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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F080639 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 115 |
| Average Sequence Length | 150 residues |
| Representative Sequence | METQMAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDALREDTRREIGHHADALREDMRREVGQHADTLRAELRDALAQHAALLHTTRPEPPRWRDVLLWLSTALLGLTAVGVILLVVSRFVGP |
| Number of Associated Samples | 99 |
| Number of Associated Scaffolds | 115 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 73.68 % |
| % of genes near scaffold ends (potentially truncated) | 39.13 % |
| % of genes from short scaffolds (< 2000 bps) | 84.35 % |
| Associated GOLD sequencing projects | 90 |
| AlphaFold2 3D model prediction | No |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (73.913 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (35.652 % of family members) |
| Environment Ontology (ENVO) | Unclassified (34.783 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (51.304 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Transmembrane (alpha-helical) | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 88.36% β-sheet: 0.00% Coil/Unstructured: 11.64% | Feature Viewer |
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| Pfam ID | Name | % Frequency in 115 Family Scaffolds |
|---|---|---|
| PF01724 | DUF29 | 10.43 |
| PF01381 | HTH_3 | 7.83 |
| PF04365 | BrnT_toxin | 6.09 |
| PF03330 | DPBB_1 | 3.48 |
| PF02585 | PIG-L | 2.61 |
| PF05168 | HEPN | 1.74 |
| PF07508 | Recombinase | 1.74 |
| PF13560 | HTH_31 | 1.74 |
| PF00072 | Response_reg | 0.87 |
| PF01434 | Peptidase_M41 | 0.87 |
| PF06897 | DUF1269 | 0.87 |
| PF13091 | PLDc_2 | 0.87 |
| PF01609 | DDE_Tnp_1 | 0.87 |
| PF07228 | SpoIIE | 0.87 |
| PF11455 | MazE-like | 0.87 |
| PF07798 | CCDC90-like | 0.87 |
| PF01226 | Form_Nir_trans | 0.87 |
| COG ID | Name | Functional Category | % Frequency in 115 Family Scaffolds |
|---|---|---|---|
| COG2929 | Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system | Defense mechanisms [V] | 6.09 |
| COG2120 | N-acetylglucosaminyl deacetylase, LmbE family | Carbohydrate transport and metabolism [G] | 2.61 |
| COG1895 | HEPN domain protein, predicted toxin of MNT-HEPN system | Defense mechanisms [V] | 1.74 |
| COG1961 | Site-specific DNA recombinase SpoIVCA/DNA invertase PinE | Replication, recombination and repair [L] | 1.74 |
| COG2250 | HEPN domain protein, predicted toxin of MNT-HEPN system | Defense mechanisms [V] | 1.74 |
| COG0465 | ATP-dependent Zn proteases | Posttranslational modification, protein turnover, chaperones [O] | 0.87 |
| COG2116 | Formate/nitrite transporter FocA, FNT family | Inorganic ion transport and metabolism [P] | 0.87 |
| COG3039 | Transposase and inactivated derivatives, IS5 family | Mobilome: prophages, transposons [X] | 0.87 |
| COG3293 | Transposase | Mobilome: prophages, transposons [X] | 0.87 |
| COG3385 | IS4 transposase InsG | Mobilome: prophages, transposons [X] | 0.87 |
| COG4803 | Uncharacterized membrane protein | Function unknown [S] | 0.87 |
| COG5421 | Transposase | Mobilome: prophages, transposons [X] | 0.87 |
| COG5433 | Predicted transposase YbfD/YdcC associated with H repeats | Mobilome: prophages, transposons [X] | 0.87 |
| COG5659 | SRSO17 transposase | Mobilome: prophages, transposons [X] | 0.87 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 73.91 % |
| All Organisms | root | All Organisms | 26.09 % |
| Visualization |
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| Habitat | Taxonomy | Distribution |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 35.65% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 14.78% |
| Groundwater Sand | Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand | 9.57% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 8.70% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 6.96% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 6.09% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 3.48% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 2.61% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 2.61% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 1.74% |
| Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 0.87% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 0.87% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 0.87% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.87% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 0.87% |
| Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 0.87% |
| Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere | 0.87% |
| Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 0.87% |
| Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere | 0.87% |
| Visualization |
|---|
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| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000033 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
| 3300001431 | Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly | Environmental | Open in IMG/M |
| 3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
| 3300005177 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 | Environmental | Open in IMG/M |
| 3300005178 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 | Environmental | Open in IMG/M |
| 3300005180 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 | Environmental | Open in IMG/M |
| 3300005181 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 | Environmental | Open in IMG/M |
| 3300005294 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil | Environmental | Open in IMG/M |
| 3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300005447 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 | Environmental | Open in IMG/M |
| 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Environmental | Open in IMG/M |
| 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Environmental | Open in IMG/M |
| 3300005554 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 | Environmental | Open in IMG/M |
| 3300005555 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 | Environmental | Open in IMG/M |
| 3300005559 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 | Environmental | Open in IMG/M |
| 3300005561 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 | Environmental | Open in IMG/M |
| 3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
| 3300006794 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 | Environmental | Open in IMG/M |
| 3300006797 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108 | Environmental | Open in IMG/M |
| 3300006844 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Host-Associated | Open in IMG/M |
| 3300006845 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 | Host-Associated | Open in IMG/M |
| 3300006847 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Host-Associated | Open in IMG/M |
| 3300006853 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4 | Host-Associated | Open in IMG/M |
| 3300006880 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Host-Associated | Open in IMG/M |
| 3300007076 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Host-Associated | Open in IMG/M |
| 3300007255 | Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 | Environmental | Open in IMG/M |
| 3300007265 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 | Environmental | Open in IMG/M |
| 3300009012 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159 | Environmental | Open in IMG/M |
| 3300009038 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG | Environmental | Open in IMG/M |
| 3300009089 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG | Environmental | Open in IMG/M |
| 3300009090 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG | Environmental | Open in IMG/M |
| 3300009100 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2 | Host-Associated | Open in IMG/M |
| 3300009137 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158 | Environmental | Open in IMG/M |
| 3300009147 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009811 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 | Environmental | Open in IMG/M |
| 3300009821 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 | Environmental | Open in IMG/M |
| 3300009836 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20 | Environmental | Open in IMG/M |
| 3300009837 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 | Environmental | Open in IMG/M |
| 3300010119 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010336 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015 | Environmental | Open in IMG/M |
| 3300010360 | Tropical forest soil microbial communities from Panama - MetaG Plot_6 | Environmental | Open in IMG/M |
| 3300010373 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4 | Environmental | Open in IMG/M |
| 3300011270 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG | Environmental | Open in IMG/M |
| 3300012199 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG | Environmental | Open in IMG/M |
| 3300012201 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG | Environmental | Open in IMG/M |
| 3300012202 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG | Environmental | Open in IMG/M |
| 3300012204 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG | Environmental | Open in IMG/M |
| 3300012206 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG | Environmental | Open in IMG/M |
| 3300012207 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG | Environmental | Open in IMG/M |
| 3300012209 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG | Environmental | Open in IMG/M |
| 3300012210 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG | Environmental | Open in IMG/M |
| 3300012211 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG | Environmental | Open in IMG/M |
| 3300012212 | Combined assembly of Hopland grassland soil | Host-Associated | Open in IMG/M |
| 3300012349 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG | Environmental | Open in IMG/M |
| 3300012350 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG | Environmental | Open in IMG/M |
| 3300012351 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG | Environmental | Open in IMG/M |
| 3300012353 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG | Environmental | Open in IMG/M |
| 3300012355 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG | Environmental | Open in IMG/M |
| 3300012356 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG | Environmental | Open in IMG/M |
| 3300012359 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG | Environmental | Open in IMG/M |
| 3300012360 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG | Environmental | Open in IMG/M |
| 3300012361 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG | Environmental | Open in IMG/M |
| 3300012362 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG | Environmental | Open in IMG/M |
| 3300012401 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012410 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012469 | Combined assembly of Soil carbon rhizosphere | Host-Associated | Open in IMG/M |
| 3300012532 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG | Environmental | Open in IMG/M |
| 3300012582 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG | Environmental | Open in IMG/M |
| 3300012922 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG | Environmental | Open in IMG/M |
| 3300012929 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012930 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012971 | Tropical forest soil microbial communities from Panama - MetaG Plot_1 | Environmental | Open in IMG/M |
| 3300012972 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG | Environmental | Open in IMG/M |
| 3300015053 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction) | Environmental | Open in IMG/M |
| 3300015264 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300015356 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG | Environmental | Open in IMG/M |
| 3300015358 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG | Environmental | Open in IMG/M |
| 3300017659 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG | Environmental | Open in IMG/M |
| 3300018054 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1 | Environmental | Open in IMG/M |
| 3300019259 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300022724 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300026332 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes) | Environmental | Open in IMG/M |
| 3300026552 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes) | Environmental | Open in IMG/M |
| 3300027490 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes) | Environmental | Open in IMG/M |
| 3300027511 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes) | Environmental | Open in IMG/M |
| 3300027655 | Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027748 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes) | Environmental | Open in IMG/M |
| 3300027882 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300027909 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027952 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes) | Environmental | Open in IMG/M |
| 3300027961 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes) | Environmental | Open in IMG/M |
| 3300028784 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121 | Environmental | Open in IMG/M |
| 3300030829 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030830 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030902 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030990 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031092 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300034681 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| ICChiseqgaiiDRAFT_21186201 | 3300000033 | Soil | MTDPSDRPHISQDEVPSQPPSGEPLSVPVETXRAVQQLREAGFSADQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDAWHEDMRREIGHHTDAIREDMRREVGQHADTLREELRGAFAQQADLFRTTRPEPPRQRDVPRWLXTXLLALTAVGVILLVVSRFVSP* |
| F14TB_1006650231 | 3300001431 | Soil | MTDPSDRPHISQDEVPSQPPSGEPLSVPVETQRAVQQLREAGFSADQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDAWHEDMRREIGHHAEAIREDMRREVGQHADTLREELRGAFAQQADLFRTTRPEPPRQRDVPRWLTTALLALTAVGVILLVVSRFVSP* |
| Ga0063356_1001089144 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MTDPVERPQTIQDEIPPQETCGEPLTPPGETQLAIQQLREAGFSEGQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLTQQLDAWHEDMRREIGHQADAVREELRGALAQQADLLRTRRPEPQRRRDVLLWLNTALLILIAVGVILSVVTMFVNP* |
| Ga0066690_103138293 | 3300005177 | Soil | QQLREAGFSEGQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDAWHADMRREIGHHADAVREDMCREVGQHADTLREELRSAFAQQADLLHTTHIAPPRWRDVLLWLSTALLGLTAVGVILLVVSRFVGP* |
| Ga0066688_109606371 | 3300005178 | Soil | GFSEDQQAALTTALLRVLALWTQQATREDLHAEQEALAQRLAQQLDALHEDIRREVGQHTDAVREELRDAFAQHADVLHATRIEPLRWRDVLLWLITALLVLTTVGVALLVIHGVVSP* |
| Ga0066685_110310241 | 3300005180 | Soil | MTEPVERPHVSQEEGPPQDARGEPLTVPMETQMAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALTQRLAQQLDALREDTRREIGHHADALREDMRREVGQHADTLRAELRDALAQHAALLGLTAVGVILLVVSRFVGP* |
| Ga0066678_100692461 | 3300005181 | Soil | MTDPVERSQASQDEMPPQESCGGPLPLPGETQLAIQQLREAGFSEGQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDAWHADMRREIGHHADAVREDMCREVGQHADTLREELRSAFAQQADLFHTTRPEPPRQ |
| Ga0065705_104580492 | 3300005294 | Switchgrass Rhizosphere | MTDPSDRPHASQDKVPSQAISGEPLPGPVETQLAVQQLREAGFSADQQAALTTALLRVLALWTQQATREDLHAEHQALAQRLAQQLDAWHEDMRREIGYHADAVREDMRREVGQHADTLRAELRGAFAQQADVFRTARPEPPRQ |
| Ga0066388_1008264301 | 3300005332 | Tropical Forest Soil | MTDPMERPQNVSDEALQHVPKEEPPPLPVDTQMAVQQLREAGFSADQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDTWHEDIRREIGHHADAIREDMRREVGQHADTLREELRGAFAQQADLFRTTRPEPPRQRDVPRWLLTALLALTAVGVSLLVVARFVSP* |
| Ga0066388_1019310702 | 3300005332 | Tropical Forest Soil | MTEPVERPQVGQNEAPAHEPREEPLPRPVESFTAVQQLREAGFSDDQQAALTTALLRVLALWTQQATRGDLHAEHQARAQRLMQQLDAQREDTRRDIGQHADALREDLRREVGQHADTLREEMRGAFAQHAALLSLTRPKPARWRDVLLWVIATLLGLTTIGVILLVVARCVGF* |
| Ga0066689_101383642 | 3300005447 | Soil | MTEPVERPHASQDEGPPPEPRGEPFLLPVETHMAVQQLREAGFSEDQQAALTTALLRGLALWTQQATRGDLHAEHQALAQRLAQQLDALREDTRREIGHHADALREDMRREVGQHADTVRAELRDALAQHAALLHTTRPEPPRWRDGLLWLSTALLGLTAVGVILLVVSRFVGP* |
| Ga0066689_102828891 | 3300005447 | Soil | MTDPVERSQASQDEMPPQESCGGPLPLPGETQLAIQQLREAGFSEGQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDAWHADMRREIGHHADAVREDMCREVGQHADTLREELRSAFAQQADLFHTTRPEPPRQRDVPLWLTTALLVLTAVGVILLVVSRFVSP* |
| Ga0070706_1001351541 | 3300005467 | Corn, Switchgrass And Miscanthus Rhizosphere | AGFSDDQQAALATALLRVMALWTQQVTRGDLHAEQQALGQRLAQQLDARHEDMRRDIGHHADALREDMRREVGHHADTLRAELRDAFAQHAALLHTTRPEPPRWRDVLLWLITALLGLTAGGVILLVVHRFVGP* |
| Ga0070706_1019026571 | 3300005467 | Corn, Switchgrass And Miscanthus Rhizosphere | ETPLAIQQLRAAGFSDDQQAALTTALLRVLALWTQQATRDDVHAEQQALAQRLAQQLDARHEDMRRDIGYHADAIREDMRREVAQHADAIREELRGALAQQADFLRMTRAASARRWDGPRWLLIALLGLTCAGVLLLVVRSVLDW* |
| Ga0070698_1006309481 | 3300005471 | Corn, Switchgrass And Miscanthus Rhizosphere | MTDAVEPPQGGQHEVPLQDTRGEALPDPVETAQAIQQLRAAGFSDDQQAALATALLRVMALWTQQVTRGDLHAEQQALGQRLAQQLDARHEDMRRDIGHHADALREDMRREVGHHADTLRAELRDAFAQHAALLHTTRPEPPRWRDVLLWLITALLGLTAGGVILLVVHRFVGP* |
| Ga0066661_100773991 | 3300005554 | Soil | MTDPVERSQASQDEMPPQESCGGPLPLPGETQLAIQQLREAGFSEGQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDAWHADMRREIGHHADAVREDMCREVGQHADTLREELRSAFAQQADLFRTTRPEPPRQRDVPLWLTTALLVLTAVGVILLVVSRFVSP* |
| Ga0066692_107638781 | 3300005555 | Soil | MTDPVERSQTSQDERPPQESCGGPLPLPGETQLAIQQLREAGFSEGQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDAWHADMRREIGHHADAVREDMCREVGQHADTLREELRSAFAQQADLFRTTRPEPPRQRDVPLWLT |
| Ga0066700_100210145 | 3300005559 | Soil | MTEPVERPHVSQEEGPPQDARGEPLTVPMETQMAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALTQRLAQQLDALREDTRREIGHHADALREDMRREVGQHADTVRAELRDALAQHAALLHTTRPEPPRWRDGLLWLSTALLGLTAVGVILLVVSRFVGP* |
| Ga0066699_100711872 | 3300005561 | Soil | MTEPVERPQASQDEGPPQDAGGEHLTVPIETQMAVQQLREAGFSEDQQAALTAALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDALREDTRREIGHHADALREDMRREVGQHADTVRAELRDALAQHAALLHTTRPEPPRWRDGLLWLSTALLGLTAVGVILLVVSRFVGP* |
| Ga0066903_1014786931 | 3300005764 | Tropical Forest Soil | MTEPVERPQVGQNEAPAHEPREEPLPRPVESFTAVQQLREAGFSDDQQAALTTALLRVLALWTQQATRGDLHAEHQARAQRLMQQLDAQREDTRRDIGQHADALREDLRREVGQHADTLREEMRGAFAQHAALLSLTRPKPARWRDVLLWVIATLLGLTTIGV |
| Ga0066658_104737881 | 3300006794 | Soil | MTEPVERPQASQDEGPPQDARGEHLTVPMETQMAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEQQALAQRLAQQLDTLREDTRRDIGHRADALREDMCREVGQHTEALRKEMRSAFAQQADLLHTTHIAPPRRRDVLLWLITALLGLTAVGVILLVVSRFVGP* |
| Ga0066659_100890904 | 3300006797 | Soil | PPQESRGGPLPLPGETQLAIQQLREAGFSEGQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDAWHADMRREIGHHADAVREDMCREVGQHADTLREELRSAFAQQADLFHTTRPEPPRQRDVPLWLTTALLVLTAVGVILLVVSRFVSP* |
| Ga0066659_109177161 | 3300006797 | Soil | MTEPVERPHVSQEEGPPQDARGEPLTVPMETQMAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDALREDTRRDIGHHADALREDMRREVGQHADTLRAELRDALAQHAALLHTTRPEPPAGGMCCCG* |
| Ga0075428_1000781752 | 3300006844 | Populus Rhizosphere | MTDPMERPQSVSAEALQRVPEEEPPPLPVDTQMAVQQLREAGFSADQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDAGHADMRREIGHHAEAIREDMRREVGQHADTLREELRGAFAQQADLFRTTRLEPPRQRDVPRWLFTVLLALTAVGVSLLVVGRFVSP* |
| Ga0075421_1014471571 | 3300006845 | Populus Rhizosphere | MTDPVERPKTSQDEIPPQEICGEPLPPPGETQLAIQQLREAGFSEGQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDAWHEDMRREIGHHADAVREELRGALAQQADLLHTTRSEPSRRRDVLLWLNTALLVLIAVGVILSVVYRFVSP* |
| Ga0075431_1005649923 | 3300006847 | Populus Rhizosphere | MTDPMERPQSVSAEALQRVSEEEPPPLPVDTQMAVQQLREAGFSADQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDAGHADMRREIGHHAEAIREDMRREVGQHADTLREELRGAFAQQADLFRTTRLEPPRQRDVPRWLFTVLLALTAVGVSLLVVGRFVSP* |
| Ga0075420_1010875992 | 3300006853 | Populus Rhizosphere | MTDPMERPQSVSAEALQRVPEEEPPPLPVDTQMAVQQLREAGFSADQQAALTTALLRVLALWTQQATRGDLHAEHQALRQRLMQQLDAGHEDMRREIGHHAEAIREDMRREVGQHADTLREELRGAFAQQADLFRTTRLEPPRQRDVPRWLFTVLLALTAVGVSLLVVGRFVSP* |
| Ga0075429_1010003882 | 3300006880 | Populus Rhizosphere | MTDPMERPQSVSAEALQRVPEEEPPPLPVDTQMAVQQLREAGFSADQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDAGHADMRREIGHHAEAIREDMRREVGQHADTLREELRGAFAQQADLFRTTRLEPPRQRDVPRWLFTVLLALTAVGVSLLVVSRFVSP* |
| Ga0075429_1017838551 | 3300006880 | Populus Rhizosphere | MTDPVERPKTSQDEIPPQEICGEPLPPPGETQLAIQQLREAGFSEGQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDAWHEDMRREIGHHADAVREELRGALAQQADLLHTTRSEPSRRRDVLLWLNTA |
| Ga0075435_1010079051 | 3300007076 | Populus Rhizosphere | MTDPVERPQASQDERPLQETQGERLTPPGETQLAIQQLREAGFSEGQQAALTTALLRVLALWTQQATRGDLHAEHQALAQHLAQQLDAWHEDMRREIGHHADAVREDMRREVGQHADRLRAELRGAFAQQADLFRTTRPEPPHQRAVPFWLPTALLILTTVGVMLLVVHRFVSP* |
| Ga0099791_104654301 | 3300007255 | Vadose Zone Soil | MAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDALREDTRREIGHHADALREDMRREVGQHADTVRAELRDALAQHAALLHTTRPEPPRWRDVLLWLSTALLGLTAVGVILLVVSRFVGP* |
| Ga0099794_101206643 | 3300007265 | Vadose Zone Soil | MAVQQLREAGFSEDQQAALTTALLRVLALWTQQTTRGDLHAEHQALAQQLDAWHADMRREIGHHADALREDMRREVGQHADTVRAELRDALAQHAALLHTTRPEPPRWRDVLLWLSTALLGLTA |
| Ga0066710_1001403274 | 3300009012 | Grasslands Soil | MTEPVERPQASQDEGPPQDARGEHLTVPMETQMAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALTQRLAQQLDALREDTRREIGHHADALREDMRREVGQHADTVRAELRDALAQHAALLHTTRPEPPRWRDGLLWLSTALLGLTAVGVILLVVSRFVGP |
| Ga0099829_100286106 | 3300009038 | Vadose Zone Soil | MAVQQLREAGFSADQQAALTTALLRVLALWTQQATRGDLHAEQQALAQQLDALHDDIRREVRQHAEGVRAELRDALAQHADVLHATRIEPPHRRDVLLWLITALLFLTTVGVVMLVIHSVVSP* |
| Ga0099828_102550281 | 3300009089 | Vadose Zone Soil | EISPQASRGEPLPPPGETQLALQQLREAGFSEGQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDTWHEDMRREIGHHADAVREDMRREVGQHADTLREERRGAFAQQADLFRTTRPEPPRRRDVPLWLPTALLVLTAVGVILLVVYRFVSP* |
| Ga0099827_105151651 | 3300009090 | Vadose Zone Soil | MAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEQQALAQRLAQQLDAQREDTRREIGHHADALREDMRREVGQHADTLRAELRDALAQHAALLHTTRPEPPRWRDVLLWLITALLGLTAVGVILLVVHRFVGP* |
| Ga0099827_107001241 | 3300009090 | Vadose Zone Soil | VETQLAVQQLREAGFSADQQAALTTALLRVLALWTQQATRGDLHAEQQALAQQLDALHDDIRREVRQHADGVREELRDALAQHADVLHATRIEPPHRRDVLLWLITALLFLTTVGVVMLVIHSVVSP* |
| Ga0075418_106443841 | 3300009100 | Populus Rhizosphere | MERPQSVSAEALQRVPEEEPPPLPVDTQMAVQQLREAGFSADQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDAGHADMRREIGHHAEAIREDMRREVGQHADTLREELRGAFAQQADLFRTTRLEPPRQRDVPRWLFTVLLALTAVGVSLLVVGRFVSP* |
| Ga0066709_1004968732 | 3300009137 | Grasslands Soil | METQMAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALTQRLAQQLDALREDTRREIGHHADALREDMRREVGQHADTVRAELRDALAQHAALLHTTRPEPPRWRDGLLWLSTALLGLTAVGVILLVVSRFVGP* |
| Ga0066709_1006787261 | 3300009137 | Grasslands Soil | QMAVQQLREAGFSEDQQAALTTALLRVLALWTQQATREDLHAEQEALAQRLAQQLDALHEDIRREVGQHTDAVREELRDAFAQHADVLHATRIEPLRWRDVLLWLITALLVLTTVGVALLVIHGVVSP* |
| Ga0114129_119147741 | 3300009147 | Populus Rhizosphere | MTDPVERPQASQDERPLQETQGERLTPPGETQLAIQQLREAGFSEGQQAALTTALLRVLALWTQQATRGDLHAEHQALAQHLAQQLDAWHEDMRREIGHHADAVREDMRREVGQHADTLREELRGAFAQQADVFRTARPEPPRQRDVPRWLTTALLVLTAVGVILLVVSRWFCRKFAFLRPNVKVVCRKIN* |
| Ga0105084_10659291 | 3300009811 | Groundwater Sand | METQMAVQQLREAGFSEDQQDALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDALHEDTRREIGQHADVVREELRDAFAQHADVLHATRLEPPHRRDVMLWLITALLFLTTVGVALLVVHSVVSP* |
| Ga0105064_10113673 | 3300009821 | Groundwater Sand | MAVQQLREAGFSEDQQAVLTTALLRVLALWTQQATREDLHAEHQALAQRLAQQLDALHEDTRREIGQHADVVREELRDAFAQHADVLHATRLEPPHRRDVLLWLITALLFLTTVGVALLVVHSVVSP* |
| Ga0105064_10348311 | 3300009821 | Groundwater Sand | MAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALAQHLAQQLDARHEDTRRDIGHHADALREDLRREVGQHADTLRAELRDAFAQHAALLHPTRPEPPRWRDVLLWLSTALLGLTAVGVILLVVSRFVGP* |
| Ga0105068_10518901 | 3300009836 | Groundwater Sand | METHMAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDALHEDTRREIGQHADVVREELRDAFAQHADVLHATRLEPPHRRDVLLWLITALLFLTTVGVALLVVHSVVSP* |
| Ga0105058_11262481 | 3300009837 | Groundwater Sand | MAVQQLREAGFSEDQQAALTTALLRVLALWTQQATREDLHAEQQALAQRLTQQLDALHEDIRREVGQHADAVREELRDAFAQHADVLHATRIEPPRRRDVLLWLITALLFLTTVGVALLVIHSVVSP* |
| Ga0127452_10305881 | 3300010119 | Grasslands Soil | MAVQQLREAGFSEDQQAALTTALLRVLALWTQQATREDLHAEQQALAQRLAQQLDALHEDIRREVGQHTDAVREELRDAFAQHADVLHATRIEPLRWRDVLLWLITALLVLTTVGV |
| Ga0134071_106092342 | 3300010336 | Grasslands Soil | RVLALWTQQATRGDLHAEHQALAQRLAQQLDALREDTRREIGHHADALREDMRREVGQHADTLRAELRDALAQHAALLHTTRPEPPRWRDVLLWLSTALLGLTVVGVILLVVSRFVGP* |
| Ga0126372_103563221 | 3300010360 | Tropical Forest Soil | MTDPMERPQSVSDEALQHVPEEEPPPLPVDTQMAVQQLREAGFSADQQAALTSALLHVLALWTQQATRGDLHAEHQALAQRLAQQLDTWHEDIRREIGHHADAIREDMRREVGQHADTLREELRGAFAQQADLFRTTRPEPPRQRDVPRWLLTALLALTAVGVSLLVVARFVSP* |
| Ga0134128_112936422 | 3300010373 | Terrestrial Soil | ESRGEPLPPPEETQLALQQLREAGFSEGQQAALTTALLRVLALWTQQATRGDLHAEHQALAQQLDAWHEDIRREIGHHADAVREDMRREVGQHADTLREELRGAFAQQADLFRTTRPEPPRRRDVPLWLPTALLVLTAVGVILLVVYRFMSP* |
| Ga0137391_100368054 | 3300011270 | Vadose Zone Soil | MAVQQLREAGFSADQQAALTTALLRVLALWTQQATRGDLHAEQQALAQQLDALHDDIRREVRQHAEGVRAELRDALAQHADVLHATRIEPPHRREVLLWLITALLFLTTVGVVMLVIHSVVSP* |
| Ga0137391_108223001 | 3300011270 | Vadose Zone Soil | AVQQLREAGFSEDQQAALTTALLRVLALWTQQTTRGDLHAEHQALAQQLDAWHADMRREIGHHADAVREDMRREVGQHADTLREELRGAFAQQADLFHTTRPEPPRQRDVPLWLTTALLVLTAAGVILLVVSRFMSP* |
| Ga0137383_103281523 | 3300012199 | Vadose Zone Soil | MAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEQQALAQRLAQQLDTLREDTRRDIGHRADALREDMCREVGQHTEALRKEMRSAFAQQADLLHTTHIAPPRRRDVLLWLITALLGITAVGVILLVVSRFVGP* |
| Ga0137383_104244622 | 3300012199 | Vadose Zone Soil | LRVLALWTQQATRGDLHAEHQALALRLAQQLDAWHEDMRREIGHHADAIREDMRREVGQHTDTLREELRGAFAQQADLFRTARPEPPRQRDVPRWLTTALLVLTAIGVILLVVDRFVRP* |
| Ga0137365_102431763 | 3300012201 | Vadose Zone Soil | METQMAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDALREDTRREIGHHADALREDMRREVGQHADTLRAELRDALAQHAALLGLTAVGVILLVVSRFVGP* |
| Ga0137363_109847441 | 3300012202 | Vadose Zone Soil | MAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDALREDTRREIGHHADALREDMRREVGQHADTLRAELRDALAQHAALLHTTRPEPPRWRDVLLWLITALLGLTAVGVILLVVSKFVGP* |
| Ga0137374_102254302 | 3300012204 | Vadose Zone Soil | MAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEQQALAQRLAQQLDALREATRREIGHHAEALREDMRREVGQHTEALREDMRSAFAQQADLLHTTHIAPPCRRDVLLWLSTALLGLTAVGVILLVVSRFVGP* |
| Ga0137374_103125073 | 3300012204 | Vadose Zone Soil | MTEPVEKPQVSQDEAPPQDAGGEHLTVPMETQMAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDALREDTRRDIGHHADALREDMRREVGQHADTLRAEMHDAFAQHAALLHTTRPESPRWRDVLLWLSTALLGLTAVGVILLVVSRFVGP* |
| Ga0137380_104793582 | 3300012206 | Vadose Zone Soil | MAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEQQALAQRLAQQLDALREDTRRDIGHHADALREDMRREVGQHADTVRAELRDALAQHAALLHTTRPESPRWRDVLLWLSTALLGLTAVGVILLVVSRFVGP* |
| Ga0137381_103595231 | 3300012207 | Vadose Zone Soil | MAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDALREDTRREIGHHADALREDMRREVGQHADTVRAELRDALAQHAALLHTTRPESPRWRDVLLWLITALLVLTTVGVALLVIHSVVSP* |
| Ga0137379_104351373 | 3300012209 | Vadose Zone Soil | EDQQAALTTALLRVLALWTQQATRGDLHAEQQALAQRLAQQLDALREATRREIGHHAEALREDMRREVGQHTEALREDMRSAFAQQADLLHTTHIAPPCRRDVLLWLSTALLGLTAVGVILLVVSRFVGP* |
| Ga0137378_104174021 | 3300012210 | Vadose Zone Soil | METQMAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDALREDTRRDIGHHADALREDMRREVGQHADTLRAELRDALAQHAALLHTTRPEPPRWRDVLLWLSTALLGLTAVGVILLVVSRFVSP* |
| Ga0137377_100735487 | 3300012211 | Vadose Zone Soil | METQMAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALTQRLAQQLDALREDTRREIGHHADALREDMRREVGQHADTVRAELRDALAQHAALLHTTRPEPPRWRDVLLWLSTALLGLTAVGVILLVVSRFVGP* |
| Ga0137377_110307351 | 3300012211 | Vadose Zone Soil | VLALWTQQATRGDLHAEQQALAQRLAQQLDTLREDTRRDIGHRADALREDMCREVGQHTEALRKEMRSAFAQQADLLHTTHIAPPRRRDVLLWLITALLGLTAVGVILLVVSRFVGP* |
| Ga0150985_1021516931 | 3300012212 | Avena Fatua Rhizosphere | QQLREAGFSEGQQAALTTALLRLLALWTQQATRGDLHAEHQALAQRLAQQLDAWHADMRREIGHHADAVREDMCREVGQHADTLREELRSAFAQQADLFRTTRPEPPRQRDVPLWLTTALLVLTAVGVILLVVSRFVSP* |
| Ga0137387_101408252 | 3300012349 | Vadose Zone Soil | MAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEQQALAQRLAQQLDALREDTRREIGHHADALREDMRREVGQHTDALCEDMRSAFAQQADLLHTTHIAPPRRRDVLLWLSTALLGLTAVGVILLVVSRFVGP* |
| Ga0137372_102759871 | 3300012350 | Vadose Zone Soil | EAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDALREDTRRDIGHHADALREDMRREVGQHADTLRAEMHDAFAQHAALLHTTRPESPRWRDVLLWLSTALLGLTAVGVILLVVSRFVGP* |
| Ga0137386_101042872 | 3300012351 | Vadose Zone Soil | MAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDALREDTRREIGHHADALREDMRREVGQHTDALCEDMRSAFAQQADLLHTTHIAPPRRRDVLLWLSTALLGLTAVGVILLVVSRFVGP* |
| Ga0137367_101723932 | 3300012353 | Vadose Zone Soil | MTEPVERPQVSQDEGPPQDAGGEHLTVPIETQMAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDALREDTRRDIGHHADALREDMRREVGQHADTLRAEMHGAFAQHAALLHTTRPESPRWRDVLLWLITALLGLTAVGVILLVVSRFVGP* |
| Ga0137369_101708131 | 3300012355 | Vadose Zone Soil | LTTALLRVLALWTQQATRGDLHAEHQALAQRLVQQLDALHEDTRRDIGHHADALREDMRREVGQHADTLRAALRDALAQHAALLHTTRPESPRWRDVLLWLSTALLGLTAVGVILLVVSRFVGP* |
| Ga0137371_100626125 | 3300012356 | Vadose Zone Soil | METQMAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALTQRLAQQLDALREDTRREIGHHADALREDMRREVGQHADTLRAELRDALAQHAALLHTTRPEPPRWRDGLLWLSTALLGLTAVGVILLVVSRFVGP* |
| Ga0137385_101334843 | 3300012359 | Vadose Zone Soil | MAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEQQALAQRLAQQLDALREATRREIGHHAEALREDMRREVAQHTEALREDMRREVAQQADLLHTTHIAPPRRRDVLLWLSTALLGLTAVGVILLVVSRFVGP* |
| Ga0137375_105464222 | 3300012360 | Vadose Zone Soil | REAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEQQALAQRLAQQLDALREATRREIGHHAEALREDMRREVGQHTEALREDMRSAFAQQADLLHTTHIAPPCRRDVLLWLSTALLGLTAVGVILLVVSRFVGP* |
| Ga0137360_106201902 | 3300012361 | Vadose Zone Soil | MAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDALREDTRRDIGHHADALREDMRREVGQHADALRTELRDTLAQHAALLHTTRPEPPRWRDVLLWLITALLGLTAVGVILLVVSRFVGP* |
| Ga0137361_104025392 | 3300012362 | Vadose Zone Soil | MAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEQQALAQRLAQQLDALREDTRREIGHHADALREDMRREVGQHADTLRAELRDALAQHAALLHTTRPEPPRWRDVLLWLSTALLGLTAVGVILLVVSRFVGP* |
| Ga0134055_11153731 | 3300012401 | Grasslands Soil | MTDPIDRPYASQDEIPSQDTRGEHLTVPVETQMAVQQLREAGFSEDQQAALTTALLRVLALWTQQATREDLHAEQQALAQRLAQQLDALREDTRREIGHHADALREDMCREVGQHTEALRKEMRSAFAQQADLFHTTRPEPPRQRDVPLWLTTALLVLTAVGVILLVVSRF |
| Ga0134060_10607641 | 3300012410 | Grasslands Soil | MAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDALREDTRREIGHHADALREDMRREVGQHADTVRAELRDALAQHAALLHTTRPESPRWRDVLLWLITALLGLTAV |
| Ga0150984_1074307311 | 3300012469 | Avena Fatua Rhizosphere | MTDPVERSQASQDERPPQESGGGPLPLPGETQLAIQQLREAGFSEGQQAALTTALLRLLALWTQQATRGDLHAEHQALAQRLAQQLDAWHADMRREIGHHADAVREDMCREVGQHADTLREELRSAFAQQADLFHTTRPEPPRQRDVPRWLTTALLVLTAVGVILLVVSRFMSP* |
| Ga0137373_100593831 | 3300012532 | Vadose Zone Soil | VNQDAVPPQETRGEHQPLPVETPMAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLVQQLDALHEDTRRDIGHHADALREDMRREVGQHADTLRAALRDALAQHAALLHTTRPESPRWRDVLLWLSTALLGLTAVGVILLVVSRFVGP* |
| Ga0137373_104667342 | 3300012532 | Vadose Zone Soil | GFSEDQQAALTTALLRVLALWTQQATRGDLHAEQQALAQRLAQQLDALHEDTRREIGHHAEALREDMRREVGQHTEALREDMRSAFAQQADLLHTTHIAPPCRRDVLLWLSTALLGLTAVGVILLVVSRFVGP* |
| Ga0137358_109225981 | 3300012582 | Vadose Zone Soil | MAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEQQALAQRLAQQLDALREDTRREIGHHADALREDMRREVGQHTEALHEEMRSAFAQQADLLHTTYIAPPRRRDVLLWLSTALLGLTAVGVILLVVSKFVGP* |
| Ga0137394_111854291 | 3300012922 | Vadose Zone Soil | MAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDALREDTRRDIGHHADALREDMRREVGQHADTVRAEMHDAFAQHAALLHTTRPESPRWRDVLLWLSTALLGLTAVGVILLVVSRFVGP* |
| Ga0137404_113280831 | 3300012929 | Vadose Zone Soil | MAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDALREDTRREIGHHADTLRAALRDALAQHAALLHTTRPESPRWRDVLLWLSTALLGLTAVGVILLVVSRFVGP* |
| Ga0137407_101539411 | 3300012930 | Vadose Zone Soil | LRVLALWTQQATRGDLHAEHQALAQRLAQQLDALREDTRREIGHHADALREDMRREVGQHADTLRAELRDALAQHAALLHTTRPEPPRWRDVLLWLSTALLGLTAVGVILLVVSRFVGP* |
| Ga0126369_110968841 | 3300012971 | Tropical Forest Soil | VETERALQQLRAAGFSDDQQTALTTALLRVLALWTQQATRGDVQAEHQALAQRLASQLDARQEDLRRDIGHHADALREDLRREVGQHATALREELRGEFVRQAELLQITRAAPARRWDGPLWLLTALLGLTCVGVLLLVVSRVLGW* |
| Ga0134077_100890042 | 3300012972 | Grasslands Soil | METQMAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDALREDTRREIGHHADALREDMRREVGQHADTLRAELRDALAQHAALLHTTRPEPPRWRDVLLWLSTALLGLTAVGVILLVVSRFVGP* |
| Ga0137405_11562882 | 3300015053 | Vadose Zone Soil | MAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDALREDTRREIGHHADALREDMRREVGQHADTLRAELRDALAQHAALLHTTRPEPPRWRDVLLWLSTALLGLTAVGVILLVVSRFVGP* |
| Ga0137403_100562455 | 3300015264 | Vadose Zone Soil | MAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDALREDTRREIGHHADALREDMRREVGQHADTLRAELRDALAQHAALLHTTRPESPRWRDVLLWLSTALLGLTAVGVILLVVSRFVGP* |
| Ga0134073_103744211 | 3300015356 | Grasslands Soil | MAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDALREDTRREIGHHADALREDMRREVGQHADTVRAELRDALAQHAALLHTTRPEPPRWRDGLLWLSTA |
| Ga0134089_102699361 | 3300015358 | Grasslands Soil | MTDPIDRPYASQDEIPSQDTRGEHLTVPVETQMAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALTQRLAQQLDALREDTRREIGHHADALREDMRREVGQHADTLRAELRDALAQHAALLHTTRPEPPRWRDVLLWLSTALLGLTVVGVILLVVSRFVGP* |
| Ga0134083_101987571 | 3300017659 | Grasslands Soil | MTEPVERPHENPDAVPPQETRGEHQPLPVETHMAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEQQALAQRLAQQLDALREDTRRDIGHHADALREDMRREVGQHADTLRAELRDALAQHAALLHTTRPEPPRWRDVLLWLSTALLGLTAVGVILLVVSRFVGP |
| Ga0184621_101024122 | 3300018054 | Groundwater Sediment | MTEPVERPHASQDEGPPPEPRGEPLPLPVETHMAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAPQLDALREDTRREIGHHADALREDMRREVGQHADTLRAELRDAFAQHAALLHPTRPEPPRWRDGLLWLSTALLG |
| Ga0184646_14215252 | 3300019259 | Groundwater Sediment | MTEPVERPHASQDEGPPPEPRGEPLLLPMETHMAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDARHEDTRRDIGHHADALREDMRREVGQHADTLRAELRDAFAQHAALLHPTRPEPPRWRDE |
| Ga0242665_101380782 | 3300022724 | Soil | MTDPVERPQASHDEMPPQASRREPLPPPEATQLALQQLREAGFSEGQQAALTTALLRVLALWTQQATRGDLHAEHQALAQQLDAWHEDMRREIGHHADAVREDMRREVGQHADTLREELRGAFAQQADLFRTTRPELPRRRDVPLWLTTALLVLTAVGVILLVVSRFVSP |
| Ga0207684_115448601 | 3300025910 | Corn, Switchgrass And Miscanthus Rhizosphere | AGFSDDQQAALATALLRVMALWTQQVTRGDLHAEQQALGQRLAQQLDARHEDMRRDIGHHADALREDMRREVGHHADTLRAELRDAFAQHAALLHTTRPEPPRWRDVLLWLITALLGLTAGGVILLVVHRFVGP |
| Ga0209803_11704501 | 3300026332 | Soil | HQHLCFFEGDAMTDPVERSQASQDEMPPQESCGGPLPLPGETQLAIQQLREAGFSEGQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDAWHADMRREIGHHADAVREDMCREVGQHADTLREELRSAFAQQADLFHTTRPEPPRQRDVPLWLTTALLVLTAVGVILLVVSRFVSP |
| Ga0209577_107322071 | 3300026552 | Soil | MTDPVERSQASQDEMPPQESCGGPLPLPGETQLAIQQLREAGFSEGQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDAWHADMRREIGHHADAVREDMCREVGQHADTLREELRSAFAQQADLFHTTRPEPPRQRDVPLWLTTALLVLTAVGVILLVVSRFVSP |
| Ga0209899_10589672 | 3300027490 | Groundwater Sand | MTDPIDRPHTNQNEVPSQETSGEPLTVPVETQMAVQQLREAGFSEDQQAALTTALLRVLALWTQQATREDLHAEHQALAQRLAQQLDALHEDTRREIGQHADVVREELRDAFAQHADVLHATRLEPPHRRDVLLWLIT |
| Ga0209843_10198832 | 3300027511 | Groundwater Sand | MTDPIDRPHPSQDEVPSQETRGEPLTVPVETQMAVQQLREAGFSEDQQAVLTTALLRVLALWTQQATREDLHAEHQALAQRLAQQLDALHEDTRREIGQHADVVREELRDAFAQHADVLHATRLEPPHRRDVLLWLITALLFLTTVGVALLVVHSVVSP |
| Ga0209843_10748002 | 3300027511 | Groundwater Sand | GFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALAQHLAQQLDARHEDTRRDIGHHADALREDLRREVGQHADTLRAELRDAFAQHAALLHPTRPEPPRWRDVLLWLSTALLGLTAVGVILLVVSRFVGP |
| Ga0209388_10838312 | 3300027655 | Vadose Zone Soil | MTEPVERPHASQDTGPPPETRGEHQPLPVETHMAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDALREDTRRDIGHHADALREDMRREVGQHADTVRAEMHDAFAQHAALLHTTRPESPRWRDVLLWLSTAL |
| Ga0209689_10792763 | 3300027748 | Soil | DQQAALTTALLRGLALWTQQATRGDLHAEHQALTQRLAQQLDALREDTRREIGHHADALREDMRREVGQHADTVRAELRDALAQHAALLHTTRPEPPRWRDGLLWLSTALLGLTAVGVILLVVSRFVGP |
| Ga0209590_101036952 | 3300027882 | Vadose Zone Soil | MTDPVERPQASHDEISPQASRGEPLPPPGETQLALQQLREAGFSEGQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDTWHEDMRREIGHHADAVREDMRREVGQHADTLREELRGAFAQQADLFRTTRPEPPRRRDVPLWLPTALLVLTAVGVILLVVYRFVSP |
| Ga0209590_108843691 | 3300027882 | Vadose Zone Soil | QPLREAGFSADQQAALTTALLRVLALWTQQATRGDLHAEQQALAQQLDALHDDIRREVRQHAEGVRAELRDALAQHADVLHATRIEPPHRRDVLLWLITALLFLTTVGVVMLVIHSVVSP |
| Ga0209382_117763081 | 3300027909 | Populus Rhizosphere | MTDPVERPKTSQDEIPPQEICGEPLPPPGETQLAIQQLREAGFSEGQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDAWHEDMRREIGHHADAVREELRGALAQQADLLHTTRSEPSRRRDVLLWLNT |
| Ga0209889_10528741 | 3300027952 | Groundwater Sand | MTEPVERPHASQDEGPPPEPRGEPLLLPVETHMAVQQLREAGFSEDQQAALTTALLRVLALWTQQATQGDLHAEHQALAQRLAQQLDALREDTRRDIGHHADALREDMRREVGQHADTLRAELRDAFAQHAALLHPTRPEPPRWRDVLLWLSTALLGLTAVGVILLVVHRFVGP |
| Ga0209853_11082802 | 3300027961 | Groundwater Sand | MTEPVERPHASQDEGSPPEPRGEPLLLPMETHMAVQQLREAGFSEDQQAALTTALLRVLALWTQQATREDLHAEQQALAQRLAQQLDALHEDIRREVGQHADAVREELRDAFAQHADVLHATRIEPLRWRDVLLWLITAL |
| Ga0209853_11411822 | 3300027961 | Groundwater Sand | MTDPIDRPHPSQDEVPSQETRGEPLTVPVETQMAVQQLREAGFSEDQQAVLTTALLRVLALWTQQATREDLHAEHQALAQRLAQQLDALHEDTRREIGQHADVVREELRDAFAQHADVLHATRLEPPHRRDVLLWLITALLFLTTVGVALLVVHSVV |
| Ga0307282_106692771 | 3300028784 | Soil | MTEPVERPHASQDEGPPPEPRGEPLLLPMETHMAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDALREDTRRDIGHHADALREDMRREVGQHADTLRAELRDALAQHAALLHTSRPEPPRWRDGLLWLSTALLGLTAVG |
| Ga0308203_10326281 | 3300030829 | Soil | MAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDALREDTRREIGHHADALREDMRREVGHHADTLRAELRDAFAQHAALLHTTRPVPPRWRDVPLWLITALLGLTAVGVILLVVSRFVGS |
| Ga0308205_10197612 | 3300030830 | Soil | MTAPSDRPQASQDEVPSRETSGVPLTGPVETQMAVQQLREAGFSADQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDAWHEDMRRAIGHHADAVREDMRREVGQHADTLREELRGAFAQQADLLHTTRPAPPRWRDVPLWLIMALLVLTAVGVILLVVSRFVGP |
| Ga0308202_10750972 | 3300030902 | Soil | MTAPSDRPQASQDEVPSRETSGVPLTGPVETQMAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDAWHADMRREIGHHADAVREDMRREVGQHADTLREELRGAFAQQADLFHTTRPEPPRQRDVPRWLTTALLVLTAVGVILLVVSRFMSP |
| Ga0308178_10295172 | 3300030990 | Soil | MTEPVERPHASQDEGPPPEPRGEPLLLPMETHMAAQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALAQHLAQQLDARHEDTRRDIGHHADALREDMRREVGQHADTVRAEMHDAFAQHAALLHTTHPESPRWRDVLLWLSTALLGLTAVGVILLVVSRFVGP |
| Ga0308204_102136281 | 3300031092 | Soil | MTEPVERPHANQDEVSPPEPRGEPLLLPVETQMAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDARYEDTRREIGHHADALREDMRREVGQHAALLHTTRLAPPRWRDVLLWLSTALLALTTV |
| Ga0370546_008936_150_578 | 3300034681 | Soil | MAVQQLREAGFSEDQQAALTTALLRVLALWTQQATRGDLHAEHQALAQRLAQQLDVLREDTRRDIGHHADALREDMRREVGQHADTLREEMRGAFAQHAALLHTTRPEPPRWRDVLLWLSTALLGLTAVGVILLVVSRFVGP |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |