Metagenome Family F081111

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081111
Family Type	Metagenome
Number of Sequences	114
Average Sequence Length	50 residues
Representative Sequence	LTESQVSFVCNCGEEIVMEVKAEEEYNVACPKCGQEYRFFGQSVLRWKSE
Number of Associated Samples	82
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	41.23 %
% of genes near scaffold ends (potentially truncated)	50.00 %
% of genes from short scaffolds (< 2000 bps)	72.81 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (85.088 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (31.579 % of family members)
Environment Ontology (ENVO)	Unclassified (54.386 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.526 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 56.00% Coil/Unstructured: 44.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF16198	TruB_C_2	24.56
PF02163	Peptidase_M50	18.42
PF01472	PUA	14.91
PF01509	TruB_N	3.51
PF13189	Cytidylate_kin2	2.63
PF00572	Ribosomal_L13	1.75
PF10559	Plug_translocon	0.88
PF00416	Ribosomal_S13	0.88
PF01428	zf-AN1	0.88
PF01000	RNA_pol_A_bac	0.88
PF01738	DLH	0.88
PF08068	DKCLD	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0130	tRNA U55 pseudouridine synthase TruB, may also work on U342 of tmRNA	Translation, ribosomal structure and biogenesis [J]	4.39
COG0102	Ribosomal protein L13	Translation, ribosomal structure and biogenesis [J]	1.75
COG0099	Ribosomal protein S13	Translation, ribosomal structure and biogenesis [J]	0.88
COG0202	DNA-directed RNA polymerase, alpha subunit/40 kD subunit	Transcription [K]	0.88
COG3582	CDC48-associated ubiquitin-like protein CUZ1, contains AN1-type Zn-finger (protection from As/Sb toxicity)	Defense mechanisms [V]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.09 %
Unclassified	root	N/A	14.91 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.09 %
Unclassified	root	N/A	14.91 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	85.09 %
Unclassified	root	N/A	14.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.91 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	10.53 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.91 %
Crenarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota	7.02 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	3.51 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.91 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	3.51 %
Thermoprotei	class	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei	2.63 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.91 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	3.51 %
Desulfurococcales	order	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales	2.63 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.91 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	3.51 %
Desulfurococcaceae	family	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales → Desulfurococcaceae	0.88 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002557\|JGI25381J37097_1004923	All Organisms → cellular organisms → Archaea	2334	Open in IMG/M
3300002558\|JGI25385J37094_10007533	All Organisms → cellular organisms → Archaea	3861	Open in IMG/M
3300002558\|JGI25385J37094_10135998	All Organisms → cellular organisms → Archaea	675	Open in IMG/M
3300002558\|JGI25385J37094_10164049	All Organisms → cellular organisms → Archaea	595	Open in IMG/M
3300002561\|JGI25384J37096_10026900	All Organisms → cellular organisms → Archaea	2243	Open in IMG/M
3300002914\|JGI25617J43924_10141797	All Organisms → cellular organisms → Archaea	832	Open in IMG/M
3300002915\|JGI25387J43893_1027055	All Organisms → cellular organisms → Archaea	783	Open in IMG/M
3300005167\|Ga0066672_10103849	All Organisms → cellular organisms → Archaea	1737	Open in IMG/M
3300005167\|Ga0066672_10504701	Not Available	785	Open in IMG/M
3300005171\|Ga0066677_10581611	All Organisms → cellular organisms → Archaea → Euryarchaeota	637	Open in IMG/M
3300005174\|Ga0066680_10099834	All Organisms → cellular organisms → Archaea	1775	Open in IMG/M
3300005174\|Ga0066680_10751779	All Organisms → cellular organisms → Archaea	592	Open in IMG/M
3300005176\|Ga0066679_10029671	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota	2998	Open in IMG/M
3300005176\|Ga0066679_10861707	All Organisms → cellular organisms → Archaea	573	Open in IMG/M
3300005177\|Ga0066690_10751802	Not Available	639	Open in IMG/M
3300005178\|Ga0066688_10920812	All Organisms → cellular organisms → Archaea	538	Open in IMG/M
3300005180\|Ga0066685_10057636	All Organisms → cellular organisms → Archaea	2512	Open in IMG/M
3300005180\|Ga0066685_10316571	All Organisms → cellular organisms → Archaea	1081	Open in IMG/M
3300005181\|Ga0066678_10632195	All Organisms → cellular organisms → Archaea	712	Open in IMG/M
3300005445\|Ga0070708_100462845	All Organisms → cellular organisms → Archaea	1196	Open in IMG/M
3300005445\|Ga0070708_102271348	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	500	Open in IMG/M
3300005446\|Ga0066686_10592408	Not Available	753	Open in IMG/M
3300005450\|Ga0066682_10017020	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales → Desulfurococcaceae	4024	Open in IMG/M
3300005468\|Ga0070707_100748658	All Organisms → cellular organisms → Archaea	940	Open in IMG/M
3300005553\|Ga0066695_10141998	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota	1492	Open in IMG/M
3300005554\|Ga0066661_10287358	Not Available	1014	Open in IMG/M
3300005558\|Ga0066698_10069958	All Organisms → cellular organisms → Archaea	2262	Open in IMG/M
3300005559\|Ga0066700_10531902	All Organisms → cellular organisms → Archaea	820	Open in IMG/M
3300005568\|Ga0066703_10015752	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota	3788	Open in IMG/M
3300005568\|Ga0066703_10109335	All Organisms → cellular organisms → Archaea	1633	Open in IMG/M
3300005574\|Ga0066694_10035867	All Organisms → cellular organisms → Archaea	2228	Open in IMG/M
3300005764\|Ga0066903_109125166	All Organisms → cellular organisms → Archaea	501	Open in IMG/M
3300006797\|Ga0066659_10032781	All Organisms → cellular organisms → Archaea	3127	Open in IMG/M
3300006797\|Ga0066659_10643877	All Organisms → cellular organisms → Archaea	863	Open in IMG/M
3300006797\|Ga0066659_10957601	Not Available	715	Open in IMG/M
3300006797\|Ga0066659_11349905	All Organisms → cellular organisms → Archaea	595	Open in IMG/M
3300007255\|Ga0099791_10447240	All Organisms → cellular organisms → Archaea	625	Open in IMG/M
3300007258\|Ga0099793_10366615	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	705	Open in IMG/M
3300007258\|Ga0099793_10720875	All Organisms → cellular organisms → Archaea	503	Open in IMG/M
3300009012\|Ga0066710_100001509	All Organisms → cellular organisms → Archaea	17491	Open in IMG/M
3300009012\|Ga0066710_102199048	Not Available	806	Open in IMG/M
3300009038\|Ga0099829_10703241	All Organisms → cellular organisms → Archaea	840	Open in IMG/M
3300009089\|Ga0099828_12032851	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	502	Open in IMG/M
3300009137\|Ga0066709_100722676	All Organisms → cellular organisms → Archaea	1435	Open in IMG/M
3300009137\|Ga0066709_103307049	All Organisms → cellular organisms → Archaea	586	Open in IMG/M
3300010304\|Ga0134088_10079337	All Organisms → cellular organisms → Archaea	1532	Open in IMG/M
3300010304\|Ga0134088_10129115	All Organisms → cellular organisms → Archaea	1198	Open in IMG/M
3300010335\|Ga0134063_10026681	All Organisms → cellular organisms → Archaea	2428	Open in IMG/M
3300011269\|Ga0137392_10232837	All Organisms → cellular organisms → Archaea	1513	Open in IMG/M
3300011269\|Ga0137392_10724919	All Organisms → cellular organisms → Archaea	823	Open in IMG/M
3300011271\|Ga0137393_10206702	Not Available	1658	Open in IMG/M
3300011271\|Ga0137393_10549241	All Organisms → cellular organisms → Archaea	991	Open in IMG/M
3300012096\|Ga0137389_10537040	All Organisms → cellular organisms → Archaea	1004	Open in IMG/M
3300012096\|Ga0137389_10885415	All Organisms → cellular organisms → Archaea	766	Open in IMG/M
3300012199\|Ga0137383_10122717	All Organisms → cellular organisms → Archaea	1896	Open in IMG/M
3300012201\|Ga0137365_10008233	All Organisms → cellular organisms → Archaea	8318	Open in IMG/M
3300012202\|Ga0137363_10104242	All Organisms → cellular organisms → Archaea	2161	Open in IMG/M
3300012202\|Ga0137363_11573870	All Organisms → cellular organisms → Archaea	549	Open in IMG/M
3300012207\|Ga0137381_10014015	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales	6219	Open in IMG/M
3300012208\|Ga0137376_10232603	All Organisms → cellular organisms → Archaea	1597	Open in IMG/M
3300012209\|Ga0137379_10436998	All Organisms → cellular organisms → Archaea	1217	Open in IMG/M
3300012209\|Ga0137379_10653587	Not Available	957	Open in IMG/M
3300012209\|Ga0137379_10962106	All Organisms → cellular organisms → Archaea	759	Open in IMG/M
3300012210\|Ga0137378_11228169	All Organisms → cellular organisms → Archaea	665	Open in IMG/M
3300012211\|Ga0137377_11275810	All Organisms → cellular organisms → Archaea	665	Open in IMG/M
3300012357\|Ga0137384_10687725	All Organisms → cellular organisms → Archaea	831	Open in IMG/M
3300012359\|Ga0137385_11252780	All Organisms → cellular organisms → Archaea	604	Open in IMG/M
3300012362\|Ga0137361_10441951	All Organisms → cellular organisms → Archaea	1195	Open in IMG/M
3300012925\|Ga0137419_10010375	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Desulfurococcales	5013	Open in IMG/M
3300012927\|Ga0137416_11468906	All Organisms → cellular organisms → Archaea	619	Open in IMG/M
3300012944\|Ga0137410_10561086	All Organisms → cellular organisms → Archaea	940	Open in IMG/M
3300014154\|Ga0134075_10101989	All Organisms → cellular organisms → Archaea	1212	Open in IMG/M
3300014154\|Ga0134075_10111050	Not Available	1162	Open in IMG/M
3300017656\|Ga0134112_10341499	Not Available	609	Open in IMG/M
3300017659\|Ga0134083_10025327	All Organisms → cellular organisms → Archaea	2128	Open in IMG/M
3300017934\|Ga0187803_10110727	Not Available	1079	Open in IMG/M
3300018431\|Ga0066655_10037613	All Organisms → cellular organisms → Archaea	2413	Open in IMG/M
3300018468\|Ga0066662_10062217	All Organisms → cellular organisms → Archaea	2449	Open in IMG/M
3300018468\|Ga0066662_10884553	Not Available	875	Open in IMG/M
3300018468\|Ga0066662_12081393	All Organisms → cellular organisms → Archaea	595	Open in IMG/M
3300018482\|Ga0066669_10000513	All Organisms → cellular organisms → Archaea	12634	Open in IMG/M
3300021046\|Ga0215015_10333325	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	716	Open in IMG/M
3300021046\|Ga0215015_10576739	All Organisms → cellular organisms → Archaea	1543	Open in IMG/M
3300021046\|Ga0215015_11042010	All Organisms → cellular organisms → Archaea	1678	Open in IMG/M
3300021404\|Ga0210389_11395234	All Organisms → cellular organisms → Archaea	535	Open in IMG/M
3300025922\|Ga0207646_10000001	All Organisms → cellular organisms → Archaea	1242027	Open in IMG/M
3300026277\|Ga0209350_1003021	All Organisms → cellular organisms → Archaea	6335	Open in IMG/M
3300026295\|Ga0209234_1145225	Not Available	847	Open in IMG/M
3300026296\|Ga0209235_1003467	All Organisms → cellular organisms → Archaea	8798	Open in IMG/M
3300026297\|Ga0209237_1159133	Not Available	850	Open in IMG/M
3300026309\|Ga0209055_1001308	All Organisms → cellular organisms → Archaea	16595	Open in IMG/M
3300026309\|Ga0209055_1094514	Not Available	1209	Open in IMG/M
3300026309\|Ga0209055_1212176	All Organisms → cellular organisms → Archaea	592	Open in IMG/M
3300026310\|Ga0209239_1084232	Not Available	1369	Open in IMG/M
3300026325\|Ga0209152_10023251	All Organisms → cellular organisms → Archaea	2120	Open in IMG/M
3300026331\|Ga0209267_1273381	All Organisms → cellular organisms → Archaea	571	Open in IMG/M
3300026332\|Ga0209803_1110118	All Organisms → cellular organisms → Archaea	1115	Open in IMG/M
3300026333\|Ga0209158_1029389	All Organisms → cellular organisms → Archaea	2392	Open in IMG/M
3300026480\|Ga0257177_1014797	All Organisms → cellular organisms → Archaea	1066	Open in IMG/M
3300026527\|Ga0209059_1025623	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota	2675	Open in IMG/M
3300026529\|Ga0209806_1156434	All Organisms → cellular organisms → Archaea	862	Open in IMG/M
3300026540\|Ga0209376_1129480	Not Available	1240	Open in IMG/M
3300027643\|Ga0209076_1027384	All Organisms → cellular organisms → Archaea	1575	Open in IMG/M
3300027846\|Ga0209180_10076739	All Organisms → cellular organisms → Archaea	1882	Open in IMG/M
3300027846\|Ga0209180_10399337	All Organisms → cellular organisms → Archaea	779	Open in IMG/M
3300027846\|Ga0209180_10666045	All Organisms → cellular organisms → Archaea	569	Open in IMG/M
3300027862\|Ga0209701_10197774	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota	1200	Open in IMG/M
3300027875\|Ga0209283_10613294	All Organisms → cellular organisms → Archaea	688	Open in IMG/M
3300027875\|Ga0209283_10980937	All Organisms → cellular organisms → Archaea	505	Open in IMG/M
3300027882\|Ga0209590_10010705	All Organisms → cellular organisms → Archaea	4281	Open in IMG/M
3300031753\|Ga0307477_10007274	All Organisms → cellular organisms → Archaea	7744	Open in IMG/M
3300031962\|Ga0307479_10077502	All Organisms → cellular organisms → Archaea	3216	Open in IMG/M
3300032180\|Ga0307471_100057344	All Organisms → cellular organisms → Archaea	3260	Open in IMG/M
3300032180\|Ga0307471_103363870	All Organisms → cellular organisms → Archaea	566	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.12%
Aquatic	Environmental → Aquatic	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.12%
Freshwater	Environmental → Aquatic → Freshwater	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	93.86%
Loam	Environmental → Terrestrial → Soil → Loam	5.26%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.88%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	48.25%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.35%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.51%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.88%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.88%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	31.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	29.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	18.42%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.14%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.51%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.75%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.88%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002915	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026480	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25381J37097_10049234	3300002557	Grasslands Soil	MTENQVSFVCNCGEEIVMEVRAEEEYNVACSKCGQEYRFFGQSVLRWKSE*
JGI25385J37094_100075332	3300002558	Grasslands Soil	VTESQVSFVCNCGEEIVMDVRAEEEYNVACPKCGQEYRFFGQSVLRWKSE*
JGI25385J37094_101359982	3300002558	Grasslands Soil	LTESQVSFVCNCGEEILMEVKSDEEYNVVCAKCGQEYRFFGQTVLRWKSE*
JGI25385J37094_101640492	3300002558	Grasslands Soil	MTESQVSFVCNCGEEIVMEVKAEEEYNIACPKCGQEYRFFGQSVLRWKSE*
JGI25384J37096_100269001	3300002561	Grasslands Soil	LRFQLKVESFLTESQVSFVCNCGEEIVIEVKSDEEYNVVCAKCGQEYRFFGQSVLRWKSE
JGI25617J43924_101417972	3300002914	Grasslands Soil	LTESQVSFVCNCGEEILMEVKSDEEYNVVCAKCGQEYRFFGHTVLRWKSE*
JGI25387J43893_10270551	3300002915	Grasslands Soil	DFSMTENQVSFVCNCGEEIVMEVRAEEEYNVACSKCGQEYRFFGQSVLRWKSE*
Ga0066672_101038492	3300005167	Soil	VTESQVSFVCNCGEEILMEVKAEEEYNVACPKCGQEYRFFGQSVLRWKSE*
Ga0066672_105047012	3300005167	Soil	MTENQVSFVCNCGEEIVMEVKAEEEYNVACSKCGQEYRFFGQSVLRWK
Ga0066677_105816112	3300005171	Soil	VTESQVSFVCNCGEEIVMEVKAEEEYNVACPKCGQEYRFFGQSVLRWKSE*
Ga0066680_100998344	3300005174	Soil	LTESQVSFVCNCGEEILMEVKSDEEYNVVCAKCGQEYRFFGQSVLRWKSG*
Ga0066680_107517792	3300005174	Soil	MTENQVSFVCNCGEEIVMEVKAEEEYNVACSKCGQEYRFFGQSVLRWKSE*
Ga0066679_100296712	3300005176	Soil	LKVDSSLTEGQVSFVCNCGEEIVMAVSAEEEYNVACPKCGQEYRFFGQSVLRWKSE*
Ga0066679_108617072	3300005176	Soil	MTENQVSFVCNCGEEIVMEVKAEEEYNVACPKCGQEYRFFGQSVLRWKSE*
Ga0066690_107518022	3300005177	Soil	MTENQVSFVCNCGEEIVMEVKAEEEYNVACSKCGQEYRFFGQSVLRWKS
Ga0066688_109208121	3300005178	Soil	ESQVSFVCNCGEEILMEVRAEEEYNVACPKCGQEYRFFGQSVLRWKSE*
Ga0066685_100576363	3300005180	Soil	LALTESQVSFVCNCGEEILMEVKSDEEYNVVCAKCGQEYRFFGQSVLRWKSE*
Ga0066685_103165711	3300005180	Soil	VYGKRRPSQSKLRVDFSMTENQVSFVCNCGEEIVMEVRAEEEYNVACSKCGQEYRFFGQSVLRWKSE*
Ga0066678_106321951	3300005181	Soil	LVTESQVSFVCNCGEEILMEVKAEEEYNVACPKCGQEYRFFGQSVLRWKSE*
Ga0070708_1004628452	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LTESQVSFVCNCGEEILIEVKSDEEYNVVCAKCGQEYRFFGQTVLRWKSE*
Ga0070708_1022713481	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LTESQVSFVCNCGEEILMEVKSDEEYNVVCAKCGQEYRFFGQSVLRWKSE*
Ga0066686_105924082	3300005446	Soil	VTESQVSFICNCGEEILMEVRAEEEYNIACPKCGQEYRFFG
Ga0066682_100170202	3300005450	Soil	MTENQVSFVCNCGEEIVMEVKAEEEYNVACSKCGQEYRFFGQSVLRWKSD*
Ga0070707_1007486582	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LTENQVSFVCNCGEEILMEVKSDEEYNVVCAKCGQEYRFFGQSVLRWKSE*
Ga0066695_101419982	3300005553	Soil	LRFRLKVESFLTESQVSFVCNCGEEIVMEVIPEMEYNIACPKCAQEYRFFGQSVLRAKSD
Ga0066661_102873582	3300005554	Soil	MTENQVSFVCNCGEEIVMEVKAEEEYNVACPKCGQEYR
Ga0066698_100699582	3300005558	Soil	LALTESQVSFVCNCGEEILMEVRSDEEYNVVCAKCGQEYRFFGQSVLRWKSE*
Ga0066700_105319021	3300005559	Soil	SLVTESQVSFVCNCGEEILMEVRAEEEYNVACPKCGQEYRFFGQSVLRWKSE*
Ga0066703_100157523	3300005568	Soil	LKVDSSLTDGQVSFVCNCGEEIVMAVSAEEEYNVACPKCGQEYRFFGQSVLRWKSE*
Ga0066703_101093351	3300005568	Soil	LTESQVSFVCNCGEEIVMEVKAEEEYNVACPKCGQEYRF
Ga0066694_100358671	3300005574	Soil	SRLRVDPLVTESQVSFVCNCGEEIVMEVRAEEEYNVACPKCGQEYRFFGQSVLRWKSE*
Ga0066903_1091251662	3300005764	Tropical Forest Soil	LTISLEKEISFMCNCGEEIKMMVDPETEYEVKCPKCGQEYRFSGASVLRWQSAS*
Ga0066659_100327813	3300006797	Soil	LTESQVSFVCNCGEEIVMEVKAEEEYNVACPKCGQEYRFFGQSVLRWKSE*
Ga0066659_106438771	3300006797	Soil	VTFVCNCGDEITVEVNPNQENEVVCSKCGQEYRFFGQSVLRFKSNSDGR*
Ga0066659_109576012	3300006797	Soil	VTKSQVSFVCNCGEEIVMDVRAEEEYNVACPKCGQEYRFFGQS
Ga0066659_113499051	3300006797	Soil	ESQVSFVCNCGEEIVMEVKAEEEYNVACPKCGQEYRFFGQSVLRWKSE*
Ga0099791_104472402	3300007255	Vadose Zone Soil	VSFVCNCGEEILMEVKPDEEYNVVCAKCGQEYRFFGQSVLRWKSE*
Ga0099793_103666152	3300007258	Vadose Zone Soil	LTESQVSFVCNCGEEILMEVKSDEEYNVVCAKCGQEYRFFGQTVLRWKSEQLG*
Ga0099793_107208752	3300007258	Vadose Zone Soil	LTESQVSFVCNCGEEILMEVKSDEEYNVVCAKCGQEYRFFGQSVLRWKSEQLS*
Ga0066710_10000150913	3300009012	Grasslands Soil	VSESQVSFFCNCGEEIVMEVKAEEEYNVACPKCGQEYRFFGQSVLRWKSE
Ga0066710_1021990482	3300009012	Grasslands Soil	LRFRLKVESFLTESQVSFVCNCGEEIVMEVKPEMEYNIACPKCAQEYR
Ga0099829_107032411	3300009038	Vadose Zone Soil	GEEILMEVKSDEEYNVVCAKCGQEYRFFGQSVLRWKSE*
Ga0099828_120328511	3300009089	Vadose Zone Soil	LTESQISFVCNCGEEILIEVKSDKEYNVVCAKCGQEYRFFGQSVLRWKSE*
Ga0066709_1007226761	3300009137	Grasslands Soil	CNCGEEIVMEVKAEEEYNVACPKCGQEYRFFGQSVLRWRSE*
Ga0066709_1033070492	3300009137	Grasslands Soil	LVTESQVSFVCNCGEEILMEVRAEEEYNVACPKCGQEYRFFGQSVLRWKSE*
Ga0134088_100793372	3300010304	Grasslands Soil	SRSRLGVDSLVSESQVSFFCNCGEEIVMEVKAEEEYNVACPKCGQEYRFFGQSVLRWRSE
Ga0134088_101291152	3300010304	Grasslands Soil	ALTESQVSFVCNCGEEILMEVKSDEEYNVVCAKCGQEYRFFGQSVLRWKSE*
Ga0134063_100266815	3300010335	Grasslands Soil	VSESQVSFFCNCGEEIVMEVKAEEEYNVACPKCGQEY
Ga0137392_102328371	3300011269	Vadose Zone Soil	ILMEVKSDEEYNVVCAKCGQEYRFFGHTVLRWKSE*
Ga0137392_107249191	3300011269	Vadose Zone Soil	LTESQVSFVCNCGEEILMEVKSDEEYNVVCAKCGQEYRFFGHTVLRW
Ga0137393_102067023	3300011271	Vadose Zone Soil	VTETQVSFVCNCGEEIVMEVKAEEEYNVACPKCAQEYRFFGQSVLRWKAE*
Ga0137393_105492411	3300011271	Vadose Zone Soil	TENQVSFVCNCGEEILMEVKSDEEYNVVCAKCGQEYRFFGHTVLRWKSE*
Ga0137389_105370401	3300012096	Vadose Zone Soil	EEILMEVKSDEEYNVVCAKCGQEYRFFGHTVLRWKSE*
Ga0137389_108854152	3300012096	Vadose Zone Soil	FQLKVESFLTESQVSFVCNCGEEIVIEVKSDEEYNVVCAKCGQEYRFFGQSVLRWKSE*
Ga0137383_101227171	3300012199	Vadose Zone Soil	RPIRACGKRRLSQFRLRVDFSMTENQVSFVCNCGEEIVMEVRAEEEYNIACPKCGQEYRFFGQSVLRWKSE*
Ga0137365_1000823312	3300012201	Vadose Zone Soil	MTENQVSFVCNCGEEIVMEVRAEEEYNIACPKCGQEYRFFGQSVLRWKSE*
Ga0137363_101042422	3300012202	Vadose Zone Soil	LTESQVSFVCNCGEEILMEVKSDEEYNVVCAKCGQEYRFFGQSVLRWNTE*
Ga0137363_115738701	3300012202	Vadose Zone Soil	CNCGEEILMEVKSDEEYNVVCAKCGQEYRFFGQTVLRWKSE*
Ga0137381_100140155	3300012207	Vadose Zone Soil	MTENQVSFVCNCGEEIVMGVRAEEEYNIACPKCGQEYRFFGQSVLRWKSE*
Ga0137376_102326033	3300012208	Vadose Zone Soil	MTENQVSFVCNCGEEIVMEVRAEEEYNIACPKCGQEYRFFGQSVLR
Ga0137379_104369983	3300012209	Vadose Zone Soil	GEEIVMEVRAEEEYNIGCPKCGQEYRFFGQSVLRWKSE*
Ga0137379_106535872	3300012209	Vadose Zone Soil	MTESQVSFVCNCGEEIVMEVRAEEEYNVACPKCGQEYRFYG
Ga0137379_109621062	3300012209	Vadose Zone Soil	VCNCGEEIVMEVRAEEEYNVACPKCGQEYRFFGQSVLRWKSE*
Ga0137378_112281692	3300012210	Vadose Zone Soil	IRACGKRRLSQFRLRVDFSMTENQVSFVCNCGEEIVMEVRAEEEYNIGCPKCGQEYRFFGQSVLRWKSE*
Ga0137377_112758102	3300012211	Vadose Zone Soil	CNCGEEIVMDVRAEEEYNVACPKCGQEYRFFGQSVLRWKSE*
Ga0137384_106877252	3300012357	Vadose Zone Soil	FRLRVDFSMTENQVSFVCNCGEEIVMEVRAEEEYNIGCPKCGQEYRFFGQSVLRWKSE*
Ga0137385_112527801	3300012359	Vadose Zone Soil	LVTESQVSFVCNCGEEIVMEVRAEEEYNVACPKCGQEYRFFGQSVLRWKSE*
Ga0137361_104419512	3300012362	Vadose Zone Soil	MTESQVSFVCNCGEEIVMEVKAEEEYNIACPKCGQEYRFFGQSV*
Ga0137419_100103756	3300012925	Vadose Zone Soil	LTRPLTESQVSFVCNCGEEILMEVKSDEEYNVVCAKCGQEYRFFGQSVLRWKSEQLS*
Ga0137416_114689061	3300012927	Vadose Zone Soil	SALTESQVSFVCNCGEEILMEVKSDEEYNVVCAKCGQEYRFFGQSVLRWKSE*
Ga0137410_105610861	3300012944	Vadose Zone Soil	LMEVKSDEEYNVVCAKCGQEYRFFGQTVLRWKSEQLG*
Ga0134075_101019892	3300014154	Grasslands Soil	SFICNCGEEIVMDVRAEEEYNVACPKCGQEYRFFGQSVLRWKSE*
Ga0134075_101110501	3300014154	Grasslands Soil	VTESQVSFICNCGEEILMEVRAEEEYNIACPKCGQEYR
Ga0134112_103414992	3300017656	Grasslands Soil	MTENQVSFLCNCGEEIVMEVKAEEEYNVACSKCGQ
Ga0134083_100253272	3300017659	Grasslands Soil	VSESQVSFFCNCGEEIVMEVKAEEEYNVACPKCGQEYRFFGQSVLRWKPE
Ga0187803_101107272	3300017934	Freshwater Sediment	MTESQVSFFCNCGEEIVMDVKADEEYNVTCPKCGQEYRFFGHTVLRWKS
Ga0066655_100376132	3300018431	Grasslands Soil	MTENQVSFVCNCGEEIVMEVKAEEEYNVACSKCGQEYRFFGQSVLSWKSD
Ga0066662_100622174	3300018468	Grasslands Soil	MTESQVSFVCNCGEEIVMEVKAEEEYNIACPKCGQEYRFFGQSVLRWKSE
Ga0066662_108845532	3300018468	Grasslands Soil	MTENQVSFVCNCGEEIVMEVKAEEEYNVACSKCGQEYRFFGQSVLRWKSE
Ga0066662_120813932	3300018468	Grasslands Soil	RVDPLVTESQVSFVCNCGEEIVMDVRAEEEYNVACPKCGQEYRFFGQSVLRWKSE
Ga0066669_1000051316	3300018482	Grasslands Soil	MTENQVSFVCNCGEEIVMEVKAEEEYNVACSKCGQEYRFFGQSVLRWKSD
Ga0215015_103333252	3300021046	Soil	LRLRVDSLPLTESQVSFVCNCGEEILMNVKPDEEYNVVCPKCGQEYRFFGHTVLRWKSE
Ga0215015_105767392	3300021046	Soil	LTESQVSFVCNCGEEILMEVKSDEEYNVACAKCGQEYRFFGQSVLRWKTEQL
Ga0215015_110420102	3300021046	Soil	LSERQVSFVCNCGEEILMEVKPDEEYNVVCPKCGQEYRFFGQSVLRWKTQ
Ga0210389_113952341	3300021404	Soil	HIHASGKQRPSRFQPKADSALSESQVSFVCNCGEEILMEVKPDEEYNVVCHKCAQEYRFFGSSVLRWKTQ
Ga0207646_10000001700	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LRLRVDSFLSESQVSFVCNCGEEILMNVKPDEEYNVACQKCGQEYRFFGHTVLRWKLQ
Ga0209350_10030215	3300026277	Grasslands Soil	LRFRLKVESFLTESQVSFVCNCGEEIVMEVKPEMEYNIACPKCAQEYRFFGQSVLRAKSD
Ga0209234_11452252	3300026295	Grasslands Soil	MTENQVSFVCNCGEEIVMEVRAEEEYNVACSKCGQEYRFFGQSVLRWKSE
Ga0209235_10034679	3300026296	Grasslands Soil	LTESQVSFVCNCGEEILMEVKSDEEYNVVCAKCGQEYRFFGQTVLRWKSE
Ga0209237_11591331	3300026297	Grasslands Soil	VTESQVSFVCNCGEEIVMDVRAEEEYNVACPKCGQEYRFFGQ
Ga0209055_100130814	3300026309	Soil	LKVDSSLTDGQVSFVCNCGEEIVMAVSAEEEYNVACPKCGQEYRFFGQSVLRWKSE
Ga0209055_10945143	3300026309	Soil	MTENQVSFVCNCGEEIVMEVKAEEEYNVACPKCGQEYRFFGQSVLRWKSE
Ga0209055_12121761	3300026309	Soil	FSMTENQVSFVCNCGEEIVMEVKAEEEYNVACSKCGQEYRFFGQSVLRWKSD
Ga0209239_10842323	3300026310	Grasslands Soil	LALTESQVSFVCNCGEEILMEVKSDEEYNVVCAKCGQEYRFFGQSVLRWKSE
Ga0209152_100232512	3300026325	Soil	VTESQVSFVCNCGEEIVMEVKAEEEYNVACPKCGQEYRFFGQSVLRWKSE
Ga0209267_12733812	3300026331	Soil	CGEEIVMEVKAEEEYNVACPKCGQEYRFFGQSVLRWRSE
Ga0209803_11101182	3300026332	Soil	LVTESQVSFVCNCGEEIVMDVRAEEEYNVACPKCGQEYRFFGQSVLRWKSE
Ga0209158_10293896	3300026333	Soil	VTESQVSFVCNCGEEIVMDVRAEEEYNVACPKCGQEYRF
Ga0257177_10147972	3300026480	Soil	LTESQVSFVCNCGEEILMEVKSDEEYNVVCAKCGQEYRFFGHTVLRWKSE
Ga0209059_10256232	3300026527	Soil	LTESQVSFVCNCGEEIVMEVKAEEEYNVACPKCGQEYRFFGQSVLRWKSE
Ga0209806_11564341	3300026529	Soil	YGKQKPSQSRLRVDSLVTESQVSFVCNCGEEILMEVKAEEEYNVACPKCGQEYRFFGQSVLRWKSE
Ga0209376_11294801	3300026540	Soil	LTESQVSFVCNCGEEIVMEVKAEEEYNVACPKCGQEYRFFGQS
Ga0209076_10273842	3300027643	Vadose Zone Soil	LTESQVSFVCNCGEEILMEVKSDEEYNVVCAKCGQEYRFFGQSVLRWKSEQLS
Ga0209180_100767392	3300027846	Vadose Zone Soil	LTESQVSFVCNCGEEILMEVKSDEEYNVVCAKCGQEYRFFGQSVLRWKSE
Ga0209180_103993372	3300027846	Vadose Zone Soil	LTESQISFVCNCGEEILIEVKSDKEYNVVCAKCGQEYRFFGQSVLRWKSE
Ga0209180_106660452	3300027846	Vadose Zone Soil	GKGRPSQFRFRVDPLVTETQVSFVCNCGEEIVMEVKAEEEYNVACPKCGQDYRFFGQSVLRWKSE
Ga0209701_101977742	3300027862	Vadose Zone Soil	VTETQVSFVCNCGEEIVMEVKAEEEYNVACPKCAQEYRFFGQSVLRWKAE
Ga0209283_106132941	3300027875	Vadose Zone Soil	TESQVSFVCNCGEEILMEVKSDEEYNVVCAKCGQEYRFFGHTVLRWKSE
Ga0209283_109809372	3300027875	Vadose Zone Soil	VCNCGEEILMEVKSDEEYNVVCAKCGQEYRFFGQSVLRWKSE
Ga0209590_100107054	3300027882	Vadose Zone Soil	LTESQVSFVCNCGEEILMEVKSDEEYNVVCAKCGQEYRFFGQSVLRWKSG
Ga0307477_100072745	3300031753	Hardwood Forest Soil	MSATEVSFVCNCGEEIKLNVVADEEYTVVCAKCGQEYRFTGGSVLRWGSDSRQQE
Ga0307479_100775025	3300031962	Hardwood Forest Soil	LRESEVSFVCNCGEEILMNVKPDEEYNVVCQKCGQEYRFFGHTVLRWKSQ
Ga0307471_1000573446	3300032180	Hardwood Forest Soil	LSESQVSFICNCGEEILMNVKPDEEYNVACQKCGQEYRF
Ga0307471_1033638702	3300032180	Hardwood Forest Soil	QVSFVCNCGEEILMEVKSEEEYNVVCTKCGQAYRFFGHTVLRWKSE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F081111

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences