Metagenome / Metatranscriptome Family F080876

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080876
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	65 residues
Representative Sequence	MLLNGREAILSRVHLLKAEISDIQRLNEQYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Number of Associated Samples	77
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	54.05 %
% of genes near scaffold ends (potentially truncated)	45.61 %
% of genes from short scaffolds (< 2000 bps)	72.81 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (78.947 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.316 % of family members)
Environment Ontology (ENVO)	Unclassified (25.439 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (74.561 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 87.88% β-sheet: 0.00% Coil/Unstructured: 12.12%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF00171	Aldedh	20.18
PF13632	Glyco_trans_2_3	10.53
PF13641	Glyco_tranf_2_3	7.89
PF02852	Pyr_redox_dim	2.63
PF07992	Pyr_redox_2	1.75
PF00196	GerE	1.75
PF07238	PilZ	1.75
PF03548	LolA	1.75
PF07110	EthD	0.88
PF02403	Seryl_tRNA_N	0.88
PF01715	IPPT	0.88
PF13620	CarboxypepD_reg	0.88
PF01555	N6_N4_Mtase	0.88
PF13231	PMT_2	0.88
PF05164	ZapA	0.88
PF09972	DUF2207	0.88
PF17131	LolA_like	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	20.18
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	20.18
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	20.18
COG2834	Outer membrane lipoprotein-sorting protein	Cell wall/membrane/envelope biogenesis [M]	1.75
COG0172	Seryl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.88
COG0324	tRNA A37 N6-isopentenylltransferase MiaA	Translation, ribosomal structure and biogenesis [J]	0.88
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.88
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.88
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.88
COG3027	Cell division protein ZapA, inhibits GTPase activity of FtsZ	Cell cycle control, cell division, chromosome partitioning [D]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.82 %
Unclassified	root	N/A	20.18 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.82 %
Unclassified	root	N/A	20.18 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.95 %
Unclassified	root	N/A	20.18 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	69.30 %
Unclassified	root	N/A	20.18 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	38.60 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	25.44 %
Unclassified	root	N/A	20.18 %
Candidatus Woesearchaeota	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.60 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	25.44 %
Unclassified	root	N/A	20.18 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.60 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	24.56 %
Unclassified	root	N/A	20.18 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.88 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.60 %
Unclassified	root	N/A	20.18 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	14.04 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.88 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.60 %
Unclassified	root	N/A	20.18 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	11.40 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.88 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10000547	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	28813	Open in IMG/M
3300000567\|JGI12270J11330_10002506	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	13417	Open in IMG/M
3300001356\|JGI12269J14319_10039465	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2983	Open in IMG/M
3300003505\|JGIcombinedJ51221_10004975	All Organisms → cellular organisms → Bacteria → Acidobacteria	3961	Open in IMG/M
3300004080\|Ga0062385_10032102	All Organisms → cellular organisms → Bacteria → Acidobacteria	2113	Open in IMG/M
3300004091\|Ga0062387_100814338	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300004092\|Ga0062389_101748869	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300004092\|Ga0062389_102027783	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	752	Open in IMG/M
3300004152\|Ga0062386_101427453	Not Available	576	Open in IMG/M
3300004631\|Ga0058899_11909026	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300005534\|Ga0070735_10213112	Not Available	1179	Open in IMG/M
3300005534\|Ga0070735_10331585	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	914	Open in IMG/M
3300005534\|Ga0070735_10560514	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300005538\|Ga0070731_10160506	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1492	Open in IMG/M
3300005538\|Ga0070731_10487342	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	821	Open in IMG/M
3300005541\|Ga0070733_10084593	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2010	Open in IMG/M
3300005541\|Ga0070733_10429543	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	880	Open in IMG/M
3300005542\|Ga0070732_10556467	Not Available	696	Open in IMG/M
3300005542\|Ga0070732_10707080	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300005602\|Ga0070762_10000194	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	23267	Open in IMG/M
3300005602\|Ga0070762_10010786	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	4581	Open in IMG/M
3300005602\|Ga0070762_11224784	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300005610\|Ga0070763_10161503	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1176	Open in IMG/M
3300005921\|Ga0070766_10657415	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300006050\|Ga0075028_100168377	Not Available	1167	Open in IMG/M
3300007982\|Ga0102924_1043241	All Organisms → cellular organisms → Bacteria → Acidobacteria	2752	Open in IMG/M
3300007982\|Ga0102924_1386165	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300009519\|Ga0116108_1173231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300009521\|Ga0116222_1141440	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1036	Open in IMG/M
3300009698\|Ga0116216_10804096	Not Available	564	Open in IMG/M
3300009700\|Ga0116217_10354682	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	936	Open in IMG/M
3300010343\|Ga0074044_10174441	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1433	Open in IMG/M
3300010379\|Ga0136449_100018208	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	18190	Open in IMG/M
3300010379\|Ga0136449_103509455	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300010379\|Ga0136449_103513949	Not Available	597	Open in IMG/M
3300011120\|Ga0150983_11324416	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300011120\|Ga0150983_12144982	Not Available	547	Open in IMG/M
3300011120\|Ga0150983_12881837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300011120\|Ga0150983_15241814	Not Available	1117	Open in IMG/M
3300017822\|Ga0187802_10198753	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	771	Open in IMG/M
3300017930\|Ga0187825_10360525	Not Available	552	Open in IMG/M
3300017933\|Ga0187801_10321039	Not Available	633	Open in IMG/M
3300017937\|Ga0187809_10041489	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1478	Open in IMG/M
3300017943\|Ga0187819_10006068	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6693	Open in IMG/M
3300017943\|Ga0187819_10102094	All Organisms → cellular organisms → Bacteria → Acidobacteria	1714	Open in IMG/M
3300017943\|Ga0187819_10519139	Not Available	678	Open in IMG/M
3300017943\|Ga0187819_10684188	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	579	Open in IMG/M
3300017948\|Ga0187847_10565484	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300017955\|Ga0187817_10074880	All Organisms → cellular organisms → Bacteria → Acidobacteria	2110	Open in IMG/M
3300017955\|Ga0187817_10755512	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300018042\|Ga0187871_10006943	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	8099	Open in IMG/M
3300018057\|Ga0187858_10748043	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300020579\|Ga0210407_10002054	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	17754	Open in IMG/M
3300020579\|Ga0210407_10483178	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	968	Open in IMG/M
3300020580\|Ga0210403_10039340	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3781	Open in IMG/M
3300020583\|Ga0210401_10001710	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	25063	Open in IMG/M
3300020583\|Ga0210401_10005149	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	13477	Open in IMG/M
3300020583\|Ga0210401_10215818	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1776	Open in IMG/M
3300020583\|Ga0210401_10395905	Not Available	1243	Open in IMG/M
3300020583\|Ga0210401_10517107	Not Available	1056	Open in IMG/M
3300020583\|Ga0210401_11162202	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300021168\|Ga0210406_10725261	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	763	Open in IMG/M
3300021170\|Ga0210400_10103662	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2256	Open in IMG/M
3300021171\|Ga0210405_10196612	Not Available	1598	Open in IMG/M
3300021178\|Ga0210408_10228640	All Organisms → cellular organisms → Bacteria	1481	Open in IMG/M
3300021180\|Ga0210396_10000177	All Organisms → cellular organisms → Bacteria	108772	Open in IMG/M
3300021180\|Ga0210396_10085149	All Organisms → cellular organisms → Bacteria → Acidobacteria	2867	Open in IMG/M
3300021181\|Ga0210388_10839371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300021402\|Ga0210385_10022136	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4040	Open in IMG/M
3300021403\|Ga0210397_10216550	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1376	Open in IMG/M
3300021403\|Ga0210397_11543152	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300021432\|Ga0210384_10445914	Not Available	1166	Open in IMG/M
3300021432\|Ga0210384_10802152	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300021432\|Ga0210384_11496493	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300021433\|Ga0210391_10271302	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1331	Open in IMG/M
3300021433\|Ga0210391_10400341	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1077	Open in IMG/M
3300021475\|Ga0210392_10460568	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	933	Open in IMG/M
3300021477\|Ga0210398_11175117	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300021478\|Ga0210402_10002507	All Organisms → cellular organisms → Bacteria	17841	Open in IMG/M
3300021478\|Ga0210402_11084564	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300021479\|Ga0210410_10863986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	791	Open in IMG/M
3300022532\|Ga0242655_10219275	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300022730\|Ga0224570_112988	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300022881\|Ga0224545_1016149	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1097	Open in IMG/M
3300025134\|Ga0207416_1177105	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300025320\|Ga0209171_10131961	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1484	Open in IMG/M
3300026557\|Ga0179587_10397357	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	898	Open in IMG/M
3300027172\|Ga0208098_1011586	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	814	Open in IMG/M
3300027565\|Ga0209219_1176260	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300027591\|Ga0209733_1010002	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2486	Open in IMG/M
3300027641\|Ga0208827_1129093	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720	Open in IMG/M
3300027795\|Ga0209139_10251032	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300027842\|Ga0209580_10336124	Not Available	752	Open in IMG/M
3300027867\|Ga0209167_10833127	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300027905\|Ga0209415_10254517	Not Available	1574	Open in IMG/M
3300027986\|Ga0209168_10387318	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300028015\|Ga0265353_1005530	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1062	Open in IMG/M
3300028906\|Ga0308309_11734793	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300030494\|Ga0310037_10145818	Not Available	1076	Open in IMG/M
3300030494\|Ga0310037_10314815	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300031708\|Ga0310686_105979233	All Organisms → cellular organisms → Bacteria	21462	Open in IMG/M
3300031708\|Ga0310686_108329923	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	23690	Open in IMG/M
3300031708\|Ga0310686_119170566	Not Available	506	Open in IMG/M
3300031715\|Ga0307476_10642817	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300031718\|Ga0307474_10051361	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3044	Open in IMG/M
3300031754\|Ga0307475_10202813	Not Available	1586	Open in IMG/M
3300031754\|Ga0307475_11384898	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300031823\|Ga0307478_10201826	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1600	Open in IMG/M
3300031823\|Ga0307478_10241241	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1466	Open in IMG/M
3300032160\|Ga0311301_10012053	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	27067	Open in IMG/M
3300032515\|Ga0348332_10119969	All Organisms → cellular organisms → Bacteria	3239	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.12%
Host-Associated	Host-Associated	0.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.56%
Aquatic	Environmental → Aquatic	24.56%
Plants	Host-Associated → Plants	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.81%
Freshwater	Environmental → Aquatic → Freshwater	20.18%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.51%
Sediment	Environmental → Aquatic → Sediment	0.88%
Peat	Environmental → Terrestrial → Peat	0.88%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.77%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	20.18%
Loam	Environmental → Terrestrial → Soil → Loam	13.16%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.51%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.88%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.58%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.16%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	11.40%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.89%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	3.51%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.88%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.32%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	12.28%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	11.40%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	10.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.89%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.26%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.26%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.26%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	3.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.51%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.63%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.88%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.88%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.88%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.88%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022730	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU2	Host-Associated	Open in IMG/M
3300022881	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24	Environmental	Open in IMG/M
3300025134	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG (SPAdes)	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027172	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF038 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028015	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE6	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_1000054719	3300000567	Peatlands Soil	MLLNGREAILNRVHLLKAEISDIQRLNEQYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ*
JGI12270J11330_100025064	3300000567	Peatlands Soil	MLLNGREAILSRVHLLKAEISDIQRLNEQYTQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ*
JGI12269J14319_100394652	3300001356	Peatlands Soil	MLTNGREAILSRVHLLKAEISDIQRLNEEYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ*
JGIcombinedJ51221_100049751	3300003505	Forest Soil	MLLNGREAILNRVHLLKAEISDIQRLNEQYSQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ*
Ga0062385_100321022	3300004080	Bog Forest Soil	MLLNGREAILNRVHLLKAEISDIQRLNEQYVQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ*
Ga0062387_1008143381	3300004091	Bog Forest Soil	MLLNGREAILNRVQLLKAEISDIQRLNEQYSQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ*
Ga0062389_1017488692	3300004092	Bog Forest Soil	MLLNGREAILSRVHLLKAEISDIQRLNEQYAQQRRTLPAQQNHAQRRGRLEQIVEEL
Ga0062389_1020277831	3300004092	Bog Forest Soil	MLLNGREAILNRVQLLKAEISDIQRLNEQYTQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ*
Ga0062386_1014274532	3300004152	Bog Forest Soil	PELGYSNYMLLNGREAILNRVQLLKAEISDIQRLNEQYSQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ*
Ga0058899_119090261	3300004631	Forest Soil	ASNMLLNGREAILSRVHLLKAEIIDIQRLNEEYAQARRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ*
Ga0070735_102131121	3300005534	Surface Soil	YANDMLLNGREAILSRVHLLKAEISDIQRLNEQYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ*
Ga0070735_103315852	3300005534	Surface Soil	MLLNGREAILSRVHLLKEEISDIQRLNEQYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ*
Ga0070735_105605141	3300005534	Surface Soil	MLLNGREAILSRVHLLKAEISDIQRLNEQYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ*
Ga0070731_101605062	3300005538	Surface Soil	MLLNGREAILNRVQILKTEISDIQRLNDEYAQQRRTLPAQQNHAQRRGRLEQIVEELRALTNRKIQ*
Ga0070731_104873421	3300005538	Surface Soil	MLLNGREAILNRVQLLKAEINDIQRLNEQYSQARRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ*
Ga0070733_100845932	3300005541	Surface Soil	MLLNGREAILNRVQLLKAEISDIQRLNEQYSQARRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ*
Ga0070733_104295431	3300005541	Surface Soil	MLLNGREAILSRVHLLKEEISDIQRLNQQYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ*
Ga0070732_105564672	3300005542	Surface Soil	MLLNGREAILSRVHLLKAEISDIQRLNEEYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ*
Ga0070732_107070802	3300005542	Surface Soil	MLLNGREAILSRVHLLKAEISDIQRLNEQYSQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ*
Ga0070762_1000019412	3300005602	Soil	MLLNGREAILSRVHLLKAEISDIQRLNEQYVQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ*
Ga0070762_100107861	3300005602	Soil	MLLNGREAILSRVHVLKAEISDIQRLNEQYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ*
Ga0070762_112247841	3300005602	Soil	ILSRVHLLKAEISDIQRLNEQYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ*
Ga0070763_101615031	3300005610	Soil	MLLNGREAILNRVHLLKAEISDIQRLNEQYSQQRRTLPAQQNHAQRRGRLEQIVEELKA
Ga0070766_106574152	3300005921	Soil	MLLNGREAILSRVHVLKAEISDIQRLNEQYAQQRRTLPAQQNHAQRRGRLEQIVEELK
Ga0075028_1001683771	3300006050	Watersheds	MNRVQLLKAEISDIQRLNEQYSQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ*
Ga0102924_10432412	3300007982	Iron-Sulfur Acid Spring	MLLNGREAILSRVHLLKEEVSDIQRLNEQYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ*
Ga0102924_13861652	3300007982	Iron-Sulfur Acid Spring	AYASGMLLNGREAILSRVHLLKEEISDIQRLNQQYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ*
Ga0116108_11732311	3300009519	Peatland	MLLNGREAILSRVHLLKAEISDIQRLNEQYAQQRRTLPAQQNHAQRRGRLEQIVEELK
Ga0116222_11414402	3300009521	Peatlands Soil	DMLTNGREAILSRVHLLKAEISDIQRLNEEYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ*
Ga0116216_108040961	3300009698	Peatlands Soil	HLLKAEISDIQRLNEEYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ*
Ga0116217_103546821	3300009700	Peatlands Soil	EAILSRVHLLKAEISDIQRLNEEYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0074044_101744412	3300010343	Bog Forest Soil	MLLNGREAILSRVHLLKAEISDIQRLNEQYTQQRRTLPAQQNHSQRRGRLEQIVEELKALTNRKIQ*
Ga0136449_10001820811	3300010379	Peatlands Soil	MLLNGREAILSRVQVLKAEISDIQRLNEQYSQARRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ*
Ga0136449_1035094551	3300010379	Peatlands Soil	LGYARDMLLNGREAILSRVHLLKAEISDIQRLNEQYTQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ*
Ga0136449_1035139491	3300010379	Peatlands Soil	NGREAILSRVHLLKAEISDIQRLNEEYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ*
Ga0150983_113244161	3300011120	Forest Soil	LNGREAILSRVHLLKAEISDIQRLNEQYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ*
Ga0150983_121449821	3300011120	Forest Soil	AILSRVHLLKAEISDIQRLNEQYSQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ*
Ga0150983_128818372	3300011120	Forest Soil	GREAILSRVHLLKEEISDIQRLNEQYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ*
Ga0150983_152418141	3300011120	Forest Soil	REAILNRVHLLKAEISDIQRLNEQYSQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ*
Ga0187802_101987531	3300017822	Freshwater Sediment	MLTNGREAILSRVHLLKAEISDIQRLNEEYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0187802_103132942	3300017822	Freshwater Sediment	KAEISDIQRLNEEYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0187818_103386921	3300017823	Freshwater Sediment	LLKAEISDIQRLNEEYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0187825_103605252	3300017930	Freshwater Sediment	VHSLKAEISDIQRLNEEYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0187801_103210392	3300017933	Freshwater Sediment	MLLNGREAILNRVQLLKAEISDIQRLNEQYSQARRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0187809_100414893	3300017937	Freshwater Sediment	MLLNGREAILNRVQLLKAEISDIQRLNEQYSQQRRTLPAQQNHAQRRGRLEQIVEELKALANRKIQ
Ga0187819_100060685	3300017943	Freshwater Sediment	MQLNGREAILSRVHSLKAEISDIQRLNEEYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0187819_101020942	3300017943	Freshwater Sediment	MLTNGREAIVSRVHLLKAEISDIQRLNEEYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0187819_105191391	3300017943	Freshwater Sediment	MLLNGREAILNRVHLLKAEISDIQRLNQQYTQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0187819_106841881	3300017943	Freshwater Sediment	SADLPELGYARDMLLNGREAILSRVHLLKAEISDIQRLNEQYTQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0187847_105654842	3300017948	Peatland	MRAHLRELGYASDMLLNGREAILSRVHLLKAEISDIQRLNEQYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0187817_100748801	3300017955	Freshwater Sediment	MLTNGREAILSRVHLLKAEISDIQRLNEEYAQQRRTLPAQQNHAQRRGRLEQI
Ga0187817_107555121	3300017955	Freshwater Sediment	HLLKAEISDIQRLNEEYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0187816_105840311	3300017995	Freshwater Sediment	LKAEISDIQRLNEEYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0187871_100069432	3300018042	Peatland	MLLNGREAILSRVHLLKAEISDIQRLNEQYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0187858_107480432	3300018057	Peatland	MLLNGREAILSRVHLLKAEISDIQRLNEQYAQQRRTLPAQQNHAQRRGRLEQIVEELKAL
Ga0210407_1000205413	3300020579	Soil	MLLNGREAILSRVHLLKAEISDIQRLNEQYSQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0210407_104831781	3300020579	Soil	MLLNGREAILNRVQLLKAEISDIQRLNEQYSQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0210403_100393404	3300020580	Soil	RKLGYARDMLLNGREAILSRVHLLKAEISDIQRLNEQYSQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0210401_1000171017	3300020583	Soil	MLLNGREAILNRVHLLKAEISDIQRLNEQYSQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0210401_100051492	3300020583	Soil	MLLNGREAILSRVHLLKEEISDIQRLNEQYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0210401_102158182	3300020583	Soil	MLLNGREAILNRVQLLKAEINDIQRLNEQYSQARRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0210401_103959052	3300020583	Soil	KYMLLNGREAILNRVQLLKAEISDIQRLNEQYSQARRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0210401_105171072	3300020583	Soil	AILSRVHLLKAEISDIQRLNEQYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0210401_111622022	3300020583	Soil	ELGYARHMLLNGREAILSRVHLLKAEISDIQRLNEQYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0210406_107252612	3300021168	Soil	QLRYAKDMLLNGREAILTRVQLLKAEISDIQRLNEQYAQARRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0210400_101036622	3300021170	Soil	MLLNGREAILSRVHLLKAEISDIQRLNEQYVQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0210405_101966121	3300021171	Soil	SILNRVQLLKAEISDIQRLNEQYSQARRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0210408_102286402	3300021178	Soil	MLLNGREAILSRVQLLKAEISDIQRLNEQYSQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0210396_1000017766	3300021180	Soil	MLLNGREAILNRVQLLKAEINDIQRLNEQYSQARRTLPAQQSHAQRRGRLEQIVEELKALTNRKIQ
Ga0210396_100851491	3300021180	Soil	MLGLAYANDMLLNGREAILSRVHLLKEEISDIQRLNEQYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0210388_108393712	3300021181	Soil	MLLNGREAILNRVQLLKAEVSDIQRLNEQYSQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0210385_100221362	3300021402	Soil	MLLNGREAILSRVHVLKAEISDIQRLNEQYDQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0210397_102165501	3300021403	Soil	MLLNGREAILSRVHLLKAEISDIQRLNEQYSQQRRTLPAQKNHAQRRGRLEQIVEELKALTNRKIQ
Ga0210397_115431521	3300021403	Soil	HLLKAEISDIQRLNEQYSQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0210384_104459142	3300021432	Soil	REAILSRVHLLKAEISDIQRLNEQYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKI
Ga0210384_108021522	3300021432	Soil	MLLNGREAILNRVLLLKAEISDIQRLNEQYSQQRRTLPAQQNHAQRRGRLEQIVEELKALNNRKIQ
Ga0210384_114964932	3300021432	Soil	MLLNGREAILSRVHLLKAEISDIQRLNEQYTQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0210391_102713022	3300021433	Soil	MLLNGREAILSRVHVLKAEISDIQRLNEQYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0210391_104003411	3300021433	Soil	MLLNGREAILNRVHLLKAEISDIQRLNEQYVQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0210392_104605682	3300021475	Soil	MLLNGREAILNRVQILKTEISDIQRLNDEYAQQRRTLPAQQNHAQRRGRLEQIVEELRALTNRKIQ
Ga0210398_111751172	3300021477	Soil	ELGYARDMLLNGREAILSRVHLLKAEISDIQRLNEQYVQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0210402_100025074	3300021478	Soil	MLLNGREAILNRVHLLKAEISDIQRLNEQYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0210402_110845641	3300021478	Soil	ELGYSNYMLLNGREAILNRVQLLKAEISDIQRLNEQYSQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0210410_108639862	3300021479	Soil	LNGREAILNRVQLLKAEISDIQRLNEQYSQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0242655_102192751	3300022532	Soil	AILSRVHLLKAEISDIQRLNEQYSQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0224570_1129882	3300022730	Rhizosphere	ILTRVHLLKAEISDIQRLNEQYTQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0224545_10161492	3300022881	Soil	MLLNGREAILSRVHLLKEEISDIQRLNQQYAKQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0207416_11771051	3300025134	Iron-Sulfur Acid Spring	AYASGMLLNGREAILSRVHLLKEEISDIQRLNQQYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0209171_101319612	3300025320	Iron-Sulfur Acid Spring	MLLNGREAILSRVHLLKEEISDIQRLNQQYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0179587_103973572	3300026557	Vadose Zone Soil	MLLNGREALLSRVHLLKAEISDIQRLNEQYAQQRRTLPAQQNHAQRRGRLEQIVEKLKALTNRKIQ
Ga0208098_10115862	3300027172	Forest Soil	VHLLKAEISDIQRLNEQYSQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0209219_11762601	3300027565	Forest Soil	LLNGREAILSRVHLLKAEISDIQRLNEQYTQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0209733_10100022	3300027591	Forest Soil	MLGLAYAKDMLLNGREAILSRVHLLKEEISDIQRLNEQYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0208827_11290932	3300027641	Peatlands Soil	NRADVHELGYANYMLLNGREAILNRVHLLKAEISDIQRLNEQYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0209139_102510321	3300027795	Bog Forest Soil	MLLNGREAILNRVQLLKAEISDIQRLNEQYTQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0209580_103361242	3300027842	Surface Soil	MLLNGREAILSRVHLLKAEISDIQRLNEEYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0209167_108331272	3300027867	Surface Soil	MLLNGREAILSRVHLLKEEISDIQRLNEQYAQQRRTLPAQQNHAQRRGRLEQIVEEL
Ga0209415_102545171	3300027905	Peatlands Soil	TNRADLRELGYAKDMLTNGREAILSRVHLLKAEISDIQRLNEEYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0209168_103873181	3300027986	Surface Soil	RVHLLKAEISDIQRLNEQYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0265353_10055301	3300028015	Soil	MLLNGREAILNRVQLLKAEISDIQRLNEQYAQARRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0308309_117347931	3300028906	Soil	MLLNGREAILNRVQLLKAEISDIQRLNEQYSQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKI
Ga0310037_101458182	3300030494	Peatlands Soil	LNGREAILNRVHLLKAEISDIQRLNEQYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0310037_103148151	3300030494	Peatlands Soil	ADLRELGYAKDMLTNGREAILSRVHLLKAEISDIQRLNEEYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0310686_10597923320	3300031708	Soil	MLLNGREAILSRVHLLKEEISDIQRLNEQYAQQRRTLPAQKNHAQRRGRLEQIVEELKALTNRKIQ
Ga0310686_1083299237	3300031708	Soil	MLLNGREAILTRVHLLKAEISDIQRLNEQYTQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0310686_1191705661	3300031708	Soil	ADVRELGYARDMLLNGREAILSRVHLLKAEISDIQRLNEQYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0307476_106428172	3300031715	Hardwood Forest Soil	MLLNGREAILTRVHLLKAEISDIQRLNEQYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0307474_100513612	3300031718	Hardwood Forest Soil	MLLNGREAILNRVQLLKAEISDIQRLNEEYAQARRTLPAQQNHAQRRGRLEQIVDELKALTNRKIQ
Ga0307475_102028131	3300031754	Hardwood Forest Soil	MLINGREAILSRVHLLKAEISDIQRLNEQYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0307475_113848982	3300031754	Hardwood Forest Soil	TTSRADLRELGYARNMLLNGREAILTRVHLLKAEISDIQRLNEQYAQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0307478_102018261	3300031823	Hardwood Forest Soil	LNGREAILSRVHLLKAEISDIQRLNEEYAQARRTLPAQQNHAQRRGRLEQIVDELKALTNRKIQ
Ga0307478_102412412	3300031823	Hardwood Forest Soil	VRELGYASDMLLNGREAILSRVHLLKAEISDIQRLNEEYAQARRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0311301_1001205312	3300032160	Peatlands Soil	MLLNGREAILSRVQVLKAEISDIQRLNEQYSQARRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ
Ga0348332_101199691	3300032515	Plant Litter	AILTRVHLLKAEISDIQRLNEQYTQQRRTLPAQQNHAQRRGRLEQIVEELKALTNRKIQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080876

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences