Metagenome / Metatranscriptome Family F081143

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081143
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	87 residues
Representative Sequence	VKACAVSRTDGIATRGGRSSGHMTPRRPPDLDPKGRGDKSMLVKRGAAEDVYAVVLQRLSDMAKTGLFEPQSPGVEPHTRRQHI
Number of Associated Samples	102
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	38.18 %
% of genes near scaffold ends (potentially truncated)	65.79 %
% of genes from short scaffolds (< 2000 bps)	90.35 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (63.158 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (22.807 % of family members)
Environment Ontology (ENVO)	Unclassified (32.456 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.982 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.07% β-sheet: 0.00% Coil/Unstructured: 83.93%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF08388	GIIM	1.75
PF01844	HNH	1.75
PF00805	Pentapeptide	0.88
PF00145	DNA_methylase	0.88
PF01348	Intron_maturas2	0.88
PF00078	RVT_1	0.88
PF11535	Calci_bind_CcbP	0.88
PF13772	AIG2_2	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	0.88
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.88

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.16 %
All Organisms	root	All Organisms	36.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.16 %
cellular organisms	root	All Organisms → cellular organisms	34.21 %
Viruses	superkingdom	All Organisms → Viruses	2.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.16 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	34.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.16 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	12.28 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	12.28 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.63 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	0.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.16 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	12.28 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	10.53 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.63 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	0.88 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.88 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.88 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.16 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	11.40 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	10.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.63 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.88 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.88 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.88 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	0.88 %
Rickettsiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.16 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	11.40 %
Pseudanabaenales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales	7.02 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	2.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.63 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.88 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	0.88 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	0.88 %
Anaplasmataceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → Anaplasmataceae	0.88 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.88 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.88 %
Anaerolineales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.16 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	11.40 %
Leptolyngbyaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae	7.02 %
Oscillatoriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	2.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.63 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.88 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.88 %
Wolbachieae	tribe	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → Anaplasmataceae → Wolbachieae	0.88 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.88 %
Anaerolineaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	0.88 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.88 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.16 %
Singulisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	11.40 %
Leptolyngbya	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya	7.02 %
Coleofasciculaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Coleofasciculaceae	2.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.63 %
unclassified Anaerolineaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae	0.88 %
Wolbachia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → Anaplasmataceae → Wolbachieae → Wolbachia	0.88 %
Microvirga lotononidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lotononidis	0.88 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.88 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.88 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.88 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.16 %
unclassified Singulisphaera	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera	11.40 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya → environmental samples	7.02 %
Coleofasciculus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Coleofasciculaceae → Coleofasciculus	2.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.63 %
unclassified Wolbachia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → Anaplasmataceae → Wolbachieae → Wolbachia → unclassified Wolbachia	0.88 %
Anaerolineaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	0.88 %
Microvirga lotononidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lotononidis	0.88 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.88 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.88 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.88 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.16 %
Singulisphaera sp. GP187	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	11.40 %
uncultured Leptolyngbya sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya → environmental samples → uncultured Leptolyngbya sp.	7.02 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Coleofasciculaceae → Coleofasciculus → environmental samples	2.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.63 %
Wolbachia endosymbiont of Cylisticus convexus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → Anaplasmataceae → Wolbachieae → Wolbachia → unclassified Wolbachia → Wolbachia endosymbiont of Cylisticus convexus	0.88 %
Anaerolineaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	0.88 %
Microvirga lotononidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lotononidis	0.88 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.88 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.88 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.88 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.16 %
Singulisphaera sp. GP187	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	11.40 %
uncultured Leptolyngbya sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya → environmental samples → uncultured Leptolyngbya sp.	7.02 %
uncultured Coleofasciculus sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Coleofasciculaceae → Coleofasciculus → environmental samples → uncultured Coleofasciculus sp.	2.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.63 %
Wolbachia endosymbiont of Cylisticus convexus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → Anaplasmataceae → Wolbachieae → Wolbachia → unclassified Wolbachia → Wolbachia endosymbiont of Cylisticus convexus	0.88 %
Anaerolineaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	0.88 %
Microvirga lotononidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lotononidis	0.88 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.88 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.88 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.88 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002122\|C687J26623_10237662	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	506	Open in IMG/M
3300002124\|C687J26631_10178004	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	710	Open in IMG/M
3300002908\|JGI25382J43887_10247028	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	823	Open in IMG/M
3300002908\|JGI25382J43887_10483535	Not Available	524	Open in IMG/M
3300004479\|Ga0062595_100731785	Not Available	801	Open in IMG/M
3300004633\|Ga0066395_10258577	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	936	Open in IMG/M
3300004798\|Ga0058859_10003995	Not Available	1216	Open in IMG/M
3300005179\|Ga0066684_10811171	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300005180\|Ga0066685_10238533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lotononidis	1252	Open in IMG/M
3300005186\|Ga0066676_10084321	All Organisms → cellular organisms → Bacteria	1894	Open in IMG/M
3300005330\|Ga0070690_100534459	Not Available	882	Open in IMG/M
3300005332\|Ga0066388_100381250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2056	Open in IMG/M
3300005332\|Ga0066388_107602118	Not Available	543	Open in IMG/M
3300005338\|Ga0068868_101070236	Not Available	741	Open in IMG/M
3300005446\|Ga0066686_10326850	All Organisms → Viruses → Predicted Viral	1045	Open in IMG/M
3300005615\|Ga0070702_100142619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → Anaplasmataceae → Wolbachieae → Wolbachia → unclassified Wolbachia → Wolbachia endosymbiont of Cylisticus convexus	1528	Open in IMG/M
3300005820\|Ga0078747_103949	All Organisms → cellular organisms → Bacteria	4177	Open in IMG/M
3300005983\|Ga0081540_1283280	Not Available	571	Open in IMG/M
3300006794\|Ga0066658_10147452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya → environmental samples → uncultured Leptolyngbya sp.	1187	Open in IMG/M
3300008410\|Ga0115361_10101438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Coleofasciculaceae → Coleofasciculus → environmental samples → uncultured Coleofasciculus sp.	583	Open in IMG/M
3300009012\|Ga0066710_102710146	Not Available	706	Open in IMG/M
3300009038\|Ga0099829_10593244	Not Available	921	Open in IMG/M
3300009038\|Ga0099829_11762688	Not Available	507	Open in IMG/M
3300009088\|Ga0099830_11173231	Not Available	637	Open in IMG/M
3300009137\|Ga0066709_101226788	Not Available	1103	Open in IMG/M
3300009137\|Ga0066709_102807421	Not Available	646	Open in IMG/M
3300009143\|Ga0099792_10159744	Not Available	1250	Open in IMG/M
3300009809\|Ga0105089_1019738	Not Available	903	Open in IMG/M
3300009813\|Ga0105057_1059493	Not Available	644	Open in IMG/M
3300009822\|Ga0105066_1101851	Not Available	635	Open in IMG/M
3300010029\|Ga0105074_1098552	Not Available	552	Open in IMG/M
3300010077\|Ga0127437_126957	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	675	Open in IMG/M
3300010081\|Ga0127457_1075327	Not Available	656	Open in IMG/M
3300010087\|Ga0127492_1090759	Not Available	1194	Open in IMG/M
3300010114\|Ga0127460_1057923	Not Available	528	Open in IMG/M
3300010115\|Ga0127495_1014326	Not Available	671	Open in IMG/M
3300010115\|Ga0127495_1115174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya → environmental samples → uncultured Leptolyngbya sp.	533	Open in IMG/M
3300010141\|Ga0127499_1084130	Not Available	709	Open in IMG/M
3300010166\|Ga0126306_10678265	Not Available	825	Open in IMG/M
3300010398\|Ga0126383_13129121	Not Available	540	Open in IMG/M
3300011118\|Ga0114922_10008759	All Organisms → cellular organisms → Bacteria → Proteobacteria	9221	Open in IMG/M
3300011270\|Ga0137391_11369084	Not Available	554	Open in IMG/M
3300012189\|Ga0137388_11861726	Not Available	533	Open in IMG/M
3300012199\|Ga0137383_10272063	Not Available	1241	Open in IMG/M
3300012201\|Ga0137365_10806530	Not Available	685	Open in IMG/M
3300012202\|Ga0137363_10300717	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	1317	Open in IMG/M
3300012206\|Ga0137380_11139722	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	663	Open in IMG/M
3300012207\|Ga0137381_10443178	Not Available	1133	Open in IMG/M
3300012211\|Ga0137377_10109070	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	2628	Open in IMG/M
3300012351\|Ga0137386_10156158	Not Available	1633	Open in IMG/M
3300012354\|Ga0137366_10189137	All Organisms → Viruses → Predicted Viral	1541	Open in IMG/M
3300012359\|Ga0137385_10303787	Not Available	1372	Open in IMG/M
3300012362\|Ga0137361_10808434	Not Available	853	Open in IMG/M
3300012362\|Ga0137361_10990935	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	760	Open in IMG/M
3300012362\|Ga0137361_11344611	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	638	Open in IMG/M
3300012363\|Ga0137390_10389495	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1373	Open in IMG/M
3300012363\|Ga0137390_11453132	Not Available	628	Open in IMG/M
3300012380\|Ga0134047_1155937	Not Available	863	Open in IMG/M
3300012390\|Ga0134054_1293430	Not Available	1202	Open in IMG/M
3300012396\|Ga0134057_1142389	Not Available	627	Open in IMG/M
3300012397\|Ga0134056_1095332	Not Available	708	Open in IMG/M
3300012397\|Ga0134056_1172081	Not Available	620	Open in IMG/M
3300012401\|Ga0134055_1041476	Not Available	534	Open in IMG/M
3300012402\|Ga0134059_1202645	Not Available	620	Open in IMG/M
3300012406\|Ga0134053_1105028	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	844	Open in IMG/M
3300012410\|Ga0134060_1092679	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	659	Open in IMG/M
3300012410\|Ga0134060_1344567	Not Available	617	Open in IMG/M
3300012469\|Ga0150984_121258231	Not Available	584	Open in IMG/M
3300012489\|Ga0157349_1006309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya → environmental samples → uncultured Leptolyngbya sp.	855	Open in IMG/M
3300012971\|Ga0126369_11781826	Not Available	704	Open in IMG/M
3300014150\|Ga0134081_10293171	Not Available	582	Open in IMG/M
3300014154\|Ga0134075_10207128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya → environmental samples → uncultured Leptolyngbya sp.	844	Open in IMG/M
3300014885\|Ga0180063_1212293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya → environmental samples → uncultured Leptolyngbya sp.	622	Open in IMG/M
3300014968\|Ga0157379_10747864	Not Available	920	Open in IMG/M
3300015264\|Ga0137403_10246618	All Organisms → cellular organisms → Bacteria	1698	Open in IMG/M
3300016270\|Ga0182036_11308623	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	605	Open in IMG/M
3300016445\|Ga0182038_10624894	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	932	Open in IMG/M
3300017965\|Ga0190266_11281140	Not Available	513	Open in IMG/M
3300018082\|Ga0184639_10241797	Not Available	955	Open in IMG/M
3300019259\|Ga0184646_1559550	Not Available	555	Open in IMG/M
3300019269\|Ga0184644_1215978	Not Available	508	Open in IMG/M
3300025898\|Ga0207692_10490196	Not Available	778	Open in IMG/M
3300025961\|Ga0207712_11462014	Not Available	612	Open in IMG/M
3300026023\|Ga0207677_10906463	Not Available	795	Open in IMG/M
3300026035\|Ga0207703_10506980	Not Available	1133	Open in IMG/M
3300026296\|Ga0209235_1211759	Not Available	643	Open in IMG/M
3300026297\|Ga0209237_1229999	Not Available	573	Open in IMG/M
3300026313\|Ga0209761_1217592	Not Available	806	Open in IMG/M
3300026318\|Ga0209471_1240317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya → environmental samples → uncultured Leptolyngbya sp.	635	Open in IMG/M
3300026325\|Ga0209152_10088210	Not Available	1152	Open in IMG/M
3300026377\|Ga0257171_1067219	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	627	Open in IMG/M
3300027561\|Ga0209887_1006956	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	3121	Open in IMG/M
3300027846\|Ga0209180_10121433	Not Available	1499	Open in IMG/M
3300027875\|Ga0209283_10488012	Not Available	794	Open in IMG/M
3300027875\|Ga0209283_10743267	Not Available	609	Open in IMG/M
3300027882\|Ga0209590_10569489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya → environmental samples → uncultured Leptolyngbya sp.	730	Open in IMG/M
3300027901\|Ga0209427_10148281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	2021	Open in IMG/M
3300027917\|Ga0209536_103377755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Coleofasciculaceae → Coleofasciculus → environmental samples → uncultured Coleofasciculus sp.	504	Open in IMG/M
3300027952\|Ga0209889_1075493	Not Available	687	Open in IMG/M
3300027961\|Ga0209853_1108013	Not Available	700	Open in IMG/M
3300030717\|Ga0307927_1052429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Coleofasciculaceae → Coleofasciculus → environmental samples → uncultured Coleofasciculus sp.	534	Open in IMG/M
3300030830\|Ga0308205_1031166	Not Available	654	Open in IMG/M
3300031092\|Ga0308204_10027893	All Organisms → Viruses → Predicted Viral	1227	Open in IMG/M
3300031231\|Ga0170824_114077929	Not Available	510	Open in IMG/M
3300031546\|Ga0318538_10797214	Not Available	513	Open in IMG/M
3300031740\|Ga0307468_100872190	Not Available	777	Open in IMG/M
3300031879\|Ga0306919_10405757	Not Available	1046	Open in IMG/M
3300031880\|Ga0318544_10326509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya → environmental samples → uncultured Leptolyngbya sp.	596	Open in IMG/M
3300031885\|Ga0315285_10107770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2412	Open in IMG/M
3300032261\|Ga0306920_101489510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	967	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.98%
Host-Associated	Host-Associated	7.02%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.21%
Aquatic	Environmental → Aquatic	8.77%
Plants	Host-Associated → Plants	6.14%
Human	Host-Associated → Human	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.21%
Marine	Environmental → Aquatic → Marine	3.51%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.51%
Freshwater	Environmental → Aquatic → Freshwater	2.63%
Sediment	Environmental → Aquatic → Sediment	2.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.63%
Digestive System	Host-Associated → Human → Digestive System	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.30%
Loam	Environmental → Terrestrial → Soil → Loam	7.89%
Sand	Environmental → Terrestrial → Soil → Sand	6.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.51%
Oceanic	Environmental → Aquatic → Marine → Oceanic	2.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.63%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.75%
Lake	Environmental → Aquatic → Freshwater → Lake	0.88%
Coastal	Environmental → Aquatic → Marine → Coastal	0.88%
Clay	Environmental → Terrestrial → Soil → Clay	0.88%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.88%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	46.49%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.04%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.89%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	6.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.51%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.51%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	2.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.63%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.75%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.75%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.88%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.88%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.88%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	22.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	17.54%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.14%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	6.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.51%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.63%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.75%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	1.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.75%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.75%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.88%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	0.88%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	0.88%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.88%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.88%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.88%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.88%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.88%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.88%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.88%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.88%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002122	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_2	Environmental	Open in IMG/M
3300002124	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_3	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005820	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 75 cmbsf, PM2	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300008410	Sea floor sediment microbial communities from Gulf of Mexico Methane Seep - MPC5T	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009809	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40	Environmental	Open in IMG/M
3300009813	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010077	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010081	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010087	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010114	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010115	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010141	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011118	Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012380	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012390	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012396	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012397	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012401	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012402	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012406	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012410	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012489	Unplanted soil (control) microbial communities from North Carolina - M.Soil.5.yng.040610	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014885	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10D	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027901	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-36_30 (SPAdes)	Environmental	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M
3300027952	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300030717	Metatranscriptome of soil microbial communities from Risofladan, Vaasa, Finland - UN-3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030830	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031885	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_36	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C687J26623_102376621	3300002122	Soil	HGERCAVKVCAVSRTDGITTRGGRSSGQMTPRRTTDLDPKGRGDKSLLVKRGTAKDVYAAVLQRLSDMAKTGLFESQSPGVETHTRR*
C687J26631_101780043	3300002124	Soil	KGCAVSRTDGITTRGGRSSGQMTPRRTTDLDPKGRGDKSLLVKRGTAKDVYAAVLQRLSDMAKTGLFESQSPGVETHTRR*
JGI25384J37096_101947441	3300002561	Grasslands Soil	RSVELAKWTFPIISFSREPYARKGCAVSRTEGIATRGGRSSGHMTPRRPPDLDPKGRGDKRMVGKRGVTEDVYVAVLQRLNDRAKTGLFEPQYPGVEAHTRRQHI*
JGI25382J43887_102470281	3300002908	Grasslands Soil	VELAKRTFPIISLCREPYEAKVCAVSRTDGIATRGGRSSGSMTPRRTTDLDPKGRGDKSMLXKRGAAEDVYAVVLQRLSDRAKTGLFEPQSPGVEPHTRR*
JGI25382J43887_104835351	3300002908	Grasslands Soil	EPYARKRCAVSRTEGIATRGGRSSGHMTPRRPPDLDPKGRGDKRMVGKRGVTEDVYVAVLQRLNDRAKTGLFEPQYPGVEAHTRRQHI*
Ga0062595_1007317852	3300004479	Soil	LAKWTLPIISLCREPYEAKVCAVSRTDGIATRGGRSSGPMTPRRTIYLDPKGRGDKSMLVKRGTVEDVYAVVLQRLSDMAKTGLSESQSPGVEPHTRR*
Ga0066395_102585771	3300004633	Tropical Forest Soil	YAVKVCAVSRTEGIATRGGRSSGHMTPRRPPDLDLKGRGDKSMVGKRGTAEDVYAVVLQRLSDKAKTGLFESQSPGVEPHTRRQHI*
Ga0058859_100039952	3300004798	Host-Associated	MPLSREPCAAKVCAVSRTDGIATRGGRSSGPMTPRRTIYLDPKGRGDKSMLVKRGTVEDVYAVVLQRLSDMAKTGLSES*
Ga0066684_108111712	3300005179	Soil	VKVCAVSRTDGIATRGGRSSGSITPRRTTDLDPKGRGDKSMLVKRGTAEDVYAVVLQRLSDTAKTGLFEPQSPGVEPHTRWQHI*
Ga0066685_102385331	3300005180	Soil	MKVCAVSRTDGIATRGGRSSGSMTPRRTTHLDPKGRGDKSMLVKRGTAEDVYAVVLQRLSDRAKTALFEPQSPGVEPHTRR*
Ga0066676_100843212	3300005186	Soil	MPQSKDEDRSESAEPDAMKVCAVSRTEGIATRGGRSSGHMTPRRPPDLDLKGRGDKRMVGKREAAEDVYAVVLQRLSDMAKTALFE
Ga0070690_1005344592	3300005330	Switchgrass Rhizosphere	AKVCAVSRTDGIATRGGRSSGPMTPRRTIYLDPKGRGDKSMLVKRGTVEDVYAVVLQRLSDMAKTGLSES*
Ga0066388_1003812502	3300005332	Tropical Forest Soil	LCREPYEAKVCAVSRTDGIATRGGRSSGSMTPRRTTDLDPKGRGDKSMLVKRGTAEDVYAVVLQRLSDKAKTGLFESQSPGVEPHTRRQHI*
Ga0066388_1076021181	3300005332	Tropical Forest Soil	MKACAVSRTDGIATRGGRSSGFMTPRRTTDLDPKGRGDKSMLVKQGTAEDVYAVVLQRLSDKAKTGLFEP*
Ga0068868_1010702361	3300005338	Miscanthus Rhizosphere	KVCAVSRTDGIATRGGRSSGPMTPRRTIYLDPKGRGDKSMLVKRGTVEDVYAVVLQRLSDRAKTGLSESQSPGVEPHTRR*
Ga0066686_103268502	3300005446	Soil	MESMNGKHAVIPASREPCAVKACAVSRTEGIATRGGRSSGHMTPRRPPDLDPKGRGDKRMVGKREAVEDVYAVVLQRLSDMAKTALFEP*
Ga0070702_1001426191	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VCAVSRTDGIATRGGRSSGPMTPRRTIYLDPKGRGDKSMLVKRGTVEDVYAVVLQRLSDMAKTGLSES*
Ga0078747_1039493	3300005820	Marine Sediment	VIRKPCAVSRTERIANRVGRSSGQMTPRRTTYLDPKGRGDKSMSVKRGTTEDVYVVALQRLSDMAKAILPEPQCPAVELHTLR*
Ga0081540_12832801	3300005983	Tabebuia Heterophylla Rhizosphere	EASDARQRPLESCLRSKECAVSRTERIASRGGRSSEQMTPRRPPDLDPKGRGDKRMVGKQGTAEDGYAVALQRLNDRVKAGLPEPQCPVVETHTRW*
Ga0066658_101474521	3300006794	Soil	PIAVTFLSMGTGEPDTSKVCAVSRTDGIATRGGRSSGLMTPRRPPNLDPKGRGDKSMVGKRGAAEDVCAVVLQRLSDKAKTGLFASQSPGVEPHTRR*
Ga0115361_101014381	3300008410	Sediment	MLEPCEGRLCAVSRTERIANRVGRSSGHKTPRRTTNLDPKGRGDKSMSVKRGITEDVYVVALQRLSDMAKATLPEPQCPVSSVVRPDGWA
Ga0066710_1027101461	3300009012	Grasslands Soil	TVELAKWTFPIISLCREPYEAKVCAVSRTDGIATRGGRSSGHMTPRRPPDLDPKGRGDKRMVGKREAAEDVYAVVLQRLSDMAKTALFEP
Ga0099829_105932441	3300009038	Vadose Zone Soil	MEVSCKVSLCREPCAMKVCAVSRTEGIATRGGQSSGLMTPRRPPDLDPKGRGDKRMVGKRGVTEDGYVAVLQRLNDRAKTGLFAP
Ga0099829_117626881	3300009038	Vadose Zone Soil	MGRNASNDIRRLTKGGEPDAVRACAVSRTDGIATRGGRSSGSKTPRRTTDLDPKGRGDKSMLVKRGTAEDVYAVVLQRLSDKAKTGLFASQSPGVEPH
Ga0099830_111732311	3300009088	Vadose Zone Soil	VRFRVSLDGSAQSGSSRTEGIATRGGRSSGHMTPRRPPDLDPKGRGDKRMVGKREAAEDVYAVVLQRLSDMAKTALFEP*
Ga0066709_1012267882	3300009137	Grasslands Soil	MKACAVSRTDGIATRGGRSSGDMTPRRPPDLDPKGRGDKRMVGKREAVEDVYAVVLQRLSDMAKTALFEP*
Ga0066709_1028074211	3300009137	Grasslands Soil	MKVCAVSRTDGIATGGGRSSGLMTPRRTTNLDPKGRGDKSMLGKRGTAEDVYAVVLQRLSDKAKTALFESQSPGVEPHTRR*
Ga0099792_101597442	3300009143	Vadose Zone Soil	MKVCAVSRTEGIATRGGRSSGHMTPRRPPDLDPKGRGDKRMVGKRGVTEDVYVAVLQRLNDRAKTGLFEPQYPGVEAHTRRQHI*
Ga0105089_10197381	3300009809	Groundwater Sand	SESAEPDAMRVCAVSRTEGIATRGGRSSGHMTPRRPPDLDPKGRGDKRMVGKREAVEDVYAVVLQRLSDMAKTALCEP*
Ga0105057_10594931	3300009813	Groundwater Sand	DTRDKGPSTEEPCAGKLCAVVRTNRIATGGGRRSRQVTPRRTTDLDPKGRGDKSMLVKQGTAEDVYAVVLQRLHDRAKTALSQSQSPGVEAAHSSVAHL*
Ga0105066_11018511	3300009822	Groundwater Sand	RGCAVSRTDGIATRGGRSSGSMTPRRPPDLDPKGRGDKRMVGKQEAVEDVDAVVLQRLIDRAKTALFEP*
Ga0105074_10985521	3300010029	Groundwater Sand	TDGIATRGGRSSGSMTPRRPPDLDPKGRGDKRMVGKREAAEDVYAVVLQRLSDTAKTGVFESQSPGVEPHTRRQHI*
Ga0127437_1269571	3300010077	Grasslands Soil	VELAKWTFPVISLSREPYEAKVCAVSRTDGIATRGGRSSGHMTPRRPPDLDLKGRGDKRMVGKREAAEDVYAVVPQRLNDMAKTALFEP*
Ga0127457_10753271	3300010081	Grasslands Soil	MVDSMESMNGKHAVIPASREPCAVKACAVSRTEGIATRGGRSSGHMTPRRPPDLDPKGRGDKRMVGKQEAGEDVYAVVLQRLSDMAKTALFEP*
Ga0127492_10907591	3300010087	Grasslands Soil	MVDSMESMNGKHAVIPASRQPCAVKACAVSRTEGIATRGGRSSGHMTPRRPPDLDPKGRGDKRMVGKQEAGEDVYAVVLQRLSDMAKTALFEP*
Ga0127460_10579231	3300010114	Grasslands Soil	MKVCAVSRTDGIATRGGRSSGLMTPRRPPYLDPKGRGDKRMVGKRGATEDVYVAVLQRLNDKAKTGLFEPQYPGVEAHTRRQHI*
Ga0127495_10143261	3300010115	Grasslands Soil	RMCENASAAGVGAPDVVKACAVSRTDGIATRGGRSSGLMTPRRPPYLDPKGRGDKRMVGKRGATEDVYVAVLQRLNDKAKTGLFEPQYPGVEAHTRRQHI*
Ga0127495_11151741	3300010115	Grasslands Soil	RTEGIATRGGRSSGLMTPRRTTYLDPKGRGDKSLLVKRETAEDVYAVVLQRLSDRAKTGLFEPQSPGVEPHTRR*
Ga0127499_10841301	3300010141	Grasslands Soil	MLERHALKGCAVSRTDGIATRGGRSSGLMTPRRPPYLDPKGRGDKRMVGKRGATEDVYVAVLQRLNDKAKTGLFEPQYPGVEAHTRRQHI*
Ga0126306_106782651	3300010166	Serpentine Soil	PLLELGAARVCAVSRTDGIATRGGRSSGEMTPRRTTDLDPKGRGDNSMLLKRETGEDVYAVVLQRLSDMAKTGLSQSQSPGVEPHTRR*
Ga0126383_131291211	3300010398	Tropical Forest Soil	WTFPIISLAREPYEVKVCAVSRTEGIATRGGRSSGHMTPRRPPDLDLKGRGDKSMVGKRGTAEDVYAVVLQRLSDKAKTGLCESQSPGVEPHTRRQHI*
Ga0114922_100087598	3300011118	Deep Subsurface	MAARPVRGAFGRLEPRAGKLCAVKRAEGIANVVGRSSGQMTPRRTTNLDPKGKGDKSMSVKRGTTEDVYVVALQRLSDMAKAGIA*
Ga0137391_113690842	3300011270	Vadose Zone Soil	DHGEVRGVGEMEVSCKVSLCREPCAMKVCAVSRTEGIATRGGQSSGLMTPRRTTHLDPKGRGDKSLLVKQGAGEDVYAVVLQRLSDRAKTGLCES*
Ga0137388_118617261	3300012189	Vadose Zone Soil	LSQSKDQERSQGVEPDAVKVCAVSRTDEIATRGGRSSGPMTPRRTTNLDPKGRGDKSMLVKRGAAEDVYAVALQRLSDMAKTRLFEPQSPGVEPHTRR*
Ga0137383_102720631	3300012199	Vadose Zone Soil	CAVSRTEGIATRGGRSSGHMTPRRPPDLDPKGRGDKRMVGKRGVTEDVYVAVLQRLNDRAKTGLFEPQYPGVEAHTRRQHI*
Ga0137365_108065301	3300012201	Vadose Zone Soil	RTEGIATRGGRSSGHMTPRRPPDLDPKGRGDKRMVGKRGVTEDVYVAVLQRLNDRAKTGLFEPQYPGVEAHTRRQPI*
Ga0137363_103007171	3300012202	Vadose Zone Soil	VNSVELAKWTFPVISLSREPYEAKVCAVSRTEGIATRGGRSSGHMTPRRPPDLDPKGRGDKRMVGKREAAEDVYAVVLQRLSDMAKTALFEP*
Ga0137362_113194372	3300012205	Vadose Zone Soil	STNAQAAQGEYLGVAAIETSHKRSFSREPCAVKACAVSRTEGIATRGGRSSGHMTPRRPPDLDPKGRGDKRMVGKRGVTEDVYVAVLQRLNDRAKTALFELQSPGVEPHTRRQHI*
Ga0137380_111397221	3300012206	Vadose Zone Soil	EGIATRGGRSSGHMTPRRPPDLDPKGRGDKRMVGKREAAEDVYAVVLQRLSDMAKTALFEP*
Ga0137381_104431781	3300012207	Vadose Zone Soil	MLTDHEVRLWNRTKDGEPYARKGCAVSRTEGIATRGGRSSGHMTPRRPPDLDPKGRGDKRMVGKRGVTEDVYVAVLQRLNDRAKTGLFEPQYPGVEAHTRRQHI*
Ga0137377_101090703	3300012211	Vadose Zone Soil	MLTDHEVRLWNRTEDGEPYARKRCAVSRTEGIATRGGRSSGHMTPRRPPDLDPKGRGDKRMVGKRGVTEDVYVAVLQRLNDRAKTGLFEPQYPGVEAHTRRQHI*
Ga0137386_101561581	3300012351	Vadose Zone Soil	YEVKGCAVSRTEGIATRGGRSSGHMTPRRPPDLDPKGRGDKRMVGKRGVTEDVYVAVLQRLNDRAKTGLFEPQYPGVEAHTRRQHI*
Ga0137366_101891372	3300012354	Vadose Zone Soil	MLTDHEVRLWNRTEDGEPYARKRCAVSRTEGIATRGGRSSGHMTPRRPPDLDPKGRGDKRMVGKRGVTEDVYVAVLQRLNDRAKTGLFEPQYPGVEAHTRRQPI*
Ga0137385_103037871	3300012359	Vadose Zone Soil	MLTDHEVRLWNRTEDGEPYTRKGCAVSRTEGIATRGGRSSGHMTPRRPPDLDPKGRGDKRMVGKRGVTEDVYVAVLQRLNDRAKT
Ga0137361_108084341	3300012362	Vadose Zone Soil	IATRGGRSSGHMTPRRPPDLDPKGRGDKRMVGKRGVTEDVYVAVLQRLNDRAKTGLFEPQYPGVEAHTRRQHI*
Ga0137361_109909351	3300012362	Vadose Zone Soil	VKVCAVSRTEGIATRGGRSSGHMTPRRPPDLDPKGRGDKRMVGKREAAEDVYAVVLQRLSDMAKTALFEP*
Ga0137361_113446111	3300012362	Vadose Zone Soil	MKACAVSRTEGIATRGGRSSGHMTPRRPPDLDPKGRGDKRMVGKREAVEDVYTVVLQRLSDMAKTTLFEP*
Ga0137390_103894951	3300012363	Vadose Zone Soil	MPRLSKTTGEPCAMKVCAVSRTDGIATRGGRSSGFMTPRRPPNLDPKGRGDKSMVGKRGAAEDVCAVVLQRLSDM
Ga0137390_114531321	3300012363	Vadose Zone Soil	MTKGAAPCAVKVCAVSRTDGIATRGGRSSGLMTPRRPPNLDPKGRGDKSMVGKRGAAEDVCAVVLQRLSDM
Ga0134047_11559372	3300012380	Grasslands Soil	MESMNGKHAVIPASREPCAVKACAVSRTEGIATRGGRSSGHMTPRRPPDLDPKGRGDKRMVGKQEAGEDVYAVVLQRLSDKAKTGLFASQS
Ga0134054_12934302	3300012390	Grasslands Soil	MVDSMESMNGKHAVIPASREPCAVKACAVSRTEGIATRGGRSSGHMTPRRPPDLDPKGRGDKRMVGKREAAEDVYAVVLQRLSDMAKTALFEP*
Ga0134057_11423891	3300012396	Grasslands Soil	GGLWKRTNMATRHEPTQQPYEVKACAVSRTDGIATRGGRSSGLMTPRRPPYLDPKGRGDKRMVGKRGATEDVYVAVLQRLNDKAKTGLFEPQYPGVEAHTRRQHI*
Ga0134056_10953321	3300012397	Grasslands Soil	VDSMESMNGKHAVIPASREPCAVKACAVSRTEGIATRGGRSSGHMTPRRPPDLDPKGRGDKRMVGKREAVEDVYAVVLQRLSDMAKTALFEP*
Ga0134056_11720811	3300012397	Grasslands Soil	ACAVSRTDGIATRGGRSSGLMTPRRPPYLDPKGRGDKRMVGKRGATEDVYVAVLQRLNDKAKTGLFEPQYPGVEAHTRRQHI*
Ga0134055_10414762	3300012401	Grasslands Soil	VKACAVSRTDGIATRGGRSSGLMTPRRPPYLDPKGRGDKRMVGKRGATEDVYVAVLQRLNDKAKTGLFEPQYPGVEAHTRRQHI*
Ga0134059_10825411	3300012402	Grasslands Soil	HEPSDHKSQRLCSTAGWMPDDKGRITEEPCAIKVCAVSRTEGIATRGGRSSGLMTPRRTTYLDPKGRGDKSLLVKRETAEDVYAVVLQRLSDRAKTGLFEPQSPAVEWHTRR*
Ga0134059_12026452	3300012402	Grasslands Soil	KACAVSRTDGIATRGGRSSGLMTPRRPPYLDPKGRGDKRMVGKRGATEDVYVAVLQRLNDKAKTGLFEPQYPGVEAHTRRQHI*
Ga0134053_11050282	3300012406	Grasslands Soil	TLQAPNGPAPEARVCAVSRTDGIATRGGRSSGLMTPRRTTYLDPKGRGDKSLLVKRETAEDVYAVVLQRLSDRAKTGLFEPQSPAVEWHTRR*
Ga0134060_10926791	3300012410	Grasslands Soil	KVCAVSRTEGIATRGGRSSGLMTPRRTTYLDPKGRGDKSLLVKRETAEDVYAVVLQRLSDRAKTGLFEPQSPAVEWHTRR*
Ga0134060_13445672	3300012410	Grasslands Soil	CAVSRTDGIATRGGRSSGLMTPRRPPYLDPKGRGDKRMVGKRGATEDVYVAVLQRLNDKAKTGLFEPQYPGVEAHTRRQHI*
Ga0150984_1212582311	3300012469	Avena Fatua Rhizosphere	MKACAVSRTDGIATRGGRSSGFMTPRRTTDLDPKGRGDKSMLIKRGTTEDVYVVVLQRLSDKAKTALFESQSPGVEAAHSSVAHL*
Ga0157349_10063092	3300012489	Unplanted Soil	REPYEAKVCAVSRTDGIATRGGRSSGHMTPRRTTDLDPKGRGDKSMLIKRGTAEDVYAVVLQRLSDKAKTGLFEPQSPAVERHTRR*
Ga0126369_117818261	3300012971	Tropical Forest Soil	PYEAKVCAVSRTDGIATRGGRSSGLMTPRRTTYLDPKGRGDKSMLGKRGTAEDVYAVVLQRLSDMAKTGLSASQSPGVEPHTRR*
Ga0134081_102931711	3300014150	Grasslands Soil	REPYEAKVCAVSRTDGIAARGGRSSGSMTPRRTTDLDPKGRGDKSMLGKRGTAEDVYAVVLQRLSDTAKTGLFEPQSPGVEPHTRWQHI*
Ga0134075_102071281	3300014154	Grasslands Soil	FPIISLSREPYEAKVCAVSRTDGIATRGGRSSGLMTPRRTTHLDPKGRGDKSMLGKRGTAEDVYAVVLQRLSDKAKTALFESQSPGVEPHTRR*
Ga0180063_12122932	3300014885	Soil	KGAEPYEVNVCAVSRTDGIATRGGWSSGPMTPRRTTHLDPKGRGDKSMLVKRGAAEDVYAVVLQRLSDRAKTGLFASQSPGVEAHTRRQHI*
Ga0157379_107478641	3300014968	Switchgrass Rhizosphere	ISLCREPYEAKVCAVSRTDGIATRGGRSSGPMTPRRTIYLDPKGRGDKSMLVKRGTVEDVYAVVLQRLSDMAKTGLSES*
Ga0137403_102466182	3300015264	Vadose Zone Soil	MLERRAVKVCAVSRTDGIATRGGRSSGLMTPRRTTDLDPKGRGDKSMLGKRGTVEDVYAVVLQRLSDRAKTALFEPQSPGVEPHTRR*
Ga0182036_113086231	3300016270	Soil	LCREPYEAKVCAVSRTDGIATRGGRSSGFMTPRRTTDLDPKGRGDKSMLVKQGTAEDVYTVVLQRLSDRAKTALFEPQSPGVEPHTRR
Ga0182038_106248941	3300016445	Soil	LRKWEGRLLTYVRRWTKGGEPDAVKACAVSRTDGIATRGGRSSGFMTPRRTTDLDPKGRGDKSMLVKQGTAEDVYAVVLQRLSDRAKTALFEPQSPGVEPHTRR
Ga0190266_112811401	3300017965	Soil	RTAGVKPYTMKVCAVSRTDGIATRGGRSSGLMTPRRTTHLDPKGRGDKRMVGKREAAEDVYAVVLQRLSDMAKTGLFESQSPGVEPHTRRQHI
Ga0184639_102417972	3300018082	Groundwater Sediment	MALTQAKETRETGEPDAVKVCAVSRTEGIATRGGRSSGHMTPRRPPDLDPKGRGDKRMVGKRGATEDVYVVVLQRLNDRAKTGLFEPQYPGVEAHTRRQHI
Ga0184646_15595501	3300019259	Groundwater Sediment	KDGEPCAMKVCAVSRTDGIATRGGRSSGHMTPRRPPDLDPKGRGDKRMVGKREAVEDVYAVVLQRLSDMAKTALFEP
Ga0184644_12159781	3300019269	Groundwater Sediment	REPYEAKVCAVSRTEGIATRGGRSSGSMTPRRTTNLDPKGRGDKSMLGKRGTAEDVYAVVLQRLSDMAKTALFEP
Ga0207692_104901962	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	WPWRKTKGVKPGAVKACAVSRTDGIATRGGRSSGHMTPRRPPNLDPKGRGDKSMVGKRGAAEDVYAVALQRLSDMAKTGLFEP
Ga0207712_114620142	3300025961	Switchgrass Rhizosphere	GEPDAAKVCAVSRTDGIATRGGRSSGPMTPRRTIYLDPKGRGDKSMLVKRGTVEDVYAVVLQRLSDMAKTGLSES
Ga0207677_109064631	3300026023	Miscanthus Rhizosphere	MTSGAEPGAVKACAVSRTDGIATRGGRSSGPMTPRRTIYLDPKGRGDKSMLVKRGTVEDVYAVVLQRLSDRAKTGLSESQSPGVEPHTRR
Ga0207703_105069802	3300026035	Switchgrass Rhizosphere	MATDAPCYAWRMTSGAEPGAVKACAVSRTDGIATRGGRSSGLKTPRRTTDLDPKGRGDKSMLVKRGTAEDVYAVVLQRLSDMA
Ga0209235_12117591	3300026296	Grasslands Soil	MLTDHEVRLWNRTEDGEPYARKGCAVSRTEGIATRGGRSSGHMTPRRPPDLDPKGRGDKRMVGKRGVTEDVYVAVLQRLNDRAKTGLFEPQYPGVEAHTRRQHI
Ga0209237_12299991	3300026297	Grasslands Soil	KGSVTEEPCAGKGCAVSRTEGIATRGGRSSGHMTPRRPPDLDPKGRGDKRMVGKRGVTEDVYVAVLQRLNDRAKTGLFEPQYPGVEAHTRRQHI
Ga0209761_12175922	3300026313	Grasslands Soil	TPLCREPYEAKVCAVSRTDGIATRGGRSSGSMTPRRTTDLDPKGRGDKSMLVKRGTAEDVYAVVLQRLSDTAKTGLFESQSPGVEPHTRWQHI
Ga0209471_12403171	3300026318	Soil	EPDAIKVCAVSRTDGIATRGGRSSGFMTPRRPPNLDPKGRGDKSMVGKRGAAEDVYAVVLQRLSDKAKTGLFASQSPGVEPHTRR
Ga0209152_100882101	3300026325	Soil	MKVCAVSRTDGIATRGGRSSGFMTPRRTTDLDPKGRGDKSMLVKRGTAEDVYAVVLQRLSDMAKTALFEP
Ga0257171_10672192	3300026377	Soil	LTKGVEPCAVKACAVSRTEGIATRGGRSSGHMTPRRPPDLDPKGRGDKRMVGKREAAEDVYAVVLQRLSDMAKTALFEP
Ga0209684_10247831	3300027527	Tropical Forest Soil	ELSDHKAQRRCTTAGGMPDDKGRITEEPCAIKVCAVSRTDGIATRGGRSSGPMTPRRTTYLDPKGRGDKSMLVKRGTVEDVYAVVLQRLSDMAKTGLSESQSPGVEPHTRR
Ga0209887_10069564	3300027561	Groundwater Sand	MLERRAVKVCAVSRTDGIATRGGRSSGSMTPRRTTDLDPKGRGDKSMLVKRGTAEDVYAVVLQRLSDRAKTGMALS
Ga0209180_101214333	3300027846	Vadose Zone Soil	VRFRVSLDGSAQSGSSRTEGIATRGGRSSGHMTPRRPPDLDPKGRGDKRMVGKREAVEDVYAVVLQRLSDMAKTALFEP
Ga0209283_104880121	3300027875	Vadose Zone Soil	DLPSPQERARVRFRVSLDGSAQSGSSRTEGIATRGGRSSGHMTPRRPPDLDPKGRGDKRMVGKREAVEDVYAVVLQRLSDMAKTALFEP
Ga0209283_107432671	3300027875	Vadose Zone Soil	MGRNASNDIRRLTKGGEPDAVRACAVSRTDGIATRGGRSSGFMTPRRPPNLDPKGRGDKSMVGKRGAAEDVCAVV
Ga0209590_105694891	3300027882	Vadose Zone Soil	GVEPDAVKVCAVSRTDGIATRGGRSSGLMTPRRPPNLDPKGRGDKSMVGKRGAAEDVCAVVLQRLSDTAKTGLFASQSPGVEPHTRR
Ga0209427_101482813	3300027901	Marine Sediment	PDDAKACAVSRTERIANRVGRSSGQMTPRRTTNLDPKGRGDKSMSVKRGAAEDVYAVALQRLSDMAKAGIA
Ga0209536_1033777551	3300027917	Marine Sediment	MLEPCEGRLCAVSRTERIATRGGRSSGYKTPRRTTYLDPKGKGDKSMSVKRGAIEDVYIVVLQCLSNMAKAKLPESQCPAVKLHTLR
Ga0209889_10754931	3300027952	Groundwater Sand	VSRTDGIATRGGRSSGSMTPRRTTDLDPKGRGDKSMLVKRGTAEDVYAVVLQRLSDTAKTGLFESQSPGVEPHTRRQHI
Ga0209853_11080131	3300027961	Groundwater Sand	VKVCAVSRTEGIATRGGRSSGHMTPRRPPDLDPKGRGDKRMVGKQEAVEDVDAVVLQRLSDRAKTALFEP
Ga0307927_10524291	3300030717	Soil	PDDGKLCAVSRTERIATRGGRSSGQMTPRRTTYLDSKERGDNSMFVKRGTAEDVYGVALQRLSDMAKAGLLESQCPVVEWHTHW
Ga0308205_10311661	3300030830	Soil	TASKKIPDGEPDAGKTCAVSRTEGIATRGGRSSGHMTPRRPPDLDPKGRGDKRMVGKREAVEDVYTVVLQRLSDMAKTTLFEP
Ga0308204_100278931	3300031092	Soil	MEGAKPCAVKGCAVSRTEGIATRGGRSSGHMTPRRPPDLDPKGRGDKRMVGKREAVEDVYTVVLQRLSDMAKTTLFEP
Ga0170824_1140779291	3300031231	Forest Soil	VKACAVSRTDGIATRGGRSSGHMTPRRPPDLDPKGRGDKSMLVKRGAAEDVYAVVLQRLSDMAKTGLFEPQSPGVEPHTRRQHI
Ga0318538_107972141	3300031546	Soil	CRGTKQGTLGHYSMLELYEGKLCAVSRTDGIATRGGRSSGPMTPRRTTYLDPKGRGDKSMLVKRGTVEDVYAVVLQRLSDRAKTGLSASQSPGVEPHTRR
Ga0307468_1008721901	3300031740	Hardwood Forest Soil	SCLRSKACAMSRTERIASRGGRSSEQMTPRRPPDLDPKGRGDKRMVGKREAAEDVYAVVLQRLSDMAKTALFEP
Ga0306919_104057571	3300031879	Soil	VELAKWTLPIISRSREPYEVKVCAVSRTDGIATRGGRSSGFMTPRRTTDLDPKGRGDKSMLVKQGTAEDVYTVVLQRLSDRAKTALFEPQSPGVEPHTRR
Ga0318544_103265091	3300031880	Soil	PDDKGRITEEPCAIKVCAVSRTDGIATRGGRSSGFMTPRRTTDLDPKGRGDKSMLVKQGTAEDVYAVVLQRLSDRAKTALFEPQSPGVEPHTRR
Ga0315285_101077704	3300031885	Sediment	MYSSEEGEQSSSPDEGKPCAVSRTERIATGGGRSSGQMTPRRTTNLDSKGRVDKSMFVKRGTAEDVYGVALQRLSDMAKAGLPESQCPVVESHTHW
Ga0306920_1014895102	3300032261	Soil	MCENAQAAGIGTLDVVKACAVSRTDGIATRGGRSSGPMTPRRTTDLDPKGRGDKSMLGKRGTVEDVYAVVLQRLSDRAKTGLFEPQSPGVEPHTRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081143

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences