_100043163	3300002917	Grasslands Soil	MTNRLSLLMVFLILATVCLAQEGLSVQNKGKQKWPAAEAQKIYLSACSVVQREFGSNRPVAPRVTLVLGASKNEVWFQGQEIRLTKWDRYAFAQGVVWLAFVDLMPSQQRLAIAKRAVNWVDATVEVEQLRK*
JGIcombinedJ51221_101111902	3300003505	Forest Soil	VISAVRFSISVLVLAMACSAQEGLTVHSKGKQNWPAAEAEKIYLSACSAVQREFGSNRVVRPQVTVVLGAEKDVVSFDEREIKLTKWDRHAFAQGVVMFAFEDLMPVEQRLMLAKRAVIWAGSTVDIER
Ga0066672_109260861	3300005167	Soil	NMNKWLRLGIVVLSLATPCLAQEGLTIHSKAKQKWPAAEAEKIYLSACSAVQREFGSNRAVRPQVTVVLGADKDAVLFDEREIMLTKWDRHLFAQGVVVFAFEDLMPVEQRLILAKRAVNWADATVEIERVEK*
Ga0066677_104308072	3300005171	Soil	MNKWLRLGIVVLSLATPCLAQEGLTIHSKAKQKWPAAEAEKIYLSACSAVQREFGSNRSVRPQVTVVLGADKDAVLFDEREIMLTKWDRHLFAQGVVVFAFEDLMPVEQRLILAKRAVNWADATVEIERVEK*
Ga0066680_101579222	3300005174	Soil	MNKWLRLGIVVLTLVTPCLAQEGLTIHSKAKQKWPAAEAEKIYLSACSAVQREFGSNRAVRPQVTVVLGADKDAVLFDEREIMLTKWDRHLFAQGVVVFAFEDLMPVEQRLILAKRAVNWADATVEIERVEK*
Ga0066678_100684642	3300005181	Soil	MNKWLRLGIVVLSLATPCLAQEGLTIHSKAKQKWPAAEAEKIYLSACSAVQREFGSNRAVRPQVTVVLGADKDAVLFDEREIMLTKWDRHLFAQGVVVFAFEDLMPVEQRLILAKRAVNWADATVEIERVEK*
Ga0066388_1000131096	3300005332	Tropical Forest Soil	MTSQTSPNILRSLRNGRRLTVEVSEASAKRVYRQINMKKSMRLGIVVLCLATACLAQEGLTVRTEGKKRVSATEAEKIYLSACSVVQREFGGTRSVRPRVTLILGANRDAVWFDDREITLTKWDPRLFAQGVVVFAFEDLMPLDQRRVLASRAVNWADATVEIDKVGK*
Ga0070714_1002213603	3300005435	Agricultural Soil	MTNRLSLLMMFLILATVCLAQEGQTVQNKGKQKWPSAEAEKIYLSACSAVQREFGSNRAVRPQVRVVLGADKDVVSFDERELKLTKWNRHAFAQGVVMFAFEDLMPVEQRLMLAKRAVIWADSAVDIKQLRK*
Ga0070714_1003971701	3300005435	Agricultural Soil	VISAVRFSISVLVLALACSAQEGLTVHSKGKQKWPAAEAEKIYLSACSAVQREFGSNRVVRPQVTVVLGADKDVVSFDEREIKLTKWDRHAFAQGVVMFAFEDLMPVEQRLMLAKRAVIWAGSTVDIERLENSGPACDLSLECRTGEPVMARQK*
Ga0070713_1006962241	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VISAVRFSISVLVLAMACSAQEGLTVQSKGKQKWPAAEAEKIYLSACSAVQREFGSNRVVRPQVTVVLGADKDVVSFDEREIKLTKWDRHAFAQGVVMFAFEDLMPVEQRL
Ga0070713_1007871202	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MNKWLRLAIVILSLVTTSLAQEGLSVRTQGKQNVPATEAEKIYLSACSVVQREFGGTKSVRPRVTLILGASRDAVLFDDRKIELTKWEPRLFAQGVVVFAFEDLMPL
Ga0070707_1008034031	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VVLSLATACLAQEGLTIHRKEKQKWPAAEAEKIYLSACSAVQREFGSNRAVRPQVTVVLGSDKDAVLFDEREIRLTKWDRHLFAQGVVVFASEDLMPVEQRLILAKRAVNWADATVDIAS
Ga0070698_1018289281	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VNKWLRTGIVVLSLATACLAQEGLTIHRKEKQKWPAAEAEKIYLSACSAVQREFGSNRAVRPQVTVVLGSDKDAVLFDEREIRLTKWDRHLFAQGVVVFASEDLMPVEQRLTLAKRAVNW
Ga0070699_1009410141	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VKRGPLRGSTILTERNLNQGVNMNKWLKLGIVVLSLATACLAQEGLTIQSKMKQRWPAAEAEKIYLSACSAVQREFGSNRSVRPPVKVVLGADTDTVLFQEREIRLTKWDRQLFAQGVVVLAFQDLMPIEQR
Ga0070697_1013904231	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MNKWLRMGIVVLSLATACLAQEGLTIHSKEKQKWPAAEAEKIYLSACSAVQREFGSNRAVRPQVTVVLGSDKDAVLFDEREIRLTKWDRHLFAQGVVVFASEDLMPVEQRLILAKRAVNWAD
Ga0070697_1019221181	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VKRGPLRGSTILTERNLNQGVNMNKWLKLGIVVLSLATACLAQEGLTIQSKMKQRWPAAEVEKIYLSACSAVQREFGSNRAVRPQVKVVLGADTDTVLFQEREIRLTKWDRQLFAQGVVV
Ga0070731_101828163	3300005538	Surface Soil	MTTAVKVAAFVLAITAACSAQEALSVRNRRNQKWPAAEAQKIYLSACSVVQQEFGRRFPLPPQMTLVLGADKNEVWFTGREIRLTNWNRDAFAQGVVLLAFLDLMPSQQRLTIAKRAVSWADSTVAVEQLAK*
Ga0070732_101003292	3300005542	Surface Soil	VISAVRFSISVLVLAMACSAQEGLTVQSKGKQKWPAAEAEKIYLSACSAVQREFGSNRVVRPQVTVVLGAEKDVVSFDEREIKLTKWDRHAFAQGVVMFAFEDLMPVEQRLMLAKRAVIWAGSTVGIERLENSGLACDLSLERRTGGPVMARQK*
Ga0066701_102856311	3300005552	Soil	NMNKWLRLGIVVLSLATPCLAQEGLTIHSKAKQKWPAAEAEKIYLSACSAVQREFGSNRSVRPQVTVVLGADKDAVLFDEREIMLTKWDRHLFAQGVVVFAFEDLMPVEQRLILAKRAVNWADATVEIERVEK*
Ga0066699_100106211	3300005561	Soil	SFYREINMNKWLRLGIVVLSLATPCLAQEGLTIHSKAKQKWPAAEAEKIYLSACSAVQREFGSNRSVRPQVTVVLGADKDAVLFDEREIMLTKWDRHLFAQGVVVFAFEDLMPVEQRLILAKRAVNWADATVEIERVEK*
Ga0070717_100044337	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MNKWLRMGIVVLSLATACLAQEGLTIHSKEKQKWPAAEAVKIYLSACSAVQREFGSNRAVRPQVTVVLGADKDAVLFDEREIRLTKWDRHLFAQGVVVFAFEDLMPVEQRLILAKRAVNWADATVEIERIDK*
Ga0070717_100146264	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSTAMKFATLVLAFATVCPAQDGLTVRNTGHQKWSAAEAQKIYISAWSIVQQEFGRTLPLAPRVNLVLGADRNEVWLPGREIRLTKWNRDAFAQGVVWLAFENLMTSQQRLSIARRAVNSADATVEVEELKK*
Ga0075019_100523994	3300006086	Watersheds	MKVVKRIPNTEIKTSSEVLVSTAVKLASFVLAFATACSAQDGLSVRNRTNQRWPAAEAQKIYLSACAVVQREFGRTLPLAPQVTLVLGADKNEVWFTGREIRLTKWNRHAFAQGVVWLAFEDLMTSQQRLAIAARAVNWADSTVEVEQLKK*
Ga0075030_1001417633	3300006162	Watersheds	MKVVKRIPNTEIKTSSEVLVSTAVKLASFVLAFATACSAQDGLSVRNRTNQRWPAAEAQKIYLSACAVVQREFGRTLPLAPQVTLVLGADKNEVWFTGREIRLTKWNRHAFAQGVVWLAFEDLMPSQQRLAIAARAVNWADSTVEVEQLKR*
Ga0070716_1000880002	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MNKWLILGILILSLATPCLAQEGLTIHRKAKQKWPAAEAEKIYLSACSTVQREFGSNRAVRPQVTVVLGADKDAVLFDEREIMLTKWDRHLFAQGVVVFAFEDLMPVEQRLILAKRAVNWADATVEIQRVEK*
Ga0079222_116212322	3300006755	Agricultural Soil	LSLATPCLAQEGLTIHSKAKQKWPAAEAEKIYLSACSAVQREFGSNRAVRPQVTVVLGADKDAVLFDEREIMLTKWDRHLFAQGLVVLAFEDLMPVEQRLILAKRAVNWADATVEIERVEK*
Ga0079222_117984132	3300006755	Agricultural Soil	MNKWLILGILILSLATPCLAQEGLTIHRKAKQKWPAAEAEKIYLSACSTVQREFGSNRAVRPQVTVVLGADKDAVLFDEREIMLTKWDRRLFAQGVVVLAFEDLMPVEQRLILAKRAVNWADATVEI
Ga0066665_110377682	3300006796	Soil	MNKWLRLGIVVLTLVTPCLAQEGLTIHSKAKQKWPAAEAEKIYLSACSAVQREFGSNRAVRPQVTVVLGADKDAVLFDEREIMLTKWDRHLFAQGVVVFAFEDLMPVEQRLILAKRAVN
Ga0066659_100772312	3300006797	Soil	TPCLAQEGLTIHSKAKQKWPAAEAEKIYLSACSAVQREFGSNRAVRPQVTVVLGADKDAVLFDEREIMLTKWDRHLFAQGVVVFAFEDLMPVEQRLILAKRAVNWADATVEIERVEK*
Ga0073928_1000066871	3300006893	Iron-Sulfur Acid Spring	MTNRLTSLIVVLFSVTACFAQEGLIVQTQGKQKWPAAEAQKIYLSACSVVQQEFGNSRPVAPRVTLVLGASKNEVLFQGQEVRLTKWDPYGFAQGVVWLAFVDLMPSQQRLAIAKRAVDWVDATVDVEHLRK*
Ga0104322_1397444	3300007819	Permafrost Soil	LIVQTQGKQKWPAAEAQKIYLSACSVVQQEFGNSRPVAPRVTLVLGASKNEVLFQGQEVRLTKWDPYGFAQGVVWLAFVDLMPSQQRLAIAKRAVDWVDATVDVEHLRK*
Ga0126373_100525403	3300010048	Tropical Forest Soil	MKKSMRLGIVALCLATACLAQEGLTVRTEGKKRVSATEAEKIYLSACSVVQREFGGTRSVRPRVTLILGANRDAVWFDDREITLTKWDPRLFAQGVVVFAFEDLMPLDQRRVLASRAVNWAGATVEIDKVGK*
Ga0126370_100647904	3300010358	Tropical Forest Soil	MKKSMRLGIVVLCLATACLAQEGLTVRTEGKKRVSATEAEKIYLSACSVVQREFGGTRSVRPRVTLILGANRDAVWFDDREITLTKWDPRLFAQGVVVFAFEDLMPLDQRRVLASRAVNWADATVEIDKVGK*
Ga0126379_136647171	3300010366	Tropical Forest Soil	LTVEVSEASAKRVYRQINMKKSMRLGIVVLCLATACLAQEGLTVRTEGKKRVSATEAEKIYLSACSVVQREFGGTRSVRPRVTLILGANRDAVWFDDREITLTKWDPRLFAQGVVVFAFEDLMPLDQRRVLASRAVNWADATVEIDKVGK*
Ga0126381_1004153444	3300010376	Tropical Forest Soil	TACLAQEGLTVRTEGKKRVSATEAEKIYLSACSVVQREFGGTRSVRPRVTLILGANRDAVWFDDREITLTKWDPRLFAQGVVVFAFEDLMPLDQRRVLASRAVNWADATVEIDKVGK*
Ga0137392_100576262	3300011269	Vadose Zone Soil	VTKRLTLVIVALALPMACLAQEGLTVHSKGKQKWPAAEAQKIYLSACSVVQREFGGNRLVAPRVTLVLGADKNEAWFQDREIRLTKWDRYGFAQGVVWLAFEGLMPSQQRLTIAKRAVNSVDATVDIEQLRK*
Ga0137391_102620211	3300011270	Vadose Zone Soil	GLTVHSKGKQKWPAAEAQKIYLSACSVVQREFGGNRLVAPRVTLVLGANKNEVGFQGQEIRLKKWDRYGFAQGVVWLAFEDLMPSQQRLTIAKRIVSRADATVDIEQLRK*
Ga0137393_100318953	3300011271	Vadose Zone Soil	LTLVIVALALPMACLAQEGLTVHSKGKQKWPAAEAQKIYLSACSVVQREFGGNRLVAPRVTLVLGADKNEVWFQDREIRLTKWDRYGFAQGVVWLAFEGLMPSQQRLTIAKRAVNSVDATVDIEQLRK*
Ga0137380_101975592	3300012206	Vadose Zone Soil	MNKWLRLGIVVLSLATPCLAQEGLTIHSKAKQKWPAAEAEKIYLSACSAVQREFGSNRSIRPQVTVVLGADKDAVLFDEREIMLTKWDRHLFAQGVVVFAFEDLMPVEQRLILAKRAVNWADATVEIERVEK*
Ga0137378_101212161	3300012210	Vadose Zone Soil	GSFYREVNMNKWLRLGIVVLSLATPCLAQEGLTIHSKAKQKWPAAEAEKIYLSACSAVQREFGSNRAVRPQVTVVLGADKDAVLFDEREIMLTKWDRHLFAQGVVVFAFEDLMPVEQRLILAKRAVNWADATVEIERVEK*
Ga0137377_104318722	3300012211	Vadose Zone Soil	TPCLAQEGLTIHSKAKQKWPAAEAEKIYLSACSAVQREFGSNRSVRPQVTVVLGADKDAVLFDEREIMLTKWDRHLFAQGVVVFAFEDLMPVEQRLILAKRAVNWADATVEIERVEK*
Ga0137386_100056153	3300012351	Vadose Zone Soil	LGIVVLSLATPCLAQEGLTIHSKAKQKWPAAEAEKIYLSACSAVQREFGSNRAVRPQVTVVLGADKDAVLFDEREIMLTKWDRHLFAQGVVVFAFEDLMPVEQRLILAKRAVNWADATVEIERVEK*
Ga0137360_117887391	3300012361	Vadose Zone Soil	CLAQEGLTIHSKAKQKWPAAEAEKIYLSACSAVQREFGSNRAVRPQVTVVLGADKDAVLFDEREIMLTKWDRHLFAQGVVVFAFEDLMPVEQRLILAKRAVNWADATVEIERVEK*
Ga0137398_111614962	3300012683	Vadose Zone Soil	HFGVNVTKRLTLVIVALALPMACLAQEGLTVHSKGKQKWPAAEAQKIYLSACSVVQREFGGNRLVAPRVTLVLGADKNEVWFQDREIRLTKWDRYGFAQGVVWLAFEGLMPSQQRLTIAKRAVNSVDATVDIEQLRK*
Ga0137395_104346122	3300012917	Vadose Zone Soil	VTKRLTLVIVALALPMACLAQEGLTVHSKGKQKWPAAEAQKIYLSACSVVQREFGGNRLVAPRVTLVLGADKNEVWFQDREIRLTKWDRYGFAQGVVWLAFEGLMPSQQRLTIAKRAVNSLDATVDIEQLRK*
Ga0137359_100246773	3300012923	Vadose Zone Soil	MNKWLRLGIVVLTLVTPCLAQEGLTIHSNAKQKWPAAEAEKIYLSACSAVQREFGSNRAVRPQVTVVLGADKDAVLFDEREIMLTKWDRHLFAQGVVVFAFEDLMPVEQRLILAKRAVNWADATVEIERVEK*
Ga0187802_101937511	3300017822	Freshwater Sediment	MTNRMRFLIVVLILATACLAQEGLTVHSKVKQKWPAAETQKIYLAACSVVQREFGGNRSVTPTMTLVLGGDKNEVAIDKREIRLTKWDRYLFAQGVVILAFEDLMMERRTAMAQRAVTWMDATVDVEQLRK
Ga0187805_100797812	3300018007	Freshwater Sediment	MTNRLRFLIVVLISATACLAQDGLTVQNKGKQKWSAAEAQKIYLSACSAVQREFGSNRPVAPRVTLVLGASKNEVWFQDQEIRLTKWDRYAFAQGVVWLAFVDLMPSQQRLAIAKQVVNWADATVDVEQLRK
Ga0066667_105453721	3300018433	Grasslands Soil	FHREVNMNRWLRLGIVVLTLVTPCLAQEGLTIHSKAKQKWPAAEAEKIYLSACSAVQREFGSNRAVRPQVTVVLGADKDAVLFDEREIMLTKWDRHLFAQGVVVFAFEDLMPVEQRLILAKRAVNWADATVEIERVEK
Ga0210407_104552802	3300020579	Soil	VISAVRFSIFVLVLAMACSAQEGLTVHSKGKQKWPAAEAEKIYLSACSAVQREFGSNRVVRPQITVVLGADKDVVSFDEREIKLTKWDRHAFAQGVVMFAFEDLMPVEQRLMLAKRAVIWAGSTVDIERVSK
Ga0210403_105699941	3300020580	Soil	MASAAKFGVFVLALAVVCIAQEGLTVQNKGNQKWPAEEGQKIYLSACSVVQREFGGNRSVAPRVTLVLGADKNEVWFFGKEVRLTKWDSYAFAQGVVWLAFEDLMPPPQRLTIAKRAVNWADSTVEIERLTK
Ga0210399_100078436	3300020581	Soil	VISAVRFSIFVLVLAMACSAQEGLTVHSKGKQKWPAAEAEKIYLSACSAVQREFGSNRVVRPQITVVLGADKDVVSFDEREIKLTKWDRHAFAQGVVMFAFEDLMPVEQRLMLAKRAVIWAGSTVGIERLENSGLACDLSLECRTGGPVMARQK
Ga0210401_1000081126	3300020583	Soil	VISAVRFSISVLVLAMACSAQEGLTVHSKGKQNWPAAEAEKIYLSACSAVQREFGSNRVVRPQVTVVLGAEKDVVSFDEREIKLTKWDRHAFAQGVVMFAFEDLMPVEQRLMLAKRAVIWAGSTVDIERVSK
Ga0210401_105886141	3300020583	Soil	MTDRLRFLIVLLILTTVCLAQEGLTVQSKGKQKWPAAEANKIYLSACSVVQREFGATHSVAPTITLVLGANSNVVRFEEREIRLTKWDRNAFAQGVVMLAFEDVMLVRRVAMAKRAVIWVDTTVDVERLTK
Ga0215015_110163132	3300021046	Soil	MTNRLSLLMVLLILATVCLAQEGLSVQNKGKQKWPGAEAEKIYLSACSVVQREFGSNRPVAPRVTLLLGASKNEVWFQGQEIRLTKWDRYAFAQGVVWLAFVDLMPSQQRLAIAKRAVNWVDATVDVGQLRK
Ga0210400_112027651	3300021170	Soil	IFVLVLAMACSAQEGLTVHSKGKQKWPAAEAEKIYLSACSAVQREFGSNRVVRPQITVVLGADKDVVSFDEREIKLTKWDRHAFAQGVVMFAFEDLMPVEQRLMLAKRAVIWAGSTVGIERLENSGLACDLSLECRTGGPVMARQK
Ga0210396_100209975	3300021180	Soil	MISPMKFIISVLALATACLAQEGPTVHFKGKQNWPAAEAEKIYLSACSAVRREFGSNRAVRPQLTVVLGADKDEVSFDEREIRLTKWDRHAFAEGVVIFAFEDLMSVEQRLTLAKRAVTWADSTVDVERPSK
Ga0210390_110128571	3300021474	Soil	SVLVLAMACSAQEGLTVHSKGKQNWPAAEAEKIYLSACSAVQREFGSNRVVRPQVTVVLGAEKDVVSFDEREIKLTKWDRHAFAQGVVMFAFEDLMPVEQRLMLAKRAVIWAGSTVDIERVSK
Ga0210409_100944871	3300021559	Soil	VISAVRFSISVLVLAMACSAQEGLTVHSKGKQNWPAAEAEKIYLSACSAVQREFGSNRVVRPQVTVVLGAEKDVVSFDEREIKLTKWDRHAFAQGVVMFAFEDLMPVEQRLMLAKRAVIWAGSTV
Ga0212123_10000425124	3300022557	Iron-Sulfur Acid Spring	MTNRLTSLIVVLFSVTACFAQEGLIVQTQGKQKWPAAEAQKIYLSACSVVQQEFGNSRPVAPRVTLVLGASKNEVLFQGQEVRLTKWDPYGFAQGVVWLAFVDLMPSQQRLAIAKRAVDWVDATVDVEHLRK
Ga0207646_110113221	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VNKWLRTGIVVLSLATACLAQEGLTIHRKEKQKWPAAEAEKIYLSACSAVQREFGSNRAVRPQVTVVLGADKDAVLFDEREIRLTKWDRHLFAQGVVVFASEDLMPVEQRLILAKRAVNWADATVDIAS
Ga0207700_103671402	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VISAVRFSISVLVLAMACSAQEGLTVQSKGKQKWPAAEAEKIYLSACSAVQREFGSNRVVRPQVTVVLGADKDVVSFDEREIKLTKWDRHAFAQGVVMFAFEDLMPVEQRLMLAKRAVIWADSAVDIKQLRK
Ga0207664_100974063	3300025929	Agricultural Soil	MTNRLSLLMMFLILATVCLAQEGQTVQNKGKQKWPSAEAEKIYLSACSAVQREFGSNRAVRPQVRVVLGADKDVVSFDERELKLTKWNRHAFAQGVVMFAFEDLMPVEQRLMLAKRAVIWADSAVDIKQLRK
Ga0207665_101688852	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MNKWLILGILILSLATPCLAQEGLTIHRKAKQKWPAAEAEKIYLSACSTVQREFGSNRAVRPQVTVVLGADKDAVLFDEREIMLTKWDRRLFAQGVVVLAFEDLMPVEQRLILAKRAVNWADATVEIERVEK
Ga0209234_13105871	3300026295	Grasslands Soil	LTIHSKAKQKWPAAEAEKIYLSACSAVQREFGSNRAVRPQVTVVLGADKDAVLFDEREIMLTKWDRHLFAQGVVVFAFEDLMPVEQRLILAKRAVNWADATVEIERVEK
Ga0209055_10675841	3300026309	Soil	MNKWLRLGIVVLTLVTPCLAQEGLTIHSKAKQKWPAAEAEKIYLSACSAVQREFGSNRAVRPQVTVVLGADKDAVLFDEREIMLTKWDRHLFAQGVVVFAFEDLMPVEQRLILAKRAVNWADATVEI
Ga0209686_10270114	3300026315	Soil	MNKWLRLGIVVLSLATPCLAQEGLTIHSKAKQKWPAAEAEKIYLSACSAVQREFGSNRSVRPQVTVVLGADKDAVLFDEREIMLTKWDRHLFAQGVVVFAFEDLMPVEQRLILAKRAVNWADATVEIERVEK
Ga0209802_10217014	3300026328	Soil	MNKWLRLGIVVLSLATPCLAQEGLTIHSKAKQKWPAAEAEKIYLSACSAVQREFGSNRAVRPQVTVVLGADKDAVLFDEREIMLTKWDRHLFAQGVVVFAFEDLMPVEQRLILAKRAVNWADATVEIERVEK
Ga0257168_10023503	3300026514	Soil	VTKRLTLVIVALALPMACLAQEGLTVHSKGKQKWPAAEAQKIYLSACSVVQREFGGNRLVAPRVTLVLGADKNEVWFQDREIRLTKWDRYGFAQGVVWLAFEGLMPSQQRLTIAKRAVNSVDATVDIEQLRK
Ga0209059_11610031	3300026527	Soil	MNKWLRLGIVVLTLVTPCLAQEGLTIHSKAKQKWPAAEAEKIYLSACSAVQREFGSNRAVRPQVTVVLGADKDAVLFDEREIMLTKWDRHLFAQGVVVFAFEDLMPVEQRLILAKRA
Ga0209648_100028018	3300026551	Grasslands Soil	MTNRLSLLMVFLILATVCLAQEGLSVQNKGKQKWPAAEAQKIYLSACSVVQREFGSNRPVAPRVTLVLGASKNEVWFQGQEIRLTKWDRYAFAQGVVWLAFVDLMPSQQRLAIAKRAVNWVDATVDLEQLRK
Ga0209325_10000035	3300027050	Forest Soil	VISAVRFSISVLVLAMACSAQEGLTVHSKGKQNWPAAEAEKIYLSACSAVQREFGSNRLVRPQVTVVLGAEKDVVSFDEREIKLTKWDRHAFAQGVVMFAFEDLMPVEQRLMLAKRAVIWAGSTVDIERLENSGPLATCLWSAAPGSR
Ga0209729_10188601	3300027061	Forest Soil	VISAVRFSISVLVLAMACSAQEGLTVHFKGKQKWPAAEAEKIYLSACSAVQREFGSNRVVRPQVTVVLGADKDVVSFDEREIKLTKWDRHAFAQGVVMFAFEDLMPVEQRLMLAKRAVIWADSTVDIERLAK
Ga0209214_10001005	3300027071	Forest Soil	VISAVRFSISVLVLALACSAQEGLTVHSKGKQKWPAAEAEKIYLSACSAVQREFGSNRVVRPQVTVVLGADKDVVSFDEREIKLTKWDRHAFAQGVVMFAFEDLMPVEQRLMLAKRAVIWAGSTVDIERVSK
Ga0209214_10152272	3300027071	Forest Soil	MTSPMKFMISVLVLATACSAQEGLTVHFKGKQKWPAAEAEKIYFSACSAVQSEFANHQGVKPRVTLVLGADRDVVSLDEREIRLTKWDRHAFAQGVVIFAFEDLMPVEQRLVLAKRAVTWADSTIDVERPAK
Ga0209214_10191182	3300027071	Forest Soil	MSTAMKFATLVLAFATVCPAQDGLTVRNTGHQKWSAAEAQKIYISAWSIVQQEFGRTLPLAPRVNLVLGADRNEVWLPGREIRLTKWNRDAFAQGVVWLAFENLMTSQQRLSIARRAVNSADATVEVEELKK
Ga0209418_10001342	3300027371	Forest Soil	MACSAQEGLSIYSKGKQNWLAGEAERIYLLACSAVQREFGSNRVVRPQVTVVLGADKDVVSFDEREIKLTKWDRHAFAQGVVMFAFEDLMPVEQRLMLAKRAVIWADSTVDIERLAK
Ga0209418_10014163	3300027371	Forest Soil	MISAMKFMISVLVLATACLAQEGLTVHFKGKQKWPAAEAEKIYFSACSAVQSEFANHQGVKPRVTLVLGADRDVVSLDEREIRLTKWDRHAFAQGVVLFAFEDLMSVEQRLMLAKRAVTWADSTIDVERPAK
Ga0209004_10353111	3300027376	Forest Soil	MANLFRCFSEHDLTGGEISARGNMTNRLRFLIVVLISATACLAQDGLTVQSKGKQKWPAAEAQKIYLSACSVVQREFGSNRPVAPRVTLVLGASKNEVWFQGQEIRLTKWDRYAFAQGVVWLAFVDLMPSQQRLAIAKRAVNWVDATVDAEQLRK
Ga0209622_10122192	3300027502	Forest Soil	MISAMKFMISVLVLATACLAQEGLTVHFKGKQKWPAAEAGKIYLSACSAVQREFGSNRVVRPQVTVVLGAEKDVVSFDEREIKLTKWDRYAFAQGVVMFAFEDLMPVEQRLMLAKRAVIWAGSTVDIERVSK
Ga0209523_10053962	3300027548	Forest Soil	ILGILILSLATPCLAQEGLTIHRKAKQKWPAAEAEKIYLSACSAVQREFGSNRMVRPQVTVVLGADKDVVSFDEREIKLTKWDRHAFAQGVVMFAFEDLMPVEQRLMLAKRAVIWAGSTVDIERLPK
Ga0209523_10766601	3300027548	Forest Soil	TNRFRFLIVVLISATACLAQDGLTVQSKGKQKWPAAEAQKIYLSACLVVQREFGSNRPVAPRVTLVLGASKNEVQFPGQEIRLTKWDRYAFAQGVVWLAFVDLMPSQQRLAIAKQVVNWADATVDVEQLRK
Ga0209003_10047912	3300027576	Forest Soil	MTNRLRFLIVVLISATACLAQDGLTVQSKGKQKWPAAEAQKIYFSACSVVQRKFGSNRPVAPRVTLVLGASKNEVQFPGQEIRLTKWDRYAFAQGVVWLAFVDLMPSQQRLAIANQVVNWADATVDVEQLRK
Ga0209580_101793002	3300027842	Surface Soil	VISAVRFSISVLVLAMACSAQEGLTVQSKGKQKWPAAEAEKIYLSACSAVQREFGSNRVVRPQVTVVLGAEKDVVSFDEREIKLTKWDRHAFAQGVVMFAFEDLMPVEQRLMLAKRAVIWAGSTVDIERLENSGPACDLSLECRTGGPVMARQK
Ga0209067_101129582	3300027898	Watersheds	MKVVKRIPNTEIKTSSEVLVSTAVKLASFVLAFATACSAQDGLSVRNRTNQRWPAAEAQKIYLSACAVVQREFGRTLPLAPQVTLVLGADKNEVWFTGREIRLTKWNRHAFAQGVVWLAFEDLMTSQQRLAIAARAVNWADSTVEVEQLKK
Ga0222749_100682582	3300029636	Soil	VISAVRFSIFVLVLAMACSAQEGLTVHSKGKQKWPAAEAEKIYLSACSAVQQEFGSNRVVRPQVTVVLGAEKDVVSFDEREIKLTKWDRHAFAQGVVMFAFEDLMPVEQRLM
Ga0170834_1048682502	3300031057	Forest Soil	MTNRLRFLIVILISATACLGQDGLTVQNKGKQKWSAAEAQKIYLSTCSAVQREFGSNRPVAPRVTLVLGASKNEVWFQDQEIRLTKWDRYAFAQGVVWLAFVDLMPSQQRLAIAKQVVNWADATVDVEQLRK
Ga0170824_1076129881	3300031231	Forest Soil	MMTPEALRDHYHSLTWIYRTFQRGEFIADAFSEHDLNGWEMSARGNMTNRLRFLIAVLISATACLAQDGLIVQSKGKRKWPSAEAQKIYLSACSVVQREFGSNRPVAPRVTLVLGASKNEVWFQGEEIRLTKWDRYAFAQGVVRLAFVNLMPSQQRLAIAKRAVNWVDATVDIEQLRK
Ga0307476_1000097310	3300031715	Hardwood Forest Soil	MTNRLRFLIVVLISATACLAQDGLTVQSKGKQKWPAAEAQKIYFSACSVVQRKFGSNRPVAPRVTLVLGANKNSVEFQGQEIRLTKWDRYAFAQGVVWLAFVDLMPSQQRLAIAKQVVSWADATVDIKQLRK
Ga0307474_100896752	3300031718	Hardwood Forest Soil	VISAVRFSISVLVLAMACSAQEGLTVQSKGKQKWPAAEAEKIYLSACSAVQREFGSNRVVRPQVTVVLGADKDVVSFDEREIKLTKWDRHAFAQGVVMFAFEDLMPVEQRLMLAKRAVIWAGSTVDIERLENSGPACDLSLECRTGGPVMARQK
Ga0307469_117194491	3300031720	Hardwood Forest Soil	KWLRMGIVVLSLATACIAQEGLTIHSKEKQKWPAAEAEKIYLSACSAVQREFGSNRAVRPQVTVVLGADKDAVLFDEREIRLTKWDPHLFAQGVVVFAFEDLMPVEQRLILAKRAVNWADATVDIERIEK
Ga0307477_101721641	3300031753	Hardwood Forest Soil	VQSKGKQKWPAAEAEKIYLSACSAVQREFGSNRVVRPQVTVVLGADKDVVSFDEREIKLTKWDRHAFAQGVVMFAFEDLMPVEQRLMLAKRAVIWAGSTVDIERLENSGPACDLSLECRTGGPVMARQK
Ga0307477_101957042	3300031753	Hardwood Forest Soil	MACSGQEGLTVHNKGKQKWPAAEAEKIYLSACSVVQRDFGSNRVVRPQVTVVLGADKDVVSFDEREIKLTKWDRHAFAQGVVMFAFEDLMPVEQRLMLAKRAVIWADSTVDIERLAK
Ga0307477_105461741	3300031753	Hardwood Forest Soil	VISAVRFSISVLVLAMACSAQEGLTVHNKGKQKWPAAEAEKIYLSACSAVQRDFGSNRVVRPQVTVVLGADKDVVSFDDEKSSLPNGIVTPSPRGVVMFAFEDLMPVEQRLMLAKRAVIWADSTVDIERLAK
Ga0307475_100581515	3300031754	Hardwood Forest Soil	MSAVRFTISVLVLAMACSAQEGLTVHFKGKQKWPAAEAEKIYLSACSAVQREFGSNRAVRPQVIVVLGADKDEASLDEREIRLTKWDRHAFAQGVVLFAFEELMPVEQRLMLAKRAVIWADSTVDIERLAK
Ga0307475_101465851	3300031754	Hardwood Forest Soil	VISAVRFTISVLVLAMACSAQEGLTVHNKGKQKWPAAEAEKIYLSACSAVQRDFGSNRVVRPQVTVVLGADKDVVSFDDEKSSLPNGIVTPSPRGVVMFAFEDLMPVEQRLMLAKRAVIWADSTVDIERLAK
Ga0307475_101972042	3300031754	Hardwood Forest Soil	VKSVLKLPRLISEVSVFSPVKFTISVLVLTATCLAQKGMTVHFKGQKKWPAAEAEKIYVSACSAIQREFGSNRTVRPQVIVVLGADKDEVSFDEREIRLTKWDRHAFAQGVVLFAFEDLMPVEQRLILANRAVIWADSTVDVERVAK
Ga0307473_101584751	3300031820	Hardwood Forest Soil	MTKGLRLGIAVLILVAACLAQEGLTVHSKGKQKWPAAEAEKIYQSSCSAVEREFGSNRAVRPQVTVVLGADKDAVLFDEREIRLTKWDRHLFAQGVVVFAFEDLMPVEQRLI
Ga0307473_105186602	3300031820	Hardwood Forest Soil	VKQGRLRGSTILTERKLDQGVNMNKWLKLGIVILSLATASFAQEGLTIQSKAKQRWPAAEAEKIYLSACSAVQREFGTNRAVRPQVKVVLGADTDGVLLHEREIRLTKWDRQLFAQGVVVLAFQDLMPVEQRVTLANRAVNWADATVEAK
Ga0307478_100076272	3300031823	Hardwood Forest Soil	MIGPMKFTISILVLATACLAQEALTVHFKGKQKWPAAEAEKIYLSACSAVQHEFGSNRAVRPQVTVVLGADQDEASLDEREIRLTKWDRHAFAQGVVLFAFEDLMPVEQRLMLAKRAVIWADSTVDVERLAK
Ga0307479_104221182	3300031962	Hardwood Forest Soil	MTKGWTFAFLVLTLATACSAQEGLTVHRNGKQKMPTAEAEKVYLSACSAVQREFGANRSVRPRVTLVLGADKNIALPDQREIRLTKWDRFLFAQGIVLFAFDELMTANQRMTLAKRAVSWADATVEIEREAK
Ga0307471_1000521232	3300032180	Hardwood Forest Soil	MFSPVKITLSVLVLATACLAQEVMTIHFKGKQKWPAAEAEKIYLSACSAVQHEFGSNRAVRPQVTVVLGADKDEVSFDEREIRLTKWNRHAFAQGVVLFAFEDLMPVDQRLILAKRAVIWADATVEVERLAK
Ga0307471_1000991412	3300032180	Hardwood Forest Soil	MTNRLSFLIVALILATACLAQDGLTVHSKGKQKWPAAEAQKIFLSACSVVQREFGGNRSVAPRVTLVLGADKNEVWFQGREIRLTKWDRYAFADGVIWLAFEDLMPSQQRLTVGKRIVNWVDATVDIEQLRK
Ga0307471_1002100071	3300032180	Hardwood Forest Soil	VISAVRFTISVLVLAMACSAQEGLSIHSKGKQNWPAAEAEKIYLSACSAVQREFGSNRAVRPQVTVVLGADKDVVSFDEREIRLTKWDRRAFAQGVVMFAFEDLMPVEQRLMLAKRAVIWADSTVDIERLAK
Ga0307471_1003160552	3300032180	Hardwood Forest Soil	VISAVRFSISVLVLAMACSAQEGLTVHSKGKQNWPAAEAEKIYLSACSAVQREFGSNRLVRPQVTVVLGAEKDVVSFDEREIKLTKWDRHAFAQGVVMFAFEDLMPVEQRLMLAKRAVIWAGSTVDVERVSK
Ga0307471_1033760192	3300032180	Hardwood Forest Soil	VKQGRLRGSTILTERKLDQGVNMNRWLKLGIVILSLATASFAQEGLTIQSKVKQRWPAAEAEKIYLSACSAVQREFGSNRAVRPQVKVVLGADTDTVLFHEREIRLTKWDRQLFAQGVVV
Ga0307471_1034456951	3300032180	Hardwood Forest Soil	LEFLGRFSSQLFPPGNSTIDGEEISSGGNMTKGLRLGIAVLILVAACLAQEGLTVHSKGKQKWPAAEAEKIYQSSCSAVEREFGSNRAVRPRVTVVLGADKNKALVDEREIWLTKWDRHLFAQGVVVFAFEDLMPVEQRLTLAKRAVNWADATVEVERVEK
Ga0307472_1000239902	3300032205	Hardwood Forest Soil	MNKWLRMGIVVLSLATACLAQEGLTIHSKEKQKWPAAEAEKIYLSACSAVQREFGSNRAVRPQVTVVLGADKDAVLFDEREIRLTKWDRHLFAQGVVVFAFEDLMPVEQRLILAKRAVNWADATVEIQRVEK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080428

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences