NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F080573

Metagenome / Metatranscriptome Family F080573

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F080573
Family Type Metagenome / Metatranscriptome
Number of Sequences 115
Average Sequence Length 64 residues
Representative Sequence VQEIAPGLRRWTAWHDHWEENVGSVAVETGDGLVLIDPLDPPRDLCEPDHVLVTVYWHGR
Number of Associated Samples 105
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 53.51 %
% of genes near scaffold ends (potentially truncated) 96.52 %
% of genes from short scaffolds (< 2000 bps) 87.83 %
Associated GOLD sequencing projects 105
AlphaFold2 3D model prediction Yes
3D model pTM-score0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (80.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(19.130 % of family members)
Environment Ontology (ENVO) Unclassified
(33.913 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(40.870 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 34.09%    Coil/Unstructured: 65.91%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.76
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
d.157.1.1: Zn metallo-beta-lactamased6tm9a_6tm90.71564
d.157.1.0: automated matchesd5zioa_5zio0.71536
d.157.1.0: automated matchesd5ndea_5nde0.70939
d.157.1.12: Ava3068-liked2p97a12p970.70925
d.157.1.3: ROO N-terminal domain-liked1vmea21vme0.70234

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 115 Family Scaffolds
PF00364Biotin_lipoyl 18.26
PF00005ABC_tran 12.17
PF07883Cupin_2 6.96
PF02436PYC_OADA 6.09
PF00361Proton_antipo_M 4.35
PF07722Peptidase_C26 4.35
PF13520AA_permease_2 2.61
PF13177DNA_pol3_delta2 2.61
PF00144Beta-lactamase 2.61
PF04237YjbR 2.61
PF09362DUF1996 1.74
PF00370FGGY_N 1.74
PF01408GFO_IDH_MocA 1.74
PF02397Bac_transf 0.87
PF13561adh_short_C2 0.87
PF13280WYL 0.87
PF01220DHquinase_II 0.87
PF01344Kelch_1 0.87

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 115 Family Scaffolds
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 2.61
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 2.61
COG2315Predicted DNA-binding protein with ‘double-wing’ structural motif, MmcQ/YjbR familyTranscription [K] 2.61
COG2367Beta-lactamase class ADefense mechanisms [V] 2.61
COG07573-dehydroquinate dehydrataseAmino acid transport and metabolism [E] 0.87
COG2148Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid)Cell wall/membrane/envelope biogenesis [M] 0.87

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms80.00 %
UnclassifiedrootN/A20.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000955|JGI1027J12803_104791579All Organisms → cellular organisms → Bacteria1108Open in IMG/M
3300000956|JGI10216J12902_101537796All Organisms → cellular organisms → Bacteria2713Open in IMG/M
3300001686|C688J18823_10798593All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium599Open in IMG/M
3300004081|Ga0063454_101152691All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium637Open in IMG/M
3300004081|Ga0063454_101473018Not Available581Open in IMG/M
3300004114|Ga0062593_100348616All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1293Open in IMG/M
3300004114|Ga0062593_101253008All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria782Open in IMG/M
3300004463|Ga0063356_104353960All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria609Open in IMG/M
3300004479|Ga0062595_100391974All Organisms → cellular organisms → Bacteria990Open in IMG/M
3300004643|Ga0062591_100864999All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria843Open in IMG/M
3300005180|Ga0066685_10425634All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium922Open in IMG/M
3300005180|Ga0066685_10747641All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium667Open in IMG/M
3300005332|Ga0066388_100843795All Organisms → cellular organisms → Bacteria1502Open in IMG/M
3300005366|Ga0070659_100013115All Organisms → cellular organisms → Bacteria6163Open in IMG/M
3300005438|Ga0070701_10893692All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300005440|Ga0070705_100479734All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium939Open in IMG/M
3300005440|Ga0070705_100808863Not Available746Open in IMG/M
3300005468|Ga0070707_101041701All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium784Open in IMG/M
3300005535|Ga0070684_100061471All Organisms → cellular organisms → Bacteria3287Open in IMG/M
3300005536|Ga0070697_101014153All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria738Open in IMG/M
3300005539|Ga0068853_101394877Not Available678Open in IMG/M
3300005546|Ga0070696_101133462All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium659Open in IMG/M
3300005547|Ga0070693_100499241Not Available863Open in IMG/M
3300005561|Ga0066699_10561001All Organisms → cellular organisms → Bacteria819Open in IMG/M
3300005578|Ga0068854_101323571All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter → Patulibacter americanus649Open in IMG/M
3300005764|Ga0066903_102920348All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium927Open in IMG/M
3300005905|Ga0075269_10075865All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium614Open in IMG/M
3300006034|Ga0066656_10906093Not Available565Open in IMG/M
3300006046|Ga0066652_100444677All Organisms → cellular organisms → Bacteria1191Open in IMG/M
3300006059|Ga0075017_100832468Not Available714Open in IMG/M
3300006163|Ga0070715_10185336All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1047Open in IMG/M
3300006237|Ga0097621_101994036All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria554Open in IMG/M
3300007004|Ga0079218_12710751All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium591Open in IMG/M
3300009093|Ga0105240_10050863All Organisms → cellular organisms → Bacteria5220Open in IMG/M
3300009101|Ga0105247_10805465All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium717Open in IMG/M
3300009177|Ga0105248_12500927All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium588Open in IMG/M
3300009551|Ga0105238_12539232All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium548Open in IMG/M
3300009551|Ga0105238_12668981All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300009553|Ga0105249_10018969All Organisms → cellular organisms → Bacteria6132Open in IMG/M
3300009840|Ga0126313_11387896All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300010036|Ga0126305_10503889All Organisms → cellular organisms → Bacteria → Terrabacteria group807Open in IMG/M
3300010038|Ga0126315_10747447All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria641Open in IMG/M
3300010039|Ga0126309_10355941All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria863Open in IMG/M
3300010044|Ga0126310_10432943All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria945Open in IMG/M
3300010337|Ga0134062_10448253All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium640Open in IMG/M
3300010371|Ga0134125_10364071Not Available1604Open in IMG/M
3300010376|Ga0126381_102967326All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium674Open in IMG/M
3300011440|Ga0137433_1151516All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium746Open in IMG/M
3300012189|Ga0137388_10415800All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1246Open in IMG/M
3300012201|Ga0137365_10167509All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1647Open in IMG/M
3300012210|Ga0137378_10764596Not Available878Open in IMG/M
3300012212|Ga0150985_122602688Not Available569Open in IMG/M
3300012469|Ga0150984_119620392Not Available737Open in IMG/M
3300012509|Ga0157334_1081858All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium505Open in IMG/M
3300012685|Ga0137397_10094843All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2182Open in IMG/M
3300012913|Ga0157298_10132942All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium721Open in IMG/M
3300012938|Ga0162651_100063775Not Available598Open in IMG/M
3300012951|Ga0164300_11184713All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium505Open in IMG/M
3300012958|Ga0164299_10076169All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1666Open in IMG/M
3300012977|Ga0134087_10523537All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium601Open in IMG/M
3300012987|Ga0164307_11458366All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria578Open in IMG/M
3300014968|Ga0157379_11314704All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria698Open in IMG/M
3300015262|Ga0182007_10321922All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300015373|Ga0132257_102714746Not Available645Open in IMG/M
3300017965|Ga0190266_10038331All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1594Open in IMG/M
3300018000|Ga0184604_10193025All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria694Open in IMG/M
3300018066|Ga0184617_1009786All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1881Open in IMG/M
3300018076|Ga0184609_10289205All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium767Open in IMG/M
3300018078|Ga0184612_10041252All Organisms → cellular organisms → Bacteria2397Open in IMG/M
3300018466|Ga0190268_11715578All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium561Open in IMG/M
3300018468|Ga0066662_10952067All Organisms → cellular organisms → Bacteria847Open in IMG/M
3300018482|Ga0066669_11753939All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium572Open in IMG/M
3300018910|Ga0193598_1012864All Organisms → cellular organisms → Bacteria2383Open in IMG/M
3300018910|Ga0193598_1056403All Organisms → cellular organisms → Bacteria933Open in IMG/M
3300019767|Ga0190267_10853277All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium615Open in IMG/M
3300019875|Ga0193701_1069424All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria695Open in IMG/M
3300020001|Ga0193731_1034698Not Available1331Open in IMG/M
3300020016|Ga0193696_1009157All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2703Open in IMG/M
3300020082|Ga0206353_11026022All Organisms → cellular organisms → Bacteria → Terrabacteria group618Open in IMG/M
3300020082|Ga0206353_12048883Not Available1436Open in IMG/M
3300022467|Ga0224712_10644183All Organisms → cellular organisms → Bacteria → Terrabacteria group519Open in IMG/M
3300024187|Ga0247672_1025358Not Available953Open in IMG/M
3300025878|Ga0209584_10411819All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium522Open in IMG/M
3300025909|Ga0207705_10201876All Organisms → cellular organisms → Bacteria1506Open in IMG/M
3300025912|Ga0207707_10936496All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria714Open in IMG/M
3300025921|Ga0207652_10024124All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia5044Open in IMG/M
3300025935|Ga0207709_11824270All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria506Open in IMG/M
3300026121|Ga0207683_10001100All Organisms → cellular organisms → Bacteria24603Open in IMG/M
3300026142|Ga0207698_10848675Not Available918Open in IMG/M
3300026310|Ga0209239_1313668All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300026548|Ga0209161_10542429All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria518Open in IMG/M
3300027882|Ga0209590_10117576All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1612Open in IMG/M
3300027882|Ga0209590_10368160All Organisms → cellular organisms → Bacteria927Open in IMG/M
3300027909|Ga0209382_10337902All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1690Open in IMG/M
3300028041|Ga0247719_1129965All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300028716|Ga0307311_10002051All Organisms → cellular organisms → Bacteria4307Open in IMG/M
3300028718|Ga0307307_10125389All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria793Open in IMG/M
3300028787|Ga0307323_10078835Not Available1175Open in IMG/M
3300028802|Ga0307503_10031187All Organisms → cellular organisms → Bacteria1875Open in IMG/M
3300028802|Ga0307503_10103900All Organisms → cellular organisms → Bacteria1216Open in IMG/M
3300028814|Ga0307302_10466657All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300028819|Ga0307296_10482384All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria678Open in IMG/M
3300028828|Ga0307312_10665301All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria689Open in IMG/M
3300030336|Ga0247826_11752598All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300031092|Ga0308204_10221997All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300031226|Ga0307497_10431315All Organisms → cellular organisms → Bacteria636Open in IMG/M
3300031740|Ga0307468_100808409All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria800Open in IMG/M
3300031765|Ga0318554_10258101Not Available992Open in IMG/M
3300031938|Ga0308175_101087298Not Available886Open in IMG/M
3300032089|Ga0318525_10281397Not Available854Open in IMG/M
3300032174|Ga0307470_10033665All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2467Open in IMG/M
3300032829|Ga0335070_10581611Not Available1055Open in IMG/M
3300033407|Ga0214472_10382427All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1325Open in IMG/M
3300033803|Ga0314862_0067821Not Available793Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil19.13%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.96%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.96%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil5.22%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil4.35%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.48%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere2.61%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.61%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.61%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.61%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.61%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.61%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.61%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.74%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.74%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.74%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil1.74%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.74%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.74%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.87%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.87%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.87%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.87%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.87%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.87%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.87%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.87%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.87%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.87%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.87%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.87%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.87%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.87%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.87%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.87%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.87%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.87%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.87%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.87%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005905Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_105EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300011440Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2EnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012509Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6EnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012913Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2EnvironmentalOpen in IMG/M
3300012938Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015262Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaGHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300018910Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 18 hrs after wetting v1EnvironmentalOpen in IMG/M
3300019767Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 TEnvironmentalOpen in IMG/M
3300019875Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2EnvironmentalOpen in IMG/M
3300020001Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2EnvironmentalOpen in IMG/M
3300020016Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1EnvironmentalOpen in IMG/M
3300020082Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022467Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024187Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13EnvironmentalOpen in IMG/M
3300025878Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)EnvironmentalOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028041Soil microbial communities from hillslope of Landscape Evolution Observatory, University of Arizona, Oracle, AZ, United States - 4-1-E_DEnvironmentalOpen in IMG/M
3300028716Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198EnvironmentalOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031092Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031765Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300032089Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032829Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3EnvironmentalOpen in IMG/M
3300033407Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175EnvironmentalOpen in IMG/M
3300033803Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_10EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI1027J12803_10479157933300000955SoilVALTEIAPGLRRWTAWHEEWEEDVGCLAVDTDAGLVLIDPLDPPRGFGRPAHVVLTV
JGI10216J12902_10153779613300000956SoilMLRRWTAWHDEWQEDVGSVAVDTADGLVFIDPLDPPADLGRPDHVLVTVFWHGRGTAGLGAGR
C688J18823_1079859323300001686SoilVSQLELVAPGLRRWTAWHDEWKEPVGSVAVDTDRGIVLIDPLDPPRGLARPDHVLLTVYWHIRSAPELAA
Ga0063454_10115269113300004081SoilVSQLELVAPGLRRWTAWHDEWKEPVGSVAVDTDRGIVLIDPLDPPRGLARPDHV
Ga0063454_10147301823300004081SoilMLRRWTAYHDHWQEEVGCVAVETEDGLVFIDPLDPPADLGPPDHVLITVFWHDRSAAGAP
Ga0062593_10034861643300004114SoilMLQQVAPGLRRWTAHDHWEEDVGSLAVETSDGLVLVDPIDPPREVVEADHVLVTVCWHAR
Ga0062593_10125300813300004114SoilVALTAIAPGLRRWTAWHDEWEEDVGSLAVDTEDGLVLIDPLDPPSELPPPEHVLLT
Ga0063356_10435396023300004463Arabidopsis Thaliana RhizosphereMVEIAPGLRRWTAYHEHWEEQVGSLALETDDGLVLIDPIDPPRGLRSPDHVLLTVFWHGRST
Ga0062595_10039197413300004479SoilVAAEQIAPGLRRWTAWHAEWKQEVGSVAVQTSDGLVLIDPIDPPPELRKADHVLITVFWHGRATPDL
Ga0062591_10086499913300004643SoilMLQQVAPGLRRWTARHDHWEEDVGSLAVETSDGLVLVDPIDPPREVAGADHVLITVYWHARGAGEI
Ga0066685_1042563423300005180SoilMTRIAEVAPGLRRWTALHEEWREEVASLAVDTEDGLVLIDPIDPPRGMARPDHVLVT
Ga0066685_1074764113300005180SoilVASAEQIAPGLRRWTAWHAEWKQEVGSLAVQTPDGLVLIDPLDPPPELRRPDHVLLTVFWHGRSTPD
Ga0066388_10084379513300005332Tropical Forest SoilVEEIVPGLRRWTAWHDHWGEDVGCLSAQTADGLVLIDPLEPPSEVGKPEHVLVTVYWHGRGTS
Ga0070659_10001311593300005366Corn RhizosphereMQEIAPGLLRWTAWHDHWEEDVGALAVDTGDGLVFIDPIDPPVALGPPAHVLVTVYWHGRTSGELG
Ga0070701_1089369213300005438Corn, Switchgrass And Miscanthus RhizosphereVEQIAPGIRRWTSWHDHWEEDVGSLAVDTPDGLVLIDPLDPPADLGKPAHVLVTVYWHARGTAGLKAPTWA
Ga0070705_10047973423300005440Corn, Switchgrass And Miscanthus RhizosphereMTRIADVAPGLRRWTALHEEWREEVASLAVDTEDGLVLIDPIDPPRGMVRPDHVLLTVFWHGR
Ga0070705_10080886323300005440Corn, Switchgrass And Miscanthus RhizosphereMALTEIAPGLRRWTAWHEEWEEDVGCLAVDTDAGLVLIDPLDPPNEVSRPDHVLITIHWHARSAQAPHVW
Ga0070707_10104170113300005468Corn, Switchgrass And Miscanthus RhizosphereMLRRWTAWHEEWGEEVGSIAVETTDGLVFIDPLDPPADLGAPDHVLVTVFWHGRGTSALGATQV
Ga0070684_10006147143300005535Corn RhizosphereVALTEIAPGLRRWTVRHDEWLEEVGCLAVDTDDGLVLIDPLDPPRGLRRPDHVLLTV
Ga0070697_10101415313300005536Corn, Switchgrass And Miscanthus RhizosphereVEEIAPGLRRWTAWHGEWQEQVGSVAVETDDGLVLIDPLDVPPELRGADHVLVAVYWH
Ga0068853_10139487723300005539Corn RhizosphereVLRRWTAYHSHWEENVGSVAVDTDDGLVFIDPLDPPADLGTPDHVLVTIYWHDRSTK
Ga0070696_10113346223300005546Corn, Switchgrass And Miscanthus RhizosphereMGSAVEIAPGLHRWTAWHEEWREDVGSVAVETGDGLVFIDPLAPPPDLGAPAHVLLTVYWHGRAAAA
Ga0070693_10049924123300005547Corn, Switchgrass And Miscanthus RhizosphereVELTEVAPGLRRWTAWHDEWEEDVGCLAVDTEDGLVQIDPLDPPSELPPPEHVLLTIHWHARSAEAPHVWAH
Ga0066699_1056100133300005561SoilVSTLTEVAPGLRRWTTWHDEWRQEVGSLALQTGGGLALIDPINPPPEIRRPEHILLTVAWHARTAGK
Ga0068854_10132357123300005578Corn RhizosphereVEEIAPGLRRWTAYHDHWEEEVGSLALESDDGLILIDPIDPPRGLRRPDHVLLTVYWHHRSTGDL
Ga0066903_10292034813300005764Tropical Forest SoilMGLTEVAPGLRRWTAWHEEWQENVGCLAVDTDNGLVLIDPLDPPRGVRRPKHVLLTLFFHARSTKAPHVWAHA
Ga0075269_1007586523300005905Rice Paddy SoilVALTEVAPGLRRWTAWHDEWREDVGCLAVDTDDGLVLIDPLDPPRGVRRPAHVLLTVFFHARSAK
Ga0066656_1090609323300006034SoilMPLTEVAPGLRRWTAWHDEWQEEVGCLAVDTADGLVLIEPLDPPRGVRRPKHVLLTVFFHAR
Ga0066652_10044467713300006046SoilVQLTEVAPGLRRWKAWHEEWQEDVGCLAVDTDDGLVLIDPLDPPRGLRRPQHVLLT
Ga0075017_10083246823300006059WatershedsVALTEVAPGLRRWTAWHDEWQSDVGCLAVDTDDGLVLVDPLDPPSELSKPEHVLLTIHWHSRSAKAP
Ga0070715_1018533633300006163Corn, Switchgrass And Miscanthus RhizosphereMQEIAPGLLRWTAWHDHWEEDVGALAVETGDGLVFIDPIDPPVALGPPAHVLVTVYWHG
Ga0097621_10199403623300006237Miscanthus RhizosphereMLEIAPGLRRWTARHEDWEEDVGSLAVETSDGLVLIDPIDPPRELAAADHILVTV
Ga0079218_1271075113300007004Agricultural SoilVEELAPGLRRWTSWHEHWEEDVSSVAVETDDGLVLIDPNEPPAEVARPAHVLLTVYWHARSTSALGAPRVWAP
Ga0105240_1005086353300009093Corn RhizosphereMRRWTSYHDHWEEDVGCVAVETDDGLVFIDPLDPPEDLPRPEHVLLTVYW
Ga0105247_1080546513300009101Switchgrass RhizosphereVEQIAPGIRRWTSWHDHWEEDVGSLAVDTPDGLVLIDPLDPPADLGKPAHVLVTVYWHARGTAGLKAPTWAPSRSLRPL
Ga0105248_1250092713300009177Switchgrass RhizosphereVALTEIAPGLRRWTAWHEEWEEDVGCLAVDTDAGLVLIDPLDPPRGLGRPAHVVLTVHWHARSTK
Ga0105238_1253923223300009551Corn RhizosphereVALTEIAPGLRRWTVRHEEWEEDVGCLALDTEEGLVLIDPLDPPNEVSRPDHVLITIHWHARSAQAPHV*
Ga0105238_1266898113300009551Corn RhizosphereVALVEIAPGLRRWTAWHEEWEEDVGSLAVDTEGGLVLIDPLDPPAEVGDPAHVLLTIHWQAR*
Ga0105249_1001896983300009553Switchgrass RhizosphereMQEIAPGLHRWTAWHDHWEEDVGALAVETGDGLVFIDPIDPPVALGPPAHVLVTVYWHGRTSGELGASDVW
Ga0126313_1138789623300009840Serpentine SoilVTLVELAPGLRRWTAWHDHWEEDVAALAVDTEDGLVLIDPIEPRPELRRADHVLLTVYWHARAAAGLKGHTWAP
Ga0126305_1050388933300010036Serpentine SoilMVEVAAGLRRWTAYHEHWEEQVGSLALETDDGLVLIDPIDPPRGLRRPDHVVLTVFWHGRSTSDLNAKRVWA
Ga0126315_1074744713300010038Serpentine SoilVQEIAPGLRRWTAWHDHWEENVGSVAVETGDGLVLIDPLDPPRDLCEPDHVLVTVYWHGR
Ga0126309_1035594113300010039Serpentine SoilLEEIAPRLRRWTAWHEEWEEDVGSLALETADGLILIDPLDPPADVRRPDHVLVTVF
Ga0126310_1043294313300010044Serpentine SoilVEEIAPRLRRWTAWHEEWEQDVGSLALETSDGLILIDPLDPPAEVRRPDHVLVTVFWHGR
Ga0134062_1044825313300010337Grasslands SoilVAAEQIAPGLRRWTAWHAEWKQEVGSLAVQTSGGLVLIDPIDPPPEVRRPDHVLITVFWHGRS
Ga0134125_1036407113300010371Terrestrial SoilMALTEIAPGLRRWTAWHEEWEEDVGCLAVDTDAGLVLIDPLDPPRGLGRPAHVLLTVHWHARSTKARQVWAHRRA
Ga0126381_10296732613300010376Tropical Forest SoilMALTEIAPGLRRWTAWHEEWQSDVGCLAVDTDDGLVLIDPLDPPSELPEPEHVLLTIYWHSRSTEAPHVWAHER
Ga0137433_115151623300011440SoilMTALQQIAPGLRRWTSWHDHWEQQVGSVAVDTSDGVVLIDPLDPPADLPSPKHVLVTVYW
Ga0137388_1041580013300012189Vadose Zone SoilMTRIADVAPGLRRWTALHEEWREEVASLAVETEDGLVLIDPIDPPRGMARPDHVLLTVFWHGRSAAELGTPH
Ga0137365_1016750933300012201Vadose Zone SoilMTRIADVAPGLRRWTALHEEWREEVASLAVDTEDGLVLIDPIDPPRGMARPDHVLLTVFWHGRSAGELGTP
Ga0137378_1076459613300012210Vadose Zone SoilMPLVEVASGLRRWTSWHEEWQEDVGCLAVDTDDGLVLIDPLDPPRGLRRPDHVLLTVHWHARSTGAPQVWAH
Ga0150985_12260268823300012212Avena Fatua RhizosphereMLRRWTAYHDHWQEEVGCVAVGTGDGLVFIDPLEPPPDLGQPDHLLITVFWHD
Ga0150984_11962039213300012469Avena Fatua RhizosphereVPLAEIAPGLRRWTAWHDEWEEDVGCLAVDTEDGFVLIDPLDPPRGLGRPAHVLLTVHWHARSTKEH
Ga0157334_108185823300012509SoilVELAPGLRRWTAWHDEWKQEVASLALETDDGLVLIDPLQPPPELRRADHVLFTVYWHDR
Ga0137397_1009484313300012685Vadose Zone SoilMTHIADVAPGLRRWTALHEEWREEVASLAVETEDGLVLIDPIDPPRGMARPDHVLLTVFWHGRSAAELGTPQVW
Ga0157298_1013294223300012913SoilMEEIAPGLRRWTSWHDHWEEDVGSLAVETEDGLVLIDPNATPKELGRPAHVLLTVYWHARGTK
Ga0162651_10006377513300012938SoilMDEIAPALSRWTAWHDHWEEEVGSLALETDDGLILIDPLDPPPALRRPDHVVLTVFWHGRSTSQLRSKRVWAP
Ga0164300_1118471313300012951SoilMAAIQEIAPGLRRWTSRHEEWNEQVGSLAVDTDDGLLLVDPLDPPRGLRRPEHVVVT
Ga0164299_1007616913300012958SoilMQEIAPGLHRWTAWHDHWEEDVGALAVEPGDGLVFIGPIDPPVELGPPAHVLLTVDWHGRTSGELVAGDVW
Ga0134087_1052353713300012977Grasslands SoilVQLTEVAPGLRRWTAWHDEWKEDVGCLAVDTDDGLVLIDPLDPPRGLRRPQHVLLTVHWH
Ga0164307_1145836613300012987SoilMLQQVAPGLRRWTARHDHWEEDVGSLAVETSDGLVLIDPIDPPREIARADHVLVTVYWHARSA
Ga0157379_1131470423300014968Switchgrass RhizosphereMLEIAPGLRRWTARHEDWEEDVGSLAVETSDGLVLIDPIDPPRELAAADHVLVTVYWHGRSTGELGAKRV
Ga0182007_1032192213300015262RhizosphereVSLTEIAPGLRRWTAWHDEWQEDVGCLAVETDDGLVLIDPLDPPRGLGRPEHVLITVHWHARSTKA
Ga0132257_10271474623300015373Arabidopsis RhizosphereMLRRWTAYHDHWEEQVGSVAVGTADGLVFIDPLEPPAELGTPEHVLLTIYWHDRDSAKTG
Ga0190266_1003833123300017965SoilVTVQEIAPGLRRWTAWHDHWEEQVGSVAVDTADGLVLIDPLDPPADLPSPKHVLLTLYYHALAAAGLKAGVWAPARS
Ga0184604_1019302513300018000Groundwater SedimentMLQQVAPGLRRWTARHDHWEEDVGSLAVETSDGLVLIDPIDPPREVAKADHVLVTVYWHARSAG
Ga0184617_100978633300018066Groundwater SedimentMQEIAPGLRRWTAWHDHWEEDVGALAVETGDGLVFIDPIDPPVELGPPAHVLVTVYWHGRTSGEL
Ga0184609_1028920523300018076Groundwater SedimentVTMQEIAPGLRRWTAWHDHWEEQVGSVAVDTADGLVLIDPLDPPAELPSPKHVLLTLYYHARAAAGLKARVWAPA
Ga0184612_1004125213300018078Groundwater SedimentMQEIAPGLRRWTAWHDHWEEQVGSVAVDTPDGLVLIDPLDPPPDLSRPKHVLLTVYWHARGAGGLKARVWAPSRSQ
Ga0190268_1171557813300018466SoilMQEIVPGLRRWTSWHDHWEEDVGSVAVDTPDGLALIDPLDPPPELGRAAHVLVTVYWHARGTAGLKARTWAPSRSLRPLAN
Ga0066662_1095206723300018468Grasslands SoilMTALEEIAPGLHRWTARHEEWNEDVGSLAVETDDGLVLIDPLDAPRALRTPAHVP
Ga0066669_1175393913300018482Grasslands SoilMDDLARGLRRWSAWHEEWQQEVASLAVSTTDGLVLIDPLDPPPEVRNPRHVLITVFFHARSTGQLGAP
Ga0193598_101286413300018910SoilVETLAPGLRRWTARHESWKEEVASLAVDADDGLVLIDPIEPPPEVAHPEHVLLTVFFHE
Ga0193598_105640313300018910SoilVIETLAPGLRRWTAWREGWNEHVGCVAVDTEGLVLIDPLDPPEEVSAPEHVIVTVHWHDRSVA
Ga0190267_1085327713300019767SoilLTAMQEIAPGLRRWTAWHDHWEEDVGSVAVDTADGLVLIDPLDPPAELARPAHVLVTVYWHARATAALQ
Ga0193701_106942413300019875SoilMLQQVAPGLRRWTAPHDHWEEDVGSLAVETSDGLVLIDPIAPPREVAKADHVLVTVYW
Ga0193731_103469813300020001SoilMGAVVEIAPGLRRWTAWHEEWREDVGSVAVETGEGLVYIDPLAAPPELGTPAHVLVTVYWHGRAA
Ga0193696_100915713300020016SoilMQEIAPGLRRWTAWHDHWEEDVGALAVETGDGLVFIDPIEPPSELGPPAHVLVTVYWHGRTSGELGGSDVWASTR
Ga0206353_1102602223300020082Corn, Switchgrass And Miscanthus RhizosphereMRRWTSRHEEWAEDVGSLAVETAEGLVFVDPLEPPADLGAPDHVLLTIYWHGR
Ga0206353_1204888323300020082Corn, Switchgrass And Miscanthus RhizosphereVALTEIAPGLRRWTVRHEEWEEDVGCLALDTEEGLVLIDPLDPPNEVSRPDHVLITIH
Ga0224712_1064418323300022467Corn, Switchgrass And Miscanthus RhizosphereMRRWTSYHDHWEEDVGCVAVETDDGLVFIDPLDPPEDLPRPEHVLLTVYWPDRSARD
Ga0247672_102535823300024187SoilMAVTEVAPGLRRWAAWHEEWGENVGCLAVDTDDGLVLIDPLDPPRGLRRPAHVLLTVFFH
Ga0209584_1041181913300025878Arctic Peat SoilMQVPAQIAPGLRRWSARHDEWNEHVASLALDTDDGLVLIDPIDPPRSLGVPAHVLLTVYWHARSAAALGSARAS
Ga0207705_1020187633300025909Corn RhizosphereMRRWTSYHDHWEEDVGCVAVETDDGLVFIDPLDPPEDLPRPEHVLLTVYWH
Ga0207707_1093649623300025912Corn RhizosphereMQEIAPGLLRWTAWHDHWEEDVGALAVETGDGLVFIDPIDPPVALGPPAHVLVTVYWHGRTSGELGASDVWAST
Ga0207652_1002412413300025921Corn RhizosphereVELTEVAPGLRRWTAWHDEWEEDVGCLAVDTEDGLVQIDPLDPPSELPPPEHVLLTI
Ga0207709_1152102223300025935Miscanthus RhizosphereMGSATEIAPGLRRWTARHEEWNEEVGSVAVDTRDGLVLIDPIAPPAGLGRPDHVLVTVYWHGRDAGELGASAVWAPARSA
Ga0207709_1182427023300025935Miscanthus RhizosphereMQEIAPGLHRWTAWHDHWEEDVGALAVETDDGLVFIDPIDPPVELGPPEHVLVTVYWHGR
Ga0207683_10001100323300026121Miscanthus RhizosphereMQEIAPGLLRWTAWHDHWEEDVGALAVETGDGLVFIDPIDPPVALGPPAHVLVTVYWHGRPSGELGA
Ga0207698_1084867513300026142Corn RhizosphereVALTEIAPGLRRWTVRHEEWEEDVGCLALDTEEGLVLIDPLDPPNEVSRPDHVLITIHWHAR
Ga0209239_131366823300026310Grasslands SoilVQLTEVAPGLRRWTAWHDEWQEDVGCLVVDTDDGLVLIDPLDPPRGLRRPQHVLLTVHWHVRSTKARHVW
Ga0209161_1054242923300026548SoilMTLVSVAPGLRRWTAWHDEWREAVGSVAVETDDGLVLIDPLDPPRGLARPDHVLLTVYWH
Ga0209590_1011757633300027882Vadose Zone SoilMTEIAPGLRRWTAWHDHWEEDVGSLAVETSDGLVFIDPIDPPGRLGKPDHVLVTVYWHGRTTGE
Ga0209590_1036816043300027882Vadose Zone SoilVALTEIAPGLRRWTTWHEEWRQDVGSLAVETKDGLVLIDPLAPPPELRRATHILFT
Ga0209382_1033790243300027909Populus RhizosphereMDELAPGLRRWTAWHEEWEDEVGSLAVDTSDGLVLIDPIDPPPELRSPAHVLITVFWHGRTTSDLDAA
Ga0247719_112996513300028041SoilMEEVAPGLRRWTARHEEWGEEVGCLALESADGLVLVDPLDPPEEVRGARHVLLTVFWHHRALPGLD
Ga0307311_1000205173300028716SoilMQEIAPGLHRWTAWHDHWEEDVGAVAVETGDGLVFIDPIEPPVELGPPAHVLVTVYW
Ga0307307_1012538923300028718SoilMLQQVAPGLRRWTAPHDHWEEDVGSLAVETSDGLVLIDPIVPPREVAKADHVLVTVYWHA
Ga0307323_1007883513300028787SoilMGTAVEIAPGLRRWTAWHEEWREDVGSVAVETGEGLVFIDPLAAPSELGTPEHVLLTVYWHG
Ga0307503_1003118723300028802SoilVGSRSLPNTQEIAPGLRRWTAWHDHWEEQVGSVAVDTADGLVLIDPLDPPADLPSPKHVLLTLYFHARTAAGLKA
Ga0307503_1010390013300028802SoilVEQIAPGLRRWTSWHDHWEEDVGSLAVETPDGLVLIDPLDPPAELRKPAHVLVTVYWHARGTADLK
Ga0307302_1046665723300028814SoilVGSRSLPNTQEIAPGLRRWTAWHDHWEEQVGSVAVDTADGLVLIDPLDPPADLPSPKH
Ga0307296_1048238413300028819SoilMLQQVAPGLRRWTAPHDHWEEDVGSVAVETSDGLVLIDPIAPPREVAKADHVLVTVYWH
Ga0307312_1066530113300028828SoilMLQVAPGLRRWTAPHDHWEEDVGSLAVETSDGLVLIDPIDPPREIARADHVLVTVYWHARSTGELGA
Ga0247826_1175259813300030336SoilVEQIALGLRRWTSWHDHWEEDVGSLAVETPDGLVLIDPLAPPAELGKPAHVLVTVYWHARGTADLKARTWA
Ga0308204_1022199713300031092SoilVDELAPGLRRWTAWHDHWEEEVGALAVDTDDGLVLIDPIDPPEGVREPAHVLVTV
Ga0307497_1043131513300031226SoilVEQIAPGLRRWTSWHDHWEEDVGSLAVETPDGLVLIDPLDPPAELRKPAHVLVTVYWHARGTADLKARTWAPSRS
Ga0307468_10080840913300031740Hardwood Forest SoilMTPMQEIAPGLHRWTAWHDHWEEDVGAVAVETGDGLVLIDPIEPPAELGPPAHVLVTVYW
Ga0318554_1025810123300031765SoilMSLVEVAPGLHRWTVRHEEWQEDVGCLAVDTDDGLVLIDPLDPPSELPPPEHVLLTIH
Ga0308175_10108729823300031938SoilVALTEIAPGLRRWTAWHDEWEEDVGSLAVDTEDGLVLIDPLDPPSELPPPEHVLLTIHWHARSA
Ga0318525_1028139723300032089SoilMSLVEVAPGLHRWTVRHEEWQEDVGCLAVDTDDGLVLIDPLDPPSELPPPELVRPDVW
Ga0307470_1003366513300032174Hardwood Forest SoilMQEIAPGLHRWTAWHDHWEEDVGALAVETGDGLVFIDPIDPPVELGPPAHVLVTVYWHGRTSGELGASDLWASTR
Ga0335070_1058161123300032829SoilVPLTEIAPGLRRWTAWHEEWREDVGCVAVETDDGLVLIDPLDPPRGLGRPDHALVTVFFHARSTKA
Ga0214472_1038242733300033407SoilMEQIAAGLRRWTARHEEWNEDVGSLALETDDGLMLFDPIDPPRGVRGAAHVALTVCWHYR
Ga0314862_0067821_617_7933300033803PeatlandVPLTEVAPGLRRWTAWHEEWHEDVGCLAVDTGDGLVLIDPLDPPRELRRPEHVLLTIQW

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Bioinformatics & Integrated Biology Lab
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Biomedical Sciences Research Center "Alexander Fleming"
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