Metagenome Family F080637

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080637
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	83 residues
Representative Sequence	MTTVAQPTIKAKYATVYDAPATIAKVNGQLFVIYADGRIEDFEVEMAPFTVVLGDVQTAETQAMWDRVAGGAAAIACSRTEGRR
Number of Associated Samples	69
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	88.70 %
% of genes near scaffold ends (potentially truncated)	26.96 %
% of genes from short scaffolds (< 2000 bps)	86.09 %
Associated GOLD sequencing projects	59
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (86.957 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (28.696 % of family members)
Environment Ontology (ENVO)	Unclassified (28.696 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.087 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.54% β-sheet: 21.43% Coil/Unstructured: 58.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF01381	HTH_3	23.48
PF13560	HTH_31	19.13
PF12844	HTH_19	10.43
PF04434	SWIM	4.35
PF13481	AAA_25	0.87
PF01807	zf-CHC2	0.87
PF05973	Gp49	0.87
PF13730	HTH_36	0.87
PF09250	Prim-Pol	0.87
PF05869	Dam	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG4279	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	4.35
COG4715	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	4.35
COG5431	Predicted nucleic acid-binding protein, contains SWIM-type Zn-finger domain	General function prediction only [R]	4.35
COG0358	DNA primase (bacterial type)	Replication, recombination and repair [L]	0.87
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	0.87
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.96 %
All Organisms	root	All Organisms	13.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.96 %
cellular organisms	root	All Organisms → cellular organisms	12.17 %
Viruses	superkingdom	All Organisms → Viruses	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.96 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	12.17 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.96 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.87 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.96 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.87 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.96 %
Candidatus Melainabacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria	0.87 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.87 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.96 %
Candidatus Obscuribacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → Candidatus Obscuribacterales	0.87 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.87 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.96 %
Candidatus Obscuribacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → Candidatus Obscuribacterales → Candidatus Obscuribacter	0.87 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.87 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.96 %
Candidatus Obscuribacter phosphatis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → Candidatus Obscuribacterales → Candidatus Obscuribacter → Candidatus Obscuribacter phosphatis	0.87 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.87 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.96 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.87 %
Candidatus Obscuribacter phosphatis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → Candidatus Obscuribacterales → Candidatus Obscuribacter → Candidatus Obscuribacter phosphatis	0.87 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_104917797	Not Available	768	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105076535	Not Available	891	Open in IMG/M
3300000858\|JGI10213J12805_10058342	Not Available	619	Open in IMG/M
3300000955\|JGI1027J12803_103995409	Not Available	886	Open in IMG/M
3300000955\|JGI1027J12803_107941467	Not Available	1076	Open in IMG/M
3300000955\|JGI1027J12803_109094657	Not Available	730	Open in IMG/M
3300001431\|F14TB_101316633	Not Available	1028	Open in IMG/M
3300004633\|Ga0066395_10637534	Not Available	627	Open in IMG/M
3300005294\|Ga0065705_10233875	Not Available	1261	Open in IMG/M
3300005332\|Ga0066388_101409849	Not Available	1211	Open in IMG/M
3300005332\|Ga0066388_103335955	Not Available	820	Open in IMG/M
3300005332\|Ga0066388_104042370	Not Available	748	Open in IMG/M
3300005332\|Ga0066388_104669051	Not Available	697	Open in IMG/M
3300005332\|Ga0066388_104733970	Not Available	692	Open in IMG/M
3300005445\|Ga0070708_100161928	Not Available	2085	Open in IMG/M
3300005555\|Ga0066692_10567449	Not Available	716	Open in IMG/M
3300005577\|Ga0068857_100094914	All Organisms → cellular organisms → Bacteria	2671	Open in IMG/M
3300005764\|Ga0066903_100009768	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	9069	Open in IMG/M
3300005764\|Ga0066903_100162876	All Organisms → cellular organisms → Bacteria	3239	Open in IMG/M
3300005764\|Ga0066903_100706077	Not Available	1779	Open in IMG/M
3300005764\|Ga0066903_100784907	Not Available	1700	Open in IMG/M
3300005764\|Ga0066903_101420666	Not Available	1305	Open in IMG/M
3300005764\|Ga0066903_104595221	Not Available	735	Open in IMG/M
3300005764\|Ga0066903_104911854	Not Available	710	Open in IMG/M
3300005764\|Ga0066903_105566332	Not Available	663	Open in IMG/M
3300005764\|Ga0066903_107194111	Not Available	576	Open in IMG/M
3300005937\|Ga0081455_10004901	All Organisms → cellular organisms → Bacteria	14836	Open in IMG/M
3300006844\|Ga0075428_100042147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5020	Open in IMG/M
3300006844\|Ga0075428_100052091	Not Available	4487	Open in IMG/M
3300006844\|Ga0075428_100221057	Not Available	2045	Open in IMG/M
3300006844\|Ga0075428_100299200	Not Available	1730	Open in IMG/M
3300006844\|Ga0075428_101017527	Not Available	877	Open in IMG/M
3300006844\|Ga0075428_102483549	Not Available	531	Open in IMG/M
3300006844\|Ga0075428_102703509	Not Available	506	Open in IMG/M
3300006845\|Ga0075421_100044574	Not Available	5617	Open in IMG/M
3300006845\|Ga0075421_100268109	All Organisms → cellular organisms → Bacteria	2088	Open in IMG/M
3300006846\|Ga0075430_100972979	Not Available	699	Open in IMG/M
3300006846\|Ga0075430_101524460	Not Available	549	Open in IMG/M
3300006847\|Ga0075431_100093890	All Organisms → cellular organisms → Bacteria	3096	Open in IMG/M
3300006847\|Ga0075431_100418623	All Organisms → cellular organisms → Bacteria	1339	Open in IMG/M
3300006847\|Ga0075431_100690803	Not Available	999	Open in IMG/M
3300006853\|Ga0075420_100751581	Not Available	840	Open in IMG/M
3300009090\|Ga0099827_10384998	Not Available	1197	Open in IMG/M
3300009094\|Ga0111539_11634617	Not Available	747	Open in IMG/M
3300009100\|Ga0075418_10310270	Not Available	1682	Open in IMG/M
3300009100\|Ga0075418_10480641	Not Available	1332	Open in IMG/M
3300009100\|Ga0075418_10846908	Not Available	988	Open in IMG/M
3300009100\|Ga0075418_11325576	Not Available	780	Open in IMG/M
3300009100\|Ga0075418_11929867	Not Available	643	Open in IMG/M
3300009100\|Ga0075418_12366011	Not Available	580	Open in IMG/M
3300009147\|Ga0114129_10050490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → Candidatus Obscuribacterales → Candidatus Obscuribacter → Candidatus Obscuribacter phosphatis	5842	Open in IMG/M
3300009147\|Ga0114129_10862247	Not Available	1150	Open in IMG/M
3300009147\|Ga0114129_10936332	Not Available	1095	Open in IMG/M
3300009147\|Ga0114129_11519648	Not Available	822	Open in IMG/M
3300009156\|Ga0111538_11721122	Not Available	790	Open in IMG/M
3300009162\|Ga0075423_10599833	Not Available	1160	Open in IMG/M
3300010360\|Ga0126372_11403177	Not Available	731	Open in IMG/M
3300010362\|Ga0126377_13203991	Not Available	529	Open in IMG/M
3300010366\|Ga0126379_13150928	Not Available	552	Open in IMG/M
3300010398\|Ga0126383_11427823	Not Available	782	Open in IMG/M
3300012199\|Ga0137383_10258427	Not Available	1276	Open in IMG/M
3300012206\|Ga0137380_10385419	Not Available	1246	Open in IMG/M
3300012209\|Ga0137379_10555346	Not Available	1056	Open in IMG/M
3300012210\|Ga0137378_10435536	Not Available	1215	Open in IMG/M
3300012211\|Ga0137377_10046695	Not Available	3989	Open in IMG/M
3300012212\|Ga0150985_101384132	Not Available	910	Open in IMG/M
3300012212\|Ga0150985_116358358	Not Available	539	Open in IMG/M
3300012349\|Ga0137387_10569356	Not Available	822	Open in IMG/M
3300012351\|Ga0137386_10281963	Not Available	1196	Open in IMG/M
3300012359\|Ga0137385_10275594	All Organisms → cellular organisms → Bacteria	1452	Open in IMG/M
3300012469\|Ga0150984_108909221	Not Available	578	Open in IMG/M
3300012971\|Ga0126369_10003603	All Organisms → cellular organisms → Bacteria	11191	Open in IMG/M
3300012971\|Ga0126369_11011579	Not Available	919	Open in IMG/M
3300015371\|Ga0132258_12815989	Not Available	1211	Open in IMG/M
3300016270\|Ga0182036_10323708	Not Available	1180	Open in IMG/M
3300016270\|Ga0182036_11556331	Not Available	556	Open in IMG/M
3300016294\|Ga0182041_11164853	Not Available	702	Open in IMG/M
3300016319\|Ga0182033_11668599	Not Available	577	Open in IMG/M
3300016387\|Ga0182040_10596460	Not Available	894	Open in IMG/M
3300016404\|Ga0182037_10640566	Not Available	905	Open in IMG/M
3300016404\|Ga0182037_10744333	Not Available	842	Open in IMG/M
3300016422\|Ga0182039_10197446	Not Available	1602	Open in IMG/M
3300016445\|Ga0182038_11803074	Not Available	552	Open in IMG/M
3300026116\|Ga0207674_10113985	All Organisms → cellular organisms → Bacteria	2676	Open in IMG/M
3300027880\|Ga0209481_10347318	Not Available	756	Open in IMG/M
3300027882\|Ga0209590_10400491	Not Available	886	Open in IMG/M
3300027907\|Ga0207428_11269015	Not Available	511	Open in IMG/M
3300027909\|Ga0209382_10035131	Not Available	6029	Open in IMG/M
3300027909\|Ga0209382_10307685	All Organisms → cellular organisms → Bacteria	1785	Open in IMG/M
3300027909\|Ga0209382_11362085	Not Available	715	Open in IMG/M
3300031543\|Ga0318516_10448513	Not Available	742	Open in IMG/M
3300031545\|Ga0318541_10606230	Not Available	612	Open in IMG/M
3300031561\|Ga0318528_10686710	Not Available	548	Open in IMG/M
3300031679\|Ga0318561_10791331	Not Available	521	Open in IMG/M
3300031681\|Ga0318572_10278562	Not Available	986	Open in IMG/M
3300031719\|Ga0306917_10611408	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	857	Open in IMG/M
3300031747\|Ga0318502_10581118	Not Available	674	Open in IMG/M
3300031879\|Ga0306919_10289284	Not Available	1241	Open in IMG/M
3300031890\|Ga0306925_10401052	Not Available	1470	Open in IMG/M
3300031890\|Ga0306925_10417876	Not Available	1436	Open in IMG/M
3300031890\|Ga0306925_10889046	Not Available	917	Open in IMG/M
3300031890\|Ga0306925_10906390	Not Available	906	Open in IMG/M
3300031908\|Ga0310900_10354529	Not Available	1099	Open in IMG/M
3300031910\|Ga0306923_10362662	Not Available	1652	Open in IMG/M
3300031912\|Ga0306921_10274931	Not Available	1973	Open in IMG/M
3300031912\|Ga0306921_12068987	Not Available	604	Open in IMG/M
3300031947\|Ga0310909_10673001	Not Available	861	Open in IMG/M
3300032001\|Ga0306922_10386059	Not Available	1500	Open in IMG/M
3300032063\|Ga0318504_10372860	Not Available	679	Open in IMG/M
3300032076\|Ga0306924_11179537	Not Available	830	Open in IMG/M
3300032076\|Ga0306924_12270473	Not Available	551	Open in IMG/M
3300032261\|Ga0306920_100874561	Not Available	1315	Open in IMG/M
3300032261\|Ga0306920_101331257	All Organisms → Viruses → Predicted Viral	1032	Open in IMG/M
3300032261\|Ga0306920_102110610	Not Available	786	Open in IMG/M
3300033289\|Ga0310914_11207494	Not Available	658	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	65.22%
Host-Associated	Host-Associated	34.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.22%
Plants	Host-Associated → Plants	34.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.22%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.57%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.22%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	28.70%
Loam	Environmental → Terrestrial → Soil → Loam	14.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.61%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.87%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	28.70%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.04%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.61%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.87%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	28.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.04%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.22%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.74%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.87%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.87%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1049177972	3300000364	Soil	MQTVTQPTIRAKYATVYDEPVRIAKVHDVLYVLYDDGRIVHFEIEMAPFTTVLGDCQTADVQAWVDTVLQHGYAAIACSRNN*
INPhiseqgaiiFebDRAFT_1050765352	3300000364	Soil	MATAIVTQTPIKAKFATVYDVPCRIASVNQVLYVIYEDGRIEDFSIEMAPFVVVLGDVTTAECQAMWDRINGGAARIACSRLSEVA*
JGI10213J12805_100583421	3300000858	Soil	MAATIAQPTIKAKYATVYDKPATIAKVGGAFYVIYDDGRIEDFALEMAPFTVVLGDVALSETAAMWDRIAGGAAKVACSRTAGRQ*
JGI1027J12803_1039954092	3300000955	Soil	MATLPQPTIKAKYATVYDAPARIAKVNQALYVLYDDGRIEDFTIEMAPFVVVLGDVSISELQAMWDRVAGGPVNICLGRAQEVA*
JGI1027J12803_1079414674	3300000955	Soil	MRTVAQPTIKAKYATVYDEPARIAKVNQALYVIYDDGRIEDFDVEMAPFTVVLGDVLISELQAMWDRVAGGPVGLCLNRTQEV
JGI1027J12803_1090946572	3300000955	Soil	AKYATVYDEPVRIAKVHDVLYVLYDDGRIVHFEIEMAPFTTVLGDCQTADVQAWVDTVLQHGYAAIACSRNN*
F14TB_1013166333	3300001431	Soil	PTIKAKYATVYDVPARIAKVNQTLYVIYDDGRVEDFEVEMAPFTVVLGDVAVSELQAMWDRVAGGPVGICLSRKMEV*
Ga0066395_106375341	3300004633	Tropical Forest Soil	KAKYATVYDEPCTIAKVGQGLYVIYDDGGIEDFEVAMAPFTVVLGDVQTAETAAMWDRIAGGYARQACERLQGVR*
Ga0065705_102338753	3300005294	Switchgrass Rhizosphere	MGTLPQPTIKAKYATVYDEPARIAKVNQVLYVIYDDGRIEDFSIEMAPFTVVLGDVAISELQAMWDRVAGGPVGICLSRKMAVA*
Ga0066388_1014098492	3300005332	Tropical Forest Soil	MQTIPQPTIRAKYATVYDVPARIAKVHDVLYVIYDDGRIEPFEVEMAPFTVVLGDVATAETQAMWDRVAGGCAAIACGRKQEVA*
Ga0066388_1033359551	3300005332	Tropical Forest Soil	MTTVAQPTIKAKYATVYDAPATIAKVNGQLFVIYADGRIEDFEVEMAPFTVVLGDVQTAETQAMWDRVAGGAAAIACSRTEGRR*
Ga0066388_1040423701	3300005332	Tropical Forest Soil	MQTIPQTTIRAKYAEVYGEAATIAKVNGVLYVIYDDGRIEDFAIEMAPFVVVLGDVSLAENAAMWDRVAGGFAAIACSRHEGRQ*
Ga0066388_1046690511	3300005332	Tropical Forest Soil	MQTIPQPTIRAKFACVYDEPARIVKVNGALYVIYDDGRIEDFEVEMAPYVVVLGDCQTADVQQMWDRIAGGFAAIACGRQEGRL*
Ga0066388_1047339702	3300005332	Tropical Forest Soil	MATLPQPAIRAKYATVYDEPATIAKVGDVLYVIYDGGRIEPFEVEMAPFTVVLGDVSTAENQAMWDRIAGGAAIIACGRTEGRQ*
Ga0070708_1001619283	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MQTVTQPPIKAKFATVYDAPARIAKVHGGLYVIYDDGRIEPFEVEMAPFTVVLGDCQTAELQAMWDRIAGGAAMISCTRRQEVA*
Ga0066692_105674491	3300005555	Soil	MATVTQSPIKAKYATVYDAPARIAKVNGALYVIYDDGRIEPFEVEMAPFTVVLGDVQTADLQAMWDRIGGGAARIACTRAQMEVGR*
Ga0068857_1000949142	3300005577	Corn Rhizosphere	MRTVTQPTIKAKFATVHDQAARIAKVNQALYVIYDDGRIEDFAIEMAPFTVVLGDCQTADVQAMWDRIAGGAAQIACSRLQEVA*
Ga0066903_1000097689	3300005764	Tropical Forest Soil	MATVAAMMAPRNPAQPPIKAKYATVYDEPCTIAKVGQGLYVIYDDGGIEDFEVAMAPFTVVLGDVQTAETAAMWDRIAGGYARQACERLQGVR*
Ga0066903_1001628762	3300005764	Tropical Forest Soil	MPTLPQPPIKAKYATVYDVPATIAKVHDVLYVIYEGGQIEPFEVEMAPFTVVLGDVATAETAAMWDRVAGGPAMIATHRTMGRQ*
Ga0066903_1007060774	3300005764	Tropical Forest Soil	MTTVPQPTIKAKYATVYDAPARIAKVNDVLYVIYEDGRIEPFEVEMAPFVTVLGDCQTAELQAMWDRVAGGFATIACSRHEGRS*
Ga0066903_1007849075	3300005764	Tropical Forest Soil	MATVTQPTIKAKYATVYDIPARIAKVQDVLYVIYDDGRIENFEVEMAPFTVVLGNVSTAELQAMWDRVAGGAPVIACSRTEGRQ*
Ga0066903_1014206662	3300005764	Tropical Forest Soil	MATVAQPAIKAKFALVYDEPARIVKGDGRFFVVYDDGHIEDFEVEMAPFVVVLSDVSTAETQAMWDRVNGGAAWICTHRSQGVS*
Ga0066903_1045952212	3300005764	Tropical Forest Soil	MTTVASMMAPRKPAQPPIKAKYATVYDEPCTIATVGQALYVIYDDGGIEPFEVAMAPFTVVLGDVQTAETAAMWDRINGNAVGIALTRRQEVR*
Ga0066903_1049118542	3300005764	Tropical Forest Soil	MQTVAQPPIKAKYATVYDAPCTIAKVNQVLYVIYPDGRLEDFDVTMAPFTVVLGDVSVSETQAMWDRIAGGAAVIACSREMGVA*
Ga0066903_1055663322	3300005764	Tropical Forest Soil	MATVTQPTIKAKYATVYDEAATIAKVNDVLYVIYPDGRIEPFDVEMAPFTVVLGDVATAETAAMWGRIAGGPAMIACHRTEGRQ*
Ga0066903_1071941111	3300005764	Tropical Forest Soil	PQPTIKAKYATVYDEAATIARVNDVLWVIFDDGRIEPFEVEMAPFVVVLGDCQTADVQQMWDRVAGGFPAIACGRHEGRS*
Ga0081455_1000490115	3300005937	Tabebuia Heterophylla Rhizosphere	MMVAQTAPPVKAKYATVYDEAATIARVQGVLYVVYDDGRIEPFEVEMAPFTVILGDVSTAECQAMWDRISGGPAAIACRRQVGRN*
Ga0075428_1000421479	3300006844	Populus Rhizosphere	MATVAQTPIKAKYATVYDAPATIAKVNDILYVIYEDGRIEDFEVEMAPFTVVLGDVATAETQAMWDRIAGGAARIACSREERVQ*
Ga0075428_1000520915	3300006844	Populus Rhizosphere	MQTVAQPTIKAKNATVYDESCTIARVHDVLYVIYDDGRIEPFAVEMAPFTTILGDVALAETQAMWDRVSGGAAAIACSRQMEVA*
Ga0075428_1002210572	3300006844	Populus Rhizosphere	MQTVAQPTIKAKYATVYDEPARIAKVNGGLYVIYDDGRLVDFEVEMAPFTVVLGDCQTAETQAMWDRIAGGMAWIATHRAQEVA*
Ga0075428_1002992003	3300006844	Populus Rhizosphere	MQTVPQPRIKAKFAHLYDEAVQIAKVNDVLYVFHADGMVEPFEVEMAPFTTVLGDVALAETAAMWDRIHGGYAQIACTRRQEVS*
Ga0075428_1010175272	3300006844	Populus Rhizosphere	MQSVTQPTIRAKYAHIYDEACTIAKVHEVLYVLYADGRIEPFEVEMAPFTVVLGDVSLAETAAMWDRVSGGPAAIACSRRQEVA*
Ga0075428_1024835492	3300006844	Populus Rhizosphere	MQTVAQTPIKAKYATVYGEAATIAKVNGRLYVVFADRIEDFTVAMAPWTVVLGDCQVADDQQLRDQIAGGYAAIACGRA*
Ga0075428_1027035092	3300006844	Populus Rhizosphere	MRTVPQTSIKAKYATMYDEAARIAKVNGALYVIYDDGRIEDFEVEMAPFTVVLGDVAVAETAAMWDRIAGGYAAIACSREQGVQ*
Ga0075421_1000445747	3300006845	Populus Rhizosphere	MKTVAQPHVEAKFCTVYDEPARIAKVHGAYYVLYDDGRIEDFVIEMAPFTVVLGDVQTAEVQAMWDRINGGAARIACDRRQAVS*
Ga0075421_1002681094	3300006845	Populus Rhizosphere	VATVAQPTIKAKYATVYDEPATIAKVNDVLYVIYPDGRIEDFEVAMAPFTVVLGDVALAETAAMWDRISGGPVGVCLSRRQEVA*
Ga0075430_1009729791	3300006846	Populus Rhizosphere	MKTVAQPHVEAKFCTVYDEPARIAKVHGAYYVLYDDGRIEDFVIEMAPFTVVLGDVEIADTQQMLDRIAGGYAAVACGRAN*
Ga0075430_1015244602	3300006846	Populus Rhizosphere	MATVPQTAPVIQAKYAVIYDEACTVAKVNGVLFVFYDDGRVEDFTIEMAPFTTVLGDVQTCELQAMWDRVHGGCAAICTSRTMQAA*
Ga0075431_1000938907	3300006847	Populus Rhizosphere	HVEAKFCTVYDEPARIAKVHGAYYVLYDDGRIEDFVIEMAPFTVVLGDVQTAEVQAMWDRINGGAARIACDRRQAVS*
Ga0075431_1004186231	3300006847	Populus Rhizosphere	MATVAQTPIKAKYATVYDAPATIAKVNDILYVIYEDGRIEDFEVEMAPFTVVLGDVATAETQAMWDRIAGGAARIAC
Ga0075431_1006908032	3300006847	Populus Rhizosphere	MQTVAQPTIKAKFATVYDAPARIATVNGALYVIYDDGRIEPFAVEMAPFTVVLGDVATAETQAMWDRIGGGAAWICTHRTAGRS*
Ga0075420_1007515812	3300006853	Populus Rhizosphere	MQTVPQPRIKAKFAHLYDEAVQIAKVNDVLYVFHADGMVEPFEVEMAPFTTVLGDVALAETAAMWDRISGGPVGVCLSRRQEVA*
Ga0099827_103849983	3300009090	Vadose Zone Soil	MATVAQTTIKAKYATVYDDPARIAKVNGALYVIYDDGRIVDFDVEMAPFTVVLGDCQTAELQAMWDRISGGAAMICCSRRQEVQ*
Ga0111539_116346171	3300009094	Populus Rhizosphere	MATVPQPTIKAKYATVYDEPATIAQVGGVLYVLYGDGRVVDFEVAMAPFTTILGDCALVATQAVLDAKRGGAAAIACSREEGRA*
Ga0075418_103102702	3300009100	Populus Rhizosphere	MQTVAQPTIKAKFATVYDAPARIATVNGALYVLYDDGRIEPFAVEMAPFTVVLGDVATAETQAMWDRIGGGAAWICTHRTAGRS*
Ga0075418_104806411	3300009100	Populus Rhizosphere	MQSVTQPTIRAKYAHIYDEACTIAKVHEVLYVLYADGRIEPFEVEMAPFTVVLGDVAISELQAMWDRVAGGPVGICISRKMAVA*
Ga0075418_108469081	3300009100	Populus Rhizosphere	MATVPQTAPVIQAKYAVIYDEACTIARVNDVLHVIYDDGRIEPFEVEMAPFTTVLGDVQTCELQAMWDRVHGGCAAICTSRTM
Ga0075418_113255762	3300009100	Populus Rhizosphere	MSTVAQTPIKAKYATVYDEPATIAKVGGRLYVVFEDRIEDFAVEMAPFTVLLGDCQLADDQQLQDRIAGGYASIACDRDMEVA*
Ga0075418_119298671	3300009100	Populus Rhizosphere	MQTVTQPTIKAKYAHIYDEACTIAKVHDGLYVIYADGRIEDFEVEMAPFTVVLGDCQTAEVQAMWDRIAGGAAKVVCSRAMGVQ*
Ga0075418_123660111	3300009100	Populus Rhizosphere	MQTVTQPTIRAKYATVYDEPATIAKVNGQLYVIYDDGRIEDFQIEMSPFVVVLGDVQTSEIQAMWDRVHGGAVGICTSRQMQAA*
Ga0114129_100504905	3300009147	Populus Rhizosphere	VATVAQPTIKAKYATVYDEPATIAKVNDVLYVIYPDGRIEDFEVAMAPFTVVLGDVALAETAAMWDRIHGGAAAIACTRSQEVR*
Ga0114129_108622473	3300009147	Populus Rhizosphere	MTIVTQPAIRAKYATVYDEPATIAKVNDVLYVIYPDGRIEPFEVEMVPFTVVLADVQTAECQAMWDRIAGGPAAIACGRRQEV*
Ga0114129_109363323	3300009147	Populus Rhizosphere	MQTVPQPRIKAKFAHLYDEAVQIAKVNDVLYVFHADGMVEPFEVEMAPWTTILGDVATAECQAMFDRIHGGAARIACSRLSEVS*
Ga0114129_115196481	3300009147	Populus Rhizosphere	QPTIKAKYATVYDEPARIAKVNGGLYVIYDDGRLVDFEVEMAPFTVVLGDCQTAETQAMWDRIAGGMAWIATHRAQEVA*
Ga0111538_117211222	3300009156	Populus Rhizosphere	MATLPQPTSKAKYATVYDEPATIAKVNGQLYVIYDDGRIEDFQIEMSPFVVVLGDVQTSELQAMWDRVHGGAAQIACQRVMQAA*
Ga0075423_105998332	3300009162	Populus Rhizosphere	METVPQPLIKAKFATVYDIPARIAKVNEVLYVIYDDGRVEPFEVEMAPWTTILGDVATAEIQAMWDRISGGAAAIACSRLSEVA*
Ga0126372_114031772	3300010360	Tropical Forest Soil	MQTIPQPTIKAKYVEIYDEAATIAKVNDVLYVLYPDGRVEDFTIEMASFVTVLGDCQTSELQAMWDRVAGGFAAIACSRHEGRS*
Ga0126377_132039911	3300010362	Tropical Forest Soil	AKYATVYDEPARIAKVGDALYVMYDDGRLEDFAIEMAPFTVVLGDVATAECQAMWDRIAGGAARIACARAN*
Ga0126379_131509282	3300010366	Tropical Forest Soil	MQTVAQPTIRAKYATVYDVPATIAKVNDVLYVIYPDGRLEDFEVEMAPFTVVLGDVAIAETAAMWDRVNGGFAAIACRRRQEA
Ga0126383_114278232	3300010398	Tropical Forest Soil	MQTIPQPTIKAKYATVYDEAATIARVNDVLWVIFDDGRIEPFEVEMAPFVVVLGDCQTADVQQMWDRVAGGFPAIACGRHEGRS*
Ga0137383_102584271	3300012199	Vadose Zone Soil	MQTVAQPPIKAKYATVYDEPARIAKVNGALYVIYDDGRIVDFDVEMAPFTVVLADVVLSESQAMWDRIAG
Ga0137380_103854192	3300012206	Vadose Zone Soil	MQTVTQPTIKAKYATVYDAPARIAKVHGALYVIYDDGRIEDFAIEMAPFTVVLGDCQTAELQAMWDRIAGGTATIACSRRQEVA*
Ga0137379_105553463	3300012209	Vadose Zone Soil	MATVTQSPIKAKYATMYDAPARIAKVNGALYVIYDDGRIEPFEVEMAPFTVVLGDVQTADLQAMWDRIGGGAARIACTRAQMEV
Ga0137378_104355361	3300012210	Vadose Zone Soil	MANATVAQTTIKAKYATVYDTPARIAKVNGALYVIYDDGRIEPFEVEMAPFTVVLGDVTMAETQAIMDRMHGGAAMICCTRRQEVA*
Ga0137377_100466956	3300012211	Vadose Zone Soil	MQTVAQPPIKAKYATVYDEPARIAKVNGALYVIYDDGRIVDFDVEMAPFTVVLADVVLSESQAMWDRIAGGAAMICCTRRQEVA*
Ga0150985_1013841323	3300012212	Avena Fatua Rhizosphere	GQDDSRASVSNVLEEVLNMATVAQPTIKAKYVTVYDAPARIAKVHEVLYVIYDDGRIEPFEVEMAPFTVVLGDCQTAELQAMWDRIAGGAAQITCSRLQEVA*
Ga0150985_1163583581	3300012212	Avena Fatua Rhizosphere	SLRNEVMTSVTQTPIKSKYATVYDEPCTIAKVNDVLYVVFEDRIEPFAVEMAPFTVVLGDCQTADVQTMWDRVAGGCAAVACSREEGVR*
Ga0137387_105693562	3300012349	Vadose Zone Soil	MQTVAQPPIKAKYATVYDEPARIAKVNGALYVIYDDGRIVDFDVEMAPFTVVLADVVLSESQAMWDRIGGGAARIACTRAQMEVGR*
Ga0137386_102819633	3300012351	Vadose Zone Soil	MQTVTQPTIKAKYATVYDAPARIAKVHGVLYVIYDDGRIEDFAIEMAPFTVVLGDCQTAELQAMWDRIAGGAATIACSR
Ga0137385_102755944	3300012359	Vadose Zone Soil	MATVTQSPIKAKYATVYDAPARIAKVNGALYVIYDDGRIEPFEVEMAPFTVVLGDVQTADLQAMWDRIGGGAARIACTRA
Ga0150984_1089092212	3300012469	Avena Fatua Rhizosphere	MATVAQPTIKANYVTVYDAPARIAKVHEVLYVIYDDGRIEPFEVEMAPFTVVLGDCQTAELQAMWDRIAGGAAQITCSRLQEVA*
Ga0126369_100036032	3300012971	Tropical Forest Soil	MMAPRNPAQPPIKAKYATVYDEPCTIAKVGQGLYVIYDDGGIEDFEVAMAPFTVVLGDVQTAETAAMWDRIAGGYARQACERLQGVR*
Ga0126369_110115791	3300012971	Tropical Forest Soil	MTTVPQPTIKAKYATVYDAPARIAKVNDVLYVIYEDGRIEPFEVEMAPFVTVLGDCQTAELQAMWDRVAGGFATIA
Ga0132258_128159893	3300015371	Arabidopsis Rhizosphere	MTIVTQPTIHAKYATVYDEACRIAKVHGALYVIYDDGRIEEFDVAMAPFTVVLGDVATADTQAMWDRIHSGSAWICTHRRQEV*
Ga0182036_103237083	3300016270	Soil	MTIVTQPTIKAKYATVYDAACTLAQVNQGLYVIYDDGCIEEFSIEMAPFTVVLGDVTTAGTQAMWDRIAGGAAA
Ga0182036_115563312	3300016270	Soil	MTTVAQAPIRAKYATVYDEAATIARVNDVLYVIYPDGRIEPFEVEMAPFTVVLGDVATSETQAMWDRIAGGAAAIC
Ga0182041_111648531	3300016294	Soil	MATVAQPTIKAKYALVYDVPARIAKVNGALYVIYDDGRIEPFEVEMAPFTVILGDCQTADVQQMWDRIAGGAPAICT
Ga0182033_116685992	3300016319	Soil	MATVAQPAMRAKYATVYDEAATIAKVNDVLYVIYDDGRIEPFEVEMAPFTVILGDCQTADVQQMWDRIAGGAPAICTHRTEGRQ
Ga0182040_105964602	3300016387	Soil	MATIAQPTIKAKYASVYDEPATIAKVNNVLYVLYPDGRIEPFEVDMAPFTVVLGDVATAETQAMWDRIAGGPAAICTHRTMGRS
Ga0182037_106405662	3300016404	Soil	MQTVAQPTIKAKFVTVYDEPARIVKVNNVLYIIYDDGRIEDFTIEMAPFVVVLGDCQTADVQQMWDRIAGGAPAICTHRTEGRQ
Ga0182037_107443333	3300016404	Soil	MASVAHPTIRAKYATVYDEACTIAQVNQGLYVIYEDGRIEDFSIEMAPFTVVLGDVAVAETAAMWDRLTG
Ga0182039_101974462	3300016422	Soil	MATVAQPTIKAKYALVYDVPARIAKVNGALYVIYDDGRIEPFEVEMAPFTVVLGDCQTADVQQMWDRIAGGAPAICTHRTEGRQ
Ga0182038_118030741	3300016445	Soil	MTIVPQPQVKAKYATVYDEPCTIAKWGQALYVIYDDGRVEEFEVEMAPFTVVLGDVATSETQAMWDRIAGGPAAICTSRTEGRQ
Ga0207674_101139852	3300026116	Corn Rhizosphere	MRTVTQPTIKAKFATVHDQAARIAKVNQALYVIYDDGRIEDFAIEMAPFTVVLGDCQTADVQAMWDRIAGGAAQIACSRLQEVA
Ga0209481_103473181	3300027880	Populus Rhizosphere	MATVAQTPIKAKYATVYDAPATIAKVNDILYVIYEDGRIEDFEVEMAPFTVVLGDVATAETQAMWDRIAGGAARIACSREERVQ
Ga0209590_104004912	3300027882	Vadose Zone Soil	MATVAQTTIKAKYATVYDDPARIAKVNGALYVIYDDGRIVDFDVEMAPFTVVLGDCQTAELQAMWDRISGGAAMICCSRRQEVQ
Ga0207428_112690151	3300027907	Populus Rhizosphere	MQTVAQPTIKAKNATVYDESCTIARVHDVLYVIYDDGRIEPFAVEMAPFTTILGDVALAETQAMWDRVSGGAAAIACSRQMEVA
Ga0209382_100351317	3300027909	Populus Rhizosphere	MKTVAQPHVEAKFCTVYDEPARIAKVHGAYYVLYDDGRIEDFVIEMAPFTVVLGDVQTAEVQAMWDRINGGAARIACDRRQAVS
Ga0209382_103076852	3300027909	Populus Rhizosphere	VATVAQPTIKAKYATVYDEPATIAKVNDVLYVIYPDGRIEDFEVAMAPFTVVLGDVALAETAAMWDRISGGPVGVCLSRRQEVA
Ga0209382_113620852	3300027909	Populus Rhizosphere	VVARFATVYDVPATIAKVNEVLYVIFDDRIEPFEVEMAPFTVVLGDVQLSETQAMWDRIAGGAAAIACSRAQEVR
Ga0318516_104485132	3300031543	Soil	MQTLPQPTIKAKYATVYDAACTLAHVNRVLYVIYDDGRIEEFSIAMAPFTVVLGDVQTAEPAAMWDRIAGGPAALCTSRQMLEV
Ga0318541_106062301	3300031545	Soil	MATVAQPTIKAKYALVYDVPARIAKVNGALYVIYDDGRIEPFEVEMAPFTVILGDCQTADVQQMWDRIAGGAPAICTHRTEGRQ
Ga0318528_106867101	3300031561	Soil	MTIVTQPTIKAKYATVYDAACTLAQVNQGLYVIYDDGCIEEFSIEMAPFTVVLGDVTTAGTQAMWDRIAGGAAAIACSREEG
Ga0318561_107913311	3300031679	Soil	MASVAHPTIRAKYATVYDEACTIAQVNQGLYVIYEDGRIEDFSIEMAPFTVVLGDVAVAETAAMWDRLTGGYAAVACSRDEGRS
Ga0318572_102785622	3300031681	Soil	MTIVTQPTIKAKYATVYDAPCTIAKVNQVLYVFYPDGRIEEFTIEMAPFTVVLGDVQTAETAAMWARLAGGPAAICTSRKMLEV
Ga0306917_106114082	3300031719	Soil	MTTVAQAPIRAKYATVYDEAATIARVNDVLYVIYPDGRIEPFEVEMAPFTVVLGDVATSETQAMWDRIAGGAAAICTHRTEGRQ
Ga0318502_105811183	3300031747	Soil	ASVAHPTIRAKYATVYDEACTIAQVNQGLYVIYEDGRIEDFSIEMAPFTVVLGDVAVAETAAMWDRLTGGYAAVACSRDEGRS
Ga0306919_102892842	3300031879	Soil	MATIAQPTIKAKYASVYDEPATIAKVNNVLYVLYPDGRIEPFEVEMAPFTVVLGDVATAETQAMWDRIAGGPAALCTHRTMGRS
Ga0306925_104010523	3300031890	Soil	MATIAQSPIKAKFASVYDEPATIAKVNDVLYVLYDDGRIEPFEVEMAPWVTLLGDVSTAETQAMWDRIAGGPAAICTHRTMGRQ
Ga0306925_104178763	3300031890	Soil	MTIVTQPTIKAKYATVYDAACTLAQVNQGLYVIYDDGCIEEFSIEMAPFTVVLGDVTTAGTQAMWDRIAGG
Ga0306925_108890461	3300031890	Soil	MATVAQPTIKAKYATVYDEAATIAKVHDVMYVIYDDGRIEPFEVEMAPFVTILGDVAISETQAMWDRIAGGPAAICTHRTMGRS
Ga0306925_109063902	3300031890	Soil	MTTVAQAPIRAKYATVYDEAATIARVNDVLYVIYPDGRIEPFEVEMAPFTVVLGDVATSETQAMWDRIAGG
Ga0310900_103545292	3300031908	Soil	MATLPQPTIKAKYATVYDEPARIAKVNGGLYVIYDDGRLVDFEVEMEPFTVVLGDCQTAETQAMWDRIAGGMAWIATHRAQEVA
Ga0306923_103626621	3300031910	Soil	MTIVTQPTIKAKYATVYDAACTLAQVNQGLYVIYDDGCIEEFSIEMAPFTVVLGDVTTAGTQAMWDRIAGGAAAIACSREEGVN
Ga0306921_102749311	3300031912	Soil	MQTLPQSTSKAKYATVYDAACTLAHVNRVLYVIYDDGRIEEFSIAMAPFTVVLGDVQTAEPAAMWDRIAGGPAALCTSRQMLEV
Ga0306921_120689871	3300031912	Soil	MATVAQPTIKAKYAIVYSESATIAKVNNVLYVLYDDGRVEPFEIEMSPWITILGDVNVAETQAMWDRVAGGAAAICTSRTM
Ga0310909_106730012	3300031947	Soil	MATVAQPTIKAKYATVYDEAATIAKVHDVMYVIYDDGRIEPFEVEMAPFVTILGDVAISETQAMWDRIAGGPAAICTHRTMG
Ga0306922_103860591	3300032001	Soil	KTMTIVTQPTIKAKYATVYDAACTLAQVNQGLYVIYDDGCIEEFSIEMAPFTVVLGDVTTAGTQAMWDRIAGGAAAIACSREEGVN
Ga0318504_103728602	3300032063	Soil	LPQPTIKAKYATVYDAACTLAHVNRVLYVIYDDGRIEEFSIAMAPFTVVLGDVQTAEPAAMWDRIAGGPAALCTSRQMLEV
Ga0306924_111795371	3300032076	Soil	MATIAQPTIKAKYASVYDEPATIAKVNNVLYVLYPDGRIEPFEVEMAPFTVVLGDVAVSETQAMWDRVSGGCAAIACSRHEGRQ
Ga0306924_122704732	3300032076	Soil	MTSVAHPTIRAKYATVYDAPCTIAKVNQVLYVFYPDGRIEEFTIEMAPFTVVLGDVQTAETAAMWARLAGGPAAICTSRKMLEV
Ga0306920_1008745613	3300032261	Soil	MASVAHPTIRAKYATVYDEACTIAQVNQGLYVIYEDGRIEDFSIEMAPFTVVLGDVAVAETAAMWDRLTGGYAAVACSR
Ga0306920_1013312572	3300032261	Soil	MTTVAQAPIRAKYATVYDEAATIARVNDVLYVIYPDGRIEPFEVEMAPFTVVLGDVATSETQAMWDRIAGGPAAICTSRTEGRQ
Ga0306920_1021106101	3300032261	Soil	MATVAQPTIKAKYAIVYSESATIAKVNNVLYVLYDDGRVEPFEIEMSPWITILGDVNVAETQAMWDRVAGGAAAICTSRTMGRQ
Ga0310914_112074941	3300033289	Soil	MATIAQPTIKAKYASVYDEPATIAKVNNVLYVLYPDGRIEPFEVEMAPFTVVLGDVATAETQAMWDRIAGGPAALCTHR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F080637

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences