Metagenome / Metatranscriptome Family F081314

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F081314
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	113 residues
Representative Sequence	CAATLAVPASAGQSASSRVTLKVAGGPPFHGRVISKQPACVSNRKVLLIEVAPERAPIDYADNRTNGKGKWVFSSQLQGATVVQAKVGQSKSSGVTCRSALSPAKGL
Number of Associated Samples	95
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	46.02 %
% of genes near scaffold ends (potentially truncated)	37.72 %
% of genes from short scaffolds (< 2000 bps)	86.84 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (62.281 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (23.684 % of family members)
Environment Ontology (ENVO)	Unclassified (27.193 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (73.684 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.44% β-sheet: 37.78% Coil/Unstructured: 57.78%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF01592	NifU_N	21.05
PF12680	SnoaL_2	20.18
PF00990	GGDEF	12.28
PF13191	AAA_16	3.51
PF00266	Aminotran_5	3.51
PF00211	Guanylate_cyc	3.51
PF12681	Glyoxalase_2	2.63
PF00348	polyprenyl_synt	1.75
PF00535	Glycos_transf_2	0.88
PF03328	HpcH_HpaI	0.88
PF14907	NTP_transf_5	0.88
PF05199	GMC_oxred_C	0.88
PF12802	MarR_2	0.88
PF13489	Methyltransf_23	0.88
PF00005	ABC_tran	0.88
PF13439	Glyco_transf_4	0.88
PF00327	Ribosomal_L30	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0822	Fe-S cluster assembly scaffold protein IscU, NifU family	Posttranslational modification, protein turnover, chaperones [O]	21.05
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	3.51
COG0142	Geranylgeranyl pyrophosphate synthase	Coenzyme transport and metabolism [H]	1.75
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	0.88
COG1841	Ribosomal protein L30/L7E	Translation, ribosomal structure and biogenesis [J]	0.88
COG2301	Citrate lyase beta subunit	Carbohydrate transport and metabolism [G]	0.88
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.88
COG3836	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	Carbohydrate transport and metabolism [G]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.28 %
Unclassified	root	N/A	37.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.28 %
Unclassified	root	N/A	37.72 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.28 %
Unclassified	root	N/A	37.72 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	41.23 %
Unclassified	root	N/A	37.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.88 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	41.23 %
Unclassified	root	N/A	37.72 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.72 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	24.56 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.51 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	2.63 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.88 %
Candidatus Eisenbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.72 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	21.93 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	2.63 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.75 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.75 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.88 %
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.72 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	21.93 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	2.63 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1.75 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.75 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.88 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.72 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	21.93 %
unclassified Rubrobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae	2.63 %
Phycicoccus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus	1.75 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.75 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.88 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.72 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	21.93 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	2.63 %
unclassified Phycicoccus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus → unclassified Phycicoccus	1.75 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.75 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.88 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.72 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	21.93 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	2.63 %
Phycicoccus sp. CSK15P-2	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus → unclassified Phycicoccus → Phycicoccus sp. CSK15P-2	1.75 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.75 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.88 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_100844906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	3722	Open in IMG/M
3300000956\|JGI10216J12902_120158782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	740	Open in IMG/M
3300000956\|JGI10216J12902_121646012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1129	Open in IMG/M
3300001686\|C688J18823_10185820	Not Available	1410	Open in IMG/M
3300002568\|C688J35102_117919606	Not Available	515	Open in IMG/M
3300002568\|C688J35102_118074560	Not Available	527	Open in IMG/M
3300002568\|C688J35102_119562447	Not Available	720	Open in IMG/M
3300002568\|C688J35102_120565164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1186	Open in IMG/M
3300004081\|Ga0063454_100681227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	770	Open in IMG/M
3300004081\|Ga0063454_101082776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	653	Open in IMG/M
3300004153\|Ga0063455_101308818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	552	Open in IMG/M
3300004156\|Ga0062589_100015889	All Organisms → cellular organisms → Bacteria	3371	Open in IMG/M
3300004157\|Ga0062590_100260946	All Organisms → cellular organisms → Bacteria	1314	Open in IMG/M
3300004157\|Ga0062590_101050105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus → unclassified Phycicoccus → Phycicoccus sp. CSK15P-2	780	Open in IMG/M
3300004479\|Ga0062595_100285707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1100	Open in IMG/M
3300004479\|Ga0062595_101505126	Not Available	621	Open in IMG/M
3300004480\|Ga0062592_100082738	All Organisms → cellular organisms → Bacteria	1912	Open in IMG/M
3300004643\|Ga0062591_100306782	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300004643\|Ga0062591_102667942	Not Available	528	Open in IMG/M
3300005146\|Ga0066817_1013885	Not Available	677	Open in IMG/M
3300005162\|Ga0066814_10122320	Not Available	505	Open in IMG/M
3300005164\|Ga0066815_10029190	Not Available	819	Open in IMG/M
3300005168\|Ga0066809_10005661	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	2202	Open in IMG/M
3300005332\|Ga0066388_100450975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1928	Open in IMG/M
3300005445\|Ga0070708_101948652	Not Available	544	Open in IMG/M
3300005457\|Ga0070662_100443675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1076	Open in IMG/M
3300005544\|Ga0070686_100607770	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300005546\|Ga0070696_101021645	Not Available	692	Open in IMG/M
3300005547\|Ga0070693_101074734	Not Available	612	Open in IMG/M
3300005713\|Ga0066905_100099579	Not Available	1969	Open in IMG/M
3300005713\|Ga0066905_101446015	Not Available	624	Open in IMG/M
3300005764\|Ga0066903_100652628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1840	Open in IMG/M
3300005844\|Ga0068862_102041563	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300005937\|Ga0081455_10008640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	10560	Open in IMG/M
3300005937\|Ga0081455_10110984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2179	Open in IMG/M
3300005937\|Ga0081455_10243551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1320	Open in IMG/M
3300005983\|Ga0081540_1002630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	14596	Open in IMG/M
3300006573\|Ga0074055_11669243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1012	Open in IMG/M
3300006574\|Ga0074056_10015591	All Organisms → cellular organisms → Bacteria	3108	Open in IMG/M
3300006574\|Ga0074056_11463087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	850	Open in IMG/M
3300006578\|Ga0074059_12124843	Not Available	522	Open in IMG/M
3300006580\|Ga0074049_10054009	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300006581\|Ga0074048_10088749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2193	Open in IMG/M
3300009012\|Ga0066710_101741056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	945	Open in IMG/M
3300009098\|Ga0105245_10080005	All Organisms → cellular organisms → Bacteria	2985	Open in IMG/M
3300009137\|Ga0066709_101523926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	963	Open in IMG/M
3300009148\|Ga0105243_10202249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1743	Open in IMG/M
3300009553\|Ga0105249_11418095	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300009789\|Ga0126307_10136994	Not Available	1956	Open in IMG/M
3300009789\|Ga0126307_10533411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	947	Open in IMG/M
3300009840\|Ga0126313_10276211	All Organisms → cellular organisms → Bacteria	1309	Open in IMG/M
3300009840\|Ga0126313_10475516	Not Available	998	Open in IMG/M
3300010036\|Ga0126305_10418551	Not Available	885	Open in IMG/M
3300010037\|Ga0126304_10613796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	733	Open in IMG/M
3300010038\|Ga0126315_10960146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	571	Open in IMG/M
3300010040\|Ga0126308_10092447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1839	Open in IMG/M
3300010041\|Ga0126312_10044732	All Organisms → cellular organisms → Bacteria	2961	Open in IMG/M
3300010042\|Ga0126314_10003504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8029	Open in IMG/M
3300010045\|Ga0126311_10645172	Not Available	842	Open in IMG/M
3300010166\|Ga0126306_10287089	Not Available	1264	Open in IMG/M
3300010166\|Ga0126306_10646527	Not Available	845	Open in IMG/M
3300010337\|Ga0134062_10771388	Not Available	512	Open in IMG/M
3300010371\|Ga0134125_10070249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3894	Open in IMG/M
3300010375\|Ga0105239_11220620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus → unclassified Phycicoccus → Phycicoccus sp. CSK15P-2	867	Open in IMG/M
3300010396\|Ga0134126_10474135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1445	Open in IMG/M
3300010397\|Ga0134124_10767166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	961	Open in IMG/M
3300010399\|Ga0134127_13562150	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300010400\|Ga0134122_10266151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1455	Open in IMG/M
3300011107\|Ga0151490_1812796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	919	Open in IMG/M
3300012201\|Ga0137365_10800863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	688	Open in IMG/M
3300012208\|Ga0137376_10517415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1035	Open in IMG/M
3300012354\|Ga0137366_10218832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1418	Open in IMG/M
3300012354\|Ga0137366_10976362	Not Available	591	Open in IMG/M
3300012360\|Ga0137375_10903066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	701	Open in IMG/M
3300012896\|Ga0157303_10250822	Not Available	540	Open in IMG/M
3300012898\|Ga0157293_10116435	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300012905\|Ga0157296_10164655	Not Available	676	Open in IMG/M
3300012907\|Ga0157283_10022891	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300012915\|Ga0157302_10112439	Not Available	876	Open in IMG/M
3300012916\|Ga0157310_10187295	Not Available	743	Open in IMG/M
3300012951\|Ga0164300_10001508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5467	Open in IMG/M
3300012958\|Ga0164299_11069152	Not Available	600	Open in IMG/M
3300012961\|Ga0164302_10049420	All Organisms → cellular organisms → Bacteria	2077	Open in IMG/M
3300012985\|Ga0164308_10130868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1821	Open in IMG/M
3300012986\|Ga0164304_10192131	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300012986\|Ga0164304_10629458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	805	Open in IMG/M
3300012989\|Ga0164305_10313319	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300013296\|Ga0157374_12586740	Not Available	535	Open in IMG/M
3300015077\|Ga0173483_10146868	Not Available	1036	Open in IMG/M
3300015242\|Ga0137412_11274177	Not Available	513	Open in IMG/M
3300015371\|Ga0132258_12952028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1180	Open in IMG/M
3300018061\|Ga0184619_10380459	Not Available	641	Open in IMG/M
3300019361\|Ga0173482_10020225	All Organisms → cellular organisms → Bacteria	1877	Open in IMG/M
3300019361\|Ga0173482_10224491	Not Available	784	Open in IMG/M
3300022880\|Ga0247792_1036032	Not Available	884	Open in IMG/M
3300025918\|Ga0207662_10255933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1151	Open in IMG/M
3300025927\|Ga0207687_10420912	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300025961\|Ga0207712_10821142	Not Available	818	Open in IMG/M
3300026023\|Ga0207677_11082921	Not Available	730	Open in IMG/M
3300028380\|Ga0268265_11618793	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300028704\|Ga0307321_1119871	Not Available	544	Open in IMG/M
3300028719\|Ga0307301_10069631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1097	Open in IMG/M
3300028720\|Ga0307317_10342419	Not Available	505	Open in IMG/M
3300028768\|Ga0307280_10066489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1153	Open in IMG/M
3300028811\|Ga0307292_10044036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1653	Open in IMG/M
3300028814\|Ga0307302_10556491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	570	Open in IMG/M
3300028819\|Ga0307296_10104839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1517	Open in IMG/M
3300028824\|Ga0307310_10321196	Not Available	757	Open in IMG/M
3300028828\|Ga0307312_10193304	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300028875\|Ga0307289_10044441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1771	Open in IMG/M
3300028885\|Ga0307304_10284687	Not Available	727	Open in IMG/M
3300032159\|Ga0268251_10431581	Not Available	577	Open in IMG/M
3300034090\|Ga0326723_0154603	Not Available	1008	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.09%
Host-Associated	Host-Associated	14.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.21%
Plants	Host-Associated → Plants	14.91%
Aquatic	Environmental → Aquatic	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.02%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.02%
Sediment	Environmental → Aquatic → Sediment	0.88%
Peat	Environmental → Terrestrial → Peat	0.88%
Phylloplane	Host-Associated → Plants → Phylloplane	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.42%
Loam	Environmental → Terrestrial → Soil → Loam	14.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.88%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.88%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	55.26%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.77%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	7.02%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.14%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.51%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	23.68%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	11.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	7.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	7.02%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.26%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.39%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.51%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	3.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.75%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.75%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.88%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.88%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.88%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005146	Soil and rhizosphere microbial communities from Laval, Canada - mgHAB	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300022880	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S106-311C-6	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1008449062	3300000956	Soil	LKGIRRLTAAIAASALAVCLAVPASADQLAVSRVTLKVAGGPPFHGRVISESPACIANRKVVLLEVAPDRGPIDLADNRTNGRGKWVFSSQLQGATVVRAKVARSKASGVICRSALSPAKRID*
JGI10216J12902_1201587822	3300000956	Soil	MRSLGRFALPPVVGICVVALAAPAVAGESAASKVTLKVRGGPPFHGRVTSKNPVCVPNRKVILLEVAPERAPIDLADNRTNGKGKWIFSSQLQGAKVVRAKVAQSKASGVVC
JGI10216J12902_1216460122	3300000956	Soil	LKGIRRATVVLAAFVCAVALTVPANADQPAVSKVTLKIAGGPPFHGRVISESPACIANRKVVLLEVSPDPGPIDLADNRTNGRGKWVFSSQLQGATVVRAKVARSKSSGVICRAGFSPSKRL*
C688J18823_101858203	3300001686	Soil	AASRVTLKVAGGPPFHGRVISKEPACIANRKVVLIEIAPDRGPIDYADNRTNGKGKWVFSSQLQGATVVQAKVAQSKASGVTCRSAFSPRKAL*
C688J35102_1179196061	3300002568	Soil	LAAPARAGKAVDSNVTLKVAGGPPFHGRVGSKDPACIPNRKVVLLEVAPNPGPIDFADNRTNGKGKWVFSSQLQGATVVRAKVTQQKAGGVTCGSARSPAKQL*
C688J35102_1180745601	3300002568	Soil	ASSRVTLKLAGGPPFHGRVISKQPACVSNRKVVLIEVAPGRGPIDYADNRTNGKGKWVFGSQLQGATVVRAKVAASKASGVLCRSGLSPAKRL*
C688J35102_1195624472	3300002568	Soil	VPAGAGQSASSRVTLKVKGGPPFHGRVISKQAACVSNRKVLLIEVAPERAPIDYADNRTNGKGKWVFSSQLQGATMVQAKVGQSKASGVTCRAAFSPAKGL*
C688J35102_1205651642	3300002568	Soil	LKGIRRAIVVVAPFVCAGALAVATSADQLAASKVTLKVAGGPPFHGRVISESPACIANRKVVLLEIAPDPGPIDYADNRTNGRGKWVFSSQLQGATVVRAKVA
Ga0063454_1006812272	3300004081	Soil	MAGILCAAALTAPAEAGQSAASRVTLKVAGGPPFHGRVISKQAACVPNRKVLLIEIAPDRGPIDYADNRTNGKGKWVFSSELQGATVVRAKVGESKASGVRCRPALSPAKAL*
Ga0063454_1010827761	3300004081	Soil	MRAKRRLAAVGAGLLCVVGLAVPAVAGKSAASRVTLKVAGGPPFHGRVTSREPACVANRKVVLIEIAPDRGPIDFADNRTNGKGKWVFSSQLQGATLVRAKVTRAKAAGVRCQSALSPAKRP*
Ga0063455_1013088182	3300004153	Soil	MAGILCAAALTAPAEAGQSAASRVTLKVAGGPPFHGRVISKQAACVPNRKVLLIEIAPDRGPIDYADNRTNGKGKWVFSSELQGATVVRAKVGESKA
Ga0062589_1000158893	3300004156	Soil	LPLLGVLCAVSLAAPAGAGQSAGSGVTLKVKRGPPFHGRVTSKEPVCVPNRKVSLLEVAPERGPIDLADNRTNGNGKWVFSSELQGATIVQAKVAQSKASGVICRSARSGAKRL*
Ga0062590_1002609463	3300004157	Soil	KSVRRPSLPLLGVLCAVSLAAPAGAGQSAGSGVTLKVKRGPPFHGRVTSKEPVCVPNRKVSLLEVAPERGPIDLADNRTNGNGKWVFSSELQGATIVQAKVAQSKASGVICRSARSGAKRL*
Ga0062590_1010501051	3300004157	Soil	MFSWARHPRRTALLVPVAGAIALASLASPAMAGHAVPSRVTLKVAGGPPFHGRVTADDPACVTNRKVLLLEVAPEPGPIDFADNRTNGKGKWVFSSQLQGATMVRAKVTGAKSGGVRCQSALSPAKQL*
Ga0062595_1002857073	3300004479	Soil	MALLAMPVAGAIALASLASPATAGHAVPSRVTLKVADGPPFHGRVTADDPACVTNRKVLLLEVAPERGPIDLADNRTNGKGKWVFSSQLQGATEVRAKVTQAKASGVRCQSALSRAKQL*
Ga0062595_1015051261	3300004479	Soil	MGSCAAGLATPASAGPGAASAVTLKVAGGPPFHGRVTSTDPACIANRKVLLIEIAPDRGPIDYADNRTNGKGKWIFSSQLQGATMVQAKVAKSKASAVDCRSARSPAKPL*
Ga0062592_1000827382	3300004480	Soil	MKSVRRPSLPLLGVLCAVSLAAPAGAGQSAGSGVTLKVKRGPPFHGRVTSKEPVCVPNRKVSLLEVAPERGPIDLADNRTNGNGKWVFSSELQGATIVQAKVAQSKASGVICRSARSGAKRL*
Ga0062591_1003067823	3300004643	Soil	MKSIRRLTLPVLGGLCALGLAAPAGAGQSAASGVTLKIKVGPPFHGRVTSTDPACIANRKVLLIEIAPDRGPIDYADNRTNGKGKWVFSSQLQGATMVQAKVAKSKASAVDCRSARSPAKPL*
Ga0062591_1026679421	3300004643	Soil	RRTSIALTPLIVAALAAPASAGEAANSAVTLKVAGGPPFHGRVTSDSPACIANRKVVLLEVAPDRVPIDLADNRTNGKGKWVFSSQLQGATVVQAKVAQSKASGVICRSALSAAKRLR*
Ga0062594_1006055941	3300005093	Soil	MGSCAAALATPASAGPGAASAVTLKVAGGPPFHGRVTSTDPACIANRKVLLIEIAPDRGPIDYADNRTNGKGKWVFSSQLQGATIVQAKVAKSK
Ga0066817_10138852	3300005146	Soil	MKSIRRLSLPLSGVLCAVSLAAPAGAGQSAGSGVTLKVKRGPPFHGRVTSKEPVCVPNRRVTLLEVAPERGPIDRADNRTNGKGKWVFSSELQGATIVQAKVAQSKASGVICRSARSGAKRL*
Ga0066814_101223201	3300005162	Soil	TMALAAMVLAAGLAAPAGAGQSASSRVTLKVASGPPFHGRVTSSQPACVSNRKVLLIEVAPEHAPIDLADNRTNGKGKWVFSSQLQGATVVQAKVGGSKASGVTCRSALSPAKAL*
Ga0066815_100291902	3300005164	Soil	MKSIRRLSLPLSGVLCAVSLAAPAGAGQSAGSGVSLKVKRGPPFHGRVTSKEPVCVPNRRVTLLEVAPERGPIDRADNRTNGKGKWVFSSELQGATIVQAKVAQSKASGVICRSARSGAKRL*
Ga0066809_100056612	3300005168	Soil	LPLSGVLCAVSLAAPAGAGQSAGSGVTLKVKRGPPFHGRVTSKEPVCVPNRRVTLLEVAPERGPIDRADNRTNGKGKWVFSSELQGATIVQAKVAQSKASGVICRSARSGAKRL*
Ga0066388_1004509753	3300005332	Tropical Forest Soil	MKVISKLSLALVILAAAVLAAPAAAGQQAVSKVTLKVRGGPPFNGRVISESPACIPNRKVVILEVAPDRGPIDFADNRTNGKGKWVFSSQLQGATVVRAKVARSKSSGIICRSAFSPSKRLR*
Ga0070708_1019486521	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRSIGRVAAPVGALICAVALAAPAGAGESASSRVTLKVAGGPPFHGRVISKQPACVSNRKVLLIEVAPEHAPIDLADNRTNGKGKWVFSSQLQGATVVQAKVAQSKASGVICRSALSPAKAL*
Ga0070662_1004436751	3300005457	Corn Rhizosphere	MGSCAAALATPASAGPGAASAVTLKVAGGPPFHGRVTSTDPACIANRKVLLIEIAPDRGPIDYADNRTNGKGKWVFSSQLQGATMVQAKVAKSKASA
Ga0070686_1006077702	3300005544	Switchgrass Rhizosphere	VFGGARNPKRTALVVVPVAGAIALASLAAPATAGPAVPSRVTLKVADGPPFHGRVTAGDPACVTNRKVLLLEVAPEPGPIDFADNRTNGKGKWVFSSQLQGATEVRAKVTQAKSGGVRCQSALSPAKRL*
Ga0070696_1010216451	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VFGGARNPKRTALVVVPVAGAIALASLAAPATAGPAVPSRVTLKVADGPPFHGRVTADDPACVTNRKVLLLEVAPEPGPIDLADNRTNGKGKWVFSSQLQGATEVRAKVTQAKAGGVRCQSALSRAKQL*
Ga0070693_1010747341	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MRAIGRFAVLLAMGSCAAGLATPASAGPGAASAVTLKVAGGPPFHGRVTSTDPACIANRKVLLIEIAPDRGPIDYADNRTNGKGKWVFSSQLQGATIVQAKVAKSKASGVDCRS
Ga0066905_1000995793	3300005713	Tropical Forest Soil	VSAFRHLKPPGWRSDYGAQMRAIRRFAVLLAMGSCAAGLAAPAGAGSGPASKVTLKVAGGPPFHGRVTSPDPACVPSRKVILIEIAPGRGPIDFADNRTNGKGKWVFSSQLQGATVVQAKVAGSKQSGVICRSAFSPAKRLR*
Ga0066905_1014460152	3300005713	Tropical Forest Soil	VKGIWKLAIPLVLVVAATALVAPAGARQQAVSAVTLKVAGGPPFHGRVTSDSPACIANRQVILLEVAPDRAPIDFADNRTNGKGKWVFSSQLQGATVVRAKVARSKSSGIICRAAFSPAKRLR*
Ga0066903_1006526281	3300005764	Tropical Forest Soil	MKAIRGLGLAAGVGISVAALVGSAGAGESASSAVTLKVAGGPPFHGRVKSKDPACVSNRKVLLIEIAPDRGPIDYADNRTNGKGKWVFSSELQGATIVQAKVGESKASGVTCRSARSRRKSL*
Ga0068862_1020415631	3300005844	Switchgrass Rhizosphere	LASLAAPATAGHAVPSRVTLKVADGPPFHGRVTADDPACVTNRKVLLLEVAPEPGPIDLADNRTNGKGKWVFSSQLQGATEVRAKVTQAKAGGVRCLSALSRAKQL*
Ga0081455_100086403	3300005937	Tabebuia Heterophylla Rhizosphere	VKGIRRISAAVAALACAVSLAGPAGADQPAVSKVTLRVAGGPPFHGRVISESPACIANRKVVLLEVAPDRGPIDYADNRTNGKGKWVFSSQLQGATVVRAKVARSKASGVSCRPAFSRAKGV*
Ga0081455_101109842	3300005937	Tabebuia Heterophylla Rhizosphere	MRAIGIFAVLLAMSSLAAGLATPASAGSGAASGVTLKVADGPPFHGRVTSADPACIPNRRVLLIEIAPDRGPIDYADNRTNGMGKWVFSSQLQGATVVQAKVAQSKASGVICRSARSPAKRVGGRAARRDPFSE*
Ga0081455_102435513	3300005937	Tabebuia Heterophylla Rhizosphere	MKVRFAMVVAVVLASVVAAPASAGQSASSRVTLKVKGGPPFHGRVISKQPACVSNRKVAILEVAPERAFIDYADNRTNGKGKWVFSSQLQGATVVQAKVAQSKSSGVTCRAALSRPKEL*
Ga0081540_10026304	3300005983	Tabebuia Heterophylla Rhizosphere	VKALWKLSVVLAMLATAALVASAGARQEAVSQVSLKVAGGPPFHGRVTSESPACIANRKVVLLEVAPDRGPIDLADNRTNGRGKWIFSSQLQGATAVRAKVARSKASGVACRAAFSPAKRLR*
Ga0074055_116692432	3300006573	Soil	MPIAAGLCMAALAIPASAGQSAASRVTLKVAGGPPFHGRVISKNPACVPNRKVLLIEISPERGPIDYADNRTNGKGKWVFSSQLQGATVVQAKVGQYKASGVTCRSAVSPAKPL*
Ga0074056_100155912	3300006574	Soil	LPLSGVLCAVSLAAPAGAGQSAGSGVTLKVKRGPPFHGRVTSKEPVCVPNRRVTLLEVAPERGPIDRADNRTNGKGKWVFSSELLGATIVQAKVAQSKASGVICRSARSGAKRL*
Ga0074056_114630872	3300006574	Soil	MPIAAGLCMAALAIPASAGQSASSRVTLKVAGGPPFHGRVISKNPACVPNRKVLLIEISPERGPIDYADNRTNGKGKWVFSSQLQGATVVQAKVGQYKASGVTCRSAVSPAKPL*
Ga0074059_121248431	3300006578	Soil	MSPRYPTLRRPTRLYRRIRKGLEMKSIRRLSLPLSGVLCAVSLAAPAGAGQSAGSGVTLKVKRGPPFHGRVTSKEPVCVPNRRVTLLEVAPERGPIDRADNRTNGKGKWVFSSELQGATIVQAKVAQSKASGVICRSARSGAKRL*
Ga0074049_100540094	3300006580	Soil	QSAGSGVTLKVKRGPPFHGRVTSKEPVCVPNRRVTLLEVAPERGPIDRADNRTNGKGKWVFSSELQGATIVQAKVAQSKASGVICRSARSGAKRL*
Ga0074048_100887492	3300006581	Soil	LPLSGVLCAVSLAAPAGAGQSAGSGVSLKVKRGPPFHGRVTSKEPVCVPNRRVTLLEVAPERGPIDRADNRTNGKGKWVFSSELQGATIVQAKVAQSKASGVICRSARSGAKRL*
Ga0066710_1017410561	3300009012	Grasslands Soil	MKAMGRISLAVTVGLCAAGLAAPAGAGQSAASRVTLKVAGGPPFHGRVISKNPACVPNRKVVLLEVAPERAPIDLADNRTNGKGKWVFSSQLQGATVVQAKVTASKSSGVSCRSALSPAKSLSG
Ga0105245_100800054	3300009098	Miscanthus Rhizosphere	MRLAATLLFGAVLALAAPATAGETASSSVTLKTTGSTAPLHGVVKSKNPSCIANRKVKVLSVSPQRGLIDFADNRTNGKGKWVFSSELQGAAVVQAKVTGQKIAGVTCRPALSPAKPLR*
Ga0066709_1015239263	3300009137	Grasslands Soil	LIACLAATALAAPASAGESAASDVSLKVKGGPPFHGRVTSKNPACIANRKVKLLSVSPERGLIDFADNRTNGKGKWVFSSQLQGARVVQAKVTEQNSGGVSCRAAL
Ga0105243_102022492	3300009148	Miscanthus Rhizosphere	MGSCAAGLATPASAGPGAASAVTLKVAGGPPFHGRVTSTDPACIANRKVLLIEIAPDRGPIDYADNRTNGKGKWVFSSQLQGATIVQAKVAKSKASGVDCRSARSPAKPL*
Ga0105249_114180951	3300009553	Switchgrass Rhizosphere	RRTALLVVPVAGAIALASLASPATAGHAVPSRVTLKVAGGPPFHGRVTADDPACVTNRKVLLLEVAPEPGPIDFADNRTNGKGKWVFSSQLQGATEVRAKVTQAKAGGVRCQSALSRAKQL*
Ga0126307_101369942	3300009789	Serpentine Soil	LKEIGRVSVALGGSVCAALAPPAGAGESASSAVTLKVAGGPPFHGRVTSKDPACISNRQVVLLAVAPDPGPIDYADNRTNGKGKWVFSSQLQGATIVRAKVASSKASGVVCRAARSPAKTVP*
Ga0126307_105334113	3300009789	Serpentine Soil	RNGDAASAGNSVASTMTLKVAGGPPSHGRVISKDPSCIVNRKVLLLEVEPDPGPIDSADNRTNGKGKWVLGSQLRGATVVRAKVLRSKSDGISCRAAFSPAKSLRG*
Ga0126313_102762112	3300009840	Serpentine Soil	MKATRRVSVAVAAALCVAGLATPADAGTSVPSGVTLKVAGGPPFHGRVISKDPACVTNRKVVLLEVAPERGPIDYADNRTNGKGKWVFGSQLQGAIVVRAKVAESKASGITCRSALSPAKSL*
Ga0126313_104755161	3300009840	Serpentine Soil	LGAGKSAASEVTLKVAGGPPFHGRVISKNPSCVANRKVKLLEVAPERALIDFADNRTNGKGKWVFSSQLQGTTVVRAKVTEQKTDGVTCRSALSPAKAL*
Ga0126305_104185512	3300010036	Serpentine Soil	LGAGKSAASEVTLKVAGGPPFHGRVISKNPSCVANRKVKLLEVAPERALIDFADNRTNGKGKWVFSSQLQGATVVRAKVTEQKTDGVTCRSALSPAKAL*
Ga0126304_106137962	3300010037	Serpentine Soil	MKATGRLSVAAVSIEHYVAGLAAPASAGESTASAVTLKVAGGPPFHGRVISKDPACVSNRKVILLEVAPERGPIDYADNRTNGKGKWVFSSQLQGATVVRAKVAESKASGVRCRSALSPAKEL*
Ga0126315_109601462	3300010038	Serpentine Soil	MKATRRVSVAVAAALCVAGLATPADAGKSVSSGVTLKVAGGPPFHGRVISKDPACVTNRKVVLLEVAPERGPIDYADNRTNGKGKWVFRSQLQGATVVRAKVAESKASGITCRSALSPAK
Ga0126308_100924471	3300010040	Serpentine Soil	MGLCVAGLAAPAGAGESTASAVTLKVAGGPPFHGRVISKDPACVSNRKVILLEVAPERGPIDYADNRTNGKGKWVFSSQLQGATVVRAKVAQSKASGVRCRSALSPAKEL*
Ga0126312_100447322	3300010041	Serpentine Soil	MPVAVVVAGALAVPAGAGQSASSRVTLKVKGGPPFHGRVISKSPACVTNRKVLLIEVAPERAPIDYADNRTNGEGKWVFSSQLQGASVVQAKVAQSKASGVICRSALSPAKGL*
Ga0126314_100035043	3300010042	Serpentine Soil	LRGRNRDAASAGNSVASTMTLKVAGGPPSHGRVISKVPSCIVDRKVLLLEVEPDPGPIDSADNRTNGKGKWVLSSQLQGATVVRAKVLRSKSDGISCRAAFSPAKSLRG*
Ga0126311_106451723	3300010045	Serpentine Soil	SASSRVTLKVKGGPPFHGRVISKSPACVTNRKVLLIEVAPERAPIDYADNRTNGEGKWVFSSQLQGASVVQAKVAQSKASGVICRSALSLAKGL*
Ga0126306_102870892	3300010166	Serpentine Soil	LRGRNRDAGSAGNSVASTVTLKVAGGPPSHGRVISKDPSCIVNRKVLLLEVEPDPGPIDSADNRTNGKGKWVLGSQLRGATVVRAKVLRSKSDGISCRAAFSRAKSLRG*
Ga0126306_106465271	3300010166	Serpentine Soil	RRLGAGKSAASEVTLKVAGGPPFHGRVISKNPSCVANRKVKLLEVAPERALIDFADNRTNGKGKWVFSSQLQGATVVRAKVTEQKTDGVTCRSALSPAKAL*
Ga0134062_107713882	3300010337	Grasslands Soil	SAVSLKVKGGPPFHGRVTSKNPACIANRKVKLLSVSPERGLIDFADNRTNGKGKWVFSSQLQGARVVQAKVTEQNSGGVSCRAALSPAKSLFS*
Ga0134125_100702494	3300010371	Terrestrial Soil	MGSCAAALATPASAGPGAASAVTLKVAGGPPFHGRVTSTDPACIANRKVLLIEIAPDRGPIDYADNRTNGKGKWVFSSQLQGATIVQAKVAKSKASGVDCRSARSPAKPL*
Ga0105239_112206202	3300010375	Corn Rhizosphere	VFGGARNPKRTALVVVPVAGAIALASLAAPATAGHAVPSRVTLKVADGPPFHGRVTADDPACVTNRKVLLLEVAPEPGPIDLADNRTNGKGKWVFSSQLQGATEVRAKVTQAKAGGVRCQSALSRAKHL*
Ga0134126_104741351	3300010396	Terrestrial Soil	MGSCAAALATPASAGPGAASAVTLKVAGGPPFHGRVTSTDPACIANRKVLLIEIAPDRGPIDYADNRTNGKGKWVFSSQLQGATMVQAKVAKSKASAVDCRSARSPAKPL*
Ga0134124_107671662	3300010397	Terrestrial Soil	HAVPSRVTLKVAGGPPFHGRVTADDPACVTNRKVLLLEVAPEPGPIDLADNRTNGKGKWVFSSQLQGATEVRAKVTQAKAGGVRCQSALSRAKQL*
Ga0134127_135621501	3300010399	Terrestrial Soil	MFQRARNPKRTALVVVPVAGAIALASLASPATAGHAVPSRVTLKVAGGPPFHGRVTADDPACVTNRKVLLLEVAPERGPIDFADNRTNGKGKWVFSSQLQGAMEVRAKVTDGMATLFEPGEATDTGVTR*
Ga0134122_102661513	3300010400	Terrestrial Soil	MGSCAAALATPASAGPGAASAVTLKVAGGPPFHGRVTSTDPACIANRKVLLIEIAPDRGPIDYADNRTNGKGKWIFSSQLQGATIVQAKVAKSKASGVDCRSARSPAKPL*
Ga0151490_18127962	3300011107	Soil	MALVWLVCAAALAVPAGAGQSAASRVTLKAAGGPPFHGRVISNQPACVSNRKVLLIEVAPERGPIDYADNRTNGKGKWVFSSQLQGATLVQAKVGESKASGVTCRSALSPAKAL*
Ga0137365_108008631	3300012201	Vadose Zone Soil	MKAIRRVFTVTAAAGLCVAGLAAPASAGGSADSRVTLKVAGGPPFHGRVISPNPACVANRKVVLLEVAPERAPIDLADNRTNGKGKWVFSSQLQGATIVRAKVAQSKSSGVTCRSALSPAKSL*
Ga0137376_105174152	3300012208	Vadose Zone Soil	MTGVLVASICAAALATPASAGQSVASRVTLKVAGGPPFHGRVISKDPACVSNRKVLLLEVAPQRGPIDYADNRTNGKGKWVFSSQLQGATVVRAKVARSKSSGVDCRSALSPAKRL*
Ga0137366_102188322	3300012354	Vadose Zone Soil	VAVVTVLCAAALAIPASAGQSASSRVTLKVAGGPPFHGRVISKEPACIANRKVVLIEVAPERAPIDSADNRTNGKGKWVFSSQLQGATVVQAKVAQSKASGVTCRSALSPAKGL*
Ga0137366_109763622	3300012354	Vadose Zone Soil	TLAAGLCVVALAAPAGAGQSAASRVTLKIAGGPPFHGRVISKSPACIANRKVLLIEIAPDRGPIDYADNRTNGKGKWVFSSQLQGATVVQAKAGQSKASGVICRAALSPAKHL*
Ga0137375_109030662	3300012360	Vadose Zone Soil	MRSIGRLVVLAAAVMCAAVLAVPAGAGQSAESKVTLKVAGGPPFHGRVISKNPACVANRKVLLIEIAPERAPIDYADNRTNGEGKWVFSSQLQGATVVQAKVGQSKSSGVTCKPALSPPKAL*
Ga0157303_102508222	3300012896	Soil	MSLAAPAGAGQSAGSGVTLKVKRGPPFHGRVTSKEPVCVPNRKVSLLEVAPERGPIDLADNRTNGNGKWVFSSELQGATIVQAKVAQSKASGVICRSARSGAKRL*
Ga0157293_101164351	3300012898	Soil	MTSIRRLSLPLLGVLCAVSLAAPAGAGQSAGSGVTLKVKRGPPFHGRVTSKEPVCVPNRKVTLLEVAPERGPIDLADNRTNGNGKWVFSSELQGATIVQAEVAQSKASGVICRSARSGAKRL*
Ga0157296_101646552	3300012905	Soil	LPLLGVLCAVSLAAPAGAGQSAGSGVTLKVKRGPPFHGRVTSKEPVCVPNRKVSLLEVAPERGPIDLADNRTNGNGKWVFSSELQGATIVQAKVAQSKASGVI
Ga0157283_100228912	3300012907	Soil	VLCAVSLAAPAGAGQSAGSGVTLKVKRGPPFHGRVTSKEPVCVPNRKVSLLEVAPERGPIDLADNRTNGNGKWVFSSELQGATIVQAKVAQSKASGVICRSARSGAKRL*
Ga0157302_101124393	3300012915	Soil	AAPAGAGQSAGSGVTLKVKRGPPFHGRVTSKEPVCVPNRKVSLLEVAPERGPIDLADNRTNGNGKWVFSSELQGATIVQAKVAQSKASGVICRSARSGAKRL*
Ga0157310_101872952	3300012916	Soil	SAGSGVTLKVKRGPPFHGRVTSKEPVCVPNRKVSLLEVAPERGPIDLADNRTNGNGKWVFSSELQGATIVQAKVAQSKASGVICRSARSGAKRL*
Ga0164300_100015083	3300012951	Soil	MAAPARAGESVASAVTLKVAGGPPFHGRVTSKDPACVANRKVVLIEVAPGRGPIDLADNRTNGEGKWVFSSQLQGATVVQAKVSRSKASGAVCRSARSAAKQL*
Ga0164299_110691521	3300012958	Soil	VAGAIALASLASPATAGHAVRSRVTLKVAGGRPFHGRVTADDPACVTNRKVLLLEVAPEPGPIDFADNRTNGKGKWVFGSQLQGATEVRAKVTQAKAGGVRCQSALSRAKQL*
Ga0164302_100494203	3300012961	Soil	MAAPARAGESVASAVTLKVAGGPPFHGRVTSKDPACVANRKVVLIEVAPGRGPIDLADNRTNGEGKWVFSSQLQGATVVQAKVSRSKASGAVCRSARSGAKRL*
Ga0164308_101308681	3300012985	Soil	MAAPARAGESVASAVTLKVAGGPPFHGRVTSKDPACVANRKVVLIEVAPGRGPIDFADNRTNGEGKWVFSSQLQGATIVQAKVAESKASGAVCRSARSGAKRL*
Ga0164304_101921312	3300012986	Soil	MSAPASAGESVASAVTLKVAGGPPFHGRVTSKDPACVANRKVVLIEVAPGRGPIDLADNRTNGEGKWVFSSQLQGATVVQAKVSRSKASGAVCRSARSAAKQL*
Ga0164304_106294582	3300012986	Soil	MFSWARDPRRTALLVVPVAGAIALASLASPATAGHAVPSRVTLKVAGGPPFHGRVTADDPACVTNRKVLLLEVAPERGPIDLADNRTNGKGKWVFSSQLQGATVVQAKVARSKSAGVICDSARSAA
Ga0164305_103133193	3300012989	Soil	MAAPARAGESVASAVTLKVAGGPPFHGRVMSKDPACVANRKVVLIEVAPGRGPIDFADNRTNGEGKWVFSSQLQGATVVQAKVSRSKASGAVCRSARSAAKQL*
Ga0157374_125867402	3300013296	Miscanthus Rhizosphere	AGEAASSSVTLKTTGSPAPLHGVVKSKNPSCIANRKVKVFSVSPQRGLIDFADNRTNGKGKWVFSSELQGAAVVQAKVTGQKIAGVTCRPALSPAKPLR*
Ga0173483_101468682	3300015077	Soil	LKVIRRTSIALTPLIVAALAAPASAGEAANSAVTLKVAGGPPFHGRVTSDSPACIANRKVVLLEVAPDRAPIDLADNRTNGKGKWVFSSQLQGATVVQAKVAQSKGSGVICRSALSAAKRLR*
Ga0137412_112741772	3300015242	Vadose Zone Soil	LAAPAGAGQSAASRVTLRVAHGPPFHGRVISKEPACVSNRKVLLIEVAPERGPIDLADNRTNGKGKWVFSSQLQAATAVQAKVAQSKASGVTCRSA
Ga0132258_129520283	3300015371	Arabidopsis Rhizosphere	VALSVPAAADQPAVSTVRLKVAGGPPFHGRVTSESPSCFANRRVILLEVAPERGPIDFADNRTNGRGKWVFSSQLQGATVVRAKVARSKASGVVCRSAVSPAKRVP*
Ga0184619_103804591	3300018061	Groundwater Sediment	GQSAASGVTLKVKGGPPFHGRVTSKEPACVPNRKVVLLEVAPERGPIDLADNRTNGRGKWVFSSQLQGATVVQAKVAESKASGVTCRSARSPAKRL
Ga0173482_100202253	3300019361	Soil	LPLLGVLCAVSLAAPAGAGQSAGSGVTLKVKRGPPFHGRVTSKEPVCVPNRKVSLLEVAPERGPIDLADNRTNGNGKWVFSSELQGATIVQAKVAQSKASGVICRSARSGAKRL
Ga0173482_102244912	3300019361	Soil	ASAGQSVASAVTLKVAGGPPFHGRVISKDPACVSDRKVLLLEIAPERGPIDYADNRTNGNGKWVFSSQLQGATVVRAKVARSKSSGVVCRSALSPPKSL
Ga0247792_10360323	3300022880	Soil	AGQSAGSGVTLKVKRGPPFHGRVTSKEPVCVPNRKVSLLEVAPERGPIDLADNRTNGNGKWVFSSELQGATIVQAKVAQSKASGVICRSARSGAKRL
Ga0207662_102559332	3300025918	Switchgrass Rhizosphere	RNPKRTALVVVPVAGAIALASLAAPATAGPAVPSRVTLKVADGPPFHGRVTAGDPACVTNRKVLLLEVAPEPGPIDFADNRTNGKGKWVFSSQLQGAMEVRAKVTQAKSGGVRCQSALSPAKRL
Ga0207687_104209122	3300025927	Miscanthus Rhizosphere	LLFGAVLALAAPATAGETASSSVTLKTTGSTAPLHGVVKSKNPSCIANRKVKVLSVSPQRGLIDFADNRTNGKGKWVFSSELQGAAVVQAKVTGQKIAGVTCRPALSPAKPLR
Ga0207712_108211421	3300025961	Switchgrass Rhizosphere	GHAVPSRVTLKVAGGPPFHGRVTADDPACVTNRKVLLLEVAPEPGPIDFADNRTNGKGKWVFSSQLQGATEVRAKVTQAKAGGVRCQSALSRAKQL
Ga0207677_110829212	3300026023	Miscanthus Rhizosphere	MGSCAAALATPASAGPGAASAVTLKVAGGPPFHGRVTSTDPACIANRKVLLIEIAPDRGPIDYADNRTNGKGKWVFSSQLQGATIVQAKVAKSKASGVDCRSARSPAKPL
Ga0268265_116187931	3300028380	Switchgrass Rhizosphere	LASLAAPATAGHAVPSRVTLKVADGPPFHGRVTADDPACVTNRKVLLLEVAPEPGPIDLADNRTNGKGKWVFSSQLQGATEVRAKVTQAKAGGVRCLSALSRAKQL
Ga0307321_11198711	3300028704	Soil	CAATLAVPASAGQSASSRVTLKVAGGPPFHGRVISKQPACVSNRKVLLIEVAPERAPIDYADNRTNGKGKWVFSSQLQGATVVQAKVGQSKSSGVTCRSALSPAKGL
Ga0307301_100696312	3300028719	Soil	MVVLGVVCAATLAVPASAGQSASSRVTLKVAGGPPFHGRVISKQPACVSNRKVLLIEVAPERAPIDYADNRTNGKGKWVFSSQLQGATVVQAKVGQSKSSGVTCRSALSPAKGL
Ga0307317_103424192	3300028720	Soil	SVASAVTLKVAGGPPFHGRVTSKDPACVANRKVVLIEVAPGRGPIDFADNRTNGEGKWVFSSQLQGATVVQAKVAESKASGAVCRSARSADKRL
Ga0307280_100664892	3300028768	Soil	MWAIRRLAMAPAGLLCAVALAVPAAAGQSATSRVTLKVKGGPPFHGRVISKEPACVANRKVVLIEIAPDRGPIDYADNRTNGKGKWVFSSELQGATVVQAKVAQSKASGVTCRSAFSQAKAL
Ga0307292_100440362	3300028811	Soil	MRRHAGRVTLKVAGGPPFHGRVISKQPACVSNRKVLLIEVAPERAPIDYADNRTNGKGKWVFSSQLQGATVVQAKVGQSKSSGVTCRSALSPAKGL
Ga0307302_105564911	3300028814	Soil	MVVLGVVCAATLAVPASAGQSASSRVTLKVAGGPPFHGRVISKQPACVSNRKVLLIEVAPERAPIDYADNRTNGKGKWVFSSQLQGATVVQAKVGQSKSSGVTCRSALS
Ga0307296_101048392	3300028819	Soil	MRWTVRFALVAVAIFAVASAVPADAGQSASSRVTLKVKGGPPFHGRVISKQAACVSNRKVLLIEVAPEHAPIDYADNRTNGKGKWVFSSQLQGATMVQAKVGQSKSSGVTCRAAFSPAKA
Ga0307310_103211961	3300028824	Soil	TSPFSLVVSIPVQAALGFSQPDRKGTGMWAIRRLAMAPAGLLCAVALAVPAAAGQSATSRVTLKVKGGPPFHGRVISKEPACVANRKVVLIEIAPDRGPIDYADNRTNGKGKWVFSSELQGATVVQAKVAQSKASGVTCRSAFSQAKAL
Ga0307312_101933042	3300028828	Soil	MWAIRRLAMAPAGLHSAVALAVPAAAGQSATSRVTLKVKGGPPFHGRVISKEPACVANRKVVLIEIAPDRGPIDYADNRTNGKGKWVFSSELQGATVVQAKVAQSKASGVTCRSAFSQAKAL
Ga0307289_100444413	3300028875	Soil	MRWTVRFAPVAVAIFAVASAVPADAGQSASSRVTLKVKGGPPFHGRVISKQAACVSNRKVLLIEVAPEHAPIDYADNRTNGKGKWVFSSQLQGATMVQAKVGQSKSSGVTCRAAFSPAKA
Ga0307304_102846872	3300028885	Soil	WAIRRLAMAPAGLLCAVALAVPAAAGQSATSRVTLKVKGGPPFHGRVISKEPACVANRKVVLIEIAPDRGPIDYADNRTNGKGKWVFSSELQGATVVQAKVAQSKASGVTCRSAFSQAKA
Ga0268251_104315812	3300032159	Agave	RKRCCLKGFGRVSVASTASALAVCLAGSASADQPAASKVTLKVAGGPPFHGRVISESPACIANRKVVLLEVEPDRGPIDLADNRTNGRGKWVFSSQLQGATVVRAKVARSKSSGVVCRSALSPAKRVG
Ga0326723_0154603_288_557	3300034090	Peat Soil	VTLKVAGGPPFHGRVISGEPACVANRKVLLIEIAPDRGPIDYADNRTNGKGKWVFSSQLQGATVVRAKVAQSKASGVTCRSALSPAKAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081314

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences