Metagenome / Metatranscriptome Family F081011

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081011
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	89 residues
Representative Sequence	VKRSIPQPLVIVLVVLGFLVATAGGWFLVIGPQRSKAADLDSQIADTHSAIDAAQALTLEAKKGAKIRVADLYRLTKAMPDQVDMAGILL
Number of Associated Samples	101
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.17 %
% of genes near scaffold ends (potentially truncated)	95.61 %
% of genes from short scaffolds (< 2000 bps)	89.47 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.474 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.912 % of family members)
Environment Ontology (ENVO)	Unclassified (30.702 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.491 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 65.25% β-sheet: 0.00% Coil/Unstructured: 34.75%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF05137	PilN	82.46
PF11104	PilM_2	12.28
PF00437	T2SSE	1.75
PF07092	DUF1356	0.88
PF13544	Obsolete Pfam Family	0.88
PF07963	N_methyl	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG3166	Type IV pilus assembly protein PilN	Cell motility [N]	164.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.47 %
Unclassified	root	N/A	10.53 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.47 %
Unclassified	root	N/A	10.53 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.47 %
Unclassified	root	N/A	10.53 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	86.84 %
Unclassified	root	N/A	10.53 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	86.84 %
Unclassified	root	N/A	10.53 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	81.58 %
Unclassified	root	N/A	10.53 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	81.58 %
Unclassified	root	N/A	10.53 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	81.58 %
Unclassified	root	N/A	10.53 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908044\|A5_c1_ConsensusfromContig88223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	767	Open in IMG/M
2124908045\|KansclcFeb2_ConsensusfromContig1018698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300000041\|ARcpr5oldR_c010525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	788	Open in IMG/M
3300000956\|JGI10216J12902_107766423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	939	Open in IMG/M
3300003324\|soilH2_10322118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1087	Open in IMG/M
3300004081\|Ga0063454_101564165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300004463\|Ga0063356_101269581	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300004479\|Ga0062595_100880591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	751	Open in IMG/M
3300004479\|Ga0062595_100881279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	751	Open in IMG/M
3300004479\|Ga0062595_102314887	Not Available	530	Open in IMG/M
3300004643\|Ga0062591_102629928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300005093\|Ga0062594_100379315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1129	Open in IMG/M
3300005093\|Ga0062594_100436128	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300005334\|Ga0068869_101535693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	592	Open in IMG/M
3300005336\|Ga0070680_100473613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1070	Open in IMG/M
3300005338\|Ga0068868_101331238	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300005345\|Ga0070692_10985163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300005347\|Ga0070668_100034406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3860	Open in IMG/M
3300005434\|Ga0070709_10513269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	912	Open in IMG/M
3300005437\|Ga0070710_10961130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	620	Open in IMG/M
3300005451\|Ga0066681_10802431	Not Available	568	Open in IMG/M
3300005459\|Ga0068867_100672289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	911	Open in IMG/M
3300005535\|Ga0070684_100505450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1119	Open in IMG/M
3300005535\|Ga0070684_102132803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529	Open in IMG/M
3300005543\|Ga0070672_100754750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	854	Open in IMG/M
3300005563\|Ga0068855_100338114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1661	Open in IMG/M
3300005563\|Ga0068855_100978965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	890	Open in IMG/M
3300005615\|Ga0070702_100143489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1524	Open in IMG/M
3300005841\|Ga0068863_100679787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1022	Open in IMG/M
3300005843\|Ga0068860_101131527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	803	Open in IMG/M
3300006031\|Ga0066651_10021059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2811	Open in IMG/M
3300006844\|Ga0075428_101565804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	689	Open in IMG/M
3300006844\|Ga0075428_102752681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300006847\|Ga0075431_100577384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1110	Open in IMG/M
3300006852\|Ga0075433_10231611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1640	Open in IMG/M
3300006881\|Ga0068865_100741318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	843	Open in IMG/M
3300009012\|Ga0066710_102006173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	858	Open in IMG/M
3300009093\|Ga0105240_12256955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	564	Open in IMG/M
3300009094\|Ga0111539_10528002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1375	Open in IMG/M
3300009094\|Ga0111539_10660667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1217	Open in IMG/M
3300009100\|Ga0075418_10471399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1346	Open in IMG/M
3300009137\|Ga0066709_100735528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1423	Open in IMG/M
3300009148\|Ga0105243_10216158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1691	Open in IMG/M
3300009156\|Ga0111538_14007246	Not Available	509	Open in IMG/M
3300009162\|Ga0075423_12663625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300010039\|Ga0126309_10387542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	833	Open in IMG/M
3300010373\|Ga0134128_10998415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	925	Open in IMG/M
3300010399\|Ga0134127_10995025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	898	Open in IMG/M
3300010403\|Ga0134123_10614637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1047	Open in IMG/M
3300012200\|Ga0137382_10818777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	670	Open in IMG/M
3300012200\|Ga0137382_11059947	Not Available	580	Open in IMG/M
3300012208\|Ga0137376_10292770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1413	Open in IMG/M
3300012490\|Ga0157322_1002960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1004	Open in IMG/M
3300012496\|Ga0157353_1051083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300012505\|Ga0157339_1037365	Not Available	595	Open in IMG/M
3300012514\|Ga0157330_1075680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300012957\|Ga0164303_10350951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	891	Open in IMG/M
3300012958\|Ga0164299_11061323	Not Available	602	Open in IMG/M
3300012977\|Ga0134087_10284136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	770	Open in IMG/M
3300012985\|Ga0164308_10249902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1382	Open in IMG/M
3300013296\|Ga0157374_11393815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	724	Open in IMG/M
3300013296\|Ga0157374_11859149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300013306\|Ga0163162_10334501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1647	Open in IMG/M
3300015200\|Ga0173480_10034065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2205	Open in IMG/M
3300015371\|Ga0132258_12710833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1236	Open in IMG/M
3300015372\|Ga0132256_100532871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1286	Open in IMG/M
3300015372\|Ga0132256_103809928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300015373\|Ga0132257_100864212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1132	Open in IMG/M
3300017654\|Ga0134069_1344141	Not Available	535	Open in IMG/M
3300018027\|Ga0184605_10457750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300018028\|Ga0184608_10383279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	613	Open in IMG/M
3300018082\|Ga0184639_10388645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	722	Open in IMG/M
3300018482\|Ga0066669_10327431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1259	Open in IMG/M
3300019255\|Ga0184643_1386076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	632	Open in IMG/M
3300019362\|Ga0173479_10020976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1861	Open in IMG/M
3300019869\|Ga0193705_1069384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	699	Open in IMG/M
3300021445\|Ga0182009_10654779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	566	Open in IMG/M
3300022534\|Ga0224452_1045654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1294	Open in IMG/M
3300022756\|Ga0222622_11047498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300022883\|Ga0247786_1124650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568	Open in IMG/M
3300022901\|Ga0247788_1002647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2792	Open in IMG/M
3300022915\|Ga0247790_10001569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4284	Open in IMG/M
3300023067\|Ga0247743_1012992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1032	Open in IMG/M
3300023263\|Ga0247800_1069687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	672	Open in IMG/M
3300024055\|Ga0247794_10305303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300024224\|Ga0247673_1002184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2306	Open in IMG/M
3300024251\|Ga0247679_1067281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300024287\|Ga0247690_1019794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	763	Open in IMG/M
3300025898\|Ga0207692_10932541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	572	Open in IMG/M
3300025899\|Ga0207642_10629187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	670	Open in IMG/M
3300025903\|Ga0207680_10708884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	721	Open in IMG/M
3300025916\|Ga0207663_10825368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	739	Open in IMG/M
3300025921\|Ga0207652_11005006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	733	Open in IMG/M
3300025934\|Ga0207686_11249311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	609	Open in IMG/M
3300025938\|Ga0207704_10815981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	780	Open in IMG/M
3300026295\|Ga0209234_1292830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300026331\|Ga0209267_1160141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	918	Open in IMG/M
3300027821\|Ga0209811_10164396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	828	Open in IMG/M
3300028072\|Ga0247675_1028321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	814	Open in IMG/M
3300028707\|Ga0307291_1126707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	644	Open in IMG/M
3300028744\|Ga0307318_10105850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	953	Open in IMG/M
3300028754\|Ga0307297_10098753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	957	Open in IMG/M
3300028754\|Ga0307297_10207526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	686	Open in IMG/M
3300028784\|Ga0307282_10449896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	625	Open in IMG/M
3300028824\|Ga0307310_10003331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6114	Open in IMG/M
3300028824\|Ga0307310_10195753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	952	Open in IMG/M
3300028828\|Ga0307312_10184221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1337	Open in IMG/M
3300028881\|Ga0307277_10106206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1194	Open in IMG/M
3300032174\|Ga0307470_10098377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1668	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.42%
Host-Associated	Host-Associated	31.58%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.16%
Plants	Host-Associated → Plants	31.58%
Aquatic	Environmental → Aquatic	5.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.91%
Sediment	Environmental → Aquatic → Sediment	4.39%
Freshwater	Environmental → Aquatic → Freshwater	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.63%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.28%
Loam	Environmental → Terrestrial → Soil → Loam	10.53%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.39%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.63%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.28%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	11.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.63%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.88%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.88%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.91%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.26%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.39%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.51%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.51%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.63%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.63%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.63%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.75%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.75%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.88%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.88%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.88%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.88%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.88%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908044	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Active Layer A5	Environmental	Open in IMG/M
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000041	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere	Host-Associated	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012490	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.4.old.040610	Host-Associated	Open in IMG/M
3300012496	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.090610	Environmental	Open in IMG/M
3300012505	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.yng.090610	Host-Associated	Open in IMG/M
3300012514	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300022901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300023067	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S221-509R-5	Environmental	Open in IMG/M
3300023263	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300024224	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK14	Environmental	Open in IMG/M
3300024251	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK20	Environmental	Open in IMG/M
3300024279	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33	Environmental	Open in IMG/M
3300024287	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK31	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028072	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK16	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A5_c1_00264020	2124908044	Soil	VKRRIPQPLVIGLIVLGFAIVGLGGWFMLIGPQRSRAAALDTQIADTNDAISAARALTLDAKKGAEIRVADLFRLTKAMPDQTDMPGILLELNQVAQDSGITFE
KansclcFeb2_10945760	2124908045	Soil	VKRTLPMPAVIALMVVGFLVAAGGGYFVLIRPQHAKASSVQKQITDTQEAIDSARALTLQAKKAAQIRVADLFRLTKAMPDQTDMAGIVLELNKVAEDSG
ARcpr5oldR_0105252	3300000041	Arabidopsis Rhizosphere	VKRSIPQPLVIVLIVFGFVLAAAGGWFMIIGPQRSHAADLDKQLADTNDAIAAARALTLEAKKGAKI
JGI10216J12902_1039944113	3300000956	Soil	VKRRFPQPLLIVLIVLGFLLAALGGWFLLVSPQRSKAAELDHQIADTNNAITAARALTLQAKKGAQIRVA
JGI10216J12902_1077664231	3300000956	Soil	VKRRVPQPLLIALIALGFVLAGLGGWFLLIGPQRSKATDLDHQIADTNSAITAARALTLQAKKGAQIRVADLYRLTKAMPDQVDMAGIILEL
soilH2_103221183	3300003324	Sugarcane Root And Bulk Soil	VKRRMPQPLVIALIALGLLVAGLGGWFLVIQPQHSKASSLDKQIADTNDAIASARALTLQAKKGAEIRVADLYRLTKAM
Ga0063454_1015641652	3300004081	Soil	VKSRFPQPVVIALIVVGFLVVGAGGWFTLIRPQQAKASDLDHQIADTNSAIEAARALTLEAKKGAQIRVADLYRLTKAMPDQVDMAGILLEL
Ga0063356_1012695811	3300004463	Arabidopsis Thaliana Rhizosphere	VKRSIPQPLVIVLVVLGFLVATAGGWFLVIGPQRSKAADLDSQIADTHSAIDAAQALTLEAKKGA
Ga0062595_1008805912	3300004479	Soil	VKRRISQPLLIALIALGFVLVGLGGWFLVIGPQRAHAGDLDKQIADTNDAIAAARALTLEAKKGARIRVADLYRLTKAMPDQVDMPGIVLELNQVAEDSGITFEQI
Ga0062595_1008812792	3300004479	Soil	VKSRFPQPVVIALIVVGFLLAGVGGYFTLIRPQHAKASDLDRQIADTNSAIDAARALTLEAKKGAQIRVADLYR
Ga0062595_1023148871	3300004479	Soil	VKRSIPQPLVIVLIVVGFVLAAAGGWFMIIAPQRSHAADLDKQIADTNDAITAARALTLEAKKGAKIRVADLYRLTKAMPDQVDMPGIILELNQVA
Ga0062591_1026299281	3300004643	Soil	VKTRLSQPVLIALIAVGFLVLGAGGWFTLIRPQHAEASDLDHQIADTNSAIDAARALTLEAKKGAQIRVADLYRLTKAMPDQVDMAGILLELNQ
Ga0062594_1003793153	3300005093	Soil	VKRGLSQPVQIALAVVGVLVFALGGYFMLIRPQHAKAKAVDVQIASTNEAIDSARALTLQAKKAAQIRVADVFRLTKAMPDQAEMPDI
Ga0062594_1004361281	3300005093	Soil	VKRSIPQPLVIVLVVLGFLVATAGGWFLVIGPQRSKAADLDSQIADTHSAIDAAQALTLEAKKGAKIRVADLYRLTKAMPDQVDM
Ga0068869_1015356931	3300005334	Miscanthus Rhizosphere	VKSRGLPQPVLIAVIVFGFLLAGVGGYMMLIRPQHAKAADLDTQIADTNSAIDAARALTLEAKKGAQIRVADLYRLTKAMPDQVDMAGILLE
Ga0070680_1004736131	3300005336	Corn Rhizosphere	VKRGLSQPVQIALAVVGVLVFALGGYFMLIRPQHAKAKAVDVQIASTNEAIDSARALTLQAKKAAQIRVADVFRLTKAMPDQA
Ga0068868_1013312382	3300005338	Miscanthus Rhizosphere	VKTKLSQPVVIALIVVGFIIFAGGGYFTLIRPQHAKASELDQQIADTNSAIDAARALTLEAKKGAQIRVADLYRLTKAMPDQVDMAGILLELNQVAEDSG
Ga0070692_109851631	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	VKRRIPQPLLIALIALGFVLVGLGGWFLVIGPQRAHAGDLDKQIADTNDAIAAARALTLEAKKGARIRVADLYRLT
Ga0070668_1000344061	3300005347	Switchgrass Rhizosphere	VKRRIPQPLLIALIALGFVLVGLGGWFLVIGPQRAHAGDLDKQIADTNDAIAAARALTLEAKKGARIRVADLYRLTKAMPDQVDMPGIVLELNQVAEDSGITFEQI
Ga0070688_1014345582	3300005365	Switchgrass Rhizosphere	VKTKLSQPVVIALIVVGFIIFAGGGYFTLIRPQHAKASELDQEIADTNSAIDAARALTLEAKKGAQIRVADLYRLTKA
Ga0070709_105132692	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VKTRAIPQPVVIALIAAGFLLAAFGGYFVLIQPQHSKAGDLDRQISDTNSAIDAARALTLEAKKGAQIRVADLYRLTKAMPDQVDMAGILLELNQV
Ga0070710_109611301	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VKSRGLSQPALIALIVGGLLLAGIGGYFMLVRPQHAKAADLDRQISDTNSAIDAARALTLEAKKGAQIRVADLYRLTKAMPDQADMAGILLQLNQVAEDSGITFEQIT
Ga0066681_108024311	3300005451	Soil	VKRGLPQPALIGLIVLGFVLAGVGGYFMLIGPQKSKAASLDKQIADTNQAIDSARALTLQAKTDAKIRVADLFRLTKAMP
Ga0068867_1006722892	3300005459	Miscanthus Rhizosphere	VKRRIPQPLLIALIALGFVLVGLGGWFLVIGPQRAHAGDLDKQIADTNDAIAAARALTLEAKKGARIRVADLY
Ga0073909_100256033	3300005526	Surface Soil	VKRSGLPQPALIALIVIGFLLAGVGGYMMLIRPQHAKAADLDTQIADTNSAIDAARSLTLEAKKGAQIRVADLYRL
Ga0070684_1005054503	3300005535	Corn Rhizosphere	VKTRLSQPVVIALIVFGFIVFAGGGYFTLIRPQHAKASDLDQQIADTNSAIDAARALTLEAKKGAQIRVADLYRLTK
Ga0070684_1021328032	3300005535	Corn Rhizosphere	VKRRFPQSAVIALIAFGFLLAAAGGYFLVLGPQRSKAADLNKQIVDTNSAIDAARALTLEAKKGAQIRVADLYRLTKAMPDQTDMAGIILELNQV
Ga0070672_1007547501	3300005543	Miscanthus Rhizosphere	VKTKLSQPVVIALIVVGFIIFAGGGYFTLIRPQHAKASELDQQIADTNSAIDAARALTLEAKKGAQIRVADLYRLTKAMPDQADMAGILLQLNQVAEDSGI
Ga0068855_1003381141	3300005563	Corn Rhizosphere	VKSRGLPQPVLIAVIVFGFLLAGVGGYMMLIRPQHAKAADLDTQIADTNSAIDAARALTLEAKKGAQIRVADLYRLTKAMPDQVDMA
Ga0068855_1009789652	3300005563	Corn Rhizosphere	VKRRIPQPLLIALIALGFVLVGLGGWFLVIGPQRAHAGDLDKQIADTNDAIAAARALTLEAKKGARIRVADLYRLTKAMPD
Ga0070702_1001434893	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VKRRIPQPLLIALIALGFVLVGLGGWFLVIGPQRAHAGDLDKQIADTNDAIAAARALTLEAKKGARIRVADLYRLTKAMPDQVDMPGIVLELNQVAEDSGI
Ga0068863_1006797873	3300005841	Switchgrass Rhizosphere	VKTKLSQPVVIALIVVGFIIFAGGGYFTLIRPQHAKASELDQQIADTNSAIDAARALTLEAKKGAQIRVADLYRLTKAMPDQVDMAGILLQLNQV
Ga0068860_1011315272	3300005843	Switchgrass Rhizosphere	VKSRGLPQPVLIAVIVFGFLLAGVGGYMMLIRPQHAKAADLDTQIADTNSAIDAARALTLEAKKGAQIRVADLYRLTKAMPDQVDMAGILLELNQVAEDSGITFEQI
Ga0066651_100210591	3300006031	Soil	VKRTLPMPAVIALMVVGFLVAAAGGYFVLIRPQHSKASSLQKQIADTQEAIDSARALTLQAKKAAQIRVADLFRLTKAMPDQTDM
Ga0075428_1015658041	3300006844	Populus Rhizosphere	VKRSIPQPLVIVLVALGFLVATAGGWFLVIGPQRSKAADLDSQIADTHSAIDAAQALTLEAKKGAKIRVADLYRLTKAMPDQVDMAG
Ga0075428_1027526811	3300006844	Populus Rhizosphere	VKRSIPQPLVIVLVVLGFLVATAGGWFLVIGPQRSKAADLDSQIADTHSAIDAAQALTLEAKKGAKIRVADLYRLTKAMPDQVDMAGILL
Ga0075431_1005773841	3300006847	Populus Rhizosphere	VKTRGLSQPVVIVLIVVGFLLVAAGGWFTLIRPQHAKASDLDTQIADTNSAIEAARALTLEAKKGAQIRVADLYRL
Ga0075433_102316113	3300006852	Populus Rhizosphere	VKRSIPQPLVIVLIVFGFVLVAAGGWFMIIGPQRSHASDLDKQIADSNDAITAARALTLEAKKGAKIRVADLYR
Ga0068865_1007413181	3300006881	Miscanthus Rhizosphere	VKTKLSQPVVIALIVVGFIIFAGGGYFTLIRPQHAKASELDQQIADTNSAIDAARALTLEAKKGAQIRVADLYRLTKAMPDQVDMAGIL
Ga0066710_1020061732	3300009012	Grasslands Soil	VKRGMPQPLLIGLIVLGFVLAGVGGYFILIAPQHSKAASLDKQIADTSDAIDSARALTLQAKAGAKIRVADLFRLTKAMPDQTDMAGIVLELNGIAEDSGITFEQITPATTAVALSGYEA
Ga0105240_122569552	3300009093	Corn Rhizosphere	VKSRGLPQPVLIAVIVFGFLLAGVGGYMMLIRPQHAKAADLDTQIADTNSAIDAARALTLEAKKGAQIRVADLYRLTKAMPDQVDMAGILLELNQVAEE
Ga0111539_105280023	3300009094	Populus Rhizosphere	VKRSIPQPLVIVLVALGFLVATAGGWFLVIGPQRSKAADLDSQIADTHSAIDAAQALTLEAKKGAKIRVADLYRLTKAMPDQVDMAGILLELNQVAA
Ga0111539_106606671	3300009094	Populus Rhizosphere	VKRSIPQPLVIVLVVLGFLVATAGGWFLVIGPQRSKAADLDSQIADTHSAIDAAQALTLEAKKGAKIRVADLYRLTKAMPDQVDMPGILLE
Ga0075418_104713993	3300009100	Populus Rhizosphere	VKRSIPQPLVIVLVALGFLVATAGGWFLVIGPQRSKAADLDSQIADTHSAIDAAQALTLEAKKGAKIRVADLYRLTKAMPDQVDMAGI
Ga0066709_1007355281	3300009137	Grasslands Soil	VKRTLPMPAVIALMVVGFLVAAAGGYFVLISPQHSKASSLQKQITDTQDAIDSARALTLQAKEAAQIRVADLFRLTKAMPDQTDMPDIVLELNKI
Ga0105243_102161583	3300009148	Miscanthus Rhizosphere	VKSRFPQPVVIALIVVGFLLAGVGGYFTLIRPQHAKASDLDRQIADTNSAIDAARALTLEAKKGAQIRVADLYRLTKAMPDQVDMAGILLELNQVAEDSGITFEQI
Ga0111538_140072461	3300009156	Populus Rhizosphere	VKRSIPQPLVIVLVALGFLVATAGGWFLVIGPQRSKAADLDSQIADTHSAIDAAQALTLEAKKGAKIRVADLYRLTKAMPDQVDMAGILLE
Ga0075423_126636251	3300009162	Populus Rhizosphere	VKRSIPQPLVIALIVFGFVLVAAGGWFMIIGPQRSHASDLDKQIADTNDAITAARALTLEAKKGAKI
Ga0126309_103875421	3300010039	Serpentine Soil	VKRRVPQPLVIVLIALGFVLAGLGGWFLLIGPQRSKASELETQIADTNEAIAAARALTLEAKKGAKIRVADLYRLTKAMPDQVDM
Ga0134128_109984152	3300010373	Terrestrial Soil	MKRGLSQPVQIALAVVGVLVFALGGYFMLIRPQHAKAKAVDTEIASTNSAIDSARALTLQAKKAAQIRVADMFRLTKAMPDQAAMPDILLELNHVAEASGITF
Ga0134127_109950252	3300010399	Terrestrial Soil	VKRRIPQPLLIALIALGFVLVGLGGWFLVIGPQRAHAGDLDKQIADTNDAIAAARALTLEAKKGARIRVADLYRLTKAMPDQVD
Ga0134123_106146371	3300010403	Terrestrial Soil	VKRRFPQSAVIALIAFGFLLAAAGGYFLVLGPQRSKAADLNKQIVDTNSAIDAARALTLEAKKGAQIRVADLYRLTKAMPDQTDMAGIILELNQ
Ga0137382_108187772	3300012200	Vadose Zone Soil	VKRGLPQPALIALIVLGFVIAGIGGYFLLIGPQKSKAAALNKQIADTNQAIDSARALTLQAKTDAKIRVADVFRLTKAMPDQTDMSDILL
Ga0137382_110599472	3300012200	Vadose Zone Soil	VIALIVVGFLLVGAGGWFTLIRPQHTKASDLDTQIADTNSAIDAARAITLEAKKGAQIRVADLYRLTKAMPDQVDMAGILLELN
Ga0137376_102927701	3300012208	Vadose Zone Soil	VKRRVPQPLVIGLIVLGLAVAGLGGWFMLISPQRSKATELDTQIADTNNAISAARALTLEAKKGAQIRV
Ga0157322_10029601	3300012490	Arabidopsis Rhizosphere	VKRSIPQPLVIVLIVFGFVLAAAGGWFMIIGPQRSHAADLDKQLADTNDAIAAARALTLEAKKGAKIRVADLYRLTK
Ga0157353_10510832	3300012496	Unplanted Soil	VKRAIPQPLVIVLIVVGFLVVAAGGWFLLIGPQRSKATDLDHQIADTQSAIGAAQALTLEAKKGAKIRVADLYRLTKAMPDQVDMPGILLELNQV
Ga0157339_10373651	3300012505	Arabidopsis Rhizosphere	VKRSIPQPLVIVLIVFGFVLAAAGGWFMIIGPQRSHAADLDKQLADTNDAIAAARALTLEAKKGAKIRVADLYKLTKAMPDQVDMPGIILELNQ
Ga0157330_10756801	3300012514	Soil	VKRAIPQPLVIVLIVVGFLVVAAGGWFLLIGPQRSKATDLDHQIADTQSAIGAAQALTLEAKKGAKIRVADLYRLTKAMPDQVDMPGILLELNQVASDS
Ga0164303_103509512	3300012957	Soil	VIALIVVGFLLAGVGGYMMLIRPQHAKAADLDRQIADTNSAIDAARALTLEAKKGAQIRVADLYRLTKAMPHQVDMAGILLELNQVAQDSGITFEQIT
Ga0164299_110613231	3300012958	Soil	VKSRGLSQPVVIALIVVGFLLAGVGGYMMLIRPQHAKAADLDRQIADTNSAIDAARALTLEAKKGAQIRVADLYRLTKAMPDQVDMAGILLELNQVAQD
Ga0134087_102841361	3300012977	Grasslands Soil	VKSSVPQPVVIILIVIGFLIAALGGYFLLLGPQRSKAASLDRQIVDTQSSVDSARALTLQAKQGAKIRVTDIFRLTKAMPDQTDMAGI
Ga0164308_102499023	3300012985	Soil	VKRSGLPQPALIALIVVGFLLAGMGGYFMLIRPQHAKAADLDRQIADTNSAIDAARALTLEAKKGAQIRVADLYRLTKAMPDQVDMAGILLELNQVAQDSGITFEQI
Ga0157374_113938152	3300013296	Miscanthus Rhizosphere	VKTKLSQPVVIALIVVGFIIFAGGGYFTLIRPQHAKASELDQEIADTNSAIDAARALTLEAKKGAQIRVADLYRLTKAMPDQVDMAGILLQLNQVA
Ga0157374_118591492	3300013296	Miscanthus Rhizosphere	VKRSIPQPLVIVLVVLGFLVATAGGWFLVIGPQRSKAADLDSQIADTHSAIDAAQALTLEAKKGAKIRVADLY
Ga0163162_103345011	3300013306	Switchgrass Rhizosphere	VKRSIPQPLVIVLVVLGFLVATAGGWFLVIGPQRSKAADLDSQIADTHSAIDAAQALTLEAKKGAKIRVADLYRLTK
Ga0173480_100340653	3300015200	Soil	VKRSIPQPLVIVLVVLGFLVATAGGWFLVIGPQRSKAADLDSQIADTHSAIDAAQALTLEAKKGAK
Ga0132258_127108331	3300015371	Arabidopsis Rhizosphere	VKRSIPQPLVIFLVVLGFLVATAGGWFLVIGPQRSKAADLDSQIADTHSAIDAAQALTLQAKKGAKIRVADLYRLTKAMPDQVDMAGILLELNQVAADSGIPFEQSAHSTTATPV
Ga0132256_1005328711	3300015372	Arabidopsis Rhizosphere	MKRAIPQPLVIVLIIVGFLVVAAAGWFLLIGPQRSKSTDLEHQIADTQSAIDAAQALTVEAKKGAKIRVADLYRLTKAMPDQVDMPGILLELNQVASDSGIT
Ga0132256_1038099281	3300015372	Arabidopsis Rhizosphere	VKTKLSQPVVIALIVVGFIIFAGGGYFTLIRPQHAKASELDQQIADTNSAIDAARALTLEAKKGAQIRVADLYRLTKAMPDQVDM
Ga0132257_1008642121	3300015373	Arabidopsis Rhizosphere	VKHSIPQPLVIVLIVLGFLVATAGGWFLVIGPQRSKAADLDSQIADTHSAIDAAQALTLQAKKGAKIRVADLYRLTKAM
Ga0134069_13441412	3300017654	Grasslands Soil	VKRGLPQPALIGLIVLGFVIAGIGGYFLLIGPQKSKAAALNKQIADTNQAIDSARALTLQAKTDAKIRVADVFRLTKAMPDQTDM
Ga0184605_104577501	3300018027	Groundwater Sediment	VKRRMPQPVLIALIVLGFVVAGLGGWFMLIGPQRSKATELDTQIADTNNAISAARALTLEAKKGALIRVADLFRLTKAMPDQTDMPGILLQLNQVA
Ga0184608_103832791	3300018028	Groundwater Sediment	VKRRFPQPLLIALIALGLLLAGLGGWFLLIGPQRSKAGDLDHQIADTNDAITSARALTLQAKKGAQIRVADLYCLTKAMPDQVDMAGIILELNQV
Ga0184639_103886452	3300018082	Groundwater Sediment	VKRRISQPLLIALIALGFVLVGLGGWFLVIGPQRAHAGDLDKQIADTNDAIAAARALTLEAKKGARIRVADLYRLTKAMPDQVDM
Ga0066669_103274311	3300018482	Grasslands Soil	VKRGLPQPALIGLIVLGFVLAGVGGYFMLIGPQKSKAASLDKQIADTNQAIDSARALTLQAKTDAKIRVADLFRLTKAMPDQT
Ga0184643_13860762	3300019255	Groundwater Sediment	VKRRMPQPVLIALIVLGFVVAGLGGWFMLIGPQRSQAKELDTQIADTNNAISAARALTLEAKKGAQIRVADLFRLTKAMPDQTDMP
Ga0173479_100209763	3300019362	Soil	VKRSIPQPLVIVLVVLGFLVATAGGWFLVIGPQRSKAADLDSQIADTHSAIDAAQALTLEAKKGAKIRVADLYRLTKAMPDQVDMAGILLELNQVAAD
Ga0193705_10693841	3300019869	Soil	VKRRISQPLLIALIALGFVLVGLGGWFLVIGPQRAHAGDLDKQIADTNDAIAAARALTLEAKKGARIRVADL
Ga0182009_106547791	3300021445	Soil	VKRGLSQPVQIALAVVGVLVFALGGYFMLIRPQHAKAKAVDTDIASTNEAIDSARALTLQAKKDAQIRVADMFRLTKAMPDQAEMPD
Ga0224452_10456543	3300022534	Groundwater Sediment	VKPRFPQPALIALIAVGFVLAALGGWFLLINPQRSHASDIETQIADTNDAIAAARALTLEAKKGAKIRVADLYRLTKAMPDQVDMPGIVLELNQVAEDSGITFEQITP
Ga0222622_110474981	3300022756	Groundwater Sediment	VKRRISQPLLIALIALGFVLVGLGGWFLVIGPQRAHAGDLDKQIADTNDAIAAARALTLEAKKGARIRVADLYRLTKAMPD
Ga0247786_11246501	3300022883	Soil	VKRSIPQPLVIVLVVLGFLVATAGGWFLVIGPQRSKAADLDSQIADTHSAIDAAQALTLEAKKGAKIRVADLYRLT
Ga0247788_10026474	3300022901	Soil	VKRSIPQPLVIVLVVLGFLVATAGGWFLVIGPQRSKAADLDSQIADTHSAIDAAQALTLEAKKGAKIRVADLYRLTKAMPDQV
Ga0247790_100015696	3300022915	Soil	VKRSIPQPLVIVLVVLGFLVATAGGWFLVIGPQRSKAADLDSQIADTHSAIDAAQALTLEAKKGAKIRVADLYRLTKAMPDQVDMAGILLE
Ga0247743_10129921	3300023067	Soil	VKRSIPQPLVIVLVVLGFLVATAGGWFLVIGPQRSKAADLDSQIADTHSAIDAAQALTLEAKKGAKIRVADLYRLTKAMPDQ
Ga0247800_10696871	3300023263	Soil	VKRSIPQPLVIVLVVLGFLVATAGGWFLVIGPQRSKAADLDSQIADTHSAIDAAQALTLEAKKGAKIRVADLYRLTKAMPDQVDMAGILLELNQV
Ga0247794_103053032	3300024055	Soil	VKRSIPQPLVIVLVVLGFLVATAGGWFLVIGPQRSKAADLDSQIADTHSAIDAAQALTLEAKKGAKIRVADLYRLTKAMPDQVDMAGILLELNRVAADS
Ga0247673_10021841	3300024224	Soil	VKRRFPQSAVIALIAFGFLLAAAGGYFLVLGPQRSKASDLNKQIVDTNSAIDAARALTLEAKKGAQIRVADLYRLT
Ga0247679_10672812	3300024251	Soil	VKRRFPQSAVIALIAFGFLLAAAGGYFLVLGPQRSKASDLNKQIVDTNSAIDAARALTLEAKKGAQIRVADLYRLTKAMPDQTDMAGIILELNQ
Ga0247692_10070631	3300024279	Soil	VKRRFPQSAVIALIAFGFLLAAAGGYFLVLGPQRSKASDLNKQIVDTNSAIDAARALTLEAKKGAQIRVADLY
Ga0247690_10197942	3300024287	Soil	VKRRFPQSAVIALIAFGFLLAAAGGYFLVLGPQRSKASDLNKQIVDTNSAIDAARALTLEAKKGAQIRVADLYRL
Ga0207692_109325412	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VKSRGLSQPALIALIVGGLLLAGIGGYFMLVRPQHAKAADLDRQISDTNSAIDAARALTLEAKKGAQIRVADLYRLTKAMPDQVDMAGILLELNQ
Ga0207642_106291871	3300025899	Miscanthus Rhizosphere	VKRRIPQPLLIALIALGFVLVGLGGWFLVIGPQRAHAGDLDKQIADTNDAIAAARALTLEAKKGARIRVADLYRLTKAMPDQVDMPGIVL
Ga0207680_107088842	3300025903	Switchgrass Rhizosphere	VKRRFPQSAVIALIAFGFLLAAAGGYFLVLGPQRSKASDLNKQIVDTNSAIDAARALTLEAKKGAQIRVADLYRLTKAMPDQVDMAGILLQLNQVAE
Ga0207663_108253682	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VKRRFPQSAVIALIAFGFLLAAAGGYFLVLGPQRSKASDLNQQIADTNSAIDAARALTLEAKKGAQIRVADLYRLTKAMPDQTDMAGIILELNQVAQES
Ga0207652_110050061	3300025921	Corn Rhizosphere	VKRRFPQSAVIALIAFGFLLAAAGGYFLVLGPQRSKASDLNKQIVDTNSAIDAARALTLEAKKGAQIRVADLYRLTKA
Ga0207686_112493112	3300025934	Miscanthus Rhizosphere	VKRRIPQPLLIALIALGFVLVGLGGWFLVIGPQRAHAGDLDKQIADTNDAIAAARALTLEAKKGARIRVADLYRLTKAMPDQVDMPGIVLELNQVAE
Ga0207704_108159811	3300025938	Miscanthus Rhizosphere	VKTKLSQPVVIALIVVGFIIFAGGGYFTLIRPQHAKASELDQQIADTNSAIDAARALTLEAKKGAQIRVADLYRLTKAMP
Ga0209234_12928302	3300026295	Grasslands Soil	VKRGLPQPALIGLIVLGFVLAGVGGYFMLIGPQKSKAASLDKQIADTNQAIDSARALTLQAKTDAKIRVADLFRLTKAMPDNPDEAGVLLD
Ga0209267_11601411	3300026331	Soil	VKSSVPQPVVIILIVIGFLIAALGGYFLLLGPQRSKAASLDRQIVDTQSSVDSARALTLQAKQGAKIRVTDIFRLTKAMPDQTDMAGILLELNQVA
Ga0209811_101643961	3300027821	Surface Soil	VKKGLSQPVLIALIVAGFLVLAGGGWFTLIRPQHAKAADIDHQIADTNSAIDAARALTLEAKKGAQIRVADLYRLTKAMPDQVDMAGILLELNQVAEDSGITFD
Ga0247675_10283212	3300028072	Soil	VKRRFPQSAVIALIAFGFLLAAAGGYFLVLGPQRSKASDLNKQIVDTNSAIDAARALTLEAKKGAQIRVADLYRLTKAM
Ga0307291_11267072	3300028707	Soil	VKKGLSQPVLIALIVAGFLVLGGGGWFTLIRPQHAKAADFDQQIADTNSAIDAARALTLEAKKGAQIRVADLYRLTKAMPDQVDMPG
Ga0307318_101058502	3300028744	Soil	VKRRISQPLLIALIALGFVLVGLGGWFLVIGPQRAHAGDLDKQIADTNDAIAAARALTLEAKKGARIRVADLYRLTKAMPDQVDMPGIVLELNQVAEDSGITFEQIT
Ga0307297_100987531	3300028754	Soil	VKPRFPQPALIALIAVGFVLAALGGWFLLINPQRSHASDIETQIADTNDAIAAARALTLEAKKGAKIRVADLYRLTKAMPDQVDM
Ga0307297_102075261	3300028754	Soil	VKRGLSQPVQIALAVVGVLVFALGGYFMLIRPQHAKAKAVDVQIASTNEAIDSARALTLQAKQAAQIRVADVFRLTKAMPDQA
Ga0307288_103534872	3300028778	Soil	MKRRIPQPLVIGLIVLGFTVAGLGGWFMLIGPQRSKATELDTQIADTNNAISAARALTLEAKKGAQIR
Ga0307282_104498961	3300028784	Soil	VKRRIPQPLVIGLIVLGFVVAGVGGWLTLIGPQHSKAKELDTQIADTHPAISAARALTLEAKKGAQIRVADLFRLTKAMPDQTDMPGILL
Ga0307310_100033311	3300028824	Soil	VKPRFPQPALIALIAVGFVLAALGGWFLLINPQRSHASDIETQIADTNDAIAAARALTLEAKKGAKIRVADLYRLTKAMPDQVDMAGIVLELNQVAEDSGI
Ga0307310_101957532	3300028824	Soil	VKRRISQPLLIALIALGFVLVGLGGWFLVIGPQRAHAGDLDKQIADTNDAIAAARALTLEAKKGARIRVADLYRLTKAMPDQVDMPGIVLEL
Ga0307312_101842213	3300028828	Soil	VKRRISQPLLIALIALGFVLVGLGGWFLVIGPQRAHAGDLDKQIADTNDAIAAARALTLEAKKGARIRVADLYRLTKA
Ga0307277_101062061	3300028881	Soil	VKRRFPQPLLIALIALGLLLAGLGGWFLLIGPQRSKAGDLDHQIADTNDAITAARALTLQAKKGAQIRVADLYRLTKAMPDQVDMAGIILELNQVADDSG
Ga0307470_100983773	3300032174	Hardwood Forest Soil	VKRSIPQPLVIVLVVLGFLVATAGGWFLVIGPQRSKAADLDSQIADTHSAIDAAQALTLEAKKGAKIRVADLYRLTKAMPDQVDMAGILLELNQVAADSGITFEQI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081011

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences