Metagenome / Metatranscriptome Family F080732

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080732
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	50 residues
Representative Sequence	MTPDQLRGAARNLAHGLGIPVYIRDGRIYQNGPGLAFLPPNGDPA
Number of Associated Samples	74
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.07 %
% of genes near scaffold ends (potentially truncated)	93.86 %
% of genes from short scaffolds (< 2000 bps)	88.60 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.228 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (53.509 % of family members)
Environment Ontology (ENVO)	Unclassified (81.579 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.877 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.55% β-sheet: 10.96% Coil/Unstructured: 68.49%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF13975	gag-asp_proteas	7.89
PF04964	Flp_Fap	3.51
PF13650	Asp_protease_2	1.75
PF00300	His_Phos_1	1.75
PF05899	Cupin_3	0.88
PF00239	Resolvase	0.88
PF01555	N6_N4_Mtase	0.88
PF13561	adh_short_C2	0.88
PF13463	HTH_27	0.88
PF00512	HisKA	0.88
PF02321	OEP	0.88
PF09190	DALR_2	0.88
PF05598	DUF772	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	3.51
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.75
COG0215	Cysteinyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.88
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.88
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.88
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.88
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.88
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.23 %
Unclassified	root	N/A	8.77 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.23 %
Unclassified	root	N/A	8.77 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.23 %
Unclassified	root	N/A	8.77 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	89.47 %
Unclassified	root	N/A	8.77 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	86.84 %
Unclassified	root	N/A	8.77 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	82.46 %
Unclassified	root	N/A	8.77 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	82.46 %
Unclassified	root	N/A	8.77 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_101641573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	541	Open in IMG/M
3300005167\|Ga0066672_10214971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1229	Open in IMG/M
3300005363\|Ga0008090_15814078	All Organisms → cellular organisms → Bacteria → Proteobacteria	1390	Open in IMG/M
3300005435\|Ga0070714_100683527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	989	Open in IMG/M
3300010361\|Ga0126378_10295924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1721	Open in IMG/M
3300010376\|Ga0126381_101074652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1162	Open in IMG/M
3300016270\|Ga0182036_10327455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1174	Open in IMG/M
3300016270\|Ga0182036_11216842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	627	Open in IMG/M
3300016341\|Ga0182035_11250873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	664	Open in IMG/M
3300016357\|Ga0182032_10785389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	804	Open in IMG/M
3300016371\|Ga0182034_10188724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1584	Open in IMG/M
3300016371\|Ga0182034_10674741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	877	Open in IMG/M
3300016371\|Ga0182034_11790680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	541	Open in IMG/M
3300016371\|Ga0182034_11965876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	517	Open in IMG/M
3300016387\|Ga0182040_10805739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	774	Open in IMG/M
3300016387\|Ga0182040_10886316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	739	Open in IMG/M
3300016387\|Ga0182040_11063453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	677	Open in IMG/M
3300016404\|Ga0182037_10108181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2017	Open in IMG/M
3300016404\|Ga0182037_10316575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1260	Open in IMG/M
3300016404\|Ga0182037_10864138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	783	Open in IMG/M
3300016404\|Ga0182037_10871848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	779	Open in IMG/M
3300016445\|Ga0182038_10906764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	777	Open in IMG/M
3300016445\|Ga0182038_11274778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	656	Open in IMG/M
3300020580\|Ga0210403_10337503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1233	Open in IMG/M
3300020580\|Ga0210403_10775681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	763	Open in IMG/M
3300020582\|Ga0210395_10972892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	629	Open in IMG/M
3300021171\|Ga0210405_10531699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	920	Open in IMG/M
3300021403\|Ga0210397_10518366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	904	Open in IMG/M
3300021404\|Ga0210389_10105719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2169	Open in IMG/M
3300021432\|Ga0210384_10983516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	745	Open in IMG/M
3300021478\|Ga0210402_11054938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	740	Open in IMG/M
3300025915\|Ga0207693_10126497	All Organisms → cellular organisms → Bacteria	2009	Open in IMG/M
3300026312\|Ga0209153_1046526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1528	Open in IMG/M
3300027610\|Ga0209528_1025929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1294	Open in IMG/M
3300027737\|Ga0209038_10014813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2285	Open in IMG/M
3300031231\|Ga0170824_116040949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	578	Open in IMG/M
3300031543\|Ga0318516_10395017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	797	Open in IMG/M
3300031545\|Ga0318541_10069923	Not Available	1838	Open in IMG/M
3300031545\|Ga0318541_10421265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	746	Open in IMG/M
3300031546\|Ga0318538_10731367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	537	Open in IMG/M
3300031549\|Ga0318571_10158136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	787	Open in IMG/M
3300031561\|Ga0318528_10016674	All Organisms → cellular organisms → Bacteria → Proteobacteria	3444	Open in IMG/M
3300031561\|Ga0318528_10392201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	745	Open in IMG/M
3300031561\|Ga0318528_10442508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	698	Open in IMG/M
3300031572\|Ga0318515_10093074	All Organisms → cellular organisms → Bacteria	1574	Open in IMG/M
3300031668\|Ga0318542_10500783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	631	Open in IMG/M
3300031681\|Ga0318572_10067127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1966	Open in IMG/M
3300031719\|Ga0306917_10254510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1346	Open in IMG/M
3300031723\|Ga0318493_10400543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	751	Open in IMG/M
3300031724\|Ga0318500_10088503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1391	Open in IMG/M
3300031744\|Ga0306918_10664810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	815	Open in IMG/M
3300031744\|Ga0306918_11097784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	616	Open in IMG/M
3300031744\|Ga0306918_11549585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	506	Open in IMG/M
3300031763\|Ga0318537_10250905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	656	Open in IMG/M
3300031771\|Ga0318546_10624539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	758	Open in IMG/M
3300031771\|Ga0318546_10810807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	659	Open in IMG/M
3300031777\|Ga0318543_10313184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	702	Open in IMG/M
3300031781\|Ga0318547_10414372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	828	Open in IMG/M
3300031782\|Ga0318552_10720868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300031792\|Ga0318529_10513990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	557	Open in IMG/M
3300031793\|Ga0318548_10161277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1095	Open in IMG/M
3300031833\|Ga0310917_10438157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	889	Open in IMG/M
3300031835\|Ga0318517_10412519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	610	Open in IMG/M
3300031835\|Ga0318517_10462482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	572	Open in IMG/M
3300031845\|Ga0318511_10209269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	868	Open in IMG/M
3300031879\|Ga0306919_10311137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1197	Open in IMG/M
3300031879\|Ga0306919_10693481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	784	Open in IMG/M
3300031879\|Ga0306919_11028305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	629	Open in IMG/M
3300031890\|Ga0306925_11056953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	824	Open in IMG/M
3300031890\|Ga0306925_11599464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	634	Open in IMG/M
3300031890\|Ga0306925_12197521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	513	Open in IMG/M
3300031896\|Ga0318551_10784895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	553	Open in IMG/M
3300031897\|Ga0318520_11088460	Not Available	506	Open in IMG/M
3300031910\|Ga0306923_10630189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1200	Open in IMG/M
3300031910\|Ga0306923_11120988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	846	Open in IMG/M
3300031912\|Ga0306921_10123971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3012	Open in IMG/M
3300031912\|Ga0306921_10297778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1889	Open in IMG/M
3300031912\|Ga0306921_10747835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1120	Open in IMG/M
3300031912\|Ga0306921_11589447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	711	Open in IMG/M
3300031941\|Ga0310912_10287368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1271	Open in IMG/M
3300031941\|Ga0310912_11124167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	600	Open in IMG/M
3300031945\|Ga0310913_10738540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	695	Open in IMG/M
3300031954\|Ga0306926_11511172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	774	Open in IMG/M
3300031981\|Ga0318531_10124848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1144	Open in IMG/M
3300032001\|Ga0306922_12245667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	525	Open in IMG/M
3300032041\|Ga0318549_10075604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1436	Open in IMG/M
3300032051\|Ga0318532_10299436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	571	Open in IMG/M
3300032054\|Ga0318570_10369070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	654	Open in IMG/M
3300032054\|Ga0318570_10558288	Not Available	522	Open in IMG/M
3300032055\|Ga0318575_10467752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	640	Open in IMG/M
3300032059\|Ga0318533_10109503	All Organisms → cellular organisms → Bacteria → Proteobacteria	1921	Open in IMG/M
3300032059\|Ga0318533_10502055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	889	Open in IMG/M
3300032060\|Ga0318505_10038194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2002	Open in IMG/M
3300032066\|Ga0318514_10697082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	540	Open in IMG/M
3300032068\|Ga0318553_10243135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	940	Open in IMG/M
3300032068\|Ga0318553_10404010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	715	Open in IMG/M
3300032076\|Ga0306924_10437373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1495	Open in IMG/M
3300032076\|Ga0306924_10786013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1062	Open in IMG/M
3300032090\|Ga0318518_10594472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	565	Open in IMG/M
3300032091\|Ga0318577_10509621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	573	Open in IMG/M
3300032261\|Ga0306920_102150574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	777	Open in IMG/M
3300032261\|Ga0306920_103626047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	568	Open in IMG/M
3300033158\|Ga0335077_11243094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	727	Open in IMG/M
3300033289\|Ga0310914_11270123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	638	Open in IMG/M
3300033290\|Ga0318519_10101987	Not Available	1546	Open in IMG/M
3300033290\|Ga0318519_10285151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	964	Open in IMG/M
3300033290\|Ga0318519_10443261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	777	Open in IMG/M
3300033290\|Ga0318519_10509057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	726	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.12%
Aquatic	Environmental → Aquatic	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.12%
Freshwater	Environmental → Aquatic → Freshwater	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	94.74%
Loam	Environmental → Terrestrial → Soil → Loam	3.51%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.88%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	90.35%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.75%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.88%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	53.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.75%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.88%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1016415732	3300002245	Forest Soil	MTPHELADAARNLAHALGITVYIRDGRIYQHGPGVEVLPPPGAHPT
Ga0066672_102149712	3300005167	Soil	MTPHELADAARNLAHALGITVYIRDGRIYQHGPGVEILPPPGACPT
Ga0008090_158140783	3300005363	Tropical Rainforest Soil	MTPDQLRGAARNLARGLGIPVYIRDGRIYQDGPGLAFLPPNGDPAVAEV
Ga0070714_1006835271	3300005435	Agricultural Soil	MTSDELADAARNLAHALGIAVYIRDGRIYQHGPGIEILPPPG
Ga0126378_102959244	3300010361	Tropical Forest Soil	MTPAQLRGAARKLAYGRGIPVYIRDRRIYQDGPGLAFFPPNGDPAVAEVTLDQR
Ga0126381_1010746522	3300010376	Tropical Forest Soil	MTPEQLRHAARNLARGLGIPLYIRDGRIYQDGPGLAFLPPNGDPAVAEEEEVDAANGSLTVPQAFGF
Ga0182036_103274551	3300016270	Soil	MTPDQLADAARNLAYGLGIPVYVRDGRIYQNGPGLAFLPPSGTRPTVADAPF
Ga0182036_112168421	3300016270	Soil	MTPDQLRGATRNLAYGLGIAVYIRDDRIYQNGPGLAFLPPNGDPAVTEVP
Ga0182035_112508731	3300016341	Soil	MTPNQLANAARNLAYGLGIPLYVRDERIYQNGPGLAFLPPNGAPA
Ga0182032_107853892	3300016357	Soil	MTPDQLRRAARNLAYGLGIPFYIRDGRIYQFGPGLVFLPPNGDTEVAE
Ga0182034_101887243	3300016371	Soil	MTPDQLRGAARNLAYGLGIPVYIRDGRIYQDGPGRAFLPPNGDPAEAPFDQKEEVDAANESIT
Ga0182034_106747411	3300016371	Soil	MLNKGTTAMTPDQLCRAARNLAYGLGIPVYIRDGRIYQEGPGVAFLPLNGDPVVAEVP
Ga0182034_117906801	3300016371	Soil	MTPDQLRGATRNLAYGLGIAVYIRDDRIYQNGPGLAFLPPNGDPAV
Ga0182034_119658761	3300016371	Soil	MLSKGRSAMTPEQLRRAARNLAYGLGIPFYIRDGRIYQFGPGL
Ga0182040_108057391	3300016387	Soil	MNPDQLRGAARNLAYGLGIPVYIRDDRIYQNGPGLAFLPPNGDPPVTEVPFDQKEEAN
Ga0182040_108863162	3300016387	Soil	MTPNELADAARNLAYGLGIPVYVRDGRIYQNGPGLAFLPPSG
Ga0182040_110634532	3300016387	Soil	MTPDQLRRAARNLAYGLGIPFYIRDGRIYQFGPGL
Ga0182037_101081811	3300016404	Soil	MTPDQLRGATRNLAYGLGIAVYIRDDRIYQNGPGLAFLPPNGDPAVTEVPLDQEEEANTA
Ga0182037_103165752	3300016404	Soil	MTPDQLRGAARNLSYALGIPVYIRDGRIYQNGPGLAFLPPNGDPVVAKVPLDQEEEA
Ga0182037_108641381	3300016404	Soil	MTPAQLRGAARNLAYGLGIPVYIRDGRIYQDGPGLAFLPPNGDPAAAEVPLDQREEADAANG
Ga0182037_108718481	3300016404	Soil	MTPDQLRGAARNLAHGLGIPVYIRDGRIYQNGPGLAFLPPNGDPA
Ga0182038_109067642	3300016445	Soil	MTPDQLRGAARNLAYGLGITFYIRDDRIYQNGPGLAFLPPNGGPAV
Ga0182038_112747782	3300016445	Soil	MTPNQLASAARNLAYGLGIPVYVRDGRIYQAGPGLAFLPPNGDPAV
Ga0210403_103375031	3300020580	Soil	MTPDELADAARNLAHALGITVYIRDGRIYQHGPGIEVLPPP
Ga0210403_107756812	3300020580	Soil	MTPDELADAARNLAHALGITVYIRDGRIYQHGPGIEV
Ga0210395_109728922	3300020582	Soil	MTPEELADAARNLAHALGITVYIRDGRIYQHGPGVEI
Ga0210405_105316991	3300021171	Soil	MTPDALADAARNLAHALGITVYIRDGRIYQHGPGVEILPP
Ga0210397_105183662	3300021403	Soil	MTPDELADAARNLAHALGITVYIRDGRIYQHGPGI
Ga0210389_101057194	3300021404	Soil	MTPDELADAARNLAHALGITVYIRDGRIYQHGPGVEILPQPG
Ga0210384_109835161	3300021432	Soil	MTPEELADAARNLAHALGITVYIRDGRIYQHGPGVEILP
Ga0210402_110549382	3300021478	Soil	MTPNQLTSAARNLAYGLGIPVYVRDGRIYQNGPGLGFL
Ga0207693_101264973	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTPDQLTGAARDLAHGLGIPVYIRDGRIYQHGPGLAFLPPSSVRPAAGDASS
Ga0209153_10465261	3300026312	Soil	MTPHELADAARNLAHALGITVYIRDGRIYQHGPGVEILPPPGACPTT
Ga0209528_10259291	3300027610	Forest Soil	MTPDELADAARNLAHALGITVYIRDGRIYQHGPGIE
Ga0209038_100148131	3300027737	Bog Forest Soil	MTPAELADAARNLAHALGITVYIRDGRIYQHGPGIEILPP
Ga0222749_105797451	3300029636	Soil	MTPDELIGAARKLAHGLGIPVYIRDGRIYQRGPGTEFLPPNGVGPTVEEEGFFETDERG
Ga0170824_1160409492	3300031231	Forest Soil	MTPNQLASAARNLAYGLGIPVYVRDGRIYQHGPGLAFLPANGDPAVAEFPLDQKEE
Ga0318516_103950171	3300031543	Soil	MTPDQLRGAARNLSYALGIPVYIRDGRIYQNGPGLAFLPPNGDPVVAKV
Ga0318541_100699232	3300031545	Soil	MMTPDELSGAARNLAHGLGIPVYIRDGRIYQHGPGIEF
Ga0318541_104212652	3300031545	Soil	MTPDQLRGAARNLSYGLGIPVYIRDGRIYQNGPGLAFLPPNGDPVVAEVPLDQEEEADAALTMPK
Ga0318538_107313671	3300031546	Soil	MTPDQLRGAARNLSYGLGIPVYIRDGRIYQNGPGLAFLPPNGDPVVAKVPLDQEE
Ga0318571_101581361	3300031549	Soil	MTPDQLRGAARNLAHGLGIPVYIRDGRIYQNGPGLAFLPPNGDPAVPEVTLAHEPDIANASLTMPK
Ga0318528_100166747	3300031561	Soil	MPSRGKAVMTPDQLRGAARNLAYGLGIPVYIRDDRIYQNGAGLAFLPPNGDPPVTEVPFDQKEEAN
Ga0318528_103922011	3300031561	Soil	MTPDQLRGAARNLSYGLGIPVYIRDGRIYQNGPGLAFLPPNGDPVVAEV
Ga0318528_104425082	3300031561	Soil	MTPNELADAARNLAYGLGIPVYVRDGRIYQNGPGLAFLPPSGTR
Ga0318515_100930741	3300031572	Soil	MTPDQLRGAARNLAYGLGIPIYIRDDRIYQNGPGLAFLPPNGDPAVTEVPLDQ
Ga0318542_105007831	3300031668	Soil	TSAARNLAHGLGIPVYIRDGRIYQDGPGLVFLPSNGSRPTVADATSHGK
Ga0318572_100671275	3300031681	Soil	MPSRGKAVMTPDQLRGAARNLAYGLGIPVYIRDDRIYQNGPGLAFLPPNGDPPVTEVPFDQKE
Ga0306917_102545101	3300031719	Soil	MTPNQLRGAARNLAYGLGIPVYIRDGRICQDGPGLAFLPPNGDPAVAKV
Ga0318493_104005431	3300031723	Soil	MTPDQLRGAARNLAYGLGIPVYIRDGRIYQNGPGLAFLPPSGDPAVAEVPL
Ga0318500_100885034	3300031724	Soil	MTPDQLADAARNLAYGLGIPVYVRDGRIYQNGPGLAFLPPSGTRPTVADA
Ga0306918_106648103	3300031744	Soil	MTPDQLRGAARNLAYGLGIPVYIRDDRIYQNGPGLAFLPPNGDPPVTEVP
Ga0306918_110977841	3300031744	Soil	MTPDQLRGAARNLSYGLGIPVYIRDGRIYQNGPGLAFLPPNGDPVVAEVPLDQEEEADAALTMP
Ga0306918_112567742	3300031744	Soil	MLNKGTTAMTPDQLCRAARNLAYGLGIPVYIRGGRIYQEGPGAAFLPQNGDPAVAEV
Ga0306918_115495852	3300031744	Soil	MTPNQLAGAARNLAYGLGIPLYVRDGRIYQNGPGLAFLPPNGAPALAEVPLDQND
Ga0318537_102509052	3300031763	Soil	MTPDQLRGAARNLAYGLGIPVYIRDDRIYQNGPGLAFLPPNGDPAVAKVPLDQ
Ga0318546_106245393	3300031771	Soil	MTPDQLRGATRNLAYGLGIAVYIRDDRIYQNGPGLAFLPPNGDPAVTEVPL
Ga0318546_108108072	3300031771	Soil	MTPDQLRGAARNLAHGLGIPVYIRDGRIYQNGPGLAFLPPNGDPAVPEVTLAHEPDIANASLTMP
Ga0318546_110009311	3300031771	Soil	MTPDQLTGAARNLAHGLGIPVYIRDGRIYQDGPGVAFLPPSGARST
Ga0318543_103131841	3300031777	Soil	MTPDQLRVAARNLAYGLGIPFYIRDSRIYQDGPGLAFLPPNGDPAEAPFDQKE
Ga0318543_103656302	3300031777	Soil	MTPDQLTGAARNLAHGLGIPVYIRDGRIYQDGPGVAFLPPSGARSTVA
Ga0318547_104143721	3300031781	Soil	MTPDQLRGAARNLAFGLGIPVYIRDGRIYQDAPGLAFLPPNGDPAVAKVPLDQADA
Ga0318552_107208681	3300031782	Soil	MLSEGTGAMTPEQLCRAARNLAYGLGITVYIRDGKIYQFGPGLAFLPPNGDPEVAEVPRDNG
Ga0318529_105139902	3300031792	Soil	MTPDQLHRAARNLAYGLGIPFYIRDGRIYQFGPGLVFLPPNGDTEVAEIPLDIGSLT
Ga0318548_101612772	3300031793	Soil	MTPNELADAARNLAYGLGIPVYVRDGRIYQNGPGLA
Ga0310917_104381571	3300031833	Soil	MTPDQLRGAARNLARGLGIPFYIRDGRIYQDGPGLAFLPPNGD
Ga0318517_104125191	3300031835	Soil	MTPDQLRNAARNLAYGLDIPVYIRDGRIYQNGPGLAFLP
Ga0318517_104624821	3300031835	Soil	MTPDQLRGAARNLAYGLGIPVYIRDDRIYQNGPGLAFLPPNGDPPVTEVPLDQKEEAN
Ga0318511_102092691	3300031845	Soil	MTPDQLCRAARNLAYGLGIPVYIRDGRIYQEGPGVAFLPLNGDPVVAEV
Ga0306919_103111373	3300031879	Soil	MTPDQLRVAARNLAYGLGIPFYIRDSRIYQDGPGLAFLPPNGDPAEAPFDQKEE
Ga0306919_106934811	3300031879	Soil	MTPNQLRDAARNLAYGLGIPVYIRDGRICQDGPGLAFLPPNGDPAVAKV
Ga0306919_110283051	3300031879	Soil	MTPNELADAARNLAYGLGIPVYVRDGRIYQNGPGLAFLPPSGTRPTVADA
Ga0306925_110569531	3300031890	Soil	MTPNQLAGAARNLAYGLGIPLYVRDGRIYQNGPGLAFLPSNGAPAL
Ga0306925_115994642	3300031890	Soil	MTPDQLRRAARNLAYGLGIPFYIRDGRIYQFGPGLVFLPPNGDTEVAEIPL
Ga0306925_121975211	3300031890	Soil	MTPNQLRRAARNLAYGLGIPVYIRDGRIYQDGPGLAFLPPNGDLAAAEV
Ga0318551_107848951	3300031896	Soil	MMTPDELSGAARNLAHGLGIPVYIRDGRIYQHGPGIEFLPPKYDGAI
Ga0318520_110884602	3300031897	Soil	MTPNQLADAARNLAHGLGIPVYIRDGRLYQHGPSLPFLR
Ga0306923_106301891	3300031910	Soil	MLSEGTGAMTPEQLCRAARNLAYGLGITVYIRDGKIYQFGPGLAFLPPNGDPEVAEVPRDNGSLTLPK
Ga0306923_111209882	3300031910	Soil	MTPDQLRSAARNLSFGLGIPVYIRDGRIYQNGPGLAFLPPNGDPAVPEVPFAHEPDSANGSLTIAKA
Ga0306921_101239716	3300031912	Soil	MTPDQLRVAARNLAYGLGIPFYIRDSRIYQDGPGLAFLPPNGDPAEAP
Ga0306921_102977781	3300031912	Soil	MTPDQLRGAARNLSYALGIPVYIRDGRIYQDGPGLAFLPPKATQR
Ga0306921_107478351	3300031912	Soil	MTPDQLRGAARNLAYGLGIPFYIRDDRIYQNGPGFAFLPPNGGPAVT
Ga0306921_115894471	3300031912	Soil	MTSDQLTSAARNLAHGLGIPVYIRDGRIYQDGPGLVFLPSNGSRP
Ga0310912_102873681	3300031941	Soil	MTPNQLRGAARNLAYGLGIPFYIRDGRICQDGPGLAFLPPNGDPAVAKVPLDQKEEADAANG
Ga0310912_104657342	3300031941	Soil	MTPDQLRGAARNLAYGLGITFYIRDDRIYQNGPGLAFLPPNGGP
Ga0310912_111241672	3300031941	Soil	MLSKGRAAMTPDQLRGAARSLAYGLGIPVYIRDGRIYQDGPGLAFLPPNGDPTM
Ga0310913_107385401	3300031945	Soil	MTPDQLRRAARNLAYGLGITVYIRDGKIYQFGPGLAFLPPNGDPEAAEVPRDNGSLTMPK
Ga0306926_115111721	3300031954	Soil	MTPDQLRVAARNLAYGLGIPFYIRDSRIYQDGPGLAFLPPNGDPAEAPFDQKEEVDAANESITVP
Ga0318531_101248481	3300031981	Soil	MTPNELADAARNLAYGLGIPVYVRDGRIYQNGPGLAFLPPSGTRPT
Ga0306922_103226301	3300032001	Soil	MTPDQLRGAARNLSYALGIPVYIRDGRIYQEGPGLAFLPPN
Ga0306922_122456672	3300032001	Soil	MTPDQLRRAARNLAYGLGIPFYIRDGRIYQFGPGLV
Ga0318549_100756041	3300032041	Soil	MTPDQLRGAARNLAYGLGIPVYIRDGRIYQDAPGLAFLPPNGDPAVAKVPLDQADA
Ga0318532_102994362	3300032051	Soil	MTPDQLRRAARNLAYGLGIPFYIRDGRIYQFGPGLVFL
Ga0318570_103690702	3300032054	Soil	MTPDQLRNAARNLAYGLDIPVYIRDGRIYQNGPGLAFLPPNGDPAVPEVP
Ga0318570_105582881	3300032054	Soil	MTPNQLADAARNLAHGLGIPVYIRDGRLYQHGPSLAFLRPSDTHP
Ga0318575_104677522	3300032055	Soil	MTPDQLRGATRNLAYGLGIAVYIRDDRIYQNGPGLAFLPPNGDPAVTEVPLDQEEEAN
Ga0318533_101095033	3300032059	Soil	MLSRGRSAMTPDQLRRAARNLAYGLGIPFYIRDGRIYQFGPGLVFLPPNGDTEVAEIPLDNG
Ga0318533_105020552	3300032059	Soil	MTPEELTSAARNLAHALGIPVYIRDGRIYQHGPGVVVLPPPGAC
Ga0318505_100381944	3300032060	Soil	MTPDQLRGAARNLAYGLGIPVYIRDDRIYQNGPGLAFLPPNGDPPVTEVPF
Ga0318514_106970821	3300032066	Soil	MTPDQLRGAARNLAYGLGIPCYIRDDRIYQNGPGLAFLPPNGGPAVTEVPLDQEEEANTASVS
Ga0318553_102431351	3300032068	Soil	MTPDQLRGAARNLAYGLGIPFYIRDDRIYQNGPGLAFLPPNGGPAVTEVPLDQEEEANTASVSITI
Ga0318553_104040103	3300032068	Soil	MTPDELARAARNLAHSLGIPVYIRNGRIYQHGPGVEFLPPSGVRSTVAG
Ga0306924_104373731	3300032076	Soil	MTPDQLRVAARNLAYGLGIPFYIRDSRIYQDGPGLAFLPPNGDPAEAPFDQKEEVDAANESI
Ga0306924_107860132	3300032076	Soil	MTPDQLRGAARNLAYGLGIPVYIRDGRIYQAGPGLAFLPPNGDPEVPEVLLDQKEAADTA
Ga0318518_105944721	3300032090	Soil	MTPDQLHNAARNLAYGLGIAVYVRDGRIYQNGPGLAFLPPNG
Ga0318577_105096211	3300032091	Soil	MTPDQLRRAARNLAYGLGIPFYIRDGRIYQFGPGLAFLPPNSDTEVAEIPLD
Ga0306920_1021505741	3300032261	Soil	MTPDQLRRAARNLAYGLGIPFYIRDGRIYQFGPGLVFLPPNGD
Ga0306920_1036260471	3300032261	Soil	MTPDQLRSAARNLSFGLGIPVYIRDGRIYQNGPGLAFLPPNGDPAVPEVPFAHEPDSANGSLTIAKAI
Ga0335077_112430941	3300033158	Soil	MTPEQLADNARNLAHALGIAVYIRDGRIYQHGPGIEILPPPGAH
Ga0310914_112701232	3300033289	Soil	MTPDQLRRAARNLAYGLGIPFYIRDGRIYQFGPGLVFLPPNGDTE
Ga0318519_101019871	3300033290	Soil	MTPDQLRNAARNLAYGLDIPVYIRDGRIYQNGPGLAFLPPNGDPAVTEVP
Ga0318519_102851511	3300033290	Soil	MTPDQLRGAARNLAHGLGIPVYIRDGRIYQNGPGLAFLPPNGDPAVPEVTLAHEPDIAN
Ga0318519_104432611	3300033290	Soil	MTPDQLTSAARNLAHGLGIPVYIRDGRIYQDGPGLAFLPPSATRPVVA
Ga0318519_105090572	3300033290	Soil	MTPDQLHNAARNLAYGLGIAVYVRDGRIYQNGPGLAFLPPNGDPAVPEVPHEPDIANGSLTFDKA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080732

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences