Metagenome / Metatranscriptome Family F081173

Basic Information
Family ID	F081173
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	50 residues
Representative Sequence	MNEKTIDQIEQEVLSYEVSDEAVEAAGTRTEIAGAWTVVCTGIQCPG
Number of Associated Samples	92
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	71.05 %
% of genes near scaffold ends (potentially truncated)	34.21 %
% of genes from short scaffolds (< 2000 bps)	93.86 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.15

Most Common Taxonomy
Group	Unclassified (69.298 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.947 % of family members)
Environment Ontology (ENVO)	Unclassified (28.947 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.158 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 6.67% β-sheet: 1.33% Coil/Unstructured: 92.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF13396	PLDc_N	1.75
PF00953	Glycos_transf_4	1.75
PF02687	FtsX	0.88
PF13575	DUF4135	0.88
PF09851	SHOCT	0.88
PF00027	cNMP_binding	0.88
PF00815	Histidinol_dh	0.88
PF01070	FMN_dh	0.88
PF00078	RVT_1	0.88
PF00216	Bac_DNA_binding	0.88
PF03625	DUF302	0.88
PF01610	DDE_Tnp_ISL3	0.88
PF03734	YkuD	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0472	UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase	Cell wall/membrane/envelope biogenesis [M]	1.75
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.88
COG0141	Histidinol dehydrogenase	Amino acid transport and metabolism [E]	0.88
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.88
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.88
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.88
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.88
COG3439	Uncharacterized conserved protein, DUF302 family	Function unknown [S]	0.88
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.88

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.30 %
All Organisms	root	All Organisms	30.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.30 %
cellular organisms	root	All Organisms → cellular organisms	30.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.30 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	30.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.30 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	12.28 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	12.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.30 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	12.28 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6.14 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.30 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.28 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.39 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.30 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.28 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.75 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.30 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.28 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.75 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.30 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.28 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.75 %
unclassified Nitrobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.30 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.28 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.75 %
Nitrobacter sp. Nb-311A	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter → Nitrobacter sp. Nb-311A	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559006\|FI_contig20458	Not Available	703	Open in IMG/M
2189573004\|GZGWRS401CZ7HC	Not Available	534	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100377943	Not Available	766	Open in IMG/M
3300003505\|JGIcombinedJ51221_10208342	Not Available	793	Open in IMG/M
3300004114\|Ga0062593_102766439	Not Available	559	Open in IMG/M
3300004121\|Ga0058882_1609909	Not Available	501	Open in IMG/M
3300004463\|Ga0063356_105069008	Not Available	566	Open in IMG/M
3300004801\|Ga0058860_12224330	Not Available	553	Open in IMG/M
3300005165\|Ga0066869_10058941	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	694	Open in IMG/M
3300005168\|Ga0066809_10199745	Not Available	540	Open in IMG/M
3300005338\|Ga0068868_100617848	Not Available	962	Open in IMG/M
3300005364\|Ga0070673_100984925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter → Nitrobacter sp. Nb-311A	784	Open in IMG/M
3300005563\|Ga0068855_102301273	Not Available	539	Open in IMG/M
3300006041\|Ga0075023_100096027	Not Available	1017	Open in IMG/M
3300006052\|Ga0075029_100065534	Not Available	2127	Open in IMG/M
3300006102\|Ga0075015_100730439	Not Available	590	Open in IMG/M
3300006102\|Ga0075015_100881646	Not Available	542	Open in IMG/M
3300006102\|Ga0075015_100892278	Not Available	539	Open in IMG/M
3300006755\|Ga0079222_12287189	Not Available	539	Open in IMG/M
3300006881\|Ga0068865_100536918	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300006893\|Ga0073928_10403790	Not Available	999	Open in IMG/M
3300007982\|Ga0102924_1006232	All Organisms → cellular organisms → Bacteria	11269	Open in IMG/M
3300009174\|Ga0105241_11007109	Not Available	780	Open in IMG/M
3300009525\|Ga0116220_10401644	Not Available	613	Open in IMG/M
3300009698\|Ga0116216_10180630	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1295	Open in IMG/M
3300010361\|Ga0126378_11062852	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	912	Open in IMG/M
3300010379\|Ga0136449_102474945	Not Available	745	Open in IMG/M
3300010400\|Ga0134122_12678383	Not Available	550	Open in IMG/M
3300011119\|Ga0105246_11170858	Not Available	706	Open in IMG/M
3300011120\|Ga0150983_10054366	Not Available	522	Open in IMG/M
3300012089\|Ga0153924_1023957	Not Available	1220	Open in IMG/M
3300012202\|Ga0137363_11208555	Not Available	642	Open in IMG/M
3300012469\|Ga0150984_115064802	Not Available	526	Open in IMG/M
3300012951\|Ga0164300_10186092	Not Available	1005	Open in IMG/M
3300012960\|Ga0164301_10556106	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	839	Open in IMG/M
3300012961\|Ga0164302_10741659	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300012971\|Ga0126369_12471374	Not Available	605	Open in IMG/M
3300013306\|Ga0163162_13152255	Not Available	529	Open in IMG/M
3300014325\|Ga0163163_12430981	Not Available	582	Open in IMG/M
3300015374\|Ga0132255_102573219	Not Available	778	Open in IMG/M
3300016319\|Ga0182033_10676643	Not Available	902	Open in IMG/M
3300016341\|Ga0182035_11670979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	575	Open in IMG/M
3300017924\|Ga0187820_1187609	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300017933\|Ga0187801_10326772	Not Available	628	Open in IMG/M
3300017947\|Ga0187785_10211883	Not Available	849	Open in IMG/M
3300017955\|Ga0187817_10204925	Not Available	1257	Open in IMG/M
3300017995\|Ga0187816_10347328	Not Available	655	Open in IMG/M
3300019165\|Ga0184589_118796	Not Available	507	Open in IMG/M
3300019184\|Ga0184590_109307	Not Available	657	Open in IMG/M
3300019362\|Ga0173479_10246680	Not Available	783	Open in IMG/M
3300020579\|Ga0210407_10046391	All Organisms → cellular organisms → Bacteria → Proteobacteria	3238	Open in IMG/M
3300020579\|Ga0210407_10087774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2350	Open in IMG/M
3300020579\|Ga0210407_10222755	All Organisms → cellular organisms → Bacteria	1467	Open in IMG/M
3300020579\|Ga0210407_10228357	Not Available	1448	Open in IMG/M
3300020579\|Ga0210407_10958058	Not Available	654	Open in IMG/M
3300020579\|Ga0210407_10995446	Not Available	639	Open in IMG/M
3300020580\|Ga0210403_10325910	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1258	Open in IMG/M
3300020580\|Ga0210403_10809288	Not Available	744	Open in IMG/M
3300020581\|Ga0210399_10521669	Not Available	986	Open in IMG/M
3300020582\|Ga0210395_10150113	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1739	Open in IMG/M
3300020582\|Ga0210395_11296410	Not Available	533	Open in IMG/M
3300021168\|Ga0210406_10331301	All Organisms → cellular organisms → Bacteria → Proteobacteria	1231	Open in IMG/M
3300021168\|Ga0210406_10396508	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1106	Open in IMG/M
3300021168\|Ga0210406_11070558	Not Available	595	Open in IMG/M
3300021168\|Ga0210406_11196786	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300021170\|Ga0210400_11314351	Not Available	579	Open in IMG/M
3300021171\|Ga0210405_11370674	Not Available	516	Open in IMG/M
3300021178\|Ga0210408_10020990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5222	Open in IMG/M
3300021178\|Ga0210408_10301762	Not Available	1277	Open in IMG/M
3300021178\|Ga0210408_10829132	Not Available	723	Open in IMG/M
3300021420\|Ga0210394_10847131	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M
3300021420\|Ga0210394_10962323	Not Available	741	Open in IMG/M
3300021420\|Ga0210394_11353702	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300021432\|Ga0210384_11165525	Not Available	675	Open in IMG/M
3300021478\|Ga0210402_11575306	Not Available	584	Open in IMG/M
3300021478\|Ga0210402_11692023	Not Available	559	Open in IMG/M
3300021479\|Ga0210410_10176731	Not Available	1908	Open in IMG/M
3300022533\|Ga0242662_10029920	All Organisms → cellular organisms → Bacteria → Proteobacteria	1302	Open in IMG/M
3300022557\|Ga0212123_10012518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11340	Open in IMG/M
3300022724\|Ga0242665_10146703	Not Available	742	Open in IMG/M
3300022731\|Ga0224563_1000389	All Organisms → cellular organisms → Bacteria	1847	Open in IMG/M
3300022731\|Ga0224563_1010049	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300023551\|Ga0247546_105997	Not Available	518	Open in IMG/M
3300024225\|Ga0224572_1033069	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	984	Open in IMG/M
3300024227\|Ga0228598_1012337	Not Available	1698	Open in IMG/M
3300025916\|Ga0207663_10889541	Not Available	712	Open in IMG/M
3300025932\|Ga0207690_10536585	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300025932\|Ga0207690_10735881	Not Available	812	Open in IMG/M
3300025933\|Ga0207706_11474355	Not Available	556	Open in IMG/M
3300026023\|Ga0207677_11577742	Not Available	607	Open in IMG/M
3300026035\|Ga0207703_10707876	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300026116\|Ga0207674_11967642	Not Available	550	Open in IMG/M
3300026121\|Ga0207683_10240514	All Organisms → cellular organisms → Bacteria	1651	Open in IMG/M
3300027069\|Ga0208859_1020899	Not Available	745	Open in IMG/M
3300027898\|Ga0209067_10296879	Not Available	887	Open in IMG/M
3300029636\|Ga0222749_10045452	All Organisms → cellular organisms → Bacteria → Proteobacteria	1923	Open in IMG/M
3300029701\|Ga0222748_1133454	Not Available	510	Open in IMG/M
3300030494\|Ga0310037_10165618	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	996	Open in IMG/M
3300030582\|Ga0210261_1219414	Not Available	508	Open in IMG/M
3300030842\|Ga0075404_11003866	Not Available	647	Open in IMG/M
3300030862\|Ga0265753_1098553	Not Available	588	Open in IMG/M
3300031231\|Ga0170824_116068189	Not Available	694	Open in IMG/M
3300031446\|Ga0170820_16281862	Not Available	605	Open in IMG/M
3300031469\|Ga0170819_14579874	Not Available	615	Open in IMG/M
3300031708\|Ga0310686_102771668	Not Available	1840	Open in IMG/M
3300031871\|Ga0316036_119946	Not Available	500	Open in IMG/M
3300031890\|Ga0306925_11269861	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	734	Open in IMG/M
3300031890\|Ga0306925_11881860	Not Available	570	Open in IMG/M
3300032076\|Ga0306924_11789709	Not Available	641	Open in IMG/M
3300032180\|Ga0307471_101989029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	729	Open in IMG/M
3300032261\|Ga0306920_100020666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9175	Open in IMG/M
3300032261\|Ga0306920_100994256	All Organisms → cellular organisms → Bacteria → Proteobacteria	1222	Open in IMG/M
3300032515\|Ga0348332_10678360	Not Available	1049	Open in IMG/M
3300032515\|Ga0348332_11480095	Not Available	938	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.70%
Host-Associated	Host-Associated	19.30%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.30%
Plants	Host-Associated → Plants	17.54%
Aquatic	Environmental → Aquatic	11.40%
Human	Host-Associated → Human	0.88%
Fungi	Host-Associated → Fungi	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.54%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.89%
Sediment	Environmental → Aquatic → Sediment	5.26%
Freshwater	Environmental → Aquatic → Freshwater	3.51%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.63%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.75%
Digestive System	Host-Associated → Human → Digestive System	0.88%
Roots	Host-Associated → Plants → Roots	0.88%
Mycelium	Host-Associated → Fungi → Mycelium	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.28%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.02%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.26%
Loam	Environmental → Terrestrial → Soil → Loam	4.39%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.39%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.51%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.63%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.75%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.88%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.88%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.88%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.88%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.60%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.18%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.02%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.39%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.51%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.51%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.63%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.75%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.88%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.88%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.88%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.14%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.26%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.51%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.51%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.51%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.75%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.75%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.88%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.88%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.88%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.88%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.88%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.88%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.88%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559006	Grass soil microbial communities from Rothamsted Park, UK - FI (heavy metals 2g/kg) assembled	Environmental	Open in IMG/M
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012089	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ008 MetaG	Host-Associated	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300019165	Soil microbial communities from Bohemian Forest, Czech Republic ? CSA1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019184	Soil microbial communities from Bohemian Forest, Czech Republic ? CSA2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022731	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU4	Environmental	Open in IMG/M
3300023551	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSA4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027069	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF002 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030582	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO145-ARE022SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030842	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB3 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031871	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLE2 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FI_00309810	2166559006	Grass Soil	MNEKIIDQFEDEVLSYEVSDEALESAGATEIAGAWTVVCTGIQCPG
FG2_09614700	2189573004	Grass Soil	MNEKTIDQIEEEVLSYEASDEAAEAAGTTEIAGAWTFVCTGVE
INPhiseqgaiiFebDRAFT_1003779432	3300000364	Soil	MNEKTIDQFEDEVLSYEVSDEALESAGATEIAGAWTVVCTGVQCPG*
JGIcombinedJ51221_102083422	3300003505	Forest Soil	MNEKTIDQTEEVLVYEISDDAVEAAGMRTEIAGVWTFVCTGIGCNHLKQ*
Ga0062593_1027664391	3300004114	Soil	MNEKTIDQFEEVLSQEVSDEALEAAGTRTEIAGAWTVVCTGIQCPG*
Ga0058882_16099091	3300004121	Forest Soil	APLANERINAMNEKIIDQFEDEVLSYEVSDEALESAGATEIAGAWTVVCTGIQCPG*
Ga0063356_1050690081	3300004463	Arabidopsis Thaliana Rhizosphere	MNEKTIEQSEVVLSQEVSDEALEAAGNRTEIAGAWTNICTGVQCPG*
Ga0058860_122243301	3300004801	Host-Associated	MNEKTLDQFEEVLSQEVSDEALEAAGTRTEIAGAWTVVCTGIQCPG*
Ga0066869_100589412	3300005165	Soil	MNEKTIDQIECEISDEAVEAAGTSEIAGVWTFICTGIQCGQVFALKQ*
Ga0066809_101997451	3300005168	Soil	MNEKSIDQIEEEVLIYEISDEAVEAAGTRTEIAGVWTFVCTGGIECNRVFALKQ*
Ga0068868_1006178482	3300005338	Miscanthus Rhizosphere	MNEKTIEQSEVVLNQEVSDEALEAAGNRTEIAGAWTNICTGVQCPG*
Ga0070673_1009849252	3300005364	Switchgrass Rhizosphere	MNEKTFAEIEQEILTHEISDEAVEAAGTTSEIAQAWTFVCSGIQCHEVFD*
Ga0068855_1023012731	3300005563	Corn Rhizosphere	KTIDQFEEVLSQEVSDEALEAAGTRTEIAGAWTVVCTGIQCPG*
Ga0075023_1000960272	3300006041	Watersheds	MNEKIIDQFEDEVLSYEVSDEALESAGATEIAGAWTVVCTGIQCPG*
Ga0075029_1000655342	3300006052	Watersheds	MNEKIIDQFEDEVLSYEVSDEALESAGASEIAGAWTVVCTGIQCPG*
Ga0075015_1007304392	3300006102	Watersheds	MNEKTIDQIEEEALIREISDEAVEAAGTRAEIAGVWTFVCTGIECGHLFALKQ*
Ga0075015_1008816462	3300006102	Watersheds	MNEKTIDQIEEEVLSYEVSDEAVEAAGTTEIAGAWTFVCTGIECNHSAA*
Ga0075015_1008922782	3300006102	Watersheds	MNEKSIDQSEEEVLICKISDEAVEAAGTRTEIAGVWTFICTGIQCGQVFALKQ*
Ga0079222_122871891	3300006755	Agricultural Soil	MNEKTIEQSELVLSQEVSDEALEAAGNRTEIAGAWTNICTGVQCPG*
Ga0068865_1005369182	3300006881	Miscanthus Rhizosphere	MNEKTIDQFEEVLSQEVSDEALEAAGNRTEIAGAWTNICTGVQCPG*
Ga0073928_104037901	3300006893	Iron-Sulfur Acid Spring	MNEKTIDQIEEEVLIHEISDEAVEAAGTRTEIAGVWTFVCTGIQCGHLFALKQ*
Ga0102924_100623214	3300007982	Iron-Sulfur Acid Spring	VNEKTIDQIEEVVICEISNEAVEAAGRTEIAGVWTFVCTGIQCGHLFALKQ*
Ga0105241_110071091	3300009174	Corn Rhizosphere	MNEKTIETAETLVNKEVSDEALEAAGTRTEIAGAWTVVCTGIQCPG*
Ga0116220_104016442	3300009525	Peatlands Soil	KIIDQFEDEVLSYEVSDEALESAGATEIAGAWTVVCTGIQCPG*
Ga0116216_101806303	3300009698	Peatlands Soil	MNEKTIDQIEEEVLIHEISDEAVEAAGTRTEIAGVWTFVCTSKHCSHPFALKQ*
Ga0126378_110628522	3300010361	Tropical Forest Soil	MIEKVIDGIKEEVLIHETSDEAVEAAGARIEIAGAWTFVCTGIQCNRTADKVKATG*
Ga0136449_1024749451	3300010379	Peatlands Soil	VEKTAQRINAMNEKTVDQIEEEVLICEISDEAVEAAGTRTEIAGVWTFVCTGIECNHLFALKQ*
Ga0134122_126783831	3300010400	Terrestrial Soil	MNEKTIEQSEVVLSQEVSDEVLEAAGNRTEIAGAWTNICTGVQCPG*
Ga0105246_111708583	3300011119	Miscanthus Rhizosphere	MNEKTFAEIEQEVLTYEISDEAVEAAGTTGEIAQAWTFVCSGIQCHEVF
Ga0150983_100543661	3300011120	Forest Soil	MNEKTIDQIEEEVLSYKVSDEAVEAAGTRTEIAGAWTFICTGIQCNHTVPMCRTEGG*
Ga0153924_10239571	3300012089	Attine Ant Fungus Gardens	MSEKTIDQFEEVLSQEVSDEALEAAGTRTEIAGAWTVVCTGIQCPG*
Ga0137363_112085552	3300012202	Vadose Zone Soil	MNEKSIDQIEEEVVIYEISDEAVEAAGTRTEIAGAWTFICTGIQCNHTVPMCRTEGG*
Ga0150984_1150648021	3300012469	Avena Fatua Rhizosphere	MNEKTIDQFEDDVLSYEVSDEALESAGATEIAGAWTVVCTGIQCPG*
Ga0164300_101860922	3300012951	Soil	MPAPLANERINAMNEKTIDQFEDEVLSYEVSDEALESAGATEIAGAWTVVCTGIQCPG*
Ga0164301_105561063	3300012960	Soil	EKTIDQTEEALVYEISDEAVEAAGTRAEIAGVWTFVCTSKHCSHPFALKQ*
Ga0164302_107416591	3300012961	Soil	NEKSIDQIEEEVVIDEISDEAVEAAGTRAEIAGVWTFVCTSKHCSHPFALKQ*
Ga0126369_124713741	3300012971	Tropical Forest Soil	MNEKTIDQFEEVLSQEVSDEALEAAGTQTEIAGAWTVVCTGIQCPG*
Ga0163162_131522552	3300013306	Switchgrass Rhizosphere	APLANERINAMNEKTIEQSEVVLSQEVSDEALEAAGNRTEIAGAWTNICTGVQCPG*
Ga0163163_124309811	3300014325	Switchgrass Rhizosphere	MNEKTFAEIEQEVLTYEISDEAVEAAGTTGEIAQAWTFVCSGIQCHEVFD*
Ga0132255_1025732191	3300015374	Arabidopsis Rhizosphere	MNEIDQIEQDAISYEVSDEAMEVAGTRTESAGAWTFVCTGIGCKW*
Ga0182033_106766432	3300016319	Soil	MNEKTIDQFEEVLSQEVSDEALEAAGTRTEIAGAWTIVCTGIQCPG
Ga0182035_116709791	3300016341	Soil	KDQSVNETMDQIEEDEISDEALEATGAQTEIAGAWTFVCTGIQCGHVFH
Ga0187820_11876091	3300017924	Freshwater Sediment	NEKTIDQIEEEVLSYEVSDEAVEAAGTRTEIAGVWTFVCTGIGCNHLFALKQ
Ga0187801_103267722	3300017933	Freshwater Sediment	MNEKTIDQIEQEVLSYEVSDEAVEAAGTRTEIAGAWTVVCTGIQCPG
Ga0187785_102118832	3300017947	Tropical Peatland	MNEKTIDQFENEVLSNEVSDEALESAGATEIAGAWTVVCTGVQCPG
Ga0187817_102049252	3300017955	Freshwater Sediment	LRFKNMNEKSIDQIEEEVVIYEISDEAVEAAGTRAEIAGVWTFICTGIGCNHLFALKQ
Ga0187816_103473281	3300017995	Freshwater Sediment	MNEKTIDQIEEEVLSYEVSDEAVEAAGTRTEIAGVWTFVCTGIGCNHLKQ
Ga0184589_1187961	3300019165	Soil	MNEKTIDQFEDEVLSYEVSDEALESAGATEIAGAWTVVCTGIQCPG
Ga0184590_1093072	3300019184	Soil	MNEKTIDQIECEISDEAVEAAGTSEIAGVWTFICTGIQCGQVF
Ga0173479_102466802	3300019362	Soil	MNEKTIDQFEEVLSQEVSDEALEAAGTRTEIAGAWTVVCTGIQCPG
Ga0210407_100463912	3300020579	Soil	MNEKTIDQIECEISDEAVEAAGTSEIAGVWTFICTGIQCGQVFALKQ
Ga0210407_100877742	3300020579	Soil	LAFPLRFKNMNEKSIDQTEEVLIYEISDEAVEAAGTSAEIAGVWTFICTGIQCGQVFALK
Ga0210407_102227552	3300020579	Soil	MNEKTIDQIEEEVLSYKVSDEAVEAAGTRTEIAGAWTFICTGIQCNHTVPMCRTEGG
Ga0210407_102283572	3300020579	Soil	MNEKTIDQTEEVLVYEISDDAVEAAGMRTEIAGVWTFVCTGIGCNHLKQ
Ga0210407_109580581	3300020579	Soil	MNEKTIDQIEEEALIREISDEAVEAAGTRTEIAGMWTFVCTGIECHHLFALKQ
Ga0210407_109954461	3300020579	Soil	MNEKTIDQIEEEVLSYEVYDEAVEAAGTRTEIAGAWTFICTGIQCNHTVPMCRTEGG
Ga0210403_103259102	3300020580	Soil	MNEKSIDQIEEEVLIYEISDEAVEAAGTRTEIAGMWTFVCTGIECHHLFALKQ
Ga0210403_108092881	3300020580	Soil	MNEKSIDQIEEVLICEISDETVEAAGTRTEIAGVWTFVCTGIQCSHLFALKQ
Ga0210399_105216692	3300020581	Soil	PLANERINAMNEKIIDQFEDEVLSYEVSDEALESAGATEIAGAWTVVCTGIQCPG
Ga0210395_101501131	3300020582	Soil	MNEKSIDQTEEVLIYEISDEAVEAAGTSAEIAGVWTFICTGIQCGQVFALKQ
Ga0210395_112964101	3300020582	Soil	MNEKTIDQIEEEVLICEISDEAVEAAGTTTEIAGVWTFVCTSKHC
Ga0210406_103313011	3300021168	Soil	MNEKTIDQIEEEVLSYEVYDEAIEAAGTRTEIAGAWTFICTGIQCNHTVPMCRTEGG
Ga0210406_103965082	3300021168	Soil	MNEKSIDQIEEEVLIYEISDEAVEAAGTRTEIAGVWTFVCTGGIECNRVFALKQ
Ga0210406_110705581	3300021168	Soil	MNEKAIDQIEEVLIYEISDEAVEAAGARAEIAGVWTFVCTGIQCGVCR
Ga0210406_111967862	3300021168	Soil	INAMNEKTIDQIEEEVLICEISDEAVEAAGTRAEIAGVWTFVCTGIGCNHLFALKQ
Ga0210400_113143512	3300021170	Soil	MNEKTIDQIEEEVLICEISDEAVEAAGTRTEIAGVWTFVCTGGIECDRV
Ga0210405_113706741	3300021171	Soil	MNEKTIDQIEEEALIREISDEAVEAAGTRTEIAGMWTFVCTGIECH
Ga0210408_100209903	3300021178	Soil	MNEKAIDQIEEVLIYEISDEAVEAAGARAEIAGVWTFVCTGIQCGVCRVPQEQVVSPA
Ga0210408_103017621	3300021178	Soil	MNEKTIDQIEEEVLICEISDEAVEAAGTRTEIAGVWTFVCTGIECNHLLALKQ
Ga0210408_108291321	3300021178	Soil	MNEKSIDQIEEEIVIYEISDEAVEAAGTRAEIAGVWTFICTGIQCGQVFALKQ
Ga0210394_108471311	3300021420	Soil	IEEEVLIYEISDEAVEAAGTRTEIAGVWTFVCTSKHCSHPFALNQ
Ga0210394_109623231	3300021420	Soil	MNEKSIDQIEEEVLICEISDEAVEAAGTRTEIAGVWTFVCTGIECNHLLALKQ
Ga0210394_113537021	3300021420	Soil	MNEKTIDQIEEEVLICEISDEAVEAAGTRAEIAGVWTFVCTGIGCNHLFALKQ
Ga0210384_111655251	3300021432	Soil	MNEKTIDQIEEEVLICEISDEAVEAAGTRTEIAGVWTFVCTGIQCSHLFAPKQ
Ga0210402_115753061	3300021478	Soil	MNEKTIDQIEEEVLICEICDEAVEAAGTRTEIAAVWTFICTGIQCHQVF
Ga0210402_116920231	3300021478	Soil	MNEKSIDQIEEEVLIYEISDEAVEAAGTRTEIAGVWTFVCTGGIACNRVFALKQ
Ga0210410_101767311	3300021479	Soil	MNEKSIDQIEEEVLIYEISDEAVEAAGTRTEIAGVWTFVCTSKHCSHPFALNQ
Ga0242662_100299201	3300022533	Soil	MNEKTIDQTEEVLVYEISDDAVEAAGMRTEIAGVWTFVCTGIGCNYLKQ
Ga0212123_100125182	3300022557	Iron-Sulfur Acid Spring	VNEKTIDQIEEVVICEISNEAVEAAGRTEIAGVWTFVCTGIQCGHLFALKQ
Ga0242665_101467033	3300022724	Soil	MNEKSIDQTEEVLIYEISDEAVEAAGTSAEIAGVWTFICTGIQCGQVF
Ga0224563_10003892	3300022731	Soil	MNEKTIDQIEEEVLSYKISDEAVEAAGTRTEIAGAWTFICTGIQCNHTVPMCRTEGG
Ga0224563_10100492	3300022731	Soil	MNEETIDQIECEISDEAVEAAGTSEIAGVWTFICTGIQCGQVFALKQ
Ga0247546_1059971	3300023551	Soil	MNEKSIDQIEEEVLSYKVSDEAVEAAGTRTEIAGAWTFICTGIQCNHTVPMCR
Ga0224572_10330691	3300024225	Rhizosphere	VAETTAQRINAMNEKSIDQIEEEVLIYEISDEAVEAAGTRAEIAGVWTFICTGIQCGQVFALKQ
Ga0228598_10123371	3300024227	Rhizosphere	MSEKTIDQIECEISDEAVEAAGTSEIAGVWTFICTGIQCGQVFALKQ
Ga0207663_108895411	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MNEKTFDQFEEDVLNYEISDDAMEAAGTEIAGAWTFVCSGVQCRD
Ga0207690_105365853	3300025932	Corn Rhizosphere	TIEQSEVVLSQEVSDEALEAAGNRTEIAGAWTNICTGVQCPG
Ga0207690_107358812	3300025932	Corn Rhizosphere	MNEKTIEQSEVVLSQEVSDEALEAAGNRTEIAGAWTNICTGV
Ga0207706_114743552	3300025933	Corn Rhizosphere	EQSEVVLSREVSEEALEAAGNRTEIAGAWTNICTGVQCPG
Ga0207677_115777422	3300026023	Miscanthus Rhizosphere	MNEKTIEQSEVVLNQEVSDEALEAAGNRTEIAGAWTNICTGVQCPG
Ga0207703_107078762	3300026035	Switchgrass Rhizosphere	MNEKTIDQFEEVLSQEVSDEALEAAGTRTEIAGAWTNICTGVQCPG
Ga0207674_119676422	3300026116	Corn Rhizosphere	EKTIEQSEVVLSQEVSDEALEAAGNRTEIAGAWTNICTGVQCPG
Ga0207683_102405141	3300026121	Miscanthus Rhizosphere	ANERINAMNEKTIEQSEVVLSQEVSDEALEAAGNRTEIAGAWTNICTGVQCPG
Ga0208859_10208991	3300027069	Forest Soil	NERINAMNEKIIDQFEDEVLSYEVSDEALESAGATEIAGAWTVVCTGIQCPG
Ga0209067_102968791	3300027898	Watersheds	YMLEKTIDQIEEDVLSYEVSDEAVEAAGTRAEIAGAWTFVCTGVQCRT
Ga0222749_100454525	3300029636	Soil	MNEKTIDQTEEVLVYEISDDAVEAAGMRTEIAGVWTFVCTGIGCNHLFALKQ
Ga0222748_11334541	3300029701	Soil	LPAPLANERINAMNEKIIDQFEDEVLSYEVSDEALESAGATEIAGAWTVVCTGIQCPG
Ga0310037_101656182	3300030494	Peatlands Soil	MNEKTIDQIEEEVLIHEISDEAVEAAGTRTEIAGVWTFVCTSKHCSHPFALKQ
Ga0210261_12194141	3300030582	Soil	AMNEKTIDQFEDEVLSYEVSDEALESAGATEIAGAWTVVCTGIQCPG
Ga0075404_110038662	3300030842	Soil	LLAPLANERINAMNEKIIDQFEDEVLSYEVSDEALESAGATEIAGAWTVVCTGIQCPG
Ga0265753_10985531	3300030862	Soil	MNEKIIDQFEDEVLSYEVSDEALELAGATEIAGAWTVVCTGIQCPG
Ga0170824_1160681892	3300031231	Forest Soil	DGKGSNDVNEKTIDQIEEVLICEISDEAVEAAGRAEIAGVWTFVCTGIQCGHLFSLKQ
Ga0170820_162818622	3300031446	Forest Soil	MNEKSIDQIEEEVLIYEISDEAVEAAGTRTEIAGVWTFICTGIQCGQVFALKQ
Ga0170819_145798741	3300031469	Forest Soil	MNEKTIDQFEDDVLSYEVSDEALESAGATEIAGAWTVVCTGIQCPG
Ga0310686_1027716681	3300031708	Soil	MNEKSIDQIEEEVLIYEISDEAVEAAGTRAEIAGVWTFICTGIQCGQVFALKQ
Ga0316036_1199462	3300031871	Soil	PAPLANERINAMNEKIIDQFEDEVLSYEVSDEALESAGATEIAGAWTVVCTGIQCPG
Ga0306925_112698612	3300031890	Soil	MIEKVIDGIKEEVLIHETSDEAVEAAGARIEIAGAWTFVCTGIQCNRTADKVKATG
Ga0306925_118818602	3300031890	Soil	FEEVLSQDVSDEALEAAGTRTEIAGAWTIVCTGIQCPG
Ga0306924_117897092	3300032076	Soil	ANERIDVMNEKTIDQFEEVLSQDVSDEALEAAGTRTEIAGAWTIVCTGIQCPG
Ga0307471_1019890292	3300032180	Hardwood Forest Soil	MNEKTIDQIEEEVLSYKVSDEAVEAAGTRAEIAGAWTFVCTGVQCRT
Ga0306920_1000206666	3300032261	Soil	MNEKTIDQFEEVLSQDVSDEALEAAGTRTEIAGAWTIVCTGIQCPG
Ga0306920_1009942562	3300032261	Soil	MIQKVIDGIKEEVLIHETSDEAVEAAGARIEIAGAWTFVCTGIQCNRTADKVKATG
Ga0348332_106783601	3300032515	Plant Litter	MKEKTIDQIEEEVLSYKISDEAVEAAGTRTEIAGAWTFICTGIQCNHTVPMCRTEGC
Ga0348332_114800951	3300032515	Plant Litter	MNEKSIDQIEEEVLIYEISDEAVEAAGTRAEIAGVWTFICTGIQCGQVF

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.15
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.15
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081173

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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