NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F081052

Metagenome / Metatranscriptome Family F081052

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F081052
Family Type Metagenome / Metatranscriptome
Number of Sequences 114
Average Sequence Length 108 residues
Representative Sequence DERGIQFVEAGFYRDSGSHTAKIAGLGYQYKLGKRWRLGGALLGVQSETYNDGNFLLAPIPILTYDLGAVKLNAIYVPRYGEYNEFAVFGFYFSLPLGK
Number of Associated Samples 85
Number of Associated Scaffolds 114

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 32.46 %
% of genes near scaffold ends (potentially truncated) 37.72 %
% of genes from short scaffolds (< 2000 bps) 82.46 %
Associated GOLD sequencing projects 81
AlphaFold2 3D model prediction Yes
3D model pTM-score0.79

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (71.930 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil
(36.842 % of family members)
Environment Ontology (ENVO) Unclassified
(53.509 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Subsurface (non-saline)
(50.877 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 5.51%    β-sheet: 48.03%    Coil/Unstructured: 46.46%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.79
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
f.4.1.2: OMPA-liked3gp6a13gp60.69
f.4.1.1: OMPA-liked1p4ta_1p4t0.63
b.61.6.0: YceI-liked5ixga_5ixg0.63
f.4.1.1: OMPA-liked1qjpa_1qjp0.61
b.159.2.1: SO1590-liked2q03a12q030.61

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 114 Family Scaffolds
PF05532CsbD 16.67
PF00482T2SSF 9.65
PF06745ATPase 5.26
PF13545HTH_Crp_2 3.51
PF08238Sel1 1.75
PF00072Response_reg 1.75
PF07689KaiB 1.75
PF02518HATPase_c 1.75
PF13529Peptidase_C39_2 0.88
PF13185GAF_2 0.88
PF01435Peptidase_M48 0.88
PF04612T2SSM 0.88
PF00437T2SSE 0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 114 Family Scaffolds
COG3237Uncharacterized conserved protein YjbJ, UPF0337 familyFunction unknown [S] 16.67
COG3149Type II secretory pathway, component PulMIntracellular trafficking, secretion, and vesicular transport [U] 0.88

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms71.93 %
UnclassifiedrootN/A28.07 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001686|C688J18823_10280517All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1099Open in IMG/M
3300004081|Ga0063454_100677934All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria771Open in IMG/M
3300004153|Ga0063455_101033043All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria599Open in IMG/M
3300005440|Ga0070705_101624537All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Thiobacillaceae → Thiobacillus → Thiobacillus denitrificans544Open in IMG/M
3300005441|Ga0070700_101034334All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → unclassified Gallionellaceae → Gallionellaceae bacterium677Open in IMG/M
3300005471|Ga0070698_101181680Not Available714Open in IMG/M
3300005518|Ga0070699_101985625Not Available532Open in IMG/M
3300005533|Ga0070734_10211268All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1117Open in IMG/M
3300005547|Ga0070693_100530854Not Available839Open in IMG/M
3300005549|Ga0070704_100282791All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → unclassified Gallionellaceae → Gallionellaceae bacterium1375Open in IMG/M
3300005569|Ga0066705_10098366All Organisms → cellular organisms → Bacteria → Proteobacteria1736Open in IMG/M
3300006032|Ga0066696_10322168All Organisms → cellular organisms → Bacteria1006Open in IMG/M
3300006804|Ga0079221_11100188All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → unclassified Gallionellaceae → Gallionellaceae bacterium608Open in IMG/M
3300006852|Ga0075433_11702386All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → unclassified Gallionellaceae → Gallionellaceae bacterium543Open in IMG/M
3300006903|Ga0075426_10021411All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria4623Open in IMG/M
3300006903|Ga0075426_10075510All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → unclassified Gallionellaceae → Gallionellaceae bacterium2407Open in IMG/M
3300006903|Ga0075426_10489452All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria913Open in IMG/M
3300006904|Ga0075424_101786622All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria650Open in IMG/M
3300006914|Ga0075436_100840519Not Available685Open in IMG/M
3300009147|Ga0114129_10852049All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1158Open in IMG/M
3300009162|Ga0075423_10202064All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2084Open in IMG/M
3300009597|Ga0105259_1138472Not Available589Open in IMG/M
3300009609|Ga0105347_1005880All Organisms → cellular organisms → Bacteria → Proteobacteria4410Open in IMG/M
3300009609|Ga0105347_1231152Not Available754Open in IMG/M
3300009609|Ga0105347_1295274Not Available678Open in IMG/M
3300009610|Ga0105340_1000045All Organisms → cellular organisms → Bacteria → Proteobacteria54223Open in IMG/M
3300011399|Ga0137466_1060095Not Available598Open in IMG/M
3300011405|Ga0137340_1075745All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria653Open in IMG/M
3300011409|Ga0137323_1129777Not Available549Open in IMG/M
3300011414|Ga0137442_1020654All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1147Open in IMG/M
3300011415|Ga0137325_1009719All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1886Open in IMG/M
3300011416|Ga0137422_1016409All Organisms → cellular organisms → Bacteria1727Open in IMG/M
3300011420|Ga0137314_1049604Not Available1016Open in IMG/M
3300011428|Ga0137456_1009642All Organisms → cellular organisms → Bacteria → Proteobacteria1847Open in IMG/M
3300011433|Ga0137443_1008772All Organisms → cellular organisms → Bacteria → Proteobacteria2380Open in IMG/M
3300011436|Ga0137458_1006976All Organisms → cellular organisms → Bacteria → Proteobacteria2435Open in IMG/M
3300011437|Ga0137429_1276977Not Available518Open in IMG/M
3300011438|Ga0137451_1080912Not Available976Open in IMG/M
3300011438|Ga0137451_1088846All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → unclassified Gallionellaceae → Gallionellaceae bacterium934Open in IMG/M
3300011439|Ga0137432_1265989Not Available550Open in IMG/M
3300011443|Ga0137457_1013457All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → Ferriphaselus → Ferriphaselus amnicola2028Open in IMG/M
3300011443|Ga0137457_1265773Not Available587Open in IMG/M
3300012039|Ga0137421_1026182All Organisms → cellular organisms → Bacteria1472Open in IMG/M
3300012133|Ga0137329_1016893All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria839Open in IMG/M
3300012161|Ga0137336_1049799Not Available767Open in IMG/M
3300012167|Ga0137319_1003687All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria3459Open in IMG/M
3300012172|Ga0137320_1021436All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_131284Open in IMG/M
3300012173|Ga0137327_1115684Not Available594Open in IMG/M
3300012175|Ga0137321_1097721Not Available661Open in IMG/M
3300012179|Ga0137334_1050121Not Available887Open in IMG/M
3300012212|Ga0150985_108074725Not Available634Open in IMG/M
3300014326|Ga0157380_11594036Not Available708Open in IMG/M
3300014866|Ga0180090_1005485All Organisms → cellular organisms → Bacteria → Proteobacteria1818Open in IMG/M
3300014872|Ga0180087_1007781All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1804Open in IMG/M
3300014876|Ga0180064_1022495All Organisms → cellular organisms → Bacteria → Proteobacteria1215Open in IMG/M
3300014877|Ga0180074_1014402All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1484Open in IMG/M
3300014882|Ga0180069_1013959All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1649Open in IMG/M
3300015252|Ga0180075_1086206All Organisms → cellular organisms → Bacteria → Proteobacteria554Open in IMG/M
3300015256|Ga0180073_1136027All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria530Open in IMG/M
3300015257|Ga0180067_1060949All Organisms → cellular organisms → Bacteria → Proteobacteria812Open in IMG/M
3300015257|Ga0180067_1131428Not Available571Open in IMG/M
3300015259|Ga0180085_1127819Not Available757Open in IMG/M
3300015371|Ga0132258_10287090All Organisms → cellular organisms → Bacteria → Proteobacteria4041Open in IMG/M
3300015371|Ga0132258_12599435All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1265Open in IMG/M
3300015374|Ga0132255_103976313All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria627Open in IMG/M
3300018466|Ga0190268_12257376All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → unclassified Gallionellaceae → Gallionellaceae bacterium511Open in IMG/M
3300019208|Ga0180110_1119150All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales711Open in IMG/M
3300019228|Ga0180119_1113819All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria656Open in IMG/M
3300019228|Ga0180119_1272108All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales854Open in IMG/M
3300019228|Ga0180119_1286495All Organisms → cellular organisms → Bacteria → Proteobacteria3972Open in IMG/M
3300019232|Ga0180114_1365935All Organisms → cellular organisms → Bacteria → Proteobacteria1237Open in IMG/M
3300019257|Ga0180115_1184141All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → unclassified Gallionellaceae → Gallionellaceae bacterium1210Open in IMG/M
3300019257|Ga0180115_1295385All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria622Open in IMG/M
3300020064|Ga0180107_1181095All Organisms → cellular organisms → Bacteria → Proteobacteria943Open in IMG/M
3300021063|Ga0206227_1044869All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales797Open in IMG/M
3300025160|Ga0209109_10000861All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales16700Open in IMG/M
3300025160|Ga0209109_10120485All Organisms → cellular organisms → Bacteria1340Open in IMG/M
3300025160|Ga0209109_10311735Not Available749Open in IMG/M
3300025165|Ga0209108_10009691All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria5451Open in IMG/M
3300025165|Ga0209108_10536031Not Available556Open in IMG/M
3300025289|Ga0209002_10418135All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → unclassified Gallionellaceae → Gallionellaceae bacterium758Open in IMG/M
3300025324|Ga0209640_10314550Not Available1306Open in IMG/M
3300026550|Ga0209474_10242503All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1117Open in IMG/M
3300026550|Ga0209474_10560951All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → unclassified Gallionellaceae → Gallionellaceae bacterium581Open in IMG/M
3300027533|Ga0208185_1000033All Organisms → cellular organisms → Bacteria → Proteobacteria82437Open in IMG/M
3300027573|Ga0208454_1003991All Organisms → cellular organisms → Bacteria → Proteobacteria4430Open in IMG/M
3300027573|Ga0208454_1104455Not Available662Open in IMG/M
3300028802|Ga0307503_10071049All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → unclassified Gallionellaceae → Gallionellaceae bacterium1400Open in IMG/M
3300030620|Ga0302046_10363661All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales1189Open in IMG/M
3300030620|Ga0302046_11143933All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300030620|Ga0302046_11387652Not Available546Open in IMG/M
3300031170|Ga0307498_10075929All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales980Open in IMG/M
3300031226|Ga0307497_10091931All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → unclassified Gallionellaceae → Gallionellaceae bacterium1164Open in IMG/M
3300031720|Ga0307469_10216261All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → unclassified Gallionellaceae → Gallionellaceae bacterium1511Open in IMG/M
3300031720|Ga0307469_11009979Not Available777Open in IMG/M
3300031740|Ga0307468_100024303All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2754Open in IMG/M
3300031820|Ga0307473_10463761All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → unclassified Gallionellaceae → Gallionellaceae bacterium847Open in IMG/M
3300031820|Ga0307473_11514469Not Available509Open in IMG/M
3300031965|Ga0326597_10011896All Organisms → cellular organisms → Bacteria → Proteobacteria11499Open in IMG/M
3300031965|Ga0326597_10140006All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → unclassified Gallionellaceae → Gallionellaceae bacterium2899Open in IMG/M
3300031965|Ga0326597_11187938All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → unclassified Gallionellaceae → Gallionellaceae bacterium754Open in IMG/M
3300031965|Ga0326597_11415990All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → unclassified Gallionellaceae → Gallionellaceae bacterium672Open in IMG/M
3300031965|Ga0326597_11494012All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales649Open in IMG/M
3300032144|Ga0315910_11555132All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales516Open in IMG/M
3300032180|Ga0307471_100182952All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2070Open in IMG/M
3300032180|Ga0307471_100313363All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → unclassified Gallionellaceae → Gallionellaceae bacterium1662Open in IMG/M
3300032180|Ga0307471_101918850All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria741Open in IMG/M
3300032180|Ga0307471_102569713All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → unclassified Gallionellaceae → Gallionellaceae bacterium645Open in IMG/M
3300032205|Ga0307472_101129140All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → unclassified Gallionellaceae → Gallionellaceae bacterium744Open in IMG/M
3300032205|Ga0307472_102478217All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → unclassified Gallionellaceae → Gallionellaceae bacterium527Open in IMG/M
3300033407|Ga0214472_10638825Not Available974Open in IMG/M
3300033407|Ga0214472_11564901Not Available562Open in IMG/M
3300033417|Ga0214471_10068809All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae2899Open in IMG/M
3300034178|Ga0364934_0330306Not Available578Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil36.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil11.40%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil9.65%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment7.02%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere7.02%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.26%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.26%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.51%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil2.63%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.63%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.63%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.88%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.88%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.88%
Deep Subsurface SedimentEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment0.88%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.88%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.88%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.88%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005533Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1EnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009597Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT299EnvironmentalOpen in IMG/M
3300009609Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890EnvironmentalOpen in IMG/M
3300009610Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700EnvironmentalOpen in IMG/M
3300011399Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT842_2EnvironmentalOpen in IMG/M
3300011405Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT400_2EnvironmentalOpen in IMG/M
3300011409Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT423_2EnvironmentalOpen in IMG/M
3300011414Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT266_2EnvironmentalOpen in IMG/M
3300011415Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT469_2EnvironmentalOpen in IMG/M
3300011416Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT551_2EnvironmentalOpen in IMG/M
3300011420Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT199_2EnvironmentalOpen in IMG/M
3300011428Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT615_2EnvironmentalOpen in IMG/M
3300011433Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT300_2EnvironmentalOpen in IMG/M
3300011436Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2EnvironmentalOpen in IMG/M
3300011437Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2EnvironmentalOpen in IMG/M
3300011438Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2EnvironmentalOpen in IMG/M
3300011439Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2EnvironmentalOpen in IMG/M
3300011443Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2EnvironmentalOpen in IMG/M
3300012039Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT534_2EnvironmentalOpen in IMG/M
3300012133Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT121_2EnvironmentalOpen in IMG/M
3300012161Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT300_2EnvironmentalOpen in IMG/M
3300012167Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT333_2EnvironmentalOpen in IMG/M
3300012172Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT366_2EnvironmentalOpen in IMG/M
3300012173Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT517_2EnvironmentalOpen in IMG/M
3300012175Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT399_2EnvironmentalOpen in IMG/M
3300012179Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT262_2EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014866Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT890_16_10DEnvironmentalOpen in IMG/M
3300014872Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT790_16_10DEnvironmentalOpen in IMG/M
3300014876Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200_16_10DEnvironmentalOpen in IMG/M
3300014877Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT366_16_10DEnvironmentalOpen in IMG/M
3300014882Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231B'_16_10DEnvironmentalOpen in IMG/M
3300015252Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT399_16_10DEnvironmentalOpen in IMG/M
3300015256Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT333_16_10DEnvironmentalOpen in IMG/M
3300015257Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231_16_10DEnvironmentalOpen in IMG/M
3300015259Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10DEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300019208Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT231_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019228Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT790_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019232Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT530_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019257Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020064Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT27_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021063Subsurface sediment microbial communities from Mancos shale, Colorado, United States - Mancos D4EnvironmentalOpen in IMG/M
3300025160Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2EnvironmentalOpen in IMG/M
3300025165Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1EnvironmentalOpen in IMG/M
3300025289Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 2EnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300027533Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)EnvironmentalOpen in IMG/M
3300027573Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100 (SPAdes)EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300030620Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111EnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031965Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185EnvironmentalOpen in IMG/M
3300032144Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soilEnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033407Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175EnvironmentalOpen in IMG/M
3300033417Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155EnvironmentalOpen in IMG/M
3300034178Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C688J18823_1028051723300001686SoilVQFVEAGVYRDSGSRLAKIAGMGYQYKVGTRWRLGGALLGVQSDTYNGGAPFIAPLPIATYDLGRVKLNAIYAPHYGTYNPFSAFGFYLSVPLAR*
Ga0063454_10067793413300004081SoilVGLNYTVSESERGIQFVEAGLYRDSGSRLAKIAGVGYQYKLGKRWRLGGALLGIQSQTYNGGSPFIAPLPIVTYDLGRMKLNAVFAPHYGSYNPFATFGFYFSAPLAR*
Ga0063455_10103304323300004153SoilRHGSREGGFDNQLNLGAGLNYTVSENERGIQFVEAGLYRDSGSRLAKIAGMGYQYKLGKRWRLGGALLGIQSQTYNGGTPFIAPLPIATYDLGRVKLNAVFAPHYGSYNPFATFGFYFSVPLAR*
Ga0070705_10162453713300005440Corn, Switchgrass And Miscanthus RhizosphereSLNEVNIGLGLGYTFHEDERGAGFVEAGLYQDSGSHWAKLAGVGYQFKLGERWRLGGVLAGLDSPTYNHGRFFVAPLPMVTYDLGAVKLNAIFVPRYQENRFAVFGLYFSIPLSPNVLP*
Ga0070700_10103433423300005441Corn, Switchgrass And Miscanthus RhizosphereVEAGFYRDSGSRLAKIAGVGYQFKLGERWRLGGALLGVQSATYNHGGAFIAPVPILTYDFGAVKLNAIYVPRYGQYNQFAVFGLYFSLPLAR*
Ga0070698_10118168013300005471Corn, Switchgrass And Miscanthus RhizosphereVSDSERGVHFVEAGLYRDSGSRLAKIAGMGYQYKVGKRWRLGGALLGVQSETYNGGSPFIAPLPIATYDLGRVKLNAMFAPHYGAYNPFATFGFYFSVPLTR*
Ga0070699_10198562513300005518Corn, Switchgrass And Miscanthus RhizosphereVSDSERGVHFVEAGLYRDSGSRLAKIAGMGYQYKVGKRWRLGGALLGVQSETYNGGSPFLAPLPIATYDLGKVKLNAIFAPHYGTYNPFAAFGFYLSLPLAR*
Ga0070734_1021126823300005533Surface SoilVRRNGLDNELNLGLGLNYQFHEDARGVAFAEAGFYRDSGSNLAKIAGVGYQFKLGERWRLGGALVGVHSPTYNRGRSFIAPLPIVTYDLGPVQLNAIYVPRYGDYNRFAVFGFYFSVPFGK*
Ga0070693_10053085423300005547Corn, Switchgrass And Miscanthus RhizosphereVDNELNLGFGLNYVFQQDARGLAFVEAGFYRDSGSNLAKLAGIGYQYKLGERWRLGGALVGVDSPTYNRGRFFVAPLPVATYDFGPVKLNAIYVPRYGVYNRFAVFGFYFGIPIGR*
Ga0070704_10028279123300005549Corn, Switchgrass And Miscanthus RhizosphereLGYTFHEDERGAGFVEAGLYQDSGSHWAKLAGAGYQFKLGERWRLGGVLAGLDSPTYNHGRFFVAPLPMVTYDLGAVKLNAIFVPRYQENRFAVFGLYFSIPLSPNVLP*
Ga0066705_1009836633300005569SoilVKEGERTIQFVEAGLYRDSGSRLAKVAGMGYQYKFGKRWRLGGALLGVQSQTYNGGTPFLAPLPIATYDLGKVKLNAVFAPHYGAYNPFATFGFYFSMPLAR*
Ga0066696_1032216833300006032SoilGAREGGFDNQLNLGVGLNYTVSESERAIQFVEAGLYRDSGSRLAKIAGMGYQYKVGKRWRLGGALLGIQSQTYNGGSPFIAPLPIVTYDLGKVKLNAVFAPHYGSYNPFATFGFYFSAPLAR*
Ga0079221_1110018823300006804Agricultural SoilVHEDERGIQFVEAGFYRDSGSRVAKIAGMGYQYKLGSRWRLGGALLGVQSQTYNHGSAFIAPLPILTYDLGRVKLNAIYVPRYGEYNQFAVFGFYFSVPLAH*
Ga0075433_1170238623300006852Populus RhizosphereVQFAEAGFYKDSGSRLAKLAGLGYQFKLGQRWRLGGALSAIQSETYNNGNLFVAPIPILTYDFGALKLNAIYVPRYDDYNKFAVFGFYFSVPLRSVFGR*
Ga0075426_1002141113300006903Populus RhizosphereGFYRDSGSRLAKIAGMGYQYKLDSRWRFGGALIGVQSQTYNHGNAFIAPLPILTYDLGRVQLNAIYVPRYGDYNQFAVFGFYFSMPLAR*
Ga0075426_1007551043300006903Populus RhizosphereLDNELNLGLGLNYTVHEDERGIQFVEAGFYRDSGSRLAKIAGMGYQYKLDRWRLGGALIGVQSQTYNHGSAFIAPLPILTYDLGRVQLNAIYVPRYGDYNQF
Ga0075426_1048945213300006903Populus RhizosphereVGENERSIQFVEAGLYRDSGSRLAKIAGIGYQYKLGKRWRLGGALLGVQSQTYNGGTPFIAPLPIATYDLGRVKLNAVFAPHYGAYNPFATFGFYFSVP
Ga0075424_10178662223300006904Populus RhizosphereEAGFYRDSGSHLAKLAGMGYQYKLARRWRLGGALVGLHSQTYNHGRAFIAPVPIATYDLGRVKLNAIYLPRYGDYNQFAVFGFYLSVPLSR*
Ga0075436_10084051913300006914Populus RhizosphereFVEAGFYQDSGSRLAKIAGVGYQYKLGKRWRLGGALLGVQSETYNGGSPFIAPLPIATYDLGPVKVNAVFIPHYGEYNPFATLGFYFSLPLKR*
Ga0114129_1085204913300009147Populus RhizosphereNQLNLGVGLNYTVKENERAIQFVEAGLYRDSGSRLAKVAGMGYQYKLGKHWRLGGALLGVQSQTYNDGTPFIAPLPIVTYDLGRVKLNAVFAPHYGSYNPFATFGFYFSLPLAR*
Ga0075423_1020206413300009162Populus RhizosphereFYKDSGSRLAKVAGMGYQYKLGKRWRLGGALFGIQSETYNGGSPFIAPLPIATYDLGRVKLNAVFAPHYGSYNPFATFGFYFSVPLKR*
Ga0105259_113847213300009597SoilVEAGFYQDSGSRTAKIAGLGYQYKLGRRWRLGGALLGVQSETYNNGRFFVAPIPILTYDLGPVKLNAIYVPAYGDYNE
Ga0105347_100588083300009609SoilVEAGFYQDSGSRTAKIAGLGYQYKLGRRWRLGGALLGVQSETYNDGRFFVAPIPILTYDLGPVKLNAIYVPAYGEYNEFAVFGFYFSMPLGR*
Ga0105347_123115213300009609SoilTDQQGVRSNGLDNEVNTGVGLNYAFHDDARGVGFVETGFYRDSGDKVATLGGIGYQYKLGKYWRIGGALVGIQSETYNHGRFFIAPLPILTFDLGNMKLNTLYVPSYGEYNKYAVYGFYFSLPLAR*
Ga0105347_129527423300009609SoilVEAGFYRDSGSHTAKLAGLGYQYKLGKRWRLGGAVLAIQSETYNDGDPFLAPIPILTYDLGPVKLNAIYVPRYGDYNAFAVFGFYFSMPLGR*
Ga0105340_1000045523300009610SoilVEAGFYRDSGSHTAKIAGLGYQYKLAKRWRLGGALLAVQSGTYNHGRLFVAPIPILTYDLGAVKLNAIYVPSYGEYNEFAVLGFYFSLPLGR*
Ga0137466_106009513300011399SoilLDNEVNSGVGLNYAFHTDSRGVGFVEAGFYRDSGDKVATLGGIGYQYKLGKYWRLGGALVGIQSETYNHGRFFVAPLPILTFDFGYLKLNTMYVPAYGDYNKYAVYGFYFSLPLVQ*
Ga0137340_107574513300011405SoilLNYTLHEDERGIQFVEAGFYRDSGSHTAKIAGLGYQYKLAKRWRLGGVLLAVQSETYNHGRLFVAPIPILTYDLGAVKLNAIYVPSYGEYNEFAVLGFYFSLPLGR*
Ga0137323_112977713300011409SoilVRLPEAGFYQDSGSRTAKIAGLGYQYKLGRRWRLGGALLGVQSETYNDGNFLLAPIPILTYDLGAVKLNAIYVPRYGEYNEFAVFGFYFSLPLGK*
Ga0137442_102065423300011414SoilLDNEINLGLGLNYTVQEDERGVAFVEAGFYRDSGSNLAKLAGMGYQYKLGKRWRLGGALVASQSQTYNRGNAFIAPLPILTYDLGAVTLNAIFVPSYGEYNRFAVFGFYFSLPLAK*
Ga0137325_100971963300011415SoilYGFSHHTDRDGVESKGLDNELNTGLGLNYTLHEDERGIQFVEAGFYQDSGSRTAKIAGLGYQYKLGRRWRLGGALLGVQSETYNDGRFFVAPIPILTYDLGPVKLNAIYVPAYGEYNEFAVFGFYFSMPLGR*
Ga0137422_101640913300011416SoilLDNELNTGLGLNYTLHEDERGIQFVEAGFYQDSGSRTAKIAGLGYQYKLGRRWRLGGALLGVQSETYNNGRFFVAPIPILTYDLGPVKLNAIYVPAYGEYNEFAVFGFYFSMPLGR*
Ga0137314_104960423300011420SoilMDNAFNTGLGLNYTLHENERGIQFVEAGFYQDSGSHTAKIAGLGYQYKLGKRWRLGGALLGVQSETYNDGNFLLAPIPILTYDLGAVKLNAIYVPRYGEYNEFAVFGFYFSLPLGK*
Ga0137456_100964243300011428SoilLDNEINLGLGLNYTVQEDERGVAFVEAGFYRDSGSNLAKLAGMGYQYKLGKRWRLGGALVALQSQTYNRGNAFIAPLPILTYDLGAVTLNAIFVPSYGEYNRFAVFGFYFSLPLAK*
Ga0137443_100877223300011433SoilLDNEINLGLGLNYTVQEDERGVAFAEAGFYRDSGSHLAKLAGMGYQYKLGKRWRLGGALVALQSQTYNRGNAFIAPLPILTYDFGAVTLNAIFVPSYGEYNRFAVFGFYFSLPLAK*
Ga0137458_100697643300011436SoilLDNELNLGLGLNYTVHEDERGVGFAEAGFYRDSGSNLAKLAGMGYQYKLGKRWRLGGALVALQSQTYNRGNAFIAPLPILTYDFGAVTLNAIFVPSYGEYNRFAVFGFYFSLPLAK*
Ga0137429_127697723300011437SoilVEAGFYRDSGSRTAKIAGLGYQYKLGRRWRLGGALLGVQSETYNDGRFFVAPIPILTYDLGPVKLNAIYVPRYGDYNAFAVFGFYFSMPLGR*
Ga0137451_108091213300011438SoilDQQGVKQNGLDNQLNLGLGLNYEFHNDERGVGFVEAGFYQDSGSNTAKLAGVGYQYKLGKNWRLGGALVGLKSPTYNHGSFFIAPLPILTYDFGPVQLNAIYVPPYGDYNEFAVFGFYFNVPLGKNGSTH*
Ga0137451_108884623300011438SoilVEAGFYQDSGSHTAKIAGLGYQYKLGKRWRLGGAVLGVQSETYNDGRFFLAPIPILTYDLGPVKLNAIYVPRYGEYNEFAVFGFYFSMPLGR*
Ga0137432_126598923300011439SoilVEAGFYQDSGSRTAKIAGLGYQYKLGRRWRLGGALLGVQSETYNDGRFFVAPIPILTYDLGPVKLNAIYVPAYGEYNEFAVFGFYF
Ga0137457_101345713300011443SoilHNDERGVGFVEAGFYQDSGSNTAKLAGVGYQYKLGKNWRLGGALVGLKSPTYNHGSFFIAPLPILTYDFGPVQLNAIYVPPYGDYNEFAVFGFYFSVPLGKNGSTH*
Ga0137457_126577313300011443SoilNALNVGLGLNYTLHEDERGIRFVEAGFYQDSGSRTAKIAGLGYQYKLGRRWRLGGALLGVQSETYNDGRFFVAPIPILTYDLGPVKLNAIYVPAYGDYNEFAVFGFYFSMPLGR*
Ga0137421_102618243300012039SoilVEAGFYRDSGSHTAKLAGLGYQYKLGRRWRLGGALLGVQSETYNDGRFFVAPIPILTYDLGPVKLNAIYVPAYGDYNEFAVFGFYFSMPLGR*
Ga0137329_101689313300012133SoilHTDRDGVESKGLDNELNTGLGLNYTLHEDERGIQFVEAGFYQDSGSRTAKIAGLGYQYKLGRRWRLGGALLGVQSETYNDGRFFVAPIPILTYDLGPVKLNAIYVPAYGDYNEFAVFGFYFSMPLGR*
Ga0137336_104979923300012161SoilVEAGFYRDSGSHTAKIAGLGYQYKLGKRWRLGGALLGVQSETYNHGRFFVAPIPILTYDLGAVKLNAIFVPSYGEYNEFAVLGFYFSLPLGK*
Ga0137319_100368753300012167SoilVEAGFYQDSGSRTAKIAGLGYQYKLGRRWRLGGALLGVQSETYNDGRFFVAPIPILTYDLGPVKLNAIYVPAYGEYNEFAVFGIYFSMPLGR*
Ga0137320_102143623300012172SoilYHTDQQGVKQNGLDNQLNLGLGLNYEFHNDERGVGFVEAGFYQDSGSNTAKLAGVGYQYKLGKNWRLGGALVGLKSPTYNQGSFFIAPLPILTYDFGPVQLNAIYVPPYGDYNEFAVFGFYFSVPLGKNGSTH*
Ga0137327_111568423300012173SoilVEAGFYRDSGSHLAKIAGLGYQYKLGKRWRLGGALVALQSQTYNRGNAFIAPLPILTYDFGAVTLNAIFVPSYGEYNRFAVFGFYFSLPLAK*
Ga0137321_109772123300012175SoilVEAGFYQDSGSRTAKIAGLGYQYKVGKRWRLGGAVLGVQSQTYNDGRFFVAPIPILTYDLGAVKLNAIYVPRYGEYNEFAVFGFYFSMPLGR*
Ga0137334_105012113300012179SoilVEAGFYQDSGSRTAKIAGLGYQYKLGRRWRLGGALLGVQSETYNDGRFFVAPIPILTYDLGPVKLNAIYVPAYGDYNEFAVFGFYFSMPLGR*
Ga0150985_10807472513300012212Avena Fatua RhizosphereVNDSERGVQFVEAGVYRDSGSRLAKIAGMGYQYKVGTRWRLGGALLGVQSDTYNGGAPFIAPLPIATYDLGRVKLNAIYAPHYGTYNPFSAFGFYLSVPLAR*
Ga0157380_1159403623300014326Switchgrass RhizosphereVDNELNVGLGLNYTVHEDERGIGFVEAGLYGDSGRNLAKVAGIGYQYKLGKRWRLGGSLMAIQSETYNQGSAFIAPLPLLTYDFGPVKVNATYVPKFGEYNQFAVFAVYFSIPLTKLGSAR*
Ga0180090_100548563300014866SoilGEAGFYQDSGSRTAKIAGLGYQYKLGRRWRLGGALLGVQSETYNDGRFFVAPIPILTYDLGPVKLNAIYVPRYGDYNAFAVFGFYFSMPLGR*
Ga0180087_100778153300014872SoilVEAGFYQDSGSRTAKIAGLGYQYKLGKRWRLGGAVLAIQSETYNDGDPFLAPIPILTYDLGPVKLNAIYVPRYGDYNAFAVFGFYFSLPLGR*
Ga0180064_102249533300014876SoilVEAGFYRDSGSHTAKIAGLGYQYKLGKRWRLGGALLGVQSETYNDGNFLLAPIPILTYDLGAVKLNAIYVPRYGEYNEFAVFGFYFSLPLGK*
Ga0180074_101440223300014877SoilLDNELNLGLGLNYTVQEDERGVAFVEAGFYRDSGSHLAKLAGMGYQYKLGKRWRLGGALVALQSQTYNRGNAFIAPLPILTYDFGAVTLNAIFVPSYGEYNRFAVFGFYFSLPLAK*
Ga0180069_101395913300014882SoilLDNELNLGLGLNYTVQEDERGVAFVEAGFYRDSGSHLAKLAGMGYQYKLGKRWRLGGALAALQSQTYNRGNAFIAPLPILTYDFGAVTLNAIFVPSYGEYNRFAVFGFYFSLPLAK*
Ga0180075_108620623300015252SoilLDNELNLGLGLNYTVQEDERGVAFVEAGFYRDSGSNLAKLAGMGYQYKLGKRWRLGGALVALQSQTYNRGNAFIAPLPILTYDFGAVTLNAIFVPSYGEYNRFAVFGFYFSLPLAK*
Ga0180073_113602713300015256SoilDRQGVRRNGLDNELNLGLGLNYTVQEDERGVAFAEAGFYRDSGSNLAKLAGIGYQYKLGKRWRLGGALVALQSQTYNRGNAFIAPLPIVTYDLGAVTLNAIFVPSYGEYNRFAVFGFYFTLPLGR*
Ga0180067_106094943300015257SoilVEAGFYRDSGSQVAKLAGLGYQIKLGERWRLGGALTAVHSQTYNDGRLFVAPIPILTYDMGPVKLNAIYVRRYGDYNQFAVFGFYFSVPLRSACGR*
Ga0180067_113142823300015257SoilVEAGLYGDSGNNLAKVAGIGYQYKLGKRWRLGGALLGVQSETYNDGNFLLAPIPILTYDLGAVKLNAIYVPRYGEYNEFAVFGFYFSLPLGK*
Ga0180085_112781913300015259SoilTGVGLNYAFHDDARGVGFVEAGFYRDSGDKVATLGGIGYQYKLGKYWRIGGALVGIQSETYNHGRFFVAPLPILTFDLGNMKLNTMYVPSYGEYNKYAVYGFYFSLPLAR*
Ga0132258_1028709033300015371Arabidopsis RhizosphereVSETERGIQFVEAGVYRDSGSRWAKIAGMGYQFKLGKRWRLGGALLGVQSDTYNGGTPFIAPLPIATYDLGRVKLNAVFAPHYGTYNPFATFGVYFSVPLAR*
Ga0132258_1259943523300015371Arabidopsis RhizosphereVSETERGVHFVEAGVYRDSGSRLAKIAGMGYQFKAGSRWRLGGALLGVQSDTYNGGTPFIAPVPIATYDLGRVKLNAIYAPHYGTQNPFSAFGFYLSVPLAR*
Ga0132255_10397631313300015374Arabidopsis RhizosphereLNLGLGLNYTLHEDERGVQFAEAGFYKDSGSRLAKLAGLGYQFKLGQRWRLGGALSAIQSETYNKGNLFVAPIPILTYDFGALKLNAIYVPRYDDYNKFAVFGFYFSVPLRSVFGR*
Ga0190268_1225737623300018466SoilLNLGLGLNYTMHEDERGIQFAEAGFYRDSGSHWAKIAGLGYQFKLGKRWRLGGALSAIHSETYNDGNLFVAPIPILTYDFGPLKMNAIYVPRYDDYNKFAVFGFYFSVPLRQ
Ga0180110_111915033300019208Groundwater SedimentDERGIQFVEAGFYRDSGSHTAKIAGLGYQYKLGKRWRLGGALLGVQSETYNDGNFLLAPIPILTYDLGAVKLNAIYVPRYGEYNEFAVFGFYFSLPLGK
Ga0180119_111381933300019228Groundwater SedimentGIQFVEAGFYRDSGSHLAKIAGLGYQYKLGKRWRLGGAVLGVQSESYNHGRFFLAPIPILTYDLGPVTLNGIYVPAYGDYNEFAVFGFYFSLPLGR
Ga0180119_127210813300019228Groundwater SedimentREGVEKNGLDNALNVGLGLNYTLHEDERGIQFVEAGFYRDSGSNTAKIAGLGYQYKLGKRWRLGGALLGVQSETYNDGKFLLAPIPILTYDLGAVKLNAIYVPRYGEYNEFAVFGFYFSLPLGK
Ga0180119_128649543300019228Groundwater SedimentVEAGFYQDSGSRTAKIAGLGYQYKLGRRWRLGGALLGVQSETYNDGRFFVAPIPILTYDLGPVKLNAIYVPAYGDYNEFAVFGFYFSMPLGR
Ga0180114_136593533300019232Groundwater SedimentVANEINLGLGLNYEFHESDLGIGFVEAGFYQDSGSRTAKIAGLGYQYKLGRRWRLGGALLGVQSETYNNGRFFVAPIPILTYDLGPVKLNAIYVPAYGDYNEFAVFGFYFSMPLGR
Ga0180115_118414123300019257Groundwater SedimentVEAGFYQDSGSRTAKIAGLGYQYKLGKRWRLGGAVLGVQSETYNDGRFFLAPIPILTYDLGPVKLNAIYVPAYGDYNEFAVFGFYFSMPLGR
Ga0180115_129538533300019257Groundwater SedimentGVQFAEAGFYRDSGSHTAKIAGLGYQYKLGKRWRLGGALLGVQSETYNDGNFLLAPIPILTYDLGAVKLNAIYVPRYGEYNEFAVFGFYFSLPLGK
Ga0180107_118109533300020064Groundwater SedimentVEAGFYRDSGSNTAKIAGLGYQYKLGKRWRLGGALLGVQSETYNDGNFLLAPIPILTYDLGAVKLNAIYVPRYGEYNEFAVFGFYFSLPLGK
Ga0206227_104486923300021063Deep Subsurface SedimentLDNELNIGLGLNYTVHEDERGVGFAEAGIYRDSGSNAAKLAGLGYQYKLGKRWRLGGALVAVHSQTYNRGNAFIAPLPIATYDLGPVKLNAIYVPKYGDYNHFATFGLYFSLPLAK
Ga0209109_10000861183300025160SoilVRRSGLDNQLNLGLGLNYTLHEDERGIGFAEAGFYRDSGSHVAKLAGVGYQYKYGSWRLGGALVGIQSPTYNDGRFFIAPLPILTYDLGAVKLNAVYVPRYGEYNKFAVFGFYFSVPLGK
Ga0209109_1012048523300025160SoilVRRSGLDNQLNLGLGLNKTLHEDERGIAFAEAGFYRDSGSHVAKLAGVGYQYKYGSWRLGGALVGIQSPTYNEGRFFIAPLPILTYDFGPVQLNAIYVPNYGEYNKFAVFGFYFSMPLGK
Ga0209109_1031173523300025160SoilLDNEINLGLGLNYTVQEDERGIAFAEAGFYRDSGSNLAKLAGIGYQYKLGKRWRLGGALVALQSQTYNRGNAFIAPLPILTYDLGAVTLNAIFVPSYGEYNRFAVFGFYFSLPLAK
Ga0209108_1000969113300025165SoilVRRSGLDNQLNLGLGLNYTLHEDERGIGFAEAGFYRDSGSHVAKLAGVGYQYKYGSWRLGGALVGIQSPTYNEGRFFIAPLPILTYDFGPVQLNAIYVPNYGEYNKFAVFGFYFSMPLGK
Ga0209108_1053603113300025165SoilLGLNHTFHEDERGIGFTEAGFYRDSGSRVAKLAGVGYQYKLGERLRLGGALLGVLSDTYNKGRFFIAPVPMLAYDLGPVQLNVTYVPRYRNYNKFAVFGFFFSFPLGK
Ga0209002_1041813513300025289SoilVRRSGLDNQLNIGLGLNYTLHEDERGIGFAEAGFYRDSGSHVAKLAGVGYQYKYGSWRLGGALVGIQSPTYNEGRFFIAPLPILTYDFGPVQLNAIYVPNYGEYNKFAVFGFYFSMPLGK
Ga0209640_1031455023300025324SoilLDNELNLGFGLNYTIQEDERGVWFAEAGFYRDSGSHLAKLAGMGYQYKLGKRWRLGGALVALQSQTYNRGNAFIAPLPIVTYDLGAVTLNAIFVPSYGEYNRFAVFGFYFSLPLAK
Ga0209474_1024250313300026550SoilGAREGGFDNQLNLGVGLNYTVSESERAIQFVEAGLYRDSGSRLAKIAGMGYQYKVGKRWRLGGALLGIQSQTYNGGSPFIAPLPIVTYDLGRVKLNAVFAPHYGSYNPFATFGFYFSAPLAR
Ga0209474_1056095123300026550SoilLDNELNLGLGLNYTVHEDERGIQFVGAGFYRDSGSRLAKLAGMGYQYKLGRWRLGGALLGVQSETYNHGRAFIAPLPILTYDLGRVKLNAVYAPRYGQYNEFAVFGFYFSVPLRQSP
Ga0208185_1000033373300027533SoilVEAGFYRDSGSHTAKIAGLGYQYKLAKRWRLGGALLAVQSGTYNHGRLFVAPIPILTYDLGAVKLNAIYVPSYGEYNEFAVLGFYFSLPLGR
Ga0208454_100399143300027573SoilVEAGFYQDSGSRTAKIAGLGYQYKLGRRWRLGGALLGVQSETYNDGRFFVAPIPILTYDLGPVKLNAIYVPAYGEYNEFAVFGFYFSMPLGR
Ga0208454_110445523300027573SoilVEAGFYRDSGSHTAKLAGLGYQYKLGKRWRLGGAVLAIQSETYNDGDPFLAPIPILTYDLGPVKLNAIYVPRYGDYNAFAVFGFYFSMPLGR
Ga0307503_1007104913300028802SoilLGYTFHEDERGAAFVEAGFYQDSGSHVAKLAGAGYQFKLGERWRLGGALAGIDSPTYNHGRFFVAPLPTATYDLGAVKLNAIYVPRYQQNRFAVFGLYFSIPLSSNALP
Ga0302046_1036366123300030620SoilVRRNGLDNELNLGLGLNYTAHEDERGIGFVEAGLYRDSGSRLAKIAGVGYQAKLDKRWRLGGALLAVQSETYNHGNAFIAPLPILTYDLGSVKLNAVYIPRYGDYNRFAVLGLYFSLPLS
Ga0302046_1114393323300030620SoilGARRSGVDNALNLGLGLNYTLHEDERGIGFAEAGFYRDSGSHVAKLAGVGYQYKLGKRWRLGGALVGIQSRTYHDGRFFIAPLPMLSYDLGAVTLNAIYVPRYGEYNKFAVFGFYFSVPLRN
Ga0302046_1138765213300030620SoilLIEDERGIGFAEAGYFRDSGSHVAKLAGVGYQYKLGKRWRLGGALVGVQSATYNNGRFFIAPLPILTYDLGAVKLNAIYIPKYGDYNQFAVYGFYFTMPLGE
Ga0307498_1007592923300031170SoilVNLGLGLNYTVHEDERGIGFVEAGFYQDSGSNTAKLAGAGYQYKLGKSWRLGGALVGLKSPTYNHGNFFIAPLPILTYDFGPVQVNAIYVPKYGDYNEFAVFGLYFSLPLGR
Ga0307497_1009193123300031226SoilMHEDERGIQFAEAGFYRDSGSHIAKLAGLGYQFKLGKSWRLGGALSAIHSETYNKGNLFVAPIPILTYDFGRVKLNAIYVPRYDEYNRFAVFGFYFSVPLKQ
Ga0307469_1021626133300031720Hardwood Forest SoilLGFVEAGFYRDSATNVAKIAGAGYQFKFGERWRLGGALVGVDSPSYNHGRFFIAPLPMATYDLGAVKLNAIYAPRFEGNRFAVFGLYFSIPLAPIASP
Ga0307469_1100997923300031720Hardwood Forest SoilRQKIRRNRLDNQLNLGLGLNYTFDEDARGLAFVEAGFYRDSGSNVAKLAGVGYQFKLGEHWRLGGALVGVDSPTYNRGRFFVAPLPIVTFDLGAVKLNAMYVPRYGTYNRFAAFGFYFGIPLGK
Ga0307468_10002430323300031740Hardwood Forest SoilVSETERGVQFVEAGVYRDSGSRWAKVAGMGYQFKLGKRWRLGGALLGVQSDTYNGGTPFIAPLPIATYDLGRVKLNAVFVPHYGTYNPFATFGFYFSVPLAR
Ga0307473_1046376123300031820Hardwood Forest SoilLGYTFHEDERGAGFVEAGFYQDSGSHWAKLAGAGYQFKLGERWRLGGALAGIDSPTYNHGRFFVAPLPMATYDLGAVKLNALYVPRYQHNRFAAFGLYFSIPLPHNVLP
Ga0307473_1151446913300031820Hardwood Forest SoilQLNLGLGLNYTVSESARGIQFVEAGFYRDSGSHIAKIAGMGYQYKLGGHWRLGGALLGVQSETYNGGSPFIAPVPILTYDLGRVKLNAVYIPSYGDYNPFAVFGFYFSLPLAR
Ga0326597_1001189653300031965SoilVRRTGLGNQLNLGLGLNYTLHEDDRGISFAEVGFYRDSGSHVAKLAGVGYQYKLGERWRLGGALVGIHSQTYNDGKFLIAPLPMLTYDLGAVKLNAIYVPRYGEYNKFAVFGFYFTVPLG
Ga0326597_1014000633300031965SoilVRRSGLDNQLNLGLGLSYTLHEDERGIGFAEAGFYRDSGSHVAKLAGVGYQYKYGSWRLGGALVGIQSPTYNDGRFFIAPLPILTYDLGAVKLNAVYVPRYGEYNKFAVFGFYFSVPLGK
Ga0326597_1118793823300031965SoilLNLGLGLNYTLHEDDRGIGFAEVGFYRDSGSHVAKLAGVGYQYKLGERWRLGGALVGIHSPTYNDGRFFIAPLPMLTYDLGAVKLNAIYVPRYGEYNKFAVFGFYFTVPLGQ
Ga0326597_1141599023300031965SoilVHAYGFSYHTDRQGVRRSGLDNQLNLGLGLNKTLHEDERGIAFAEAGFYRDSGSHVAKLAGVGYQYKYGSWRLGGALVGIQSPTYNEGRFFIAPLPILTYDFGPVQLNAIYVPNYGEYNKFAVFGFYFSMPLGK
Ga0326597_1149401213300031965SoilKRGIGFVEAGFYRDSGSRPAKIAGVGYQAKLDKRWRLGGALLAVQSKTCNDGSAFIAPLPILTCDLGKVKLNAVYIPRYGEYNQFAVFGFYLSVPLAEGD
Ga0315910_1155513223300032144SoilDREGVHREGLDNELNLGLGLNYTMHEDEHGIQFAEAGFYEDSGSHLAKLAGIGYQFKLGRRWRLGGALSAIHSETYNDGNLFVAPIPILTYDFGPVKLNAIYVPRYGDYNRFAVFGFYFSVPLRSAFDR
Ga0307471_10018295233300032180Hardwood Forest SoilVSLCAPSSAPPSLNYTVSETERGVQFVEAGVYRDSGSRWAKVAGMGYQFKFGKRWLLGGALLGVQSDTYNGGTPFIAPLPIATYDLGRVKLNAVFVPHYGTYNPFATFGFYFSVPLAR
Ga0307471_10031336343300032180Hardwood Forest SoilLDNELNLGLGLNYTLHEDERGIQFVEAGFYRDSGSRVAKIAGMGYQYKLDRWRLGGALIGVQSQTYNHGSAFIAPLPILTYDLGRVQLNAIYVPRYGDYNQFAVFGFYFSVPLRQSP
Ga0307471_10191885033300032180Hardwood Forest SoilGLNYTVSESARGIQFVEAGFYKDSGSNLAKIAGLGYQYKVGKRWRLGGALLGVQSKTYNNGSFFVAPVPIVTYDLGPVKLNAIYVPRYGDYNDFAVFGFYFSVPLGK
Ga0307471_10256971323300032180Hardwood Forest SoilLGYTFHEDERGAGFVEAGLYQDSGSHWAKLAGAGYQFKLGERWRLGGALAGLDSPTYNHGRFFVAPLPMVTYDLGAVKLNAIYVPRYQQNRFAVFGLYFSIPLSPNVLP
Ga0307472_10112914023300032205Hardwood Forest SoilLGYTFHEDERGAGFVEAGFYQDSGSHWAKLAGVGYQFKLGERWRLGGALAGIDSPTYNHGRFFVAPLPMVTYDLDAVKLNAIYVPRYQQNRFAVFGLYFSIPLSPNVLP
Ga0307472_10247821723300032205Hardwood Forest SoilQFHEDARSVAFVEAGFYRDSGSTLAKIAGVGYQFKLGERWRLGGALVGVHSPTYNRGRSFIAPLPIVTYDLGPVQLNAIYVPRYGDYNRFAVFGFYFSVPFGK
Ga0214472_1063882543300033407SoilVEAGLYRDSGSHTAKIAGLGYQYKLGKRWRLGGALLAVQSQTYNDGSLFVAPIPILTYDLGAVKLNAIYVPRYGDYNEFAVFGFYFSLPLPSGRRPDR
Ga0214472_1156490113300033407SoilVRRNGLDNELNLGLGLNYTVHEDERGVGFAEAGFYRDSGSHLAKIAGLGYQYKLGRRWRLGGALVGVHSPTYNRGRFFVAPLPIATYDLGAVKLNAIYIPRYGDYNAFAVVGFYFSVPLS
Ga0214471_1006880933300033417SoilVHREGLDNELNIGLGLNYTLHEDERGIQFVEAGLYRDSGSHTAKIAGLGYQYKLGKRWRLGGALLAVQSQTYNDGSLFVAPIPILTYDLGAVKLNAIYVPRYGDYNEFAVFGFYFSLPLPSGRRPDR
Ga0364934_0330306_184_5343300034178SedimentLDNELNLGLGLNYTVQEDERGVAFAEAGFYRDSGSNLAKLAGIGYQYKLGKRWRLGGALVALQSQTYNRGNAFIAPLPILTYDFGAVTLNAIFVPSYGEYNRFAVFGFYFSLPLAK

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.