Metagenome / Metatranscriptome Family F081089

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081089
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	98 residues
Representative Sequence	MNVQRHLLLLVTLAATVIPASGQQFAPAATSANIGARSAASILDFSGIWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDYSSLVGDYKNPILQPWAADVVKK
Number of Associated Samples	98
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.46 %
% of genes near scaffold ends (potentially truncated)	96.49 %
% of genes from short scaffolds (< 2000 bps)	92.98 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (71.053 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.930 % of family members)
Environment Ontology (ENVO)	Unclassified (26.316 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.632 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 17.56% β-sheet: 1.53% Coil/Unstructured: 80.92%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF13531	SBP_bac_11	4.39
PF00378	ECH_1	3.51
PF13570	PQQ_3	2.63
PF08450	SGL	2.63
PF03693	ParD_antitoxin	1.75
PF03401	TctC	0.88
PF13458	Peripla_BP_6	0.88
PF13432	TPR_16	0.88
PF00816	Histone_HNS	0.88
PF00440	TetR_N	0.88
PF00903	Glyoxalase	0.88
PF04072	LCM	0.88
PF02668	TauD	0.88
PF00005	ABC_tran	0.88
PF04909	Amidohydro_2	0.88
PF02626	CT_A_B	0.88
PF08241	Methyltransf_11	0.88
PF00116	COX2	0.88
PF01425	Amidase	0.88
PF02684	LpxB	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	2.63
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	2.63
COG3609	Transcriptional regulator, contains Arc/MetJ-type RHH (ribbon-helix-helix) DNA-binding domain	Transcription [K]	1.75
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.88
COG0763	Lipid A disaccharide synthetase	Cell wall/membrane/envelope biogenesis [M]	0.88
COG1622	Heme/copper-type cytochrome/quinol oxidase, subunit 2	Energy production and conversion [C]	0.88
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.88
COG2916	DNA-binding protein H-NS	Transcription [K]	0.88
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.88
COG3315	O-Methyltransferase involved in polyketide biosynthesis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.88
COG4263	Nitrous oxide reductase	Inorganic ion transport and metabolism [P]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.05 %
Unclassified	root	N/A	28.95 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.05 %
Unclassified	root	N/A	28.95 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.05 %
Unclassified	root	N/A	28.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	38.60 %
Unclassified	root	N/A	28.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	22.81 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	35.96 %
Unclassified	root	N/A	28.95 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9.65 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	9.65 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	2.63 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.88 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	35.96 %
Unclassified	root	N/A	28.95 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	9.65 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.14 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	2.63 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.88 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.88 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	35.96 %
Unclassified	root	N/A	28.95 %
Betaproteobacteria bacterium 13_1_20CM_3_63_8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_20CM_3_63_8	8.77 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	2.63 %
Alsobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae	1.75 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.88 %
Parvibaculaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae	0.88 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.88 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.88 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.88 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.88 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	35.96 %
Unclassified	root	N/A	28.95 %
Betaproteobacteria bacterium 13_1_20CM_3_63_8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_20CM_3_63_8	8.77 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	2.63 %
Alsobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter	1.75 %
Mangrovicoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Mangrovicoccus	0.88 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.88 %
Propionibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	0.88 %
Anderseniella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Anderseniella	0.88 %
Xanthomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas	0.88 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.88 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	35.96 %
Unclassified	root	N/A	28.95 %
Betaproteobacteria bacterium 13_1_20CM_3_63_8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_20CM_3_63_8	8.77 %
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	2.63 %
unclassified Alsobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter → unclassified Alsobacter	1.75 %
Mangrovicoccus ximenensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Mangrovicoccus → Mangrovicoccus ximenensis	0.88 %
Acidipropionibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Acidipropionibacterium	0.88 %
unclassified Anderseniella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Anderseniella → unclassified Anderseniella	0.88 %
Xanthomonas hortorum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas hortorum	0.88 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.88 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.88 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	35.96 %
Unclassified	root	N/A	28.95 %
Betaproteobacteria bacterium 13_1_20CM_3_63_8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_20CM_3_63_8	8.77 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	2.63 %
Alsobacter sp. SYSU M60028	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter → unclassified Alsobacter → Alsobacter sp. SYSU M60028	1.75 %
Anderseniella sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Anderseniella → unclassified Anderseniella → Anderseniella sp.	0.88 %
Mesorhizobium sp. AR02	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. AR02	0.88 %
Acidipropionibacterium jensenii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Acidipropionibacterium → Acidipropionibacterium jensenii	0.88 %
Mangrovicoccus ximenensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Mangrovicoccus → Mangrovicoccus ximenensis	0.88 %
Xanthomonas hortorum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas hortorum	0.88 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.88 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004091\|Ga0062387_101530462	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300004092\|Ga0062389_100835561	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1102	Open in IMG/M
3300004092\|Ga0062389_100922140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Anderseniella → unclassified Anderseniella → Anderseniella sp.	1057	Open in IMG/M
3300004092\|Ga0062389_101516555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	854	Open in IMG/M
3300005176\|Ga0066679_10757612	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300005181\|Ga0066678_10474278	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300005181\|Ga0066678_10951851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Acidipropionibacterium → Acidipropionibacterium jensenii	559	Open in IMG/M
3300005332\|Ga0066388_103820692	Not Available	768	Open in IMG/M
3300005363\|Ga0008090_15482714	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300005538\|Ga0070731_11069186	Not Available	533	Open in IMG/M
3300005555\|Ga0066692_10625305	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300005713\|Ga0066905_100564696	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	957	Open in IMG/M
3300005764\|Ga0066903_100414811	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	2225	Open in IMG/M
3300005764\|Ga0066903_102961112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_20CM_3_63_8	920	Open in IMG/M
3300005764\|Ga0066903_104799316	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300005993\|Ga0080027_10078931	All Organisms → cellular organisms → Bacteria	1217	Open in IMG/M
3300006031\|Ga0066651_10409558	Not Available	722	Open in IMG/M
3300006031\|Ga0066651_10580714	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300006031\|Ga0066651_10632498	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300006046\|Ga0066652_101348509	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300006050\|Ga0075028_100430570	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300006800\|Ga0066660_11645664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas hortorum	510	Open in IMG/M
3300006953\|Ga0074063_10902275	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300007258\|Ga0099793_10489967	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300009012\|Ga0066710_101692102	Not Available	963	Open in IMG/M
3300009012\|Ga0066710_103286964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_20CM_3_63_8	618	Open in IMG/M
3300009698\|Ga0116216_10848648	Not Available	547	Open in IMG/M
3300009700\|Ga0116217_10658049	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300010043\|Ga0126380_10883201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_20CM_3_63_8	741	Open in IMG/M
3300010046\|Ga0126384_11100484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_20CM_3_63_8	728	Open in IMG/M
3300010046\|Ga0126384_11114405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_20CM_3_63_8	724	Open in IMG/M
3300010047\|Ga0126382_10021513	All Organisms → cellular organisms → Bacteria	3368	Open in IMG/M
3300010049\|Ga0123356_11942734	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300010358\|Ga0126370_10407828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter → unclassified Alsobacter → Alsobacter sp. SYSU M60028	1119	Open in IMG/M
3300010358\|Ga0126370_10618767	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	938	Open in IMG/M
3300010358\|Ga0126370_11528113	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300010358\|Ga0126370_11602857	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300010360\|Ga0126372_10783067	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	942	Open in IMG/M
3300010360\|Ga0126372_12102043	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300010360\|Ga0126372_12812835	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300010366\|Ga0126379_11091726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter → unclassified Alsobacter → Alsobacter sp. SYSU M60028	904	Open in IMG/M
3300010366\|Ga0126379_12735528	Not Available	590	Open in IMG/M
3300010379\|Ga0136449_104159272	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300010398\|Ga0126383_12310496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_20CM_3_63_8	623	Open in IMG/M
3300011271\|Ga0137393_11044786	Not Available	695	Open in IMG/M
3300012096\|Ga0137389_11658322	Not Available	535	Open in IMG/M
3300012189\|Ga0137388_10324779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. AR02	1415	Open in IMG/M
3300012199\|Ga0137383_10553347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_20CM_3_63_8	842	Open in IMG/M
3300012202\|Ga0137363_10696899	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	860	Open in IMG/M
3300012207\|Ga0137381_10988161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	726	Open in IMG/M
3300012285\|Ga0137370_10468033	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	769	Open in IMG/M
3300012349\|Ga0137387_10710902	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300012357\|Ga0137384_10886017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Mangrovicoccus → Mangrovicoccus ximenensis	719	Open in IMG/M
3300012362\|Ga0137361_10067226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3021	Open in IMG/M
3300012469\|Ga0150984_117160742	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300012582\|Ga0137358_10550074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_20CM_3_63_8	776	Open in IMG/M
3300012683\|Ga0137398_10034734	All Organisms → cellular organisms → Bacteria	2887	Open in IMG/M
3300012685\|Ga0137397_11259558	Not Available	529	Open in IMG/M
3300012917\|Ga0137395_10173367	All Organisms → cellular organisms → Bacteria → Proteobacteria	1489	Open in IMG/M
3300012918\|Ga0137396_10773001	Not Available	707	Open in IMG/M
3300012930\|Ga0137407_12353254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300012944\|Ga0137410_11468168	Not Available	594	Open in IMG/M
3300012971\|Ga0126369_13252950	Not Available	532	Open in IMG/M
3300015241\|Ga0137418_10167996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1920	Open in IMG/M
3300015245\|Ga0137409_11584447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300015374\|Ga0132255_104680268	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300016294\|Ga0182041_12122392	Not Available	524	Open in IMG/M
3300016387\|Ga0182040_10826782	Not Available	765	Open in IMG/M
3300017947\|Ga0187785_10095760	Not Available	1181	Open in IMG/M
3300017959\|Ga0187779_11107946	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300018007\|Ga0187805_10133362	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1128	Open in IMG/M
3300018061\|Ga0184619_10003088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6093	Open in IMG/M
3300018468\|Ga0066662_12709260	Not Available	525	Open in IMG/M
3300018482\|Ga0066669_11124919	Not Available	709	Open in IMG/M
3300019888\|Ga0193751_1224625	Not Available	605	Open in IMG/M
3300020580\|Ga0210403_11190710	Not Available	587	Open in IMG/M
3300021406\|Ga0210386_11510484	Not Available	560	Open in IMG/M
3300021476\|Ga0187846_10234542	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	764	Open in IMG/M
3300021478\|Ga0210402_10031111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4613	Open in IMG/M
3300026340\|Ga0257162_1025292	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	721	Open in IMG/M
3300026482\|Ga0257172_1009285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1588	Open in IMG/M
3300026489\|Ga0257160_1038760	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300026557\|Ga0179587_10503580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_20CM_3_63_8	795	Open in IMG/M
3300027903\|Ga0209488_10922164	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300028814\|Ga0307302_10229296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_20CM_3_63_8	909	Open in IMG/M
3300028906\|Ga0308309_11358545	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300031226\|Ga0307497_10780286	Not Available	500	Open in IMG/M
3300031546\|Ga0318538_10330962	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300031561\|Ga0318528_10368543	Not Available	771	Open in IMG/M
3300031708\|Ga0310686_115983752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300031736\|Ga0318501_10421081	Not Available	723	Open in IMG/M
3300031740\|Ga0307468_100548659	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	930	Open in IMG/M
3300031770\|Ga0318521_10314766	Not Available	923	Open in IMG/M
3300031771\|Ga0318546_11002613	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300031781\|Ga0318547_10721357	Not Available	620	Open in IMG/M
3300031792\|Ga0318529_10305832	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300031819\|Ga0318568_10472408	Not Available	782	Open in IMG/M
3300031823\|Ga0307478_11756889	Not Available	510	Open in IMG/M
3300031835\|Ga0318517_10327046	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300031910\|Ga0306923_10055954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4367	Open in IMG/M
3300031942\|Ga0310916_10533957	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	999	Open in IMG/M
3300031945\|Ga0310913_10828742	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300031946\|Ga0310910_10285018	All Organisms → cellular organisms → Bacteria → Proteobacteria	1297	Open in IMG/M
3300031946\|Ga0310910_10514953	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	950	Open in IMG/M
3300031947\|Ga0310909_10141921	All Organisms → cellular organisms → Bacteria	1968	Open in IMG/M
3300032001\|Ga0306922_11116274	Not Available	807	Open in IMG/M
3300032035\|Ga0310911_10257110	Not Available	1001	Open in IMG/M
3300032044\|Ga0318558_10682038	Not Available	514	Open in IMG/M
3300032059\|Ga0318533_11146535	Not Available	569	Open in IMG/M
3300032091\|Ga0318577_10623451	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300032261\|Ga0306920_101410274	Not Available	998	Open in IMG/M
3300032892\|Ga0335081_10635920	All Organisms → cellular organisms → Bacteria → Proteobacteria	1309	Open in IMG/M
3300034268\|Ga0372943_1160209	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.37%
Host-Associated	Host-Associated	2.63%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.35%
Aquatic	Environmental → Aquatic	7.02%
Plants	Host-Associated → Plants	1.75%
Arthropoda	Host-Associated → Arthropoda	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.47%
Freshwater	Environmental → Aquatic → Freshwater	5.26%
Sediment	Environmental → Aquatic → Sediment	1.75%
Cave	Environmental → Terrestrial → Cave	0.88%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.88%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.70%
Loam	Environmental → Terrestrial → Soil → Loam	5.26%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.39%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.51%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.75%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.88%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.88%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.88%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.35%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.07%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.40%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.26%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.51%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.75%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.88%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.88%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.88%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.88%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.88%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.30%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.39%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.39%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.51%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.51%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.63%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.75%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.75%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.88%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.88%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.88%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.88%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.88%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.88%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.88%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.88%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026340	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-A	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062387_1015304621	3300004091	Bog Forest Soil	MKVQRHLLLLVTLATGVTAALGQQVVPVAAPTNVGAQSAGPIPDFSGIWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDYGSLVGDYKNPILQPWAADVVKKKG
Ga0062389_1008355611	3300004092	Bog Forest Soil	MNMQRHLLLLVTLATGVSAASGQQVAPAAVPANLGAQSAASVPDFSGIWRHGNLPWLIPPASGPGPVTNLSREKETGVSDYGSL
Ga0062389_1009221402	3300004092	Bog Forest Soil	MKVQRHLLLLVTLATGVTAALGQQVVPVAAPTNVGAQSAGPIPDFSGIWRHGNLPWFIPPASGPGPVTNLSREK
Ga0062389_1015165552	3300004092	Bog Forest Soil	MIVQRHLLLLVTLATGVAAASAQPVVPAAAPANLGAQSAGPIPDFSGIWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDYGSLVGDYKNPILQPW
Ga0066679_107576122	3300005176	Soil	MNAQRHLILLVTLAVGIAAGAEPQVAPAATPANLGEQSAASIPDFSGIWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDYGSLVGDYKNPILLPWAADVVKKKGELSLAG
Ga0066678_104742781	3300005181	Soil	MKMQRHLLLLVTLGAAAIPASGQQVTPAAGPANIGAQNAASIPDFSGVWRHGNLPWFIPPASGPGPVTNRSRNEQGTSNYSQLVGDYTNP
Ga0066678_109518511	3300005181	Soil	MNVQRHLLLLVTLAATVIPASGQQFAPAATSANIGARSAASILDFSGIWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDYSSLVGDYKNPILQPWAADVVKK
Ga0066388_1038206922	3300005332	Tropical Forest Soil	MSAQRYLLVVTMVAAVIPASAQQVIPTAAPAILGTQNVTSVPDFSGIWRHGNLPWFIPPASGPGPVTNLSREKGTGVS
Ga0008090_154827142	3300005363	Tropical Rainforest Soil	MNVQRHLLSLVTSATLMTFACGPHVGPAAAPVDAAARSAESIPDFSGVWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDYGSLVGDYKNPILQPWAAEVVK
Ga0070731_110691861	3300005538	Surface Soil	MNTQRHLLLLATLATAITLASGQTFRAAPVGAQSAASIPDFSGIWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDYSSLVGDYKNPILKPW
Ga0066692_106253052	3300005555	Soil	MNMQRHLLLLVTLAAAAIPASGQQVTPAAGPANIGAQNAVSIPDFSGVWRHGNLPWFIPPASGPGPVTNRSRNEQGTSNYNQLVGDYANPILQPWAADLVKKKGE
Ga0066905_1005646962	3300005713	Tropical Forest Soil	MRVPQSDANFGVGTPANHEGVIVMNVRRPLLLMVTLAVTAIPASGQQRVPEAMPANIGVQRSAIPDFSGIWRHGNLPWFIPPASGPGPVTNLSRTKDTGVSDYSSLVGDYKNPILQPWAADVVKKKGE
Ga0066903_1004148113	3300005764	Tropical Forest Soil	MAAAVIPASAQRVVHIAATANIGAQNAAPVPDFSGIWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDY
Ga0066903_1029611121	3300005764	Tropical Forest Soil	MNAQWHLLLMVTLAAVTPASAQQVMPGATPASVGVQRPTSMPDFSGIWRHGNLPWFIPPASGPGPVTNLSRTKDTGVSDYSSLVGDY
Ga0066903_1047993162	3300005764	Tropical Forest Soil	MNVQRHLLLMVTLAAAVSPASGQQVAPGVTPANIGVQRSASIPDFSGIWRHGNLPWFIPPASGPGPVRNLSRTKDTGVSDYSSLVGDYKNPILQPWAADVVKKKGELSL
Ga0080027_100789311	3300005993	Prmafrost Soil	MNVHRNLLVLMTLAAAAGPASGQQAPPAAGQANIGQQSVASIPDFSGTWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDYGSLVGDYKNPI
Ga0066651_104095582	3300006031	Soil	MNLQRHLLLLVILAAAVSPASGQQVAPMAGPATIGAQSTASIPDFSGIWRHGNLPWFIPPSSGPGPVTNLSREQGTGVSDYSSLVGD
Ga0066651_105807142	3300006031	Soil	MNVQRHLLLMVTLAAAVTPASGQQVAPAATPANIGAQRSAFILDFSGIWRHGNLPWFIPPASGPGPVTNLSRTRDTGVSDYSSLVGDYKNPILQPWAADVVKK
Ga0066651_106324982	3300006031	Soil	MNMQRHLLLLMTLVAAAIPASGQQVTPAAGPANIGTQNAASTPDFSGVWRHGNLPWFIPPASGPGPVTNRSRNEQGTSNYSQLVGDYTNPILQPWAADVVKKKGELSIAGVTYPNPGN
Ga0066652_1013485091	3300006046	Soil	MLVLGDDYSLTPANHAEEVAVNVQQAFLLCVTLLATSALGQTAAPETAPANRSTQSTTPVPDFSGIWRHGNLPWFIPPASGPAPVTNKSRNAQGTSDYGSLVGDYTNPILQPWAAEVVRKKGELS
Ga0075028_1004305702	3300006050	Watersheds	MNMQRHLLLLVILATGVPAASGQQVAPVAAPANLGAQSAASVPDFSGIWRHGNLPWFIPPASGPGPVTNLSRERGTGVSDYSSLVGDYKNPILQPWAADVVKKKGE
Ga0066660_116456641	3300006800	Soil	MNAQRHLLLLVTLTAAVTPASGQQVVPAAAPAKAGAQSAATVPDLSGIWRHGNLPWFIPPASGPGPVTNLSREKATGVSDYSSLVGDYKNPILQPWAADVVKKKGDLSLAGVTFPNPANTCW
Ga0074063_109022752	3300006953	Soil	MTAERHLLLLLLLAVAATPASGQQMAPAAAPAKPVAQSVASIPDFSGVWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDYSSLVGDHKNPILQPWAADVVKKKGDISLAG*
Ga0099793_104899671	3300007258	Vadose Zone Soil	MNMQRHFLLLATLAVITLASAKQFAPAAASANLATQSTASIPDFSGIWRHGNLPWFIPPASGPGPVRNLSREKGTGVSDYSSLVGDYRNPILQPWAADVVK
Ga0066710_1016921021	3300009012	Grasslands Soil	MNLQRHLLLLVISAAAVTPASGQQVAPAARPANIGTQSAASSPDFSGIWRHGNLPWFIPPASGPGPVTNLSREK
Ga0066710_1032869642	3300009012	Grasslands Soil	MNVQRHLLLMVTLAATVIPAYGQQRVREAMPANVGVQSSASIPDFSGIWRHGNLPWFIPPASGPGPVTNLSRTKDTGVSDYSSLVGDYKNPILQAWA
Ga0116216_108486481	3300009698	Peatlands Soil	MAAHRNFLLLVTLAAAVATPVLGQVATPATAPAKSGQHAAVPDFSGIWRHGNLPWFIPPASGPGPVTNLSREKG
Ga0116217_106580491	3300009700	Peatlands Soil	MTAHRNFLLLVTLAAAVATPALGQVATPATAPAKSGQHAAVPDFSGIWRHGNLPWFIPPASGPGPVTNLSREKGSGVSDYSSLVGDYKNPILQPWAAEVVKK
Ga0126380_108832011	3300010043	Tropical Forest Soil	MNAQRQLLLMVTLAATVIPAFGQQGVPQAVPTNIGVQSSASIPDFSGIWRHGNLPWFIPPASGPGPVTNLSRTKDTGVSDYSSLVGDYKNPILQPWAAEVVKKKGDLSLAGVVF
Ga0126384_111004841	3300010046	Tropical Forest Soil	MNVQRHLLLMVTLAAAVAPAFGQQRVPEATPANIGVQSSASLPDFSGIWRHGNLPRFIPPASGPGPVTNLSRTKDSGV
Ga0126384_111144051	3300010046	Tropical Forest Soil	MNVQWHLLLMVTLAATVIPASGQQVVPKATPANIGVQTSIPDFSGIWRHGNLPWFIPPASGPGPVTNLSRTKDTGVSDYSSLVGDYKNPILQAWAADVVKKKGEL
Ga0126382_100215131	3300010047	Tropical Forest Soil	MNVQRHLLLMVTFAAAASAAYAQQAVPGPTLANVGVQASASVPDFSGIWRHGNLPWFIPPASGPGPVTNLSRTKDTGVSDYSSLVGDYKNPILQPWAAEVVKKKGELS
Ga0123356_119427341	3300010049	Termite Gut	MNPQPHLLLLATLAVPIILASAQPLPAAPANVAAHSAASVPDFSGVWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDYGSLVGDYKNPILKPWAAEVVRKKGELSLAG
Ga0126370_104078282	3300010358	Tropical Forest Soil	MKVQRHFLLLVTLAAGTSAVGQHLVPAAAPTNIGAQSAAPIPDFSGIWRHGNLPWFIPPASGPGPVTNLSRT
Ga0126370_106187671	3300010358	Tropical Forest Soil	MSARQYLLLVTMAAAVIPASAQQVVPTAAPANIGSQNAAPAPDFSGIWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDYGSLVGDYKNPILQPWAADVVKKQGELSLAGITFPSP
Ga0126370_115281132	3300010358	Tropical Forest Soil	MNVQRHLLLMVTLAAAVSPASGQQVAPGVTPANIGVQRSASIPDFSGIWRHGNLPWFIPPASGPGPVRNLSRTKDTGVSDYSSQVGDYKNPILQPWAADVVKKKGELSLACVVFP
Ga0126370_116028572	3300010358	Tropical Forest Soil	MNAQWHLLLMVTLAAAVTPASGQQVVPEATRANIGVQMSTSIPDFSGIWRHGNLPWFIPPASGPGPVTNLSRTKDTGVSDYSSLVGDYKNPILQAWAADVVKKKGDLSLAGVVFPNPA
Ga0126372_107830671	3300010360	Tropical Forest Soil	MSARQYLLLVTMAAAVIPASAQQVVPTAAPANIGSQNAAPAPDFSGIWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDYGSLVGDYKNPILQPWAADVVKKQGEL
Ga0126372_121020432	3300010360	Tropical Forest Soil	MSAQRYLLLVTMVAAIIPASAQQRIPTVAPANIGTQNAAPVPDFSGIWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDYGSLVGDYKNPILQPWAADLVKK
Ga0126372_128128351	3300010360	Tropical Forest Soil	MSARQYLLLVTMAAAVIPASAQQLVPTAAPANIGSQNAAPAPDFSGIWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDYGSLVGDYKNPILQPWAADVVKKH
Ga0126379_110917261	3300010366	Tropical Forest Soil	MKVQRHFLLLVTLAAATSAVGQQLVPAAAPANIGAQSVASIPDFSGIWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDYSSLVGDYKNPILQPWAAEVVKKKGELSL
Ga0126379_127355282	3300010366	Tropical Forest Soil	MNVQRHLLLMVTLAAAVSPASGQQVAPGVTPANIGVQRSASIPDFSGIWRHGNLPWFIPPASGPGPVRNLSRTKDTGVSDYSSLVGDYKN
Ga0136449_1041592721	3300010379	Peatlands Soil	MAAHRNFLLLVTLAAAVATPVLGQVATPATAPAKSGQHAAVPDFSGIWRHGNLPWFIPPASGPGPVTNLSREKGSGVSDYSSLVGDYKNPILQPWAAEVVRKKAERRLAGVTSPSPSNTS
Ga0126383_123104961	3300010398	Tropical Forest Soil	MNAQRHLLLMVTLAATVIPASGQQGMPQAVPANIGVQGSASIPDFSGIWRHGNLPWFIPPASGPGPVTNLSRTKDTGVSDYSSLVGDYKNP
Ga0137393_110447861	3300011271	Vadose Zone Soil	MNVQRPLLLLVTLAAAVTPAWGQKLTAATASIGVQTAASIPDFSGIWRHGNLPWFIPPASGPGPVTNLSREQGTGVSD
Ga0137389_116583221	3300012096	Vadose Zone Soil	MNHEGEIDMNVRWHLLFMVTLSAVVTPASGQQVMPAVAPANIGAKSAVSIPDFSGIWRHGNLPWFIPPASGPGPVTNLSRERGTGVSDYSSLVG
Ga0137388_103247791	3300012189	Vadose Zone Soil	MVRQRHFLLLATLAAATIPAVGQQFAPAAVQAKLGAPNAASVPDFSGIWRHGNLPWFIPPASGPGPVRNLSREKGTGVSDYSSLVGDYKNPILQPW
Ga0137383_105533472	3300012199	Vadose Zone Soil	MDVQRHFLLMVTLAAAVTPASRQQAVHEAAPANVGVQMSASVPDFSGLWRHGNLPWFIPPASGPGPVTNLSRTTDTGVSDYSSLVGDY
Ga0137363_106968991	3300012202	Vadose Zone Soil	MNMQRHFLLLATVAAITLALAQQFAPTAAPANPGAQSAASIPDFSGIWRHGNLPWFIPPASGPGPVRNLSREKGTGVSDYSSLVGDYKNPILQPWAADVVKKKGELS
Ga0137381_109881611	3300012207	Vadose Zone Soil	MNLQKHLLLLAIMAVAAGPAAGQVTPAAAPVKTTAQSAIPDFSGMWRHGNLPWFIPPASSPGPVTNLSREQGSGVSNYSELVGDYTNPILQPWASEVVKKKGDLSKAGIVFPNPANSCWPEPM
Ga0137370_104680332	3300012285	Vadose Zone Soil	MNMQRHLLLLVTLVAAAIPASGQQVTPAAGPANIGTQNAASTPDFSGVWRHGNLPWFIPPASGPGPVTNRSRNEQGSSNYNQLVGDYTNPILQPWAADLVKKKG
Ga0137387_107109021	3300012349	Vadose Zone Soil	VAHERRVTDRKAVVREVAMNLQRHWLLLAILMAALTPTAGQQVTTTAGPANLDKQASIPDFSGIWRHGSLPWFIPPASGPGPVTNLSRRARDGVSDYNLLVGDYRNPILQPWAAEVVKKKGDLSLA
Ga0137384_108860172	3300012357	Vadose Zone Soil	MNVQRHLLLMVTLAAAVTPASGQQVAPEARPANIGAQRSASIPDFSGIWRHGNLPWFIPPASGPGPVTNLSRTKDTGVSDYSSLVGDYKNPILQ
Ga0137361_100672261	3300012362	Vadose Zone Soil	MNMQRHFLLLATVAAITLALAQQFAPTAAPANPGAQSAASIPDFSGIWRHGNLPWFIPPASGPGPVRNLSREKGTGVSDYSSLVGDYKNPILQPWAADVVKKKGELSL
Ga0150984_1171607421	3300012469	Avena Fatua Rhizosphere	MNARRHLLLLAILAMAVSPAAGQPTAAPAKTAAQSTIPDLSGIWRHGNLPWFIPPASGPGPVTNLSREQGSGVSNYSELVGDYNNPILQPWAAEVVKKKGDLSKAGIVFPNPAN
Ga0137358_105500742	3300012582	Vadose Zone Soil	MNVQWHLLLMVTLAATVIPASGQQAVPEATPANIGMQTSIPDFSGIWRHGNLPWFIPPASGPGPVTNLSRTKDTGVSDYSSLVGDYKNPILQAWAA
Ga0137398_100347344	3300012683	Vadose Zone Soil	MNMQRHFLLLATVAVVTLASAQQFAPTAAPANPGAQSAESIPDFSGIWRHGNLPWFIPPASGPGPVRNLSREKGTGVSDYSSLVGDYKNPILQPWAADVVKKKGELS
Ga0137397_112595582	3300012685	Vadose Zone Soil	MNMQRHFLLLATVGATTLASAQQFAPTAAPANPGAQSAASIPDFSGIWRHGNLPWLIPPASGPGPVRNLSREKGTGVSDYSSLVGDYRNPILQ
Ga0137395_101733674	3300012917	Vadose Zone Soil	MNMQRHFLLLATLAVITLASAKEFAPIAAPANPGAQSTASIPDFSGIWRHGNLPWFIPPASGPGPVRNLSREKGTGVSDYSS
Ga0137396_107730012	3300012918	Vadose Zone Soil	MNVQRRLLLLVTLAAAVTPASGQQFAPAATPASLGAQSAASIPDFSGIWRHGNLPWFIPPASGPGPVTNLSRTKDTGVS
Ga0137407_123532542	3300012930	Vadose Zone Soil	MNVQWHLLLMVALAATVIPASGQQAVPEATPANIGVQRSIPDFSGIWRHGNLPWFIPPASGPGPVTNLSRTTDTGVSDYSSLVGDYKNPILQAWAADVVKKKGDLSLAGVVFP
Ga0137410_114681681	3300012944	Vadose Zone Soil	VEIDMNVQRHWILLVTLATAVAATARPQVAPAATPVNLGEQSAASIPDFSGIWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDYGS
Ga0126369_132529501	3300012971	Tropical Forest Soil	MNMQRRFLLLATVVAVTFASAQQLALTAAPVNPGAQSAASIPDFSGIWRHGNLPWFIPPASGPGPVRNLSREKGTGVSDYSSLVGDYKNPILQPW
Ga0137418_101679963	3300015241	Vadose Zone Soil	MNLQKHLLLLAILAVAVSPAAGQQVTPAPTKVVSQSAIPDFSGMWRHGNLPWFIPPASGPRPVTNTSRERGTGVSNYSELVGDYTNPILQPWAADARFRRG*
Ga0137409_115844472	3300015245	Vadose Zone Soil	MNMQRHFLLLATVAAITLASAQQFAPTAAPANPGAQSAASIPDFSGIWRHGNLPWLIPPASGPGPVRNLSREKGTGVSDYSSLVGDYRNPILQPWAAD
Ga0132255_1046802682	3300015374	Arabidopsis Rhizosphere	MTMRAPVCFLLIATAIVPAAAQQPAPAPAPAKVVVPAPASAPDFSGIWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDYASLVGDYKNPILQPWAADVVKKKGDLSLAGIVF
Ga0182041_121223921	3300016294	Soil	MKVKRHLLLVATLAAAVTPASGQQAAPTGVPATIGARNAASIPDFSGIWRHGNLPWFIPPASGRGPVTNLSREKG
Ga0182040_108267822	3300016387	Soil	MNVQRHLLSLVTSAALMTLGCGPQLAPAAGPVDAATRSAASVPDFSGVWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDYGSLVGDYKNPILQPW
Ga0187785_100957601	3300017947	Tropical Peatland	MTVQPHLLLLMTLAAAVGPASGQQLEPAVGAANIGAQSVASIPDFSGIWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDY
Ga0187779_111079462	3300017959	Tropical Peatland	MSAQQCLLLVTTAAAVIPASAQQVLRTAAPASVGAQNAAPVPDFFGIWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDYGSLVGDYKNPILQPWAADVVKKKGELSLAGVTFPS
Ga0187805_101333622	3300018007	Freshwater Sediment	MSAQQYLLLVIMAAAVIPATAQRVVPTAAPANISAQNAAPVPDFSGIWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDYGSLVGDYKNPILQPWAADVVK
Ga0184619_100030881	3300018061	Groundwater Sediment	MNMQRHLLLLVTLAAAAIPASGQQMTPAAGPANIGAQNAASIPDFSGVWRHGNLPWFIPPASGPGPVTNRSRNEQGTSNYNQLVGDYTNPILQPWAAEVVKKKGELSIAG
Ga0066662_127092601	3300018468	Grasslands Soil	MNLQRHLFLLVISTAAVTPASGQQVAPATARASIGAQSTESIPDFSGIWRHGNLPWFIPPSSGPGPVTNLSREQGTGVSDY
Ga0066669_111249192	3300018482	Grasslands Soil	MNLQRHLLLLVISAAAVTPALGQQVAPAAAPATIGAQSPASRPDFSGIWRHGNLPWFIPPASGPGPVTNLSREQGTGVSDY
Ga0193751_12246251	3300019888	Soil	MNMQRRLLLLAILAAAITPASGQQVAPAPAAQSAASVPDFSGIWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDYGSLVGDYKNPILLP
Ga0210403_111907101	3300020580	Soil	MNVQRHLLLLVTLAAVVTPASGQQVAPAAAPGNIGAKSTVSIPDFSGIWRHGNLPWFIPPASGPGPVLNLSREKGTGVSDYGSLV
Ga0210386_115104841	3300021406	Soil	MNVQRHLLLLVTLAAVVTPASGQQVAPAAAPGNIGAKSAVSIPDFSGIWRHGNLPWFIPPASGPGPVLNLSREKGTGVSDYGSLV
Ga0187846_102345422	3300021476	Biofilm	MNVQRHLLLLVTLAAAVTPALGEQLVTAAAPANIGAQSSASIPDFSGIWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDYSSLVGDYKNPILQPWAADVVKKKGELSL
Ga0210402_100311116	3300021478	Soil	MNVQRHLLILVTLATGVSTASGQQVAPAAVPATVGAHGAASVPDFSGIWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDYASLVGDYKNPILQPWAADIVKKKGELSLTGITFQ
Ga0213853_111287122	3300021861	Watersheds	MNMQRHLLLLVILATGVPAASGQQVAPVAAPANLGAQSAASVPDFSGMWVHPYFPGIEPPPSGPGPVYNKSRRANGAGNNQQFVGDYTNPILKPEAAATVKRLGEISQSRVTY
Ga0257162_10252921	3300026340	Soil	MNMQRHFLLLATLAVITLASAKEFAPIAAPANPGAQSTASIPDFSGIWRHGNLPWFIPPASGPGPVRNLSREKGTGVSDYSSLVGDYRNPILQPWAADVV
Ga0257172_10092851	3300026482	Soil	MNMQRHFLLLATLAVITLASAKEFAPIAAPANPGAQSTASIPDFSGIWRHGNLPWFIPPASGPGPVRNLSREKG
Ga0257160_10387602	3300026489	Soil	MNMQRHFLLLATLAVITLASAKEFAPIAAPANPGAQSTASIPDFSGIWRHGNLPWFIPPASGPGPVRNLSREKGTGVSDYSSLVGDYRNPILQPWAADVVKKKGELSLAG
Ga0179587_105035802	3300026557	Vadose Zone Soil	MNVQWHLLLMVTLAATVIPASGQQAVPEATPANIGVQASIPDFSGIWRHGNLPWFIPPASGPGPVTNLSRTTDTGVSDYSSLVGDYRNPVLQAWAADVVK
Ga0209488_109221641	3300027903	Vadose Zone Soil	MNSQKHLLLLAILAVAVSPAAGQQVTPAPTKVVSQSAIPDFSGMWRHGNLPWFIPPASGPGPVTNTSRERGTGVSNYSELVGDYTNPILQPWAAEVVKKKGDLSKAGVVFPNPANSCWP
Ga0307302_102292961	3300028814	Soil	MNVQRHLLLMVTLAATVIPASGQQGVPEATPANIGVQSSSSTPDFSGIWRHGNLPWFIPPASGPGPVTNLSRTKETGVSDYSSLVGDYKNPILQAWAADVVKKKGDLS
Ga0308309_113585451	3300028906	Soil	MNVHRNLLVLVTLAAASPASGQQAELAAGQTNIGQQSAASIPDFSGIWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDYGSLVGDYRNPILQPWAADVVKKKGELSLSG
Ga0307497_107802862	3300031226	Soil	MNVQRHLLILVTLATGVSTASGQQVAPAAVPATVGAHGAASVPDFSGIWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDYASLVGDY
Ga0318538_103309622	3300031546	Soil	MNVQRHLLILVTLATGVGTAWGQQATPAAAPSTVGVHGAASVPDFSGIWRHGNLPWFIPPASGPGPVTNLSREKGTG
Ga0318528_103685431	3300031561	Soil	MNVQRHLLSLVTSAALMTFVCGPRLGPAAAPVDAVALKAVLSIPDFSGVWRHGNLPWFIPPASGPGPVTNLSREKGSGVSDYGSLVGDYKNPILQPRAAEVVK
Ga0310686_1159837522	3300031708	Soil	VNVQRHLLLLVTLAAAVTTASGQQSPPAVAPAHFSAQSAASIPDFSGIWRHGNLPWFIPPASGPGPVTNLSREKGSGVSDYSSLVGDYRNPILQPWAAEVVKQHGDLSLAGVTFPNPANTCW
Ga0318501_104210811	3300031736	Soil	MNVQRHLLSLVTSAALMTFACGPHVGPAAAPVDAAARSAESVPDFSGVWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDYGSL
Ga0307468_1005486592	3300031740	Hardwood Forest Soil	MSAQQYLLLVTMVAAIIPASAQQVIPTAAPANIGVQNAAPVPDFSGIWRHGNLPWFIPPASGPGPVTNLSREKGTGVS
Ga0318521_103147661	3300031770	Soil	MNVQRHLLSLVTSAALMTFACGPHVGPAAAPVDAAARSAESVPDFSGVWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDYGSLVGDY
Ga0318546_110026131	3300031771	Soil	MNVQRHLLILVTLATGVGTAWGQQATPAAAPSTVGVHGAASVPDFSGIWRHGNLPWLIPPASGPGPVTNLSREKGTGVSDYASLVGDYKNPILQPWAADVVKKKGELSL
Ga0318547_107213572	3300031781	Soil	MNVQRHLLSLVTSAALMTFACGPHVGPAAAPVDAAARSAESVPDFSGVWRHGNLPWFIPPASGPGPVTNLSREKGTGVSD
Ga0318529_103058321	3300031792	Soil	MNVQRHLLSLVTSAALMTFVCGPRLGPAAAPVDAVALKAVLSIPDFSGVWRHGNLPWFIPPASGPGPVTNLSREKGSGVSDYGSLVGDYKNPILQPWAAEVVK
Ga0318568_104724081	3300031819	Soil	MNVQRHLLILVTLATGVGTAWGQQATPAAAPSTVGVHGAASVPDFSGIWRHGNLPWLIPPASGPGPVTNLSREKGTGVSDYASLVGDYKNPILQ
Ga0307478_117568891	3300031823	Hardwood Forest Soil	MNPQPHLLLLAALAAPVILASLQPLPAAPTNVAAQSAESIPDFSGVWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDYG
Ga0318517_103270462	3300031835	Soil	MNVQRHLLSLVTSAALMTLGCGPQLAPAAAPVDAATRSAASVSDFSGVWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDYGSLVGDYKNPILQP
Ga0306923_100559541	3300031910	Soil	MNVQRHLLILVTLATGVGTAWGQQATPAAAPSTVGVHGAASVPDFSGIWRHGNLPWLIPPASGPGPVTNLSREKGTGVSDYASLVGDYKNPILQPWAADVVK
Ga0310916_105339571	3300031942	Soil	MKLQRHLVLLATLAAAITPAWGQQFTTAAAPANLGAQNAASVPDFSGLWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDYNSLVGDYKNPILQPWAADVVKKKGELSLAGVTFP
Ga0310913_108287421	3300031945	Soil	MNVQRHLLILVTLATGVGTAWGQQATPAAAPSTVGVHGAASVPDFSGIWRHGNLPWLIPPASGPGPVTNLSREKGTGVSDYASLVGDYKNPILQPWAADVVKKKGELSLAGITFQSPSNTCW
Ga0310910_102850182	3300031946	Soil	MNVQRHLLILVTLATGVGTAWGQQATPAAAPSTVGVHGAASVPDFSGIWRHGNLPWLIPPASGPGPVTNLSREKGTGVSDYASLVGDYKNPILQPWAADVVKKKGELSLAGITF
Ga0310910_105149531	3300031946	Soil	MSAQQYLLLMTMAAAVIPASAQRVVPIAATANIRAQNAAPVPDFSGIWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDYGSLVGDYKNPI
Ga0310909_101419211	3300031947	Soil	MNVQRHLLILVTLATGVGTAWGQQATPAAAPSTVAAHGAASVPDFSGIWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDYASL
Ga0306922_111162742	3300032001	Soil	MSAQQYLLLMTMAAAVIPASAQRVVPIAATANIRAQNAAPVPDFSGIWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDYGSLVG
Ga0310911_102571101	3300032035	Soil	MNVQRHLLSLVTSAALMTFACGPHVGPAAAPVDAAARSAESVPDFSGVWRHGNLPWFIPPASGPGPVTNLSREKGTGVS
Ga0318558_106820381	3300032044	Soil	MNVQRHLLSLVTSAALMTFVCGPRLGPAAAPVDAVALKAVLSIPDFSGVWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDYGSLV
Ga0318533_111465351	3300032059	Soil	MNMQRHFLLLATVAALTVASAQQFAPTAAPANPGAQNAASIPDFSGIWRHGNLPWFIPPASGPGPVRNLSREKGTGVSDYS
Ga0318577_106234511	3300032091	Soil	MNVQRHLLSLVTSAALMTFACGPHVGPAAAPVDAAARSAESVPDFSGVWRHGNLPWFIPPASGPGPVTNLSREKGSGVSDYGSLVGDYKNPILQPWAAEVVKRKGELSLAGVTFPNPANRCW
Ga0306920_1014102742	3300032261	Soil	MNVQRHLLSLVTSAALMTFACGPHVGPAAAPVDAAARSAESVPDFSGVWRHGNLPWFIPPASGPGPVTNLSREKGSGVSDYGSLVGDYKNPILQPWAAEVVKRKGELS
Ga0335081_106359201	3300032892	Soil	MNVQRHLLILVTLAMGVTAASGQPVGPAAAPVTVGARSAASVPDFSGIWRHGNLPWFIPPASGPGPVTNLSREKGTGVSDYASLVGDYKNPILQPWAADVVKKKGELS
Ga0372943_1160209_3_314	3300034268	Soil	MDMNVQKHLLLLAMMAVAVGPAAGQVTPAAAPVKATAQSTIPDFSGMWRHGNLPWFIPPAAGPGPVTNLSREKDTGVSDYNQLVGDFNNPILQPWAAEVVRKKG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081089

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences